HEADER VIRAL PROTEIN 02-APR-15 4Z4R TITLE CRYSTAL STRUCTURE OF GII.10 P DOMAIN IN COMPLEX WITH 300MM FUCOSE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CAPSID PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: PROTRUDING DOMAIN, UNP RESIDUES 224-538; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NOROVIRUS GII.10; SOURCE 3 ORGANISM_TAXID: 747305; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PMBP KEYWDS FUCOSE, NOROVIRUS, PROTRUDING DOMAIN, VIRAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.D.KOROMYSLOVA,M.M.LEUTHOLD,G.S.HANSMAN REVDAT 4 10-JAN-24 4Z4R 1 HETSYN REVDAT 3 29-JUL-20 4Z4R 1 COMPND REMARK HETNAM SITE REVDAT 2 03-JUN-15 4Z4R 1 JRNL REVDAT 1 27-MAY-15 4Z4R 0 JRNL AUTH A.D.KOROMYSLOVA,M.M.LEUTHOLD,M.W.BOWLER,G.S.HANSMAN JRNL TITL THE SWEET QUARTET: BINDING OF FUCOSE TO THE NOROVIRUS JRNL TITL 2 CAPSID. JRNL REF VIROLOGY V. 483 203 2015 JRNL REFN ISSN 0042-6822 JRNL PMID 25980740 JRNL DOI 10.1016/J.VIROL.2015.04.006 REMARK 2 REMARK 2 RESOLUTION. 1.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.44 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.100 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 64050 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.141 REMARK 3 R VALUE (WORKING SET) : 0.140 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6115 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.4474 - 5.5938 0.97 3912 203 0.1438 0.1511 REMARK 3 2 5.5938 - 4.4414 0.97 3884 205 0.1170 0.1199 REMARK 3 3 4.4414 - 3.8804 0.97 3892 202 0.1170 0.1482 REMARK 3 4 3.8804 - 3.5258 0.98 3964 207 0.1284 0.1506 REMARK 3 5 3.5258 - 3.2731 0.98 3887 207 0.1451 0.1822 REMARK 3 6 3.2731 - 3.0802 0.95 3824 200 0.1435 0.1956 REMARK 3 7 3.0802 - 2.9260 0.96 3874 197 0.1424 0.1647 REMARK 3 8 2.9260 - 2.7986 0.97 3877 201 0.1443 0.1789 REMARK 3 9 2.7986 - 2.6909 0.98 3960 206 0.1431 0.1773 REMARK 3 10 2.6909 - 2.5981 0.98 3934 207 0.1417 0.1705 REMARK 3 11 2.5981 - 2.5169 0.98 3931 207 0.1392 0.1897 REMARK 3 12 2.5169 - 2.4449 0.98 3898 205 0.1395 0.1628 REMARK 3 13 2.4449 - 2.3806 0.98 3947 208 0.1378 0.1814 REMARK 3 14 2.3806 - 2.3225 0.98 3963 203 0.1393 0.1727 REMARK 3 15 2.3225 - 2.2697 0.98 3960 210 0.1369 0.1934 REMARK 3 16 2.2697 - 2.2214 0.97 3832 204 0.1343 0.1825 REMARK 3 17 2.2214 - 2.1770 0.95 3811 203 0.1442 0.1851 REMARK 3 18 2.1770 - 2.1359 0.95 3807 197 0.1413 0.1773 REMARK 3 19 2.1359 - 2.0977 0.97 3879 208 0.1458 0.1629 REMARK 3 20 2.0977 - 2.0622 0.97 3878 201 0.1411 0.1852 REMARK 3 21 2.0622 - 2.0289 0.97 3915 208 0.1540 0.2135 REMARK 3 22 2.0289 - 1.9977 0.98 3983 214 0.1483 0.2074 REMARK 3 23 1.9977 - 1.9683 0.98 3908 205 0.1444 0.1997 REMARK 3 24 1.9683 - 1.9406 0.97 3886 203 0.1492 0.2040 REMARK 3 25 1.9406 - 1.9144 0.97 3919 210 0.1520 0.1851 REMARK 3 26 1.9144 - 1.8895 0.96 3856 205 0.1513 0.1931 REMARK 3 27 1.8895 - 1.8659 0.95 3850 208 0.1555 0.1923 REMARK 3 28 1.8659 - 1.8434 0.95 3795 202 0.1590 0.2143 REMARK 3 29 1.8434 - 1.8220 0.94 3826 202 0.1677 0.2207 REMARK 3 30 1.8220 - 1.8015 0.86 3415 177 0.1837 0.2115 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.830 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 20.