data_4Z7B # _entry.id 4Z7B # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4Z7B pdb_00004z7b 10.2210/pdb4z7b/pdb WWPDB D_1000208744 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.db_id _pdbx_database_related.content_type PDB . 4Z3A unspecified PDB . 4Z47 unspecified PDB . 4Z7Z unspecified PDB . 4XEG unspecified PDB . 5CYS unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4Z7B _pdbx_database_status.recvd_initial_deposition_date 2015-04-07 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pozharski, E.' 1 'Malik, S.S.' 2 'Drohat, A.C.' 3 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country UK _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_id_ASTM NARHAD _citation.journal_id_CSD 0389 _citation.journal_id_ISSN 1362-4962 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 43 _citation.language ? _citation.page_first 9541 _citation.page_last 9552 _citation.title 'Thymine DNA glycosylase exhibits negligible affinity for nucleobases that it removes from DNA.' _citation.year 2015 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1093/nar/gkv890 _citation.pdbx_database_id_PubMed 26358812 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Malik, S.S.' 1 ? primary 'Coey, C.T.' 2 ? primary 'Varney, K.M.' 3 ? primary 'Pozharski, E.' 4 ? primary 'Drohat, A.C.' 5 ? # _cell.entry_id 4Z7B _cell.length_a 96.150 _cell.length_b 53.820 _cell.length_c 81.150 _cell.angle_alpha 90.00 _cell.angle_beta 95.55 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4Z7B _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'G/T mismatch-specific thymine DNA glycosylase' 23070.670 1 3.2.2.29 ? 'UNP residues 111-308' ? 2 polymer syn 'DNA (28-MER)' 8646.565 1 ? ? ? ? 3 polymer syn 'DNA (28-MER)' 8473.431 1 ? ? ? ? 4 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 5 non-polymer syn 'ACETIC ACID' 60.052 2 ? ? ? ? 6 water nat water 18.015 143 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Thymine-DNA glycosylase,hTDG' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMASFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGK YGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTET LCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIERNMDV ; ;GSHMASFNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGK YGIGFTNMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTET LCYVMPSSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIERNMDV ; A ? 2 polydeoxyribonucleotide no no ;(DC)(DA)(DG)(DC)(DT)(DC)(DT)(DG)(DT)(DA)(DC)(DG)(DT)(DG)(DA)(DG)(DC)(DG)(DA)(DT) (DG)(DG)(DA)(DC)(DA)(DG)(DC)(DT) ; CAGCTCTGTACGTGAGCGATGGACAGCT C ? 3 polydeoxyribonucleotide no yes ;(DA)(DG)(DC)(DT)(DG)(DT)(DC)(DC)(DA)(DT)(DC)(DG)(DC)(DT)(DC)(DA)(ORP)(DG)(DT) (DA)(DC)(DA)(DG)(DA)(DG)(DC)(DT)(DG) ; AGCTGTCCATCGCTCAXGTACAGAGCTG D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ALA n 1 6 SER n 1 7 PHE n 1 8 ASN n 1 9 GLY n 1 10 VAL n 1 11 SER n 1 12 GLU n 1 13 ALA n 1 14 GLU n 1 15 LEU n 1 16 LEU n 1 17 THR n 1 18 LYS n 1 19 THR n 1 20 LEU n 1 21 PRO n 1 22 ASP n 1 23 ILE n 1 24 LEU n 1 25 THR n 1 26 PHE n 1 27 ASN n 1 28 LEU n 1 29 ASP n 1 30 ILE n 1 31 VAL n 1 32 ILE n 1 33 ILE n 1 34 GLY n 1 35 ILE n 1 36 ASN n 1 37 PRO n 1 38 GLY n 1 39 LEU n 1 40 MET n 1 41 ALA n 1 42 ALA n 1 43 TYR n 1 44 LYS n 1 45 GLY n 1 46 HIS n 1 47 HIS n 1 48 TYR n 1 49 PRO n 1 50 GLY n 1 51 PRO n 1 52 GLY n 1 53 ASN n 1 54 HIS n 1 55 PHE n 1 56 TRP n 1 57 LYS n 1 58 CYS n 1 59 LEU n 1 60 PHE n 1 61 MET n 1 62 SER n 1 63 GLY n 1 64 LEU n 1 65 SER n 1 66 GLU n 1 67 VAL n 1 68 GLN n 1 69 LEU n 1 70 ASN n 1 71 HIS n 1 72 MET n 1 73 ASP n 1 74 ASP n 1 75 HIS n 1 76 THR n 1 77 LEU n 1 78 PRO n 1 79 GLY n 1 80 LYS n 1 81 TYR n 1 82 GLY n 1 83 ILE n 1 84 GLY n 1 85 PHE n 1 86 THR n 1 87 ASN n 1 88 MET n 1 89 VAL n 1 90 GLU n 1 91 ARG n 1 92 THR n 1 93 THR n 1 94 PRO n 1 95 GLY n 1 96 SER n 1 97 LYS n 1 98 ASP n 1 99 LEU n 1 100 SER n 1 101 SER n 1 102 LYS n 1 103 GLU n 1 104 PHE n 1 105 ARG n 1 106 GLU n 1 107 GLY n 1 108 GLY n 1 109 ARG n 1 110 ILE n 1 111 LEU n 1 112 VAL n 1 113 GLN n 1 114 LYS n 1 115 LEU n 1 116 GLN n 1 117 LYS n 1 118 TYR n 1 119 GLN n 1 120 PRO n 1 121 ARG n 1 122 ILE n 1 123 ALA n 1 124 VAL n 1 125 PHE n 1 126 ASN n 1 127 GLY n 1 128 LYS n 1 129 CYS n 1 130 ILE n 1 131 TYR n 1 132 GLU n 1 133 ILE n 1 134 PHE n 1 135 SER n 1 136 LYS n 1 137 GLU n 1 138 VAL n 1 139 PHE n 1 140 GLY n 1 141 VAL n 1 142 LYS n 1 143 VAL n 1 144 LYS n 1 145 ASN n 1 146 LEU n 1 147 GLU n 1 148 PHE n 1 149 GLY n 1 150 LEU n 1 151 GLN n 1 152 PRO n 1 153 HIS n 1 154 LYS n 1 155 ILE n 1 156 PRO n 1 157 ASP n 1 158 THR n 1 159 GLU n 1 160 THR n 1 161 LEU n 1 162 CYS n 1 163 TYR n 1 164 VAL n 1 165 MET n 1 166 PRO n 1 167 SER n 1 168 SER n 1 169 SER n 1 170 ALA n 1 171 ARG n 1 172 CYS n 1 173 ALA n 1 174 GLN n 1 175 PHE n 1 176 PRO n 1 177 ARG n 1 178 ALA n 1 179 GLN n 1 180 ASP n 1 181 LYS n 1 182 VAL n 1 183 HIS n 1 184 TYR n 1 185 TYR n 1 186 ILE n 1 187 LYS n 1 188 LEU n 1 189 LYS n 1 190 ASP n 1 191 LEU n 1 192 ARG n 1 193 ASP n 1 194 GLN n 1 195 LEU n 1 196 LYS n 1 197 GLY n 1 198 ILE n 1 199 GLU n 1 200 ARG n 1 201 ASN n 1 202 MET n 1 203 ASP n 1 204 VAL n 2 1 DC n 2 2 DA n 2 3 DG n 2 4 DC n 2 5 DT n 2 6 DC n 2 7 DT n 2 8 DG n 2 9 DT n 2 10 DA n 2 11 DC n 2 12 DG n 2 13 DT n 2 14 DG n 2 15 DA n 2 16 DG n 2 17 DC n 2 18 DG n 2 19 DA n 2 20 DT n 2 21 DG n 2 22 DG n 2 23 DA n 2 24 DC n 2 25 DA n 2 26 DG n 2 27 DC n 2 28 DT n 3 1 DA n 3 2 DG n 3 3 DC n 3 4 DT n 3 5 DG n 3 6 DT n 3 7 DC n 3 8 DC n 3 9 DA n 3 10 DT n 3 11 DC n 3 12 DG n 3 13 DC n 3 14 DT n 3 15 DC n 3 16 DA n 3 17 ORP n 3 18 DG n 3 19 DT n 3 20 DA n 3 21 DC n 3 22 DA n 3 23 DG n 3 24 DA n 3 25 DG n 3 26 DC n 3 27 DT n 3 28 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 204 _entity_src_gen.gene_src_common_name Human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene TDG _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample 1 28 'synthetic construct' ? 32630 ? 3 1 sample 1 28 'synthetic construct' ? 32630 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin 1 UNP TDG_HUMAN Q13569 ? 1 ;FNGVSEAELLTKTLPDILTFNLDIVIIGINPGLMAAYKGHHYPGPGNHFWKCLFMSGLSEVQLNHMDDHTLPGKYGIGFT NMVERTTPGSKDLSSKEFREGGRILVQKLQKYQPRIAVFNGKCIYEIFSKEVFGVKVKNLEFGLQPHKIPDTETLCYVMP SSSARCAQFPRAQDKVHYYIKLKDLRDQLKGIERNMDV ; 111 2 PDB 4Z7B 4Z7B ? 2 ? 1 3 PDB 4Z7B 4Z7B ? 3 ? 1 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4Z7B A 7 ? 204 ? Q13569 111 ? 308 ? 111 308 2 2 4Z7B C 1 ? 28 ? 4Z7B 1 ? 28 ? 1 28 3 3 4Z7B D 1 ? 28 ? 4Z7B 1 ? 28 ? 1 28 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4Z7B GLY A 1 ? UNP Q13569 ? ? 'expression tag' 105 1 1 4Z7B SER A 2 ? UNP Q13569 ? ? 'expression tag' 106 2 1 4Z7B HIS A 3 ? UNP Q13569 ? ? 