HEADER HYDROLASE 03-APR-15 4Z5Z TITLE THE 2.5-ANGSTROM CRYSTAL STRUCTURE OF MG(2+)-BOUND PQQB FROM TITLE 2 PSEUDOMONAS PUTIDA COMPND MOL_ID: 1; COMPND 2 MOLECULE: COENZYME PQQ SYNTHESIS PROTEIN B; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PYRROLOQUINOLINE QUINONE BIOSYNTHESIS PROTEIN B; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS PUTIDA (STRAIN KT2440); SOURCE 3 ORGANISM_TAXID: 160488; SOURCE 4 STRAIN: KT2440; SOURCE 5 GENE: PQQB, PP_0379; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS PQQB, PQQ, METALLO-BETA-LACTAMASE, BETA-LACTAMASE, PYRROLOQUINOLINE KEYWDS 2 QUINONE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR X.TU,C.M.WILMOT REVDAT 2 06-MAR-24 4Z5Z 1 REMARK REVDAT 1 13-APR-16 4Z5Z 0 JRNL AUTH X.TU,C.M.WILMOT JRNL TITL CRYSTAL STRUCTURES REVEAL METAL-BINDING PLASTICITY AT THE JRNL TITL 2 ACTIVE SITE OF PQQB JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 23.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.410 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 3 NUMBER OF REFLECTIONS : 13527 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.190 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 679 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 23.8948 - 4.3271 0.97 2727 130 0.1640 0.1603 REMARK 3 2 4.3271 - 3.4378 0.98 2591 123 0.1548 0.2049 REMARK 3 3 3.4378 - 3.0042 0.98 2554 139 0.1982 0.2410 REMARK 3 4 3.0042 - 2.7299 0.98 2559 128 0.2361 0.2856 REMARK 3 5 2.7299 - 2.5345 0.96 2417 159 0.2744 0.3455 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.330 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 32.09 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.56 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 2445 REMARK 3 ANGLE : 0.699 3320 REMARK 3 CHIRALITY : 0.046 357 REMARK 3 PLANARITY : 0.003 445 REMARK 3 DIHEDRAL : 12.560 898 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 0 THROUGH 70 ) REMARK 3 ORIGIN FOR THE GROUP (A): -13.3881 -13.2305 -9.7425 REMARK 3 T TENSOR REMARK 3 T11: 0.2281 T22: 0.2393 REMARK 3 T33: 0.2270 T12: -0.0064 REMARK 3 T13: -0.0079 T23: -0.0054 REMARK 3 L TENSOR REMARK 3 L11: 0.1367 L22: 0.1439 REMARK 3 L33: 0.0875 L12: -0.1376 REMARK 3 L13: 0.1235 L23: -0.1299 REMARK 3 S TENSOR REMARK 3 S11: -0.0522 S12: -0.0197 S13: 0.1108 REMARK 3 S21: 0.0024 S22: 0.0462 S23: -0.0932 REMARK 3 S31: -0.0961 S32: 0.0491 S33: 0.0000 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 71 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -27.0722 -12.8588 -5.4237 REMARK 3 T TENSOR REMARK 3 T11: 0.2439 T22: 0.1825 REMARK 3 T33: 0.1815 T12: 0.0302 REMARK 3 T13: 0.0302 T23: -0.0051 REMARK 3 L TENSOR REMARK 3 L11: 0.3719 L22: 0.3579 REMARK 3 L33: 0.1157 L12: 0.2832 REMARK 3 L13: 0.1850 L23: 0.0625 REMARK 3 S TENSOR REMARK 3 S11: 0.0029 S12: 