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 5103 REMARK 3 ANGLE : 1.433 7006 REMARK 3 CHIRALITY : 0.078 794 REMARK 3 PLANARITY : 0.008 925 REMARK 3 DIHEDRAL : 12.373 1805 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 225 THROUGH 332 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.4475 9.1204 10.9406 REMARK 3 T TENSOR REMARK 3 T11: 0.0786 T22: 0.0773 REMARK 3 T33: 0.0742 T12: -0.0099 REMARK 3 T13: -0.0165 T23: 0.0128 REMARK 3 L TENSOR REMARK 3 L11: 0.6746 L22: 1.2782 REMARK 3 L33: 1.7439 L12: -0.1547 REMARK 3 L13: -0.2597 L23: 0.2655 REMARK 3 S TENSOR REMARK 3 S11: -0.0027 S12: 0.0558 S13: 0.0357 REMARK 3 S21: -0.0631 S22: 0.0065 S23: 0.0152 REMARK 3 S31: -0.0922 S32: 0.0555 S33: -0.0032 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 333 THROUGH 354 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.4997 9.5683 35.1488 REMARK 3 T TENSOR REMARK 3 T11: 0.1605 T22: 0.1251 REMARK 3 T33: 0.1086 T12: -0.0097 REMARK 3 T13: -0.0228 T23: -0.0141 REMARK 3 L TENSOR REMARK 3 L11: 2.3466 L22: 2.0505 REMARK 3 L33: 2.8063 L12: -0.0470 REMARK 3 L13: 0.0420 L23: 0.0465 REMARK 3 S TENSOR REMARK 3 S11: 0.0315 S12: -0.4221 S13: 0.1666 REMARK 3 S21: 0.3661 S22: 0.0214 S23: -0.2273 REMARK 3 S31: -0.2475 S32: 0.1289 S33: -0.0073 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 355 THROUGH 390 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.2496 13.7568 24.8812 REMARK 3 T TENSOR REMARK 3 T11: 0.1096 T22: 0.0712 REMARK 3 T33: 0.0913 T12: 0.0285 REMARK 3 T13: 0.0231 T23: -0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.8377 L22: 1.3264 REMARK 3 L33: 1.6940 L12: 0.2824 REMARK 3 L13: 0.3914 L23: -0.1889 REMARK 3 S TENSOR REMARK 3 S11: 0.0041 S12: -0.0782 S13: 0.1190 REMARK 3 S21: 0.1242 S22: 0.0755 S23: 0.0967 REMARK 3 S31: -0.2383 S32: -0.1513 S33: -0.0753 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 391 THROUGH 455 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.7947 6.8689 6.7014 REMARK 3 T TENSOR REMARK 3 T11: 0.1016 T22: 0.1162 REMARK 3 T33: 0.0848 T12: -0.0048 REMARK 3 T13: -0.0201 T23: 0.0057 REMARK 3 L TENSOR REMARK 3 L11: 0.5722 L22: 0.7840 REMARK 3 L33: 1.0930 L12: -0.0674 REMARK 3 L13: -0.2279 L23: -0.1623 REMARK 3 S TENSOR REMARK 3 S11: -0.0345 S12: 0.1415 S13: 0.0591 REMARK 3 S21: -0.1446 S22: 0.0580 S23: 0.1098 REMARK 3 S31: -0.0759 S32: -0.1284 S33: -0.0170 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 456 THROUGH 520 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.3552 -1.8868 -3.7793 REMARK 3 T TENSOR REMARK 3 T11: 0.1606 T22: 0.1271 REMARK 3 T33: 0.0903 T12: -0.0008 REMARK 3 T13: 0.0248 