'expression tag' 107 3 1 4Z7B MET A 4 ? UNP Q13569 ? ? 'expression tag' 108 4 1 4Z7B ALA A 5 ? UNP Q13569 ? ? 'expression tag' 109 5 1 4Z7B SER A 6 ? UNP Q13569 ? ? 'expression tag' 110 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ACY non-polymer . 'ACETIC ACID' ? 'C2 H4 O2' 60.052 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 ORP saccharide . 2-DEOXY-5-PHOSPHONO-RIBOSE ? 'C5 H11 O7 P' 214.110 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4Z7B _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.66 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.62 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 6.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '30% PEG 4000, 0.2M ammonium acetate, 0.1M sodium acetate' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector PIXEL _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'DECTRIS PILATUS 6M' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-06-11 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'SSRL BEAMLINE BL12-2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.979 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline BL12-2 _diffrn_source.pdbx_synchrotron_site SSRL # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4Z7B _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 38.95 _reflns.d_resolution_high 2.02 _reflns.number_obs 26946 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.0 _reflns.B_iso_Wilson_estimate 39.56 _reflns.pdbx_redundancy 18 # _reflns_shell.d_res_high 2.02 _reflns_shell.d_res_low 2.32 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 0.300 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all 96.8 _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs 0.06800 _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy 15.50 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4Z7B _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 26944 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 32.45 _refine.ls_d_res_high 2.02 _refine.ls_percent_reflns_obs 98.68 _refine.ls_R_factor_obs 0.1891 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.1871 _refine.ls_R_factor_R_free 0.2325 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.48 _refine.ls_number_reflns_R_free 1206 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.9476 _refine.correlation_coeff_Fo_to_Fc_free 0.9281 _refine.B_iso_mean 57.23 _refine.aniso_B[1][1] -10.6404 _refine.aniso_B[2][2] 3.1058 _refine.aniso_B[3][3] 7.5346 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 6.8993 _refine.aniso_B[2][3] 0.0000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model 4FNC _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI 0.159 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI 0.151 _refine.pdbx_overall_SU_R_Blow_DPI 0.171 _refine.pdbx_overall_SU_R_free_Blow_DPI 0.156 # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 4Z7B _refine_analyze.Luzzati_coordinate_error_obs 0.343 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1530 _refine_hist.pdbx_number_atoms_nucleic_acid 1135 _refine_hist.pdbx_number_atoms_ligand 12 _refine_hist.number_atoms_solvent 143 _refine_hist.number_atoms_total 2820 _refine_hist.d_res_high 2.02 _refine_hist.d_res_low 32.45 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function t_bond_d 0.010 ? 2.00 2851 'X-RAY DIFFRACTION' HARMONIC t_angle_deg 1.01 ? 2.00 4085 'X-RAY DIFFRACTION' HARMONIC t_dihedral_angle_d ? ? 2.00 824 'X-RAY DIFFRACTION' SINUSOIDAL t_incorr_chiral_ct ? ? ? ? 'X-RAY DIFFRACTION' ? t_pseud_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_trig_c_planes ? ? 2.00 36 'X-RAY DIFFRACTION' HARMONIC t_gen_planes ? ? 5.00 287 'X-RAY DIFFRACTION' HARMONIC t_it ? ? 20.00 2851 'X-RAY DIFFRACTION' HARMONIC t_nbd ? ? ? ? 'X-RAY DIFFRACTION' ? t_omega_torsion 3.40 ? ? ? 'X-RAY DIFFRACTION' ? t_other_torsion 21.83 ? ? ? 'X-RAY DIFFRACTION' ? t_improper_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_chiral_improper_torsion ? ? 5.00 366 'X-RAY DIFFRACTION' SEMIHARMONIC t_sum_occupancies ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_distance ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_angle ? ? ? ? 'X-RAY DIFFRACTION' ? t_utility_torsion ? ? ? ? 'X-RAY DIFFRACTION' ? t_ideal_dist_contact ? ? 4.00 3036 'X-RAY DIFFRACTION' SEMIHARMONIC # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 14 _refine_ls_shell.d_res_high 2.02 _refine_ls_shell.d_res_low 2.10 _refine_ls_shell.number_reflns_R_work 2640 _refine_ls_shell.R_factor_R_work 0.2359 _refine_ls_shell.percent_reflns_obs 98.68 _refine_ls_shell.R_factor_R_free 0.2714 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 3.86 _refine_ls_shell.number_reflns_R_free 106 _refine_ls_shell.number_reflns_all 2746 _refine_ls_shell.R_factor_all 0.2373 _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct.entry_id 4Z7B _struct.title 'Structure of the enzyme-product complex resulting from TDG action on a GfC mismatch' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4Z7B _struct_keywords.text 'protein-DNA complex, Hydrolase-DNA complex' _struct_keywords.pdbx_keywords Hydrolase/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 5 ? F N N 5 ? G N N 6 ? H N N 6 ? I N N 6 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 SER A 11 ? LEU A 16 ? SER A 115 LEU A 120 1 ? 6 HELX_P HELX_P2 AA2 GLY A 38 ? GLY A 45 ? GLY A 142 GLY A 149 1 ? 8 HELX_P HELX_P3 AA3 HIS A 54 ? SER A 62 ? HIS A 158 SER A 166 1 ? 9 HELX_P HELX_P4 AA4 ASN A 70 ? HIS A 75 ? ASN A 174 HIS A 179 5 ? 6 HELX_P HELX_P5 AA5 THR A 76 ? GLY A 82 ? THR A 180 GLY A 186 1 ? 7 HELX_P HELX_P6 AA6 GLY A 95 ? LEU A 99 ? GLY A 199 LEU A 203 5 ? 5 HELX_P HELX_P7 AA7 SER A 100 ? GLN A 119 ? SER A 204 GLN A 223 1 ? 20 HELX_P HELX_P8 AA8 GLY A 127 ? GLY A 140 ? GLY A 231 GLY A 244 1 ? 14 HELX_P HELX_P9 AA9 ARG A 177 ? ASP A 180 ? ARG A 281 ASP A 284 5 ? 4 HELX_P HELX_P10 AB1 LYS A 181 ? ILE A 198 ? LYS A 285 ILE A 302 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? C DA 16 "O3'" ? ? ? 1_555 C ORP 17 P ? ? D DA 16 D ORP 17 1_555 ? ? ? ? ? ? ? 1.586 ? ? covale2 covale one ? C ORP 17 O3 ? ? ? 1_555 C DG 18 P ? ? D ORP 17 D DG 18 1_555 ? ? ? ? ? ? ? 1.587 ? ? hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 C DG 28 N1 ? ? C DC 1 D DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 C DG 28 O6 ? ? C DC 1 D DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 C DG 28 N2 ? ? C DC 1 D DG 28 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DA 2 N1 ? ? ? 1_555 C DT 27 N3 ? ? C DA 2 D DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DA 2 N6 ? ? ? 1_555 C DT 27 O4 ? ? C DA 2 D DT 27 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 26 N3 ? ? C DG 3 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 26 O2 ? ? C DG 3 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 26 N4 ? ? C DG 3 D DC 26 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DC 4 N3 ? ? ? 