0.2928 S13: 0.0382 REMARK 3 S21: 0.0915 S22: -0.0527 S23: 0.5007 REMARK 3 S31: 0.1165 S32: 0.0606 S33: -0.0097 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 104 THROUGH 160 ) REMARK 3 ORIGIN FOR THE GROUP (A): -34.2282 -19.3725 -12.5649 REMARK 3 T TENSOR REMARK 3 T11: 0.1917 T22: 0.2413 REMARK 3 T33: 0.2557 T12: -0.0280 REMARK 3 T13: 0.0193 T23: -0.0218 REMARK 3 L TENSOR REMARK 3 L11: 0.2485 L22: 0.3434 REMARK 3 L33: 0.5686 L12: 0.2133 REMARK 3 L13: 0.1219 L23: 0.0465 REMARK 3 S TENSOR REMARK 3 S11: 0.0209 S12: 0.0746 S13: -0.1827 REMARK 3 S21: -0.0424 S22: 0.1263 S23: 0.1948 REMARK 3 S31: 0.0422 S32: -0.1623 S33: 0.0202 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 161 THROUGH 180 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.9098 -34.0817 -15.9946 REMARK 3 T TENSOR REMARK 3 T11: 0.4949 T22: 0.2589 REMARK 3 T33: 0.4472 T12: 0.0611 REMARK 3 T13: -0.0997 T23: -0.0443 REMARK 3 L TENSOR REMARK 3 L11: 0.0241 L22: 0.0039 REMARK 3 L33: 0.0345 L12: 0.0132 REMARK 3 L13: 0.0331 L23: 0.0141 REMARK 3 S TENSOR REMARK 3 S11: 0.0052 S12: 0.0495 S13: 0.1331 REMARK 3 S21: 0.0993 S22: 0.0085 S23: 0.0967 REMARK 3 S31: 0.0949 S32: -0.1311 S33: -0.0000 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 181 THROUGH 197 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.4634 -11.4372 -26.4799 REMARK 3 T TENSOR REMARK 3 T11: 0.3849 T22: 0.2296 REMARK 3 T33: 0.3546 T12: 0.0002 REMARK 3 T13: -0.0995 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 0.6072 L22: 0.2124 REMARK 3 L33: 0.1385 L12: -0.2761 REMARK 3 L13: -0.2473 L23: 0.0613 REMARK 3 S TENSOR REMARK 3 S11: 0.2194 S12: 0.1151 S13: 0.1073 REMARK 3 S21: -0.2562 S22: -0.0328 S23: -0.2693 REMARK 3 S31: 0.4390 S32: -0.3669 S33: 0.0201 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 198 THROUGH 213 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.3843 -23.5569 -31.4408 REMARK 3 T TENSOR REMARK 3 T11: 0.6501 T22: 0.4776 REMARK 3 T33: 0.4754 T12: 0.0228 REMARK 3 T13: -0.1516 T23: -0.0234 REMARK 3 L TENSOR REMARK 3 L11: 0.0827 L22: 0.0998 REMARK 3 L33: 0.1586 L12: -0.0099 REMARK 3 L13: -0.0109 L23: -0.0502 REMARK 3 S TENSOR REMARK 3 S11: 0.0228 S12: 0.0002 S13: -0.2492 REMARK 3 S21: -0.7059 S22: 0.0509 S23: 0.1537 REMARK 3 S31: 0.3616 S32: -0.3273 S33: -0.0042 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 214 THROUGH 232 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.7443 -24.8888 -21.0661 REMARK 3 T TENSOR REMARK 3 T11: 0.3985 T22: 0.4564 REMARK 3 T33: 0.5873 T12: 0.0189 REMARK 3 T13: 0.0405 T23: -0.0508 REMARK 3 L TENSOR REMARK 3 L11: 0.2499 L22: 0.0989 REMARK 3 L33: 0.0233 L12: 0.1542 REMARK 3 L13: -0.0532 L23: -0.0223 REMARK 3 S TENSOR REMARK 3 S11: -0.0678 S12: -0.0219 S13: -0.2395 REMARK 3 S21: -0.1745 S22: 0.1790 S23: -0.2808 REMARK 3 S31: -0.0690 