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 2.4590 L22: 0.9478 REMARK 3 L33: 1.9941 L12: 0.3806 REMARK 3 L13: -0.0488 L23: 0.1550 REMARK 3 S TENSOR REMARK 3 S11: -0.0589 S12: 0.1620 S13: -0.1414 REMARK 3 S21: -0.2172 S22: 0.0585 S23: -0.1193 REMARK 3 S31: 0.1019 S32: 0.2256 S33: -0.0101 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 521 THROUGH 538 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.9052 -3.0853 -12.7502 REMARK 3 T TENSOR REMARK 3 T11: 0.2923 T22: 0.2160 REMARK 3 T33: 0.1042 T12: -0.0341 REMARK 3 T13: 0.0617 T23: -0.0373 REMARK 3 L TENSOR REMARK 3 L11: 1.9183 L22: 0.2354 REMARK 3 L33: 3.6710 L12: 0.1773 REMARK 3 L13: -0.1378 L23: -0.9082 REMARK 3 S TENSOR REMARK 3 S11: 0.0106 S12: 0.1173 S13: -0.1089 REMARK 3 S21: -0.2711 S22: 0.0152 S23: -0.0801 REMARK 3 S31: 0.1613 S32: 0.1447 S33: 0.0693 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 224 THROUGH 318 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.7647 -8.8608 23.1039 REMARK 3 T TENSOR REMARK 3 T11: 0.0985 T22: 0.0789 REMARK 3 T33: 0.0831 T12: 0.0119 REMARK 3 T13: -0.0168 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 1.7515 L22: 1.1740 REMARK 3 L33: 0.6307 L12: 0.5274 REMARK 3 L13: 0.0197 L23: -0.1046 REMARK 3 S TENSOR REMARK 3 S11: 0.0380 S12: 0.0273 S13: -0.0904 REMARK 3 S21: 0.0516 S22: -0.0065 S23: -0.0582 REMARK 3 S31: 0.0917 S32: 0.0665 S33: -0.0199 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 319 THROUGH 426 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.3622 -12.0908 27.6120 REMARK 3 T TENSOR REMARK 3 T11: 0.1006 T22: 0.0641 REMARK 3 T33: 0.0936 T12: -0.0159 REMARK 3 T13: -0.0026 T23: 0.0166 REMARK 3 L TENSOR REMARK 3 L11: 1.8170 L22: 0.9962 REMARK 3 L33: 0.8701 L12: -0.3585 REMARK 3 L13: 0.2569 L23: -0.1838 REMARK 3 S TENSOR REMARK 3 S11: 0.0060 S12: -0.0629 S13: -0.2252 REMARK 3 S21: 0.0450 S22: 0.0287 S23: 0.0668 REMARK 3 S31: 0.1035 S32: -0.0437 S33: -0.0461 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 427 THROUGH 538 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.1132 0.6124 22.4854 REMARK 3 T TENSOR REMARK 3 T11: 0.0872 T22: 0.1294 REMARK 3 T33: 0.1594 T12: -0.0063 REMARK 3 T13: -0.0103 T23: -0.0071 REMARK 3 L TENSOR REMARK 3 L11: 2.1063 L22: 0.6258 REMARK 3 L33: 0.9228 L12: -0.1951 REMARK 3 L13: -0.5054 L23: 0.0700 REMARK 3 S TENSOR REMARK 3 S11: 0.0365 S12: 0.0793 S13: 0.0430 REMARK 3 S21: 0.0001 S22: 0.0020 S23: -0.2305 REMARK 3 S31: -0.0376 S32: 0.1616 S33: -0.0282 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 2846 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Z4R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 02-APR-15. REMARK 100 THE DEPOSITION ID IS D_1000208560. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-15 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : MASSIF-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.984463 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS3 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 64070 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.801 REMARK 200 RESOLUTION RANGE LOW (A) : 43.440 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.03960 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.30 REMARK 200 R MERGE FOR SHELL (I) : 0.17110 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.590 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: 3ONU REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.57 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SODIUM NITRATE, BIS-TRIS PROPANE, REMARK 280 PEG3350, PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 39.46900 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6270 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 24240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: 11.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 224 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 297 CG CD OE1 OE2 REMARK 470 GLU A 319 CG CD OE1 OE2 REMARK 470 GLU A 489 CG CD OE1 OE2 REMARK 470 ARG A 492 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 299 CG CD NE CZ NH1 NH2 REMARK 470 ASN B 344 CG OD1 ND2 REMARK 470 VAL B 346 CG1 CG2 REMARK 470 GLU B 349 CG CD OE1 OE2 REMARK 470 ASN B 351 CG OD1 ND2 REMARK 470 ASN B 405 CG OD1 ND2 REMARK 470 GLU B 489 CG CD OE1 OE2 REMARK 470 ARG B 492 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 524 CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 994 O HOH B 978 1.93 REMARK 500 O HOH A 1056 O HOH A 1057 2.04 REMARK 500 O HOH A 973 O HOH A 1017 2.14 REMARK 500 O HOH A 728 O HOH A 1038 2.16 REMARK 500 O HOH A 1064 O HOH A 1068 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 252 80.73 -152.51 REMARK 500 GLN A 260 50.18 -150.49 REMARK 500 ALA A 323 166.81 177.55 REMARK 500 GLU A 349 41.10 -102.84 REMARK 500 GLN A 384 -32.83 -138.78 REMARK 500 VAL A 529 -151.56 -123.02 REMARK 500 ASN B 252 79.53 -152.81 REMARK 500 GLN B 260 49.72 -151.06 REMARK 500 ALA B 323 167.64 179.58 REMARK 500 GLN B 384 -35.58 -140.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1090 DISTANCE = 6.65 ANGSTROMS REMARK 525 HOH B1043 DISTANCE = 6.58 ANGSTROMS DBREF 4Z4R A 224 538 UNP Q5F4T5 Q5F4T5_9CALI 224 538 DBREF 4Z4R B 224 538 UNP Q5F4T5 Q5F4T5_9CALI 224 538 SEQRES 1 A 315 SER LYS PRO PHE THR LEU PRO ILE LEU THR LEU GLY GLU SEQRES 2 A 315 LEU THR ASN SER ARG PHE PRO LEU PRO ILE ASP VAL LEU SEQRES 3 A 315 TYR THR ASN PRO ASN GLU SER ALA ILE VAL GLN CYS GLN SEQRES 4 A 315 ASN GLY ARG CYS THR LEU ASP GLY GLU LEU GLN GLY THR SEQRES 5 A 315 THR GLN LEU LEU PRO THR GLY ILE CYS ALA PHE ARG GLY SEQRES 6 A 315 LYS VAL THR GLN GLN VAL GLN ASP GLU HIS ARG GLY THR SEQRES 7 A 315 HIS TRP ASN MET THR VAL THR ASN LEU ASN GLY THR PRO SEQRES 8 A 315 PHE ASP PRO THR GLU ASP VAL PRO ALA PRO LEU GLY THR SEQRES 9 A 315 PRO ASP PHE SER GLY GLN ILE TYR GLY VAL ILE SER GLN