1_555 C DG 25 N1 ? ? C DC 4 D DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DC 4 N4 ? ? ? 1_555 C DG 25 O6 ? ? C DC 4 D DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DC 4 O2 ? ? ? 1_555 C DG 25 N2 ? ? C DC 4 D DG 25 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DT 5 N3 ? ? ? 1_555 C DA 24 N1 ? ? C DT 5 D DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DT 5 O4 ? ? ? 1_555 C DA 24 N6 ? ? C DT 5 D DA 24 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DC 6 N3 ? ? ? 1_555 C DG 23 N1 ? ? C DC 6 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DC 6 N4 ? ? ? 1_555 C DG 23 O6 ? ? C DC 6 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DC 6 O2 ? ? ? 1_555 C DG 23 N2 ? ? C DC 6 D DG 23 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DT 7 N3 ? ? ? 1_555 C DA 22 N1 ? ? C DT 7 D DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DT 7 O4 ? ? ? 1_555 C DA 22 N6 ? ? C DT 7 D DA 22 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 21 N3 ? ? C DG 8 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 21 O2 ? ? C DG 8 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 21 N4 ? ? C DG 8 D DC 21 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DT 9 N3 ? ? ? 1_555 C DA 20 N1 ? ? C DT 9 D DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DT 9 O4 ? ? ? 1_555 C DA 20 N6 ? ? C DT 9 D DA 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DA 10 N1 ? ? ? 1_555 C DT 19 N3 ? ? C DA 10 D DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DA 10 N6 ? ? ? 1_555 C DT 19 O4 ? ? C DA 10 D DT 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DC 11 N3 ? ? ? 1_555 C DG 18 N1 ? ? C DC 11 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DC 11 N4 ? ? ? 1_555 C DG 18 O6 ? ? C DC 11 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DC 11 O2 ? ? ? 1_555 C DG 18 N2 ? ? C DC 11 D DG 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DT 13 N3 ? ? ? 1_555 C DA 16 N1 ? ? C DT 13 D DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DT 13 O4 ? ? ? 1_555 C DA 16 N6 ? ? C DT 13 D DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DG 14 N1 ? ? ? 1_555 C DC 15 N3 ? ? C DG 14 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DG 14 N2 ? ? ? 1_555 C DC 15 O2 ? ? C DG 14 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DG 14 O6 ? ? ? 1_555 C DC 15 N4 ? ? C DG 14 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DA 15 N1 ? ? ? 1_555 C DT 14 N3 ? ? C DA 15 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DA 15 N6 ? ? ? 1_555 C DT 14 O4 ? ? C DA 15 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DG 16 N1 ? ? ? 1_555 C DC 13 N3 ? ? C DG 16 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DG 16 N2 ? ? ? 1_555 C DC 13 O2 ? ? C DG 16 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B DG 16 O6 ? ? ? 1_555 C DC 13 N4 ? ? C DG 16 D DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B DC 17 N3 ? ? ? 1_555 C DG 12 N1 ? ? C DC 17 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B DC 17 N4 ? ? ? 1_555 C DG 12 O6 ? ? C DC 17 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B DC 17 O2 ? ? ? 1_555 C DG 12 N2 ? ? C DC 17 D DG 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B DG 18 N1 ? ? ? 1_555 C DC 11 N3 ? ? C DG 18 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B DG 18 N2 ? ? ? 1_555 C DC 11 O2 ? ? C DG 18 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B DG 18 O6 ? ? ? 1_555 C DC 11 N4 ? ? C DG 18 D DC 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B DA 19 N1 ? ? ? 1_555 C DT 10 N3 ? ? C DA 19 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B DA 19 N6 ? ? ? 1_555 C DT 10 O4 ? ? C DA 19 D DT 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B DT 20 N3 ? ? ? 1_555 C DA 9 N1 ? ? C DT 20 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B DT 20 O4 ? ? ? 1_555 C DA 9 N6 ? ? C DT 20 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog49 hydrog ? ? B DG 21 N1 ? ? ? 1_555 C DC 8 N3 ? ? C DG 21 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog50 hydrog ? ? B DG 21 N2 ? ? ? 1_555 C DC 8 O2 ? ? C DG 21 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog51 hydrog ? ? B DG 21 O6 ? ? ? 1_555 C DC 8 N4 ? ? C DG 21 D DC 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog52 hydrog ? ? B DG 22 N1 ? ? ? 1_555 C DC 7 N3 ? ? C DG 22 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog53 hydrog ? ? B DG 22 N2 ? ? ? 1_555 C DC 7 O2 ? ? C DG 22 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog54 hydrog ? ? B DG 22 O6 ? ? ? 1_555 C DC 7 N4 ? ? C DG 22 D DC 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog55 hydrog ? ? B DA 23 N1 ? ? ? 1_555 C DT 6 N3 ? ? C DA 23 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog56 hydrog ? ? B DA 23 N6 ? ? ? 1_555 C DT 6 O4 ? ? C DA 23 D DT 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog57 hydrog ? ? B DC 24 N3 ? ? ? 1_555 C DG 5 N1 ? ? C DC 24 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog58 hydrog ? ? B DC 24 N4 ? ? ? 1_555 C DG 5 O6 ? ? C DC 24 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog59 hydrog ? ? B DC 24 O2 ? ? ? 1_555 C DG 5 N2 ? ? C DC 24 D DG 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog60 hydrog ? ? B DA 25 N1 ? ? ? 1_555 C DT 4 N3 ? ? C DA 25 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog61 hydrog ? ? B DA 25 N6 ? ? ? 1_555 C DT 4 O4 ? ? C DA 25 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog62 hydrog ? ? B DG 26 N1 ? ? ? 1_555 C DC 3 N3 ? ? C DG 26 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog63 hydrog ? ? B DG 26 N2 ? ? ? 1_555 C DC 3 O2 ? ? C DG 26 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog64 hydrog ? ? B DG 26 O6 ? ? ? 1_555 C DC 3 N4 ? ? C DG 26 D DC 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog65 hydrog ? ? B DC 27 N3 ? ? ? 1_555 C DG 2 N1 ? ? C DC 27 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog66 hydrog ? ? B DC 27 N4 ? ? ? 1_555 C DG 2 O6 ? ? C DC 27 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog67 hydrog ? ? B DC 27 O2 ? ? ? 1_555 C DG 2 N2 ? ? C DC 27 D DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog68 hydrog ? ? B DT 28 N3 ? ? ? 1_555 C DA 1 N1 ? ? C DT 28 D DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog69 hydrog ? ? B DT 28 O4 ? ? ? 