S32: 0.1328 S33: 0.0001 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 233 THROUGH 252 ) REMARK 3 ORIGIN FOR THE GROUP (A): -9.1351 -31.6415 -20.3797 REMARK 3 T TENSOR REMARK 3 T11: 0.6007 T22: 0.2966 REMARK 3 T33: 0.4965 T12: 0.0143 REMARK 3 T13: 0.0672 T23: -0.0894 REMARK 3 L TENSOR REMARK 3 L11: 0.1316 L22: 0.1899 REMARK 3 L33: 0.4101 L12: 0.0123 REMARK 3 L13: -0.1762 L23: -0.0228 REMARK 3 S TENSOR REMARK 3 S11: -0.0205 S12: -0.1284 S13: -0.1954 REMARK 3 S21: 0.0827 S22: -0.4109 S23: -0.2196 REMARK 3 S31: 0.0343 S32: 0.2823 S33: -0.0082 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 253 THROUGH 281 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.5653 -17.9703 -24.3175 REMARK 3 T TENSOR REMARK 3 T11: 0.4156 T22: 0.3040 REMARK 3 T33: 0.3466 T12: 0.0001 REMARK 3 T13: 0.0273 T23: -0.0071 REMARK 3 L TENSOR REMARK 3 L11: 0.1972 L22: 0.0935 REMARK 3 L33: 0.0426 L12: -0.1403 REMARK 3 L13: -0.0168 L23: 0.0038 REMARK 3 S TENSOR REMARK 3 S11: 0.1838 S12: 0.0502 S13: 0.0371 REMARK 3 S21: -0.1176 S22: -0.1083 S23: -0.1302 REMARK 3 S31: 0.0095 S32: 0.1951 S33: 0.0000 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 282 THROUGH 307 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.8512 -10.7108 -24.9087 REMARK 3 T TENSOR REMARK 3 T11: 0.3689 T22: 0.3543 REMARK 3 T33: 0.2820 T12: -0.0012 REMARK 3 T13: 0.0633 T23: 0.0646 REMARK 3 L TENSOR REMARK 3 L11: 1.4242 L22: 0.7174 REMARK 3 L33: 0.5858 L12: 0.8787 REMARK 3 L13: 0.7465 L23: 0.3102 REMARK 3 S TENSOR REMARK 3 S11: -0.1732 S12: -0.1982 S13: 0.4198 REMARK 3 S21: -0.1124 S22: 0.0184 S23: 0.0497 REMARK 3 S31: 0.1871 S32: 0.1007 S33: -0.4078 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4Z5Z COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-APR-15. REMARK 100 THE DEPOSITION ID IS D_1000208611. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-FEB-14 REMARK 200 TEMPERATURE (KELVIN) : 108 REMARK 200 PH : 6.7 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13539 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.540 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.14400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.47200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.1 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 57.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.92 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 11% PEG4000, 0.2M NACL, 1MM MGCL2, 1MM REMARK 280 MALIC ACID, 0.1M BIS-TRIS PROPANE, PH 6.7, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 53.47950 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 43.07500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 43.07500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 80.21925 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 