SEQRES 10 A 315 ARG ASN THR ASN THR VAL PRO GLY GLU GLY ASN LEU PRO SEQRES 11 A 315 ALA ASN ARG ALA HIS GLU ALA VAL ILE ALA THR TYR SER SEQRES 12 A 315 PRO LYS PHE THR PRO LYS LEU GLY ASN ILE GLN PHE SER SEQRES 13 A 315 THR TRP GLU THR GLN ASP VAL SER SER GLY GLN PRO THR SEQRES 14 A 315 LYS PHE THR PRO VAL GLY LEU ALA SER VAL ASP ALA ASN SEQRES 15 A 315 SER HIS PHE ASP GLN TRP THR LEU PRO SER TYR SER GLY SEQRES 16 A 315 ALA LEU THR LEU ASN MET ASN LEU ALA PRO SER VAL ALA SEQRES 17 A 315 PRO VAL PHE PRO GLY GLU CYS LEU LEU PHE PHE ARG SER SEQRES 18 A 315 PHE ILE PRO LEU LYS GLY GLY TYR GLY ASN PRO ALA ILE SEQRES 19 A 315 ASP CYS LEU MET PRO GLN GLU TRP VAL GLN HIS LEU TYR SEQRES 20 A 315 GLN GLU SER ALA PRO SER LEU SER ASP VAL ALA LEU VAL SEQRES 21 A 315 ARG TYR VAL ASN PRO GLU THR GLY ARG THR LEU PHE GLU SEQRES 22 A 315 ALA LYS LEU HIS ARG ASN GLY PHE LEU THR VAL ALA ARG SEQRES 23 A 315 ASN SER ALA GLY PRO VAL VAL ALA PRO THR ASN GLY TYR SEQRES 24 A 315 PHE ARG PHE ASP SER TRP VAL ASN GLN PHE TYR THR LEU SEQRES 25 A 315 ALA PRO MET SEQRES 1 B 315 SER LYS PRO PHE THR LEU PRO ILE LEU THR LEU GLY GLU SEQRES 2 B 315 LEU THR ASN SER ARG PHE PRO LEU PRO ILE ASP VAL LEU SEQRES 3 B 315 TYR THR ASN PRO ASN GLU SER ALA ILE VAL GLN CYS GLN SEQRES 4 B 315 ASN GLY ARG CYS THR LEU ASP GLY GLU LEU GLN GLY THR SEQRES 5 B 315 THR GLN LEU LEU PRO THR GLY ILE CYS ALA PHE ARG GLY SEQRES 6 B 315 LYS VAL THR GLN GLN VAL GLN ASP GLU HIS ARG GLY THR SEQRES 7 B 315 HIS TRP ASN MET THR VAL THR ASN LEU ASN GLY THR PRO SEQRES 8 B 315 PHE ASP PRO THR GLU ASP VAL PRO ALA PRO LEU GLY THR SEQRES 9 B 315 PRO ASP PHE SER GLY GLN ILE TYR GLY VAL ILE SER GLN SEQRES 10 B 315 ARG ASN THR ASN THR VAL PRO GLY GLU GLY ASN LEU PRO SEQRES 11 B 315 ALA ASN ARG ALA HIS GLU ALA VAL ILE ALA THR TYR SER SEQRES 12 B 315 PRO LYS PHE THR PRO LYS LEU GLY ASN ILE GLN PHE SER SEQRES 13 B 315 THR TRP GLU THR GLN ASP VAL SER SER GLY GLN PRO THR SEQRES 14 B 315 LYS PHE THR PRO VAL GLY LEU ALA SER VAL ASP ALA ASN SEQRES 15 B 315 SER HIS PHE ASP GLN TRP THR LEU PRO SER TYR SER GLY SEQRES 16 B 315 ALA LEU THR LEU ASN MET ASN LEU ALA PRO SER VAL ALA SEQRES 17 B 315 PRO VAL PHE PRO GLY GLU CYS LEU LEU PHE PHE ARG SER SEQRES 18 B 315 PHE ILE PRO LEU LYS GLY GLY TYR GLY ASN PRO ALA ILE SEQRES 19 B 315 ASP CYS LEU MET PRO GLN GLU TRP VAL GLN HIS LEU TYR SEQRES 20 B 315 GLN GLU SER ALA PRO SER LEU SER ASP VAL ALA LEU VAL SEQRES 21 B 315 ARG TYR VAL ASN PRO GLU THR GLY ARG THR LEU PHE GLU SEQRES 22 B 315 ALA LYS LEU HIS ARG ASN GLY PHE LEU THR VAL ALA ARG SEQRES 23 B 315 ASN SER ALA GLY PRO VAL VAL ALA PRO THR ASN GLY TYR SEQRES 24 B 315 PHE ARG PHE ASP SER TRP VAL ASN GLN PHE TYR THR LEU SEQRES 25 B 315 ALA PRO MET HET EDO A 601 4 HET FUL A 602 11 HET FUL A 603 11 HET EDO B 601 4 HET EDO B 602 4 HET EDO B 603 4 HET EDO B 604 4 HET FUL B 605 11 HET FUL B 606 11 HETNAM EDO 1,2-ETHANEDIOL HETNAM FUL