1_555 C DA 1 N6 ? ? C DT 28 D DA 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? hydrog ? ? # _struct_sheet.id AA1 _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? parallel AA1 2 3 ? parallel AA1 3 4 ? parallel AA1 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 ILE A 83 ? ASN A 87 ? ILE A 187 ASN A 191 AA1 2 ILE A 30 ? GLY A 34 ? ILE A 134 GLY A 138 AA1 3 ILE A 122 ? ASN A 126 ? ILE A 226 ASN A 230 AA1 4 LEU A 161 ? MET A 165 ? LEU A 265 MET A 269 AA1 5 GLY A 149 ? LEU A 150 ? GLY A 253 LEU A 254 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 O GLY A 84 ? O GLY A 188 N ILE A 32 ? N ILE A 136 AA1 2 3 N VAL A 31 ? N VAL A 135 O VAL A 124 ? O VAL A 228 AA1 3 4 N ALA A 123 ? N ALA A 227 O LEU A 161 ? O LEU A 265 AA1 4 5 O VAL A 164 ? O VAL A 268 N GLY A 149 ? N GLY A 253 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 401 ? 9 'binding site for residue EDO A 401' AC2 Software A ACY 402 ? 8 'binding site for residue ACY A 402' AC3 Software A ACY 403 ? 3 'binding site for residue ACY A 403' AC4 Software D DA 16 ? 26 'binding site for Poly-Saccharide residues DA D 16 through DG D 18' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 9 THR A 86 ? THR A 190 . ? 1_555 ? 2 AC1 9 ASN A 87 ? ASN A 191 . ? 1_555 ? 3 AC1 9 MET A 88 ? MET A 192 . ? 1_555 ? 4 AC1 9 GLU A 90 ? GLU A 194 . ? 1_555 ? 5 AC1 9 GLY A 107 ? GLY A 211 . ? 1_555 ? 6 AC1 9 ILE A 110 ? ILE A 214 . ? 1_555 ? 7 AC1 9 LEU A 111 ? LEU A 215 . ? 1_555 ? 8 AC1 9 LYS A 114 ? LYS A 218 . ? 1_555 ? 9 AC1 9 HOH G . ? HOH A 535 . ? 1_555 ? 10 AC2 8 ILE A 35 ? ILE A 139 . ? 1_555 ? 11 AC2 8 ASN A 36 ? ASN A 140 . ? 1_555 ? 12 AC2 8 TYR A 48 ? TYR A 152 . ? 1_555 ? 13 AC2 8 ASN A 87 ? ASN A 191 . ? 1_555 ? 14 AC2 8 HOH G . ? HOH A 501 . ? 1_555 ? 15 AC2 8 HOH G . ? HOH A 505 . ? 1_555 ? 16 AC2 8 HOH G . ? HOH A 531 . ? 1_555 ? 17 AC2 8 ORP C 17 ? ORP D 17 . ? 1_555 ? 18 AC3 3 GLN A 151 ? GLN A 255 . ? 1_555 ? 19 AC3 3 PRO A 152 ? PRO A 256 . ? 1_555 ? 20 AC3 3 LYS A 154 ? LYS A 258 . ? 1_555 ? 21 AC4 26 ILE A 35 ? ILE A 139 . ? 1_555 ? 22 AC4 26 ASN A 36 ? ASN A 140 . ? 1_555 ? 23 AC4 26 ASN A 53 ? ASN A 157 . ? 1_555 ? 24 AC4 26 GLY A 95 ? GLY A 199 . ? 1_555 ? 25 AC4 26 SER A 96 ? SER A 200 . ? 1_555 ? 26 AC4 26 LYS A 97 ? LYS A 201 . ? 1_555 ? 27 AC4 26 SER A 167 ? SER A 271 . ? 1_555 ? 28 AC4 26 SER A 169 ? SER A 273 . ? 1_555 ? 29 AC4 26 ALA A 170 ? ALA A 274 . ? 1_555 ? 30 AC4 26 ARG A 171 ? ARG A 275 . ? 1_555 ? 31 AC4 26 CYS A 172 ? CYS A 276 . ? 1_555 ? 32 AC4 26 ALA A 173 ? ALA A 277 . ? 1_555 ? 33 AC4 26 GLN A 174 ? GLN A 278 . ? 1_555 ? 34 AC4 26 ACY E . ? ACY A 402 . ? 1_555 ? 35 AC4 26 HOH G . ? HOH A 502 . ? 1_555 ? 36 AC4 26 HOH G . ? HOH A 557 . ? 1_555 ? 37 AC4 26 DA B 10 ? DA C 10 . ? 1_555 ? 38 AC4 26 DC B 11 ? DC C 11 . ? 1_555 ? 39 AC4 26 DG B 12 ? DG C 12 . ? 1_555 ? 40 AC4 26 DT B 13 ? DT C 13 . ? 1_555 ? 41 AC4 26 DG B 14 ? DG C 14 . ? 1_555 ? 42 AC4 26 DC C 15 ? DC D 15 . ? 1_555 ? 43 AC4 26 DT C 19 ? DT D 19 . ? 1_555 ? 44 AC4 26 HOH I . ? HOH D 104 . ? 1_555 ? 45 AC4 26 HOH I . ? HOH D 122 . ? 1_555 ? 46 AC4 26 HOH I . ? HOH D 124 . ? 1_555 ? # _atom_sites.entry_id 4Z7B _atom_sites.fract_transf_matrix[1][1] 0.010400 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.001011 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018580 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012381 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 105 ? ? ? A . n A 1 2 SER 2 106 ? ? ? A . n A 1 3 HIS 3 107 ? ? ? A . n A 1 4 MET 4 108 ? ? ? A . n A 1 5 ALA 5 109 ? ? ? A . n A 1 6 SER 6 110 ? ? ? A . n A 1 7 PHE 7 111 111 PHE PHE A . n A 1 8 ASN 8 112 112 ASN ASN A . n A 1 9 GLY 9 113 113 GLY GLY A . n A 1 10 VAL 10 114 114 VAL VAL A . n A 1 11 SER 11 115 115 SER SER A . n A 1 12 GLU 12 116 116 GLU GLU A . n A 1 13 ALA 13 117 117 ALA ALA A . n A 1 14 GLU 14 118 118 GLU GLU A . n A 1 15 LEU 15 119 119 LEU LEU A . n A 1 16 LEU 16 120 120 LEU LEU A . n A 1 17 THR 17 121 121 THR THR A . n A 1 18 LYS 18 122 122 LYS LYS A . n A 1 19 THR 19 123 123 THR THR A . n A 1 20 LEU 20 124 124 LEU LEU A . n A 1 21 PRO 21 125 125 PRO PRO A . n A 1 22 ASP 22 126 126 ASP ASP A . n A 1 23 ILE 23 127 127 ILE ILE A . n A 1 24 LEU 24 128 128 LEU LEU A . n A 1 25 THR 25 129 129 THR THR A . n A 1 26 PHE 26 130 130 PHE PHE A . n A 1 27 ASN 27 131 131 ASN ASN A . n A 1 28 LEU 28 132 132 LEU LEU A . n A 1 29 ASP 29 133 133 ASP ASP A . n A 1 30 ILE 30 134 134 ILE ILE A . n A 1 31 VAL 31 135 135 VAL VAL A . n A 1 32 ILE 32 136 136 ILE ILE A . n A 1 33 ILE 33 137 137 ILE ILE A . n A 1 34 GLY 34 138 138 GLY GLY A . n A 1 35 ILE 35 139 139 ILE ILE A . n A 1 36 ASN 36 140 140 ASN ASN A . n A 1 37 PRO 37 141 141 PRO PRO A . n A 1 38 GLY 38 142 142 GLY GLY A . n A 1 39 LEU 39 143 143 LEU LEU A . n A 1 40 MET 40 144 144 MET MET A . n A 1 41 ALA 41 145 145 ALA ALA A . n A 1 42 ALA 42 146 146 ALA ALA A . n A 1 43 TYR 43 147 147 TYR TYR A . n A 1 44 LYS 44 148 148 LYS LYS A . n A 1 45 GLY 45 149 149 GLY GLY A . n A 1 46 HIS 46 150 150 HIS HIS A . n A 1 47 HIS 47 151 151 HIS HIS A . n A 1 48 TYR 48 152 152 TYR TYR A . n A 1 49 PRO 49 153 153 PRO PRO A . n A 1 50 GLY 50 154 154 GLY GLY A . n A 1 51 PRO 51 155 155 PRO PRO A . n A 1 52 GLY 52 156 156 GLY GLY A . n A 1 53 ASN 53 157 157 ASN ASN A . n A 1 54 HIS 54 158 158 HIS HIS A . n A 1 55 PHE 55 159 159 PHE PHE A . n A 1 56 TRP 56 160 160 TRP TRP A . n A 1 57 LYS 57 161 161 LYS LYS A . n A 1 58 CYS 58 162 162 CYS CYS A . n A 1 59 LEU 59 163 163 LEU LEU A . n A 1 60 PHE 60 164 164 PHE PHE A . n A 1 61 MET 61 165 165 MET MET A . n A 1 62 SER 62 166 166 SER SER A . n A 1 63 GLY 63 167 167 GLY GLY A . n A 1 64 LEU 64 168 168 LEU LEU A . n A 1 65 SER 65 169 169 SER SER A . n A 1 66 GLU 66 170 170 GLU GLU A . n A 1 67 VAL 67 171 171 VAL VAL A . n A 1 68 GLN 68 172 172 GLN GLN A . n A 1 69 LEU 69 173 173 LEU LEU A . n A 1 70 ASN 70 174 174 ASN ASN A . n A 1 71 HIS 71 175 175 HIS HIS A . n A 1 72 MET 72 176 176 MET MET A . n A 1 73 ASP 73 177 177 ASP ASP A . n A 1 74 ASP 74 178 178 ASP ASP A . n A 1 75 HIS 75 179 179 HIS HIS A . n A 1 76 THR 76 180 180 THR THR A . n A 1 77 LEU 77 181 181 LEU LEU A . n A 1 78 PRO 78 182 182 PRO PRO A . n A 1 79 GLY 79 183 183 GLY GLY A . n A 1 80 LYS 80 184 184 LYS LYS A . n A 1 81 TYR 81 185 185 TYR TYR A . n A 1 82 GLY 82 186 186 GLY GLY A . n A 1 83 ILE 83 187 187 ILE ILE A . n A 1 84 GLY 84 188 188 GLY GLY A . n A 1 85 PHE 85 189 189 PHE PHE A . n A 1 86 THR 86 190 190 THR THR A . n A 1 87 ASN 87 191 191 ASN ASN A . n A 1 88 MET 88 192 192 MET MET A . n A 1 89 VAL 89 193 193 VAL VAL A . n A 1 90 GLU 90 194 194 GLU GLU A . n A 1 91 ARG 91 195 195 ARG ARG A . n A 1 92 THR 92 196 196 THR THR A . n A 1 93 THR 93 197 197 THR THR A . n A 1 94 PRO 94 198 198 PRO PRO A . n A 1 95 GLY 95 199 199 GLY GLY A . n A 1 96 SER 96 200 200 SER SER A . n A 1 97 LYS 97 201 201 LYS LYS A . n A 1 98 ASP 98 202 202 ASP ASP A . n A 1 99 LEU 99 203 203 LEU LEU A . n A 1 100 SER 100 204 204 SER SER A . n A 1 101 SER 101 205 205 SER SER A . n A 1 102 LYS 102 206 206 