43.07500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 43.07500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 26.73975 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 43.07500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 43.07500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 80.21925 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 43.07500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 43.07500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 26.73975 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 53.47950 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 22770 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -36.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 41 132.79 -171.26 REMARK 500 ASN A 55 136.30 68.90 REMARK 500 THR A 120 -83.13 -128.83 REMARK 500 PRO A 123 64.24 -68.71 REMARK 500 ASN A 132 57.56 35.39 REMARK 500 ALA A 197 74.37 -155.55 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 19 SG REMARK 620 2 CYS A 21 SG 103.6 REMARK 620 3 CYS A 24 SG 124.7 116.7 REMARK 620 4 ASN A 272 OD1 99.5 108.8 101.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 92 OD2 REMARK 620 2 MLT A 403 O2 156.8 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MLT A 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4Z5Y RELATED DB: PDB REMARK 900 RELATED ID: 4Z60 RELATED DB: PDB REMARK 900 RELATED ID: 4Z67 RELATED DB: PDB REMARK 900 RELATED ID: 4Z6X RELATED DB: PDB DBREF 4Z5Z A 1 303 UNP Q88QV5 PQQB_PSEPK 1 303 SEQADV 4Z5Z MET A 0 UNP Q88QV5 INITIATING METHIONINE SEQADV 4Z5Z THR A 253 UNP Q88QV5 MET 253 CONFLICT SEQADV 4Z5Z LEU A 304 UNP Q88QV5 EXPRESSION TAG SEQADV 4Z5Z GLU A 305 UNP Q88QV5 EXPRESSION TAG SEQADV 4Z5Z HIS A 306 UNP Q88QV5 EXPRESSION TAG SEQADV 4Z5Z HIS A 307 UNP Q88QV5 EXPRESSION TAG SEQRES 1 A 308 MET MET TYR ILE GLN VAL LEU GLY SER ALA ALA GLY GLY SEQRES 2 A 308 GLY PHE PRO GLN TRP ASN CYS ASN CYS VAL ASN CYS LYS SEQRES 3 A 308 GLY TYR ARG ASP GLY THR LEU LYS ALA THR ALA ARG THR SEQRES 4 A 308 GLN SER SER ILE ALA LEU SER ASP ASP GLY VAL HIS TRP SEQRES 5 A 308 ILE LEU CYS ASN ALA SER PRO ASP ILE ARG ALA GLN LEU SEQRES 6 A 308 GLN ALA PHE ALA PRO MET GLN PRO ALA ARG ALA LEU ARG SEQRES 7 A 308 ASP THR GLY ILE ASN ALA ILE VAL LEU LEU ASP SER GLN SEQRES 8 A 308 ILE ASP HIS THR THR GLY LEU LEU SER LEU ARG GLU GLY SEQRES 9 A 308 CYS PRO HIS GLN VAL TRP CYS THR ASP MET VAL HIS GLN SEQRES 10 A 308 ASP LEU THR THR GLY PHE PRO LEU PHE ASN MET LEU SER SEQRES 11 A 308 HIS TRP ASN GLY GLY LEU GLN TRP ASN ARG ILE GLU LEU SEQRES 12 A 308 GLU GLY SER PHE VAL ILE ASP ALA CYS PRO ASN LEU LYS SEQRES 13 A 308 PHE THR PRO PHE PRO LEU ARG SER ALA ALA PRO PRO TYR SEQRES 14 A 308 SER PRO HIS ARG PHE ASP PRO HIS PRO GLY ASP ASN LEU SEQRES 15 A 308 GLY LEU MET VAL GLU ASP THR ARG THR GLY GLY