BETA-L-FUCOPYRANOSE HETSYN EDO ETHYLENE GLYCOL HETSYN FUL BETA-L-FUCOSE; 6-DEOXY-BETA-L-GALACTOPYRANOSE; L- HETSYN 2 FUL FUCOSE; FUCOSE; 6-DEOXY-BETA-L-GALACTOSE FORMUL 3 EDO 5(C2 H6 O2) FORMUL 4 FUL 4(C6 H12 O5) FORMUL 12 HOH *733(H2 O) HELIX 1 AA1 THR A 233 LEU A 237 5 5 HELIX 2 AA2 LEU A 279 ILE A 283 5 5 HELIX 3 AA3 VAL A 346 GLY A 350 5 5 HELIX 4 AA4 THR A 370 LEU A 373 5 4 HELIX 5 AA5 ASP A 403 HIS A 407 5 5 HELIX 6 AA6 PRO A 462 SER A 473 1 12 HELIX 7 AA7 THR B 233 LEU B 237 5 5 HELIX 8 AA8 LEU B 279 ILE B 283 5 5 HELIX 9 AA9 THR B 370 LEU B 373 5 4 HELIX 10 AB1 ASP B 403 HIS B 407 5 5 HELIX 11 AB2 PRO B 462 SER B 473 1 12 SHEET 1 AA1 4 ALA A 456 CYS A 459 0 SHEET 2 AA1 4 GLU A 437 PHE A 445 -1 N SER A 444 O ILE A 457 SHEET 3 AA1 4 VAL A 248 THR A 251 -1 N TYR A 250 O PHE A 441 SHEET 4 AA1 4 GLY A 513 VAL A 515 -1 O GLY A 513 N THR A 251 SHEET 1 AA2 6 ALA A 456 CYS A 459 0 SHEET 2 AA2 6 GLU A 437 PHE A 445 -1 N SER A 444 O ILE A 457 SHEET 3 AA2 6 PHE A 504 ALA A 508 -1 O VAL A 507 N CYS A 438 SHEET 4 AA2 6 THR A 493 HIS A 500 -1 N HIS A 500 O PHE A 504 SHEET 5 AA2 6 VAL A 480 VAL A 486 -1 N TYR A 485 O LEU A 494 SHEET 6 AA2 6 TYR A 522 VAL A 529 -1 O SER A 527 N LEU A 482 SHEET 1 AA3 8 GLY B 450 TYR B 452 0 SHEET 2 AA3 8 ALA A 354 ALA A 363 -1 N ASN A 355 O GLY B 451 SHEET 3 AA3 8 ASN A 375 THR A 380 -1 O SER A 379 N VAL A 361 SHEET 4 AA3 8 THR A 301 VAL A 307 -1 N MET A 305 O ILE A 376 SHEET 5 AA3 8 PHE A 286 VAL A 294 -1 N THR A 291 O ASN A 304 SHEET 6 AA3 8 PRO A 391 LEU A 399 -1 O THR A 392 N GLY A 288 SHEET 7 AA3 8 GLN A 333 ARG A 341 -1 N TYR A 335 O VAL A 397 SHEET 8 AA3 8 ALA A 354 ALA A 363 -1 O ILE A 362 N ILE A 334 SHEET 1 AA4 8 GLY A 450 TYR A 452 0 SHEET 2 AA4 8 ALA B 354 ALA B 363 -1 O ASN B 355 N GLY A 451 SHEET 3 AA4 8 ASN B 375 THR B 380 -1 O SER B 379 N VAL B 361 SHEET 4 AA4 8 THR B 301 VAL B 307 -1 N MET B 305 O ILE B 376 SHEET 5 AA4 8 PHE B 286 GLN B 295 -1 N VAL B 294 O HIS B 302 SHEET 6 AA4 8 PRO B 391 LEU B 399 -1 O THR B 392 N GLY B 288 SHEET 7 AA4 8 GLN B 333 ARG B 341 -1 N VAL B 337 O THR B 395 SHEET 8 AA4 8 ALA B 354 ALA B 363 -1 O ILE B 362 N ILE B 334 SHEET 1 AA5 4 ALA B 456 CYS B 459 0 SHEET 2 AA5 4 CYS B 438 PHE B 445 -1 N SER B 444 O ILE B 457 SHEET 3 AA5 4 VAL B 248 THR B 251 -1 N VAL B 248 O ARG B 443 SHEET 4 AA5 4 GLY B 513 VAL B 515 -1 O GLY B 513 N THR B 251 SHEET 1 AA6 6 ALA B 456 CYS B 459 0 SHEET 2 AA6 6 CYS B 438 PHE B 445 -1 N SER B 444 O ILE B 457 SHEET 3 AA6 6 PHE B 504 VAL B 507 -1 O VAL B 507 N CYS B 438 SHEET 4 AA6 6 THR B 493 HIS B 500 -1 N HIS B 500 O PHE B 504 SHEET 5 AA6 6 VAL B 480 VAL B 486 -1 N ALA B 481 O LEU B 499 SHEET 6 AA6 6 TYR B 522 VAL B 529 -1 O SER B 527 N LEU B 482 CRYST1 66.104 78.938 68.889 90.00 99.84 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015128 0.000000 0.002623 0.00000 SCALE2 0.000000 0.012668 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014733 0.00000