LYS LYS A . n A 1 103 GLU 103 207 207 GLU GLU A . n A 1 104 PHE 104 208 208 PHE PHE A . n A 1 105 ARG 105 209 209 ARG ARG A . n A 1 106 GLU 106 210 210 GLU GLU A . n A 1 107 GLY 107 211 211 GLY GLY A . n A 1 108 GLY 108 212 212 GLY GLY A . n A 1 109 ARG 109 213 213 ARG ARG A . n A 1 110 ILE 110 214 214 ILE ILE A . n A 1 111 LEU 111 215 215 LEU LEU A . n A 1 112 VAL 112 216 216 VAL VAL A . n A 1 113 GLN 113 217 217 GLN GLN A . n A 1 114 LYS 114 218 218 LYS LYS A . n A 1 115 LEU 115 219 219 LEU LEU A . n A 1 116 GLN 116 220 220 GLN GLN A . n A 1 117 LYS 117 221 221 LYS LYS A . n A 1 118 TYR 118 222 222 TYR TYR A . n A 1 119 GLN 119 223 223 GLN GLN A . n A 1 120 PRO 120 224 224 PRO PRO A . n A 1 121 ARG 121 225 225 ARG ARG A . n A 1 122 ILE 122 226 226 ILE ILE A . n A 1 123 ALA 123 227 227 ALA ALA A . n A 1 124 VAL 124 228 228 VAL VAL A . n A 1 125 PHE 125 229 229 PHE PHE A . n A 1 126 ASN 126 230 230 ASN ASN A . n A 1 127 GLY 127 231 231 GLY GLY A . n A 1 128 LYS 128 232 232 LYS LYS A . n A 1 129 CYS 129 233 233 CYS CYS A . n A 1 130 ILE 130 234 234 ILE ILE A . n A 1 131 TYR 131 235 235 TYR TYR A . n A 1 132 GLU 132 236 236 GLU GLU A . n A 1 133 ILE 133 237 237 ILE ILE A . n A 1 134 PHE 134 238 238 PHE PHE A . n A 1 135 SER 135 239 239 SER SER A . n A 1 136 LYS 136 240 240 LYS LYS A . n A 1 137 GLU 137 241 241 GLU GLU A . n A 1 138 VAL 138 242 242 VAL VAL A . n A 1 139 PHE 139 243 243 PHE PHE A . n A 1 140 GLY 140 244 244 GLY GLY A . n A 1 141 VAL 141 245 245 VAL VAL A . n A 1 142 LYS 142 246 246 LYS LYS A . n A 1 143 VAL 143 247 247 VAL VAL A . n A 1 144 LYS 144 248 248 LYS LYS A . n A 1 145 ASN 145 249 249 ASN ASN A . n A 1 146 LEU 146 250 250 LEU LEU A . n A 1 147 GLU 147 251 251 GLU GLU A . n A 1 148 PHE 148 252 252 PHE PHE A . n A 1 149 GLY 149 253 253 GLY GLY A . n A 1 150 LEU 150 254 254 LEU LEU A . n A 1 151 GLN 151 255 255 GLN GLN A . n A 1 152 PRO 152 256 256 PRO PRO A . n A 1 153 HIS 153 257 257 HIS HIS A . n A 1 154 LYS 154 258 258 LYS LYS A . n A 1 155 ILE 155 259 259 ILE ILE A . n A 1 156 PRO 156 260 260 PRO PRO A . n A 1 157 ASP 157 261 261 ASP ASP A . n A 1 158 THR 158 262 262 THR THR A . n A 1 159 GLU 159 263 263 GLU GLU A . n A 1 160 THR 160 264 264 THR THR A . n A 1 161 LEU 161 265 265 LEU LEU A . n A 1 162 CYS 162 266 266 CYS CYS A . n A 1 163 TYR 163 267 267 TYR TYR A . n A 1 164 VAL 164 268 268 VAL VAL A . n A 1 165 MET 165 269 269 MET MET A . n A 1 166 PRO 166 270 270 PRO PRO A . n A 1 167 SER 167 271 271 SER SER A . n A 1 168 SER 168 272 272 SER SER A . n A 1 169 SER 169 273 273 SER SER A . n A 1 170 ALA 170 274 274 ALA ALA A . n A 1 171 ARG 171 275 275 ARG ARG A . n A 1 172 CYS 172 276 276 CYS CYS A . n A 1 173 ALA 173 277 277 ALA ALA A . n A 1 174 GLN 174 278 278 GLN GLN A . n A 1 175 PHE 175 279 279 PHE PHE A . n A 1 176 PRO 176 280 280 PRO PRO A . n A 1 177 ARG 177 281 281 ARG ARG A . n A 1 178 ALA 178 282 282 ALA ALA A . n A 1 179 GLN 179 283 283 GLN GLN A . n A 1 180 ASP 180 284 284 ASP ASP A . n A 1 181 LYS 181 285 285 LYS LYS A . n A 1 182 VAL 182 286 286 VAL VAL A . n A 1 183 HIS 183 287 287 HIS HIS A . n A 1 184 TYR 184 288 288 TYR TYR A . n A 1 185 TYR 185 289 289 TYR TYR A . n A 1 186 ILE 186 290 290 ILE ILE A . n A 1 187 LYS 187 291 291 LYS LYS A . n A 1 188 LEU 188 292 292 LEU LEU A . n A 1 189 LYS 189 293 293 LYS LYS A . n A 1 190 ASP 190 294 294 ASP ASP A . n A 1 191 LEU 191 295 295 LEU LEU A . n A 1 192 ARG 192 296 296 ARG ARG A . n A 1 193 ASP 193 297 297 ASP ASP A . n A 1 194 GLN 194 298 298 GLN GLN A . n A 1 195 LEU 195 299 299 LEU LEU A . n A 1 196 LYS 196 300 300 LYS LYS A . n A 1 197 GLY 197 301 301 GLY GLY A . n A 1 198 ILE 198 302 302 ILE ILE A . n A 1 199 GLU 199 303 303 GLU GLU A . n A 1 200 ARG 200 304 ? ? ? A . n A 1 201 ASN 201 305 ? ? ? A . n A 1 202 MET 202 306 ? ? ? A . n A 1 203 ASP 203 307 ? ? ? A . n A 1 204 VAL 204 308 ? ? ? A . n B 2 1 DC 1 1 1 DC DC C . n B 2 2 DA 2 2 2 DA DA C . n B 2 3 DG 3 3 3 DG DG C . n B 2 4 DC 4 4 4 DC DC C . n B 2 5 DT 5 5 5 DT DT C . n B 2 6 DC 6 6 6 DC DC C . n B 2 7 DT 7 7 7 DT DT C . n B 2 8 DG 8 8 8 DG DG C . n B 2 9 DT 9 9 9 DT DT C . n B 2 10 DA 10 10 10 DA DA C . n B 2 11 DC 11 11 11 DC DC C . n B 2 12 DG 12 12 12 DG DG C . n B 2 13 DT 13 13 13 DT DT C . n B 2 14 DG 14 14 14 DG DG C . n B 2 15 DA 15 15 15 DA DA C . n B 2 16 DG 16 16 16 DG DG C . n B 2 17 DC 17 17 17 DC DC C . n B 2 18 DG 18 18 18 DG DG C . n B 2 19 DA 19 19 19 DA DA C . n B 2 20 DT 20 20 20 DT DT C . n B 2 21 DG 21 21 21 DG DG C . n B 2 22 DG 22 22 22 DG DG C . n B 2 23 DA 23 23 23 DA DA C . n B 2 24 DC 24 24 24 DC DC C . n B 2 25 DA 25 25 25 DA DA C . n B 2 26 DG 26 26 26 DG DG C . n B 2 27 DC 27 27 27 DC DC C . n B 2 28 DT 28 28 28 DT DT C . n C 3 1 DA 1 1 1 DA DA D . n C 3 2 DG 2 2 2 DG DG D . n C 3 3 DC 3 3 3 DC DC D . n C 3 4 DT 4 4 4 DT DT D . n C 3 5 DG 5 5 5 DG DG D . n C 3 6 DT 6 6 6 DT DT D . n C 3 7 DC 7 7 7 DC DC D . n C 3 8 DC 8 8 8 DC DC D . n C 3 9 DA 9 9 9 DA DA D . n C 3 10 DT 10 10 10 DT DT D . n C 3 11 DC 11 11 11 DC DC D . n C 3 12 DG 12 12 12 DG DG D . n C 3 13 DC 13 13 13 DC DC D . n C 3 14 DT 14 14 14 DT DT D . n C 3 15 DC 15 15 15 DC DC D . n C 3 16 DA 16 16 16 DA DA D . n C 3 17 ORP 17 17 17 ORP ORF D . n C 3 18 DG 18 18 18 DG DG D . n C 3 19 DT 19 19 19 DT DT D . n C 3 20 DA 20 20 20 DA DA D . n C 3 21 DC 21 21 21 DC DC D . n C 3 22 DA 22 22 22 DA DA D . n C 3 23 DG 23 23 23 DG DG D . n C 3 24 DA 24 24 24 DA DA D . n C 3 25 DG 25 25 25 DG DG D . n C 3 26 DC 26 26 26 DC DC D . n C 3 27 DT 27 27 27 DT DT D . n C 3 28 DG 28 28 28 DG DG D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 EDO 1 401 1 EDO EDO A . E 5 ACY 1 402 1 ACY ACY A . F 5 ACY 1 403 2 ACY ACY A . G 6 HOH 1 501 17 HOH HOH A . G 6 HOH 2 502 136 HOH HOH A . G 6 HOH 3 503 44 HOH HOH A . G 6 HOH 4 504 12 HOH HOH A . G 6 HOH 5 505 22 HOH HOH A . G 6 HOH 6 506 21 HOH HOH A . G 6 HOH 7 507 10 HOH HOH A . G 6 HOH 8 508 14 HOH HOH A . G 6 HOH 9 509 27 HOH HOH A . G 6 HOH 10 510 36 HOH HOH A . G 6 HOH 11 511 116 HOH HOH A . G 6 HOH 12 512 40 HOH HOH A . G 6 HOH 13 513 20 HOH HOH A . G 6 HOH 14 514 172 HOH HOH A . G 6 HOH 15 515 151 HOH HOH A . G 6 HOH 16 516 144 HOH HOH A . G 6 HOH 17 517 163 HOH HOH A . G 6 HOH 18 518 52 HOH HOH A . G 6 HOH 19 519 171 HOH HOH A . G 6 HOH 20 520 160 HOH HOH A . G 6 HOH 21 521 9 HOH HOH A . G 6 HOH 22 522 159 HOH HOH A . G 6 HOH 23 523 155 HOH HOH A . G 6 HOH 24 524 166 HOH HOH A . G 6 HOH 25 525 158 HOH HOH A . G 6 HOH 26 526 49 HOH HOH A . G 6 HOH 27 527 8 HOH HOH A . G 6 HOH 28 528 183 HOH HOH A . G 6 HOH 29 529 178 HOH HOH A . G 6 HOH 30 530 3 HOH HOH A . G 6 HOH 31 531 19 HOH HOH A . G 6 HOH 32 532 5 HOH HOH A . G 6 HOH 33 533 148 HOH HOH A . G 6 HOH 34 534 51 HOH HOH A . G 6 HOH 35 535 57 