LYS LEU SEQRES 16 A 308 PHE TYR ALA PRO GLY LEU GLY GLN VAL ASP GLU LYS LEU SEQRES 17 A 308 LEU ALA MET MET HIS GLY ALA ASP CYS LEU LEU VAL ASP SEQRES 18 A 308 GLY THR LEU TRP GLU ASP ASP GLU MET GLN ARG ARG GLY SEQRES 19 A 308 VAL GLY THR ARG THR GLY ARG GLU MET GLY HIS LEU ALA SEQRES 20 A 308 GLN ASN GLY PRO GLY GLY THR LEU GLU VAL LEU ASP GLY SEQRES 21 A 308 PHE PRO ARG GLN ARG LYS VAL LEU ILE HIS ILE ASN ASN SEQRES 22 A 308 THR ASN PRO ILE LEU ASP GLU ASN SER PRO GLU ARG ALA SEQRES 23 A 308 GLU VAL LEU ARG ARG GLY VAL GLU VAL ALA PHE ASP GLY SEQRES 24 A 308 MET SER ILE GLU LEU LEU GLU HIS HIS HET ZN A 401 1 HET MG A 402 1 HET MLT A 403 9 HETNAM ZN ZINC ION HETNAM MG MAGNESIUM ION HETNAM MLT D-MALATE HETSYN MLT (2R)-2-HYDROXYBUTANEDIOIC ACID; 2-HYDROXY-SUCCINIC ACID FORMUL 2 ZN ZN 2+ FORMUL 3 MG MG 2+ FORMUL 4 MLT C4 H6 O5 FORMUL 5 HOH *57(H2 O) HELIX 1 AA1 CYS A 21 GLY A 30 1 10 HELIX 2 AA2 ASP A 59 ALA A 66 1 8 HELIX 3 AA3 PHE A 67 GLN A 71 5 5 HELIX 4 AA4 GLN A 90 THR A 95 1 6 HELIX 5 AA5 GLY A 96 CYS A 104 5 9 HELIX 6 AA6 THR A 111 LEU A 118 1 8 HELIX 7 AA7 PRO A 123 SER A 129 1 7 HELIX 8 AA8 ASP A 204 HIS A 212 1 9 HELIX 9 AA9 ASP A 227 ARG A 232 1 6 HELIX 10 AB1 THR A 238 GLY A 243 1 6 HELIX 11 AB2 GLY A 252 ASP A 258 1 7 HELIX 12 AB3 ASN A 274 ASP A 278 5 5 HELIX 13 AB4 SER A 281 ARG A 290 1 10 SHEET 1 AA1 7 LEU A 135 ARG A 139 0 SHEET 2 AA1 7 HIS A 106 CYS A 110 1 N HIS A 106 O GLN A 136 SHEET 3 AA1 7 ILE A 81 VAL A 85 1 N ILE A 84 O TRP A 109 SHEET 4 AA1 7 TRP A 51 CYS A 54 1 N LEU A 53 O VAL A 85 SHEET 5 AA1 7 SER A 41 SER A 45 -1 N LEU A 44 O ILE A 52 SHEET 6 AA1 7 MET A 1 GLY A 7 -1 N GLN A 4 O ALA A 43 SHEET 7 AA1 7 SER A 300 LEU A 303 -1 O ILE A 301 N ILE A 3 SHEET 1 AA2 6 LEU A 154 PRO A 160 0 SHEET 2 AA2 6 LEU A 181 ASP A 187 -1 O MET A 184 N THR A 157 SHEET 3 AA2 6 LYS A 193 ALA A 197 -1 O TYR A 196 N LEU A 183 SHEET 4 AA2 6 CYS A 216 ASP A 220 1 O LEU A 218 N PHE A 195 SHEET 5 AA2 6 ARG A 264 ILE A 268 1 O ARG A 264 N LEU A 217 SHEET 6 AA2 6 VAL A 292 VAL A 294 1 O GLU A 293 N LYS A 265 LINK SG CYS A 19 ZN ZN A 401 1555 1555 2.38 LINK SG CYS A 21 ZN ZN A 401 1555 1555 2.41 LINK SG CYS A 24 ZN ZN A 401 1555 1555 2.37 LINK OD2 ASP A 92 MG MG A 402 1555 1555 2.04 LINK OD1 ASN A 272 ZN ZN A 401 1555 1555 2.01 LINK MG MG A 402 O2 MLT A 403 1555 1555 1.93 CISPEP 1 PHE A 14 PRO A 15 0 -1.70 CISPEP 2 CYS A 104 PRO A 105 0 4.93 SITE 1 AC1 4 CYS A 19 CYS A 21 CYS A 24 ASN A 272 SITE 1 AC2 4 GLY A 11 ASP A 92 HIS A 269 MLT A 403 SITE 1 AC3 7 ALA A 10 GLY A 11 GLN A 90 HIS A 244 SITE 2 AC3 7 HIS A 269 ASN A 271 MG A 402 CRYST1 86.150 86.150 106.959 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011608 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011608 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009349 0.00000