HOH HOH A . G 6 HOH 36 536 73 HOH HOH A . G 6 HOH 37 537 111 HOH HOH A . G 6 HOH 38 538 62 HOH HOH A . G 6 HOH 39 539 2 HOH HOH A . G 6 HOH 40 540 161 HOH HOH A . G 6 HOH 41 541 162 HOH HOH A . G 6 HOH 42 542 15 HOH HOH A . G 6 HOH 43 543 112 HOH HOH A . G 6 HOH 44 544 176 HOH HOH A . G 6 HOH 45 545 33 HOH HOH A . G 6 HOH 46 546 131 HOH HOH A . G 6 HOH 47 547 54 HOH HOH A . G 6 HOH 48 548 42 HOH HOH A . G 6 HOH 49 549 43 HOH HOH A . G 6 HOH 50 550 28 HOH HOH A . G 6 HOH 51 551 78 HOH HOH A . G 6 HOH 52 552 26 HOH HOH A . G 6 HOH 53 553 30 HOH HOH A . G 6 HOH 54 554 152 HOH HOH A . G 6 HOH 55 555 77 HOH HOH A . G 6 HOH 56 556 50 HOH HOH A . G 6 HOH 57 557 157 HOH HOH A . G 6 HOH 58 558 55 HOH HOH A . G 6 HOH 59 559 179 HOH HOH A . G 6 HOH 60 560 150 HOH HOH A . G 6 HOH 61 561 64 HOH HOH A . G 6 HOH 62 562 196 HOH HOH A . G 6 HOH 63 563 122 HOH HOH A . G 6 HOH 64 564 145 HOH HOH A . G 6 HOH 65 565 165 HOH HOH A . G 6 HOH 66 566 147 HOH HOH A . G 6 HOH 67 567 72 HOH HOH A . G 6 HOH 68 568 37 HOH HOH A . G 6 HOH 69 569 61 HOH HOH A . G 6 HOH 70 570 108 HOH HOH A . G 6 HOH 71 571 169 HOH HOH A . G 6 HOH 72 572 132 HOH HOH A . G 6 HOH 73 573 128 HOH HOH A . G 6 HOH 74 574 170 HOH HOH A . G 6 HOH 75 575 195 HOH HOH A . G 6 HOH 76 576 89 HOH HOH A . G 6 HOH 77 577 174 HOH HOH A . G 6 HOH 78 578 133 HOH HOH A . G 6 HOH 79 579 81 HOH HOH A . G 6 HOH 80 580 175 HOH HOH A . G 6 HOH 81 581 67 HOH HOH A . G 6 HOH 82 582 59 HOH HOH A . G 6 HOH 83 583 167 HOH HOH A . G 6 HOH 84 584 60 HOH HOH A . G 6 HOH 85 585 135 HOH HOH A . G 6 HOH 86 586 13 HOH HOH A . G 6 HOH 87 587 168 HOH HOH A . G 6 HOH 88 588 173 HOH HOH A . G 6 HOH 89 589 188 HOH HOH A . G 6 HOH 90 590 118 HOH HOH A . G 6 HOH 91 591 127 HOH HOH A . H 6 HOH 1 101 83 HOH HOH C . H 6 HOH 2 102 189 HOH HOH C . H 6 HOH 3 103 185 HOH HOH C . H 6 HOH 4 104 105 HOH HOH C . H 6 HOH 5 105 95 HOH HOH C . H 6 HOH 6 106 184 HOH HOH C . H 6 HOH 7 107 100 HOH HOH C . H 6 HOH 8 108 102 HOH HOH C . H 6 HOH 9 109 104 HOH HOH C . H 6 HOH 10 110 192 HOH HOH C . H 6 HOH 11 111 91 HOH HOH C . H 6 HOH 12 112 84 HOH HOH C . H 6 HOH 13 113 107 HOH HOH C . H 6 HOH 14 114 48 HOH HOH C . H 6 HOH 15 115 182 HOH HOH C . H 6 HOH 16 116 88 HOH HOH C . H 6 HOH 17 117 58 HOH HOH C . H 6 HOH 18 118 106 HOH HOH C . H 6 HOH 19 119 82 HOH HOH C . H 6 HOH 20 120 194 HOH HOH C . H 6 HOH 21 121 156 HOH HOH C . I 6 HOH 1 101 25 HOH HOH D . I 6 HOH 2 102 103 HOH HOH D . I 6 HOH 3 103 187 HOH HOH D . I 6 HOH 4 104 18 HOH HOH D . I 6 HOH 5 105 66 HOH HOH D . I 6 HOH 6 106 164 HOH HOH D . I 6 HOH 7 107 32 HOH HOH D . I 6 HOH 8 108 154 HOH HOH D . I 6 HOH 9 109 93 HOH HOH D . I 6 HOH 10 110 96 HOH HOH D . I 6 HOH 11 111 190 HOH HOH D . I 6 HOH 12 112 69 HOH HOH D . I 6 HOH 13 113 11 HOH HOH D . I 6 HOH 14 114 114 HOH HOH D . I 6 HOH 15 115 23 HOH HOH D . I 6 HOH 16 116 126 HOH HOH D . I 6 HOH 17 117 80 HOH HOH D . I 6 HOH 18 118 180 HOH HOH D . I 6 HOH 19 119 181 HOH HOH D . I 6 HOH 20 120 86 HOH HOH D . I 6 HOH 21 121 191 HOH HOH D . I 6 HOH 22 122 125 HOH HOH D . I 6 HOH 23 123 7 HOH HOH D . I 6 HOH 24 124 115 HOH HOH D . I 6 HOH 25 125 186 HOH HOH D . I 6 HOH 26 126 97 HOH HOH D . I 6 HOH 27 127 70 HOH HOH D . I 6 HOH 28 128 123 HOH HOH D . I 6 HOH 29 129 193 HOH HOH D . I 6 HOH 30 130 56 HOH HOH D . I 6 HOH 31 131 120 HOH HOH D . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 5210 ? 1 MORE -20 ? 1 'SSA (A^2)' 17670 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-09-16 2 'Structure model' 1 1 2015-09-30 3 'Structure model' 1 2 2015-11-11 4 'Structure model' 1 3 2017-09-13 5 'Structure model' 1 4 2019-12-25 6 'Structure model' 1 5 2023-09-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Author supporting evidence' 7 6 'Structure model' 'Data collection' 8 6 'Structure model' 'Database references' 9 6 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' pdbx_audit_support 3 4 'Structure model' pdbx_struct_oper_list 4 5 'Structure model' pdbx_audit_support 5 6 'Structure model' chem_comp_atom 6 6 'Structure model' chem_comp_bond 7 6 'Structure model' database_2 8 6 'Structure model' diffrn_radiation_wavelength 9 6 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_id_CSD' 2 4 'Structure model' '_pdbx_audit_support.funding_organization' 3 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 4 5 'Structure model' '_pdbx_audit_support.funding_organization' 5 6 'Structure model' '_database_2.pdbx_DOI' 6 6 'Structure model' '_database_2.pdbx_database_accession' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 22.5642 -17.1508 30.5768 0.2920 0.1652 0.0074 0.1430 -0.0049 0.0332 6.0448 5.9261 13.4762 -4.1653 6.2920 -8.4490 0.5764 0.4550 -0.4762 -0.4217 -0.8868 -0.3211 0.8015 1.6913 0.3104 'X-RAY DIFFRACTION' 2 ? refined 8.3781 -6.8397 29.8784 0.0438 -0.0647 -0.0820 -0.0277 0.0026 -0.0161 1.8305 3.7101 3.9004 -0.8372 0.1189 -0.6038 -0.0789 -0.1606 -0.0603 0.2149 -0.0437 0.3438 0.1470 -0.2143 0.1226 'X-RAY DIFFRACTION' 3 ? refined 23.8169 -6.4120 17.6055 0.1424 0.2881 -0.0409 -0.0124 0.0422 0.1120 16.1102 8.0986 0.9476 8.4412 5.6588 3.6903 0.2018 -0.2039 -0.1301 -0.2122 -0.5519 -0.6304 0.1928 0.6333 0.3501 'X-RAY DIFFRACTION' 4 ? refined 6.4087 1.8788 18.4809 0.1972 0.0169 0.0373 0.0125 -0.0905 -0.0251 1.5606 3.9861 3.4064 -0.0369 0.5441 0.2460 -0.1936 0.1019 0.1112 -0.4779 -0.0044 0.5945 -0.1886 -0.2756 0.1981 'X-RAY DIFFRACTION' 5 ? refined 26.2393 8.5617 20.8644 0.2481 0.1883 -0.0854 -0.1503 -0.0558 0.0827 3.3511 4.3084 14.8260 0.4004 -3.3598 -3.8198 -0.0168 0.6300 0.2218 -0.9536 0.1244 -0.3268 0.3715 -0.0075 -0.1076 'X-RAY DIFFRACTION' 6 ? refined 32.8822 -5.6546 64.2107 0.6583 0.0583 0.1009 0.0152 -0.1448 0.0152 2.2953 6.1874 22.9387 0.3802 0.4875 -6.1021 0.5371 -0.3181 -0.1729 1.2129 0.0358 0.0485 -0.9843 -0.1992 -0.5729 'X-RAY DIFFRACTION' 7 ? refined 32.2794 -3.1990 56.4884 0.2785 -0.1917 -0.1325 0.0132 -0.1052 0.0127 2.3716 2.3475 7.9274 -0.0128 1.0176 -2.7645 0.3632 0.0133 -0.0486 0.9460 0.0727 -0.0977 -0.6969 0.2353 -0.4359 'X-RAY DIFFRACTION' 8 ? refined 27.3670 10.9622 9.6644 0.8599 0.4405 -0.0328 -0.1654 0.0471 0.2139 1.9874 3.4584 20.0085 2.8034 -7.1643 -5.7696 0.4428 0.4544 0.2995 -1.1885 -0.1212 0.1198 -1.0481 1.2270 -0.3216 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? '{ A|111 - A|125 }' 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? '{ A|126 - A|197 }' 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? '{ A|198 - A|208 }' 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? '{ A|209 - A|303 }' 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? '{ C|1 - C|17 }' 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? '{ C|18 - C|28 }' 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? '{ D|1 - D|16 }' 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? '{ D|18 - D|28 }' # _phasing.method MR # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? BUSTER ? ? ? 2.10.2 1 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? Aimless ? ? ? 0.5.4 2 ? phasing ? ? ? ? ? ? ? ? ? ? ? PHASER ? ? ? . 3 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.15 4 ? 'data collection' ? ? ? ? ? ? ? ? ? ? ? Blu-Ice ? ? ? . 5 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 6 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 "O3'" _pdbx_validate_rmsd_bond.auth_asym_id_1 D _pdbx_validate_rmsd_bond.auth_comp_id_1 DC _pdbx_validate_rmsd_bond.auth_seq_id_1 8 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 "C3'" _pdbx_validate_rmsd_bond.auth_asym_id_2 D _pdbx_validate_rmsd_bond.auth_comp_id_2 DC _pdbx_validate_rmsd_bond.auth_seq_id_2 8 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.377 _pdbx_validate_rmsd_bond.bond_target_value 1.419 _pdbx_validate_rmsd_bond.bond_deviation -0.042 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.006 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DC 4 ? ? "C1'" C DC 4 ? ? N1 C DC 4 ? ? 110.36 108.30 2.06 0.30 N 2 1 "O4'" C DC 17 ? ? "C1'" C DC 17 ? ? N1 C DC 17 ? ? 110.19 108.30 1.89 0.30 N 3 1 "O4'" C DC 27 ? ? "C1'" C DC 27 ? ? N1 C DC 27 ? ? 110.58 108.30 2.28 0.30 N 4 1 "O4'" C DT 28 ? ? "C1'" C DT 28 ? ? N1 C DT 28 ? ? 110.24 108.30 1.94 0.30 N 5 1 "O4'" D DG 23 ? ? "C1'" D DG 23 ? ? N9 D DG 23 ? ? 110.11 108.30 1.81 0.30 N 6 1 "O4'" D DC 26 ? ? "C1'" D DC 26 ? ? N1 D DC 26 ? ? 110.55 108.30 2.25 0.30 N # _pdbx_validate_planes.id 1 _pdbx_validate_planes.PDB_model_num 1 _pdbx_validate_planes.auth_comp_id DC _pdbx_validate_planes.auth_asym_id C _pdbx_validate_planes.auth_seq_id 17 _pdbx_validate_planes.PDB_ins_code ? _pdbx_validate_planes.label_alt_id ? _pdbx_validate_planes.rmsd 0.059 _pdbx_validate_planes.type 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 184 ? CG ? A LYS 80 CG 2 1 Y 1 A LYS 184 ? CD ? A LYS 80 CD 3 1 Y 1 A LYS 184 ? CE ? A LYS 80 CE 4 1 Y 1 A LYS 184 ? NZ ? A LYS 80 NZ 5 1 Y 1 A LYS 206 ? CG ? A LYS 102 CG 6 1 Y 1 A LYS 206 ? CD ? A LYS 102 CD 7 1 Y 1 A LYS 206 ? CE ? A LYS 102 CE 8 1 Y 1 A LYS 206 ? NZ ? A LYS 102 NZ 9 1 Y 1 A LYS 246 ? CG ? A LYS 142 CG 10 1 Y 1 A LYS 246 ? CD ? A LYS 142 CD 11 1 Y 1 A LYS 246 ? CE ? A LYS 142 CE 12 1 Y 1 A LYS 246 ? NZ ? A LYS 142 NZ 13 1 Y 1 A LYS 248 ? CG ? A LYS 144 CG 14 1 Y 1 A LYS 248 ? CD ? A LYS 144 CD 15 1 Y 1 A LYS 248 ? CE ? A LYS 144 CE 16 1 Y 1 A LYS 248 ? NZ ? A LYS 144 NZ 17 1 Y 1 A ASN 249 ? CG ? A ASN 145 CG 18 1 Y 1 A ASN 249 ? OD1 ? A ASN 145 OD1 19 1 Y 1 A ASN 249 ? ND2 ? A ASN 145 ND2 20 1 Y 1 A ILE 302 ? CG1 ? A ILE 198 CG1 21 1 Y 1 A ILE 302 ? CG2 ? A ILE 198 CG2 22 1 Y 1 A ILE 302 ? CD1 ? A ILE 198 CD1 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 105 ? A GLY 1 2 1 Y 1 A SER 106 ? A SER 2 3 1 Y 1 A HIS 107 ? A HIS 3 4 1 Y 1 A MET 108 ? A MET 4 5 1 Y 1 A ALA 109 ? A ALA 5 6 1 Y 1 A SER 110 ? A SER 6 7 1 Y 1 A ARG 304 ? A ARG 200 8 1 Y 1 A ASN 305 ? A ASN 201 9 1 Y 1 A MET 306 ? A MET 202 10 1 Y 1 A ASP 307 ? A ASP 203 11 1 Y 1 A VAL 308 ? A VAL 204 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ACY C C N N 1 ACY O O N N 2 ACY OXT O N N 3 ACY CH3 C N N 4 ACY HXT H N N 5 ACY H1 H N N 6 ACY H2 H N N 7 ACY H3 H N N 8 ALA N N N N 9 ALA CA C N S 10 ALA C C N N 11 ALA O O N N 12 ALA CB C N N 13 ALA OXT O N N 14 ALA H H N N 15 ALA H2 H N N 16 ALA HA H N N 17 ALA HB1 H N N 18 ALA HB2 H N N 19 ALA HB3 H N N 20 ALA HXT H N N 21 ARG N N N N 22 ARG CA C N S 23 ARG C C N N 24 ARG O O N N 25 ARG CB C N N 26 ARG CG C N N 27 ARG CD C N N 28 ARG NE N N N 29 ARG CZ C N N 30 ARG NH1 N N N 31 ARG NH2 N N N 32 ARG OXT O N N 33 ARG H H N N 34 ARG H2 H N N 35 ARG HA H N N 36 ARG HB2 H N N 37 ARG HB3 H N N 38 ARG HG2 H N N 39 ARG HG3 H N N 40 ARG HD2 H N N 41 ARG HD3 H N N 42 ARG HE H N N 43 ARG HH11 H N N 44 ARG HH12 H N N 45 ARG HH21 H N N 46 ARG HH22 H N N 47 ARG HXT H N N 48 ASN N N N N 49 ASN CA C N S 50 ASN C C N N 51 ASN O O N N 52 ASN CB C N N 53 ASN CG C N N 54 ASN OD1 O N N 55 ASN ND2 N N N 56 ASN OXT O N N 57 ASN H H N N 58 ASN H2 H N N 59 ASN HA H N N 60 ASN HB2 H N N 61 ASN HB3 H N N 62 ASN HD21 H N N 63 ASN HD22 H N N 64 ASN HXT H N N 65 ASP N N N N 66 ASP CA C N S 67 ASP C C N N 68 ASP O O N N 69 ASP CB C N N 70 ASP CG C N N 71 ASP OD1 O N N 72 ASP OD2 O N N 73 ASP OXT O N N 74 ASP H H N N 75 ASP H2 H N N 76 ASP HA H N N 77 ASP HB2 H N N 78 ASP HB3 H N N 79 ASP HD2 H N N 80 ASP HXT H N N 81 CYS N N N N 82 CYS CA C N R 83 CYS C C N N 84 CYS O O N N 85 CYS CB C N N 86 CYS SG S N N 87 CYS OXT O N N 88 CYS H H N N 89 CYS H2 H N N 90 CYS HA H N N 91 CYS HB2 H N N 92 CYS HB3 H N N 93 CYS HG H N N 94 CYS HXT H N N 95 DA OP3 O N N 96 DA P P N N 97 DA OP1 O N N 98 DA OP2 O N N 99 DA "O5'" O N N 100 DA "C5'" C N N 101 DA "C4'" C N R 102 DA "O4'" O N N 103 DA "C3'" C N S 104 DA "O3'" O N N 105 DA "C2'" C N N 106 DA "C1'" C N R 107 DA N9 N Y N 108 DA C8 C Y N 109 DA N7 N Y N 110 DA C5 C Y N 111 DA C6 C Y N 112 DA N6 N N N 113 DA N1 N Y N 114 DA C2 C Y N 115 DA N3 N Y N 116 DA C4 C Y N 117 DA HOP3 H N N 118 DA HOP2 H N N 119 DA "H5'" H N N 120 DA "H5''" H N N 121 DA "H4'" H N N 122 DA "H3'" H N N 123 DA "HO3'" H N N 124 DA "H2'" H N N 125 DA "H2''" H N N 126 DA "H1'" H N N 127 DA H8 H N N 128 DA H61 H N N 129 DA H62 H N N 130 DA H2 H N N 131 DC OP3 O N N 132 DC P P N N 133 DC OP1 O N N 134 DC OP2 O N N 135 DC "O5'" O N N 136 DC "C5'" C N N 137 DC "C4'" C N R 138 DC "O4'" O N N 139 DC "C3'" C N S 140 DC "O3'" O N N 141 DC "C2'" C N N 142 DC "C1'" C N R 143 DC N1 N N N 144 DC C2 C N N 145 DC O2 O N N 146 DC N3 N N N 147 DC C4 C N N 148 DC N4 N N N 149 DC C5 C N N 150 DC C6 C N N 151 DC HOP3 H N N 152 DC HOP2 H N N 153 DC "H5'" H N N 154 DC "H5''" H N N 155 DC "H4'" H N N 156 DC "H3'" H N N 157 DC "HO3'" H N N 158 DC "H2'" H N N 159 DC "H2''" H N N 160 DC "H1'" H N N 161 DC H41 H N N 162 DC H42 H N N 163 DC H5 H N N 164 DC H6 H N N 165 DG OP3 O N N 166 DG P P N N 167 DG OP1 O N N 168 DG OP2 O N N 169 DG "O5'" O N N 170 DG "C5'" C N N 171 DG "C4'" C N R 172 DG "O4'" O N N 173 DG "C3'" C N S 174 DG "O3'" O N N 175 DG "C2'" C N N 176 DG "C1'" C N R 177 DG N9 N Y N 178 DG C8 C Y N 179 DG N7 N Y N 180 DG C5 C Y N 181 DG C6 C N N 182 DG O6 O N N 183 DG N1 N N N 184 DG C2 C N N 185 DG N2 N N N 186 DG N3 N N N 187 DG C4 C Y N 188 DG HOP3 H N N 189 DG HOP2 H N N 190 DG "H5'" H N N 191 DG "H5''" H N N 192 DG "H4'" H N N 193 DG "H3'" H N N 194 DG "HO3'" H N N 195 DG "H2'" H N N 196 DG "H2''" H N N 197 DG "H1'" H N N 198 DG H8 H N N 199 DG H1 H N N 200 DG H21 H N N 201 DG H22 H N N 202 DT OP3 O N N 203 DT P P N N 204 DT OP1 O N N 205 DT OP2 O N N 206 DT "O5'" O N N 207 DT "C5'" C N N 208 DT "C4'" C N R 209 DT "O4'" O N N 210 DT "C3'" C N S 211 DT "O3'" O N N 212 DT "C2'" C N N 213 DT "C1'" C N R 214 DT N1 N N N 215 DT C2 C N N 216 DT O2 O N N 217 DT N3 N N N 218 DT C4 C N N 219 DT O4 O N N 220 DT C5 C N N 221 DT C7 C N N 222 DT C6 C N N 223 DT HOP3 H N N 224 DT HOP2 H N N 225 DT "H5'" H N N 226 DT "H5''" H N N 227 DT "H4'" H N N 228 DT "H3'" H N N 229 DT "HO3'" H N N 230 DT "H2'" H N N 231 DT "H2''" H N N 232 DT "H1'" H N N 233 DT H3 H N N 234 DT H71 H N N 235 DT H72 H N N 236 DT H73 H N N 237 DT H6 H N N 238 EDO C1 C N N 239 EDO O1 O N N 240 EDO C2 C N N 241 EDO O2 O N N 242 EDO H11 H N N 243 EDO H12 H N N 244 EDO HO1 H N N 245 EDO H21 H N N 246 EDO H22 H N N 247 EDO HO2 H N N 248 GLN N N N N 249 GLN CA C N S 250 GLN C C N N 251 GLN O O N N 252 GLN CB C N N 253 GLN CG C N N 254 GLN CD C N N 255 GLN OE1 O N N 256 GLN NE2 N N N 257 GLN OXT O N N 258 GLN H H N N 259 GLN H2 H N N 260 GLN HA H N N 261 GLN HB2 H N N 262 GLN HB3 H N N 263 GLN HG2 H N N 264 GLN HG3 H N N 265 GLN HE21 H N N 266 GLN HE22 H N N 267 GLN HXT H N N 268 GLU N N N N 269 GLU CA C N S 270 GLU C C N N 271 GLU O O N N 272 GLU CB C N N 273 GLU CG C N N 274 GLU CD C N N 275 GLU OE1 O N N 276 GLU OE2 O N N 277 GLU OXT O N N 278 GLU H H N N 279 GLU H2 H N N 280 GLU HA H N N 281 GLU HB2 H N N 282 GLU HB3 H N N 283 GLU HG2 H N N 284 GLU HG3 H N N 285 GLU HE2 H N N 286 GLU HXT H N N 287 GLY N N N N 288 GLY CA C N N 289 GLY C C N N 290 GLY O O N N 291 GLY OXT O N N 292 GLY H H N N 293 GLY H2 H N N 294 GLY HA2 H N N 295 GLY HA3 H N N 296 GLY HXT H N N 297 HIS N N N N 298 HIS CA C N S 299 HIS C C N N 300 HIS O O N N 301 HIS CB C N N 302 HIS CG C Y N 303 HIS ND1 N Y N 304 HIS CD2 C Y N 305 HIS CE1 C Y N 306 HIS NE2 N Y N 307 HIS OXT O N N 308 HIS H H N N 309 HIS H2 H N N 310 HIS HA H N N 311 HIS HB2 H N N 312 HIS HB3 H N N 313 HIS HD1 H N N 314 HIS HD2 H N N 315 HIS HE1 H N N 316 HIS HE2 H N N 317 HIS HXT H N N 318 HOH O O N N 319 HOH H1 H N N 320 HOH H2 H N N 321 ILE N N N N 322 ILE CA C N S 323 ILE C C N N 324 ILE O O N N 325 ILE CB C N S 326 ILE CG1 C N N 327 ILE CG2 C N N 328 ILE CD1 C N N 329 ILE OXT O N N 330 ILE H H N N 331 ILE H2 H N N 332 ILE HA H N N 333 ILE HB H N N 334 ILE HG12 H N N 335 ILE HG13 H N N 336 ILE HG21 H N N 337 ILE HG22 H N N 338 ILE HG23 H N N 339 ILE HD11 H N N 340 ILE HD12 H N N 341 ILE HD13 H N N 342 ILE HXT H N N 343 LEU N N N N 344 LEU CA C N S 345 LEU C C N N 346 LEU O O N N 347 LEU CB C N N 348 LEU CG C N N 349 LEU CD1 C N N 350 LEU CD2 C N N 351 LEU OXT O N N 352 LEU H H N N 353 LEU H2 H N N 354 LEU HA H N N 355 LEU HB2 H N N 356 LEU HB3 H N N 357 LEU HG H N N 358 LEU HD11 H N N 359 LEU HD12 H N N 360 LEU HD13 H N N 361 LEU HD21 H N N 362 LEU HD22 H N N 363 LEU HD23 H N N 364 LEU HXT H N N 365 LYS N N N N 366 LYS CA C N S 367 LYS C C N N 368 LYS O O N N 369 LYS CB C N N 370 LYS CG C N N 371 LYS CD C N N 372 LYS CE C N N 373 LYS NZ N N N 374 LYS OXT O N N 375 LYS H H N N 376 LYS H2 H N N 377 LYS HA H N N 378 LYS HB2 H N N 379 LYS HB3 H N N 380 LYS HG2 H N N 381 LYS HG3 H N N 382 LYS HD2 H N N 383 LYS HD3 H N N 384 LYS HE2 H N N 385 LYS HE3 H N N 386 LYS HZ1 H N N 387 LYS HZ2 H N N 388 LYS HZ3 H N N 389 LYS HXT H N N 390 MET N N N N 391 MET CA C N S 392 MET C C N N 393 MET O O N N 394 MET CB C N N 395 MET CG C N N 396 MET SD S N N 397 MET CE C N N 398 MET OXT O N N 399 MET H H N N 400 MET H2 H N N 401 MET HA H N N 402 MET HB2 H N N 403 MET HB3 H N N 404 MET HG2 H N N 405 MET HG3 H N N 406 MET HE1 H N N 407 MET HE2 H N N 408 MET HE3 H N N 409 MET HXT H N N 410 ORP C1 C N S 411 ORP O1 O N N 412 ORP C2 C N N 413 ORP C3 C N S 414 ORP O3 O N N 415 ORP C4 C N R 416 ORP O4 O N N 417 ORP C5 C N N 418 ORP O5 O N N 419 ORP P P N N 420 ORP O1P O N N 421 ORP O2P O N N 422 ORP O3P O N N 423 ORP H1 H N N 424 ORP HO1 H N N 425 ORP H21 H N N 426 ORP H22 H N N 427 ORP H3 H N N 428 ORP HO3 H N N 429 ORP H4 H N N 430 ORP H51 H N N 431 ORP H52 H N N 432 ORP HOP2 H N N 433 ORP HOP3 H N N 434 PHE N N N N 435 PHE CA C N S 436 PHE C C N N 437 PHE O O N N 438 PHE CB C N N 439 PHE CG C Y N 440 PHE CD1 C Y N 441 PHE CD2 C Y N 442 PHE CE1 C Y N 443 PHE CE2 C Y N 444 PHE CZ C Y N 445 PHE OXT O N N 446 PHE H H N N 447 PHE H2 H N N 448 PHE HA H N N 449 PHE HB2 H N N 450 PHE HB3 H N N 451 PHE HD1 H N N 452 PHE HD2 H N N 453 PHE HE1 H N N 454 PHE HE2 H N N 455 PHE HZ H N N 456 PHE HXT H N N 457 PRO N N N N 458 PRO CA C N S 459 PRO C C N N 460 PRO O O N N 461 PRO CB C N N 462 PRO CG C N N 463 PRO CD C N N 464 PRO OXT O N N 465 PRO H H N N 466 PRO HA H N N 467 PRO HB2 H N N 468 PRO HB3 H N N 469 PRO HG2 H N N 470 PRO HG3 H N N 471 PRO HD2 H N N 472 PRO HD3 H N N 473 PRO HXT H N N 474 SER N N N N 475 SER CA C N S 476 SER C C N N 477 SER O O N N 478 SER CB C N N 479 SER OG O N N 480 SER OXT O N N 481 SER H H N N 482 SER H2 H N N 483 SER HA H N N 484 SER HB2 H N N 485 SER HB3 H N N 486 SER HG H N N 487 SER HXT H N N 488 THR N N N N 489 THR CA C N S 490 THR C C N N 491 THR O O N N 492 THR CB C N R 493 THR OG1 O N N 494 THR CG2 C N N 495 THR OXT O N N 496 THR H H N N 497 THR H2 H N N 498 THR HA H N N 499 THR HB H N N 500 THR HG1 H N N 501 THR HG21 H N N 502 THR HG22 H N N 503 THR HG23 H N N 504 THR HXT H N N 505 TRP N N N N 506 TRP CA C N S 507 TRP C C N N 508 TRP O O N N 509 TRP CB C N N 510 TRP CG C Y N 511 TRP CD1 C Y N 512 TRP CD2 C Y N 513 TRP NE1 N Y N 514 TRP CE2 C Y N 515 TRP CE3 C Y N 516 TRP CZ2 C Y N 517 TRP CZ3 C Y N 518 TRP CH2 C Y N 519 TRP OXT O N N 520 TRP H H N N 521 TRP H2 H N N 522 TRP HA H N N 523 TRP HB2 H N N 524 TRP HB3 H N N 525 TRP HD1 H N N 526 TRP HE1 H N N 527 TRP HE3 H N N 528 TRP HZ2 H N N 529 TRP HZ3 H N N 530 TRP HH2 H N N 531 TRP HXT H N N 532 TYR N N N N 533 TYR CA C N S 534 TYR C C N N 535 TYR O O N N 536 TYR CB C N N 537 TYR CG C Y N 538 TYR CD1 C Y N 539 TYR CD2 C Y N 540 TYR CE1 C Y N 541 TYR CE2 C Y N 542 TYR CZ C Y N 543 TYR OH O N N 544 TYR OXT O N N 545 TYR H H N N 546 TYR H2 H N N 547 TYR HA H N N 548 TYR HB2 H N N 549 TYR HB3 H N N 550 TYR HD1 H N N 551 TYR HD2 H N N 552 TYR HE1 H N N 553 TYR HE2 H N N 554 TYR HH H N N 555 TYR HXT H N N 556 VAL N N N N 557 VAL CA C N S 558 VAL C C N N 559 VAL O O N N 560 VAL CB C N N 561 VAL CG1 C N N 562 VAL CG2 C N N 563 VAL OXT O N N 564 VAL H H N N 565 VAL H2 H N N 566 VAL HA H N N 567 VAL HB H N N 568 VAL HG11 H N N 569 VAL HG12 H N N 570 VAL HG13 H N N 571 VAL HG21 H N N 572 VAL HG22 H N N 573 VAL HG23 H N N 574 VAL HXT H N N 575 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ACY C O doub N N 1 ACY C OXT sing N N 2 ACY C CH3 sing N N 3 ACY OXT HXT sing N N 4 ACY CH3 H1 sing N N 5 ACY CH3 H2 sing N N 6 ACY CH3 H3 sing N N 7 ALA N CA sing N N 8 ALA N H sing N N 9 ALA N H2 sing N N 10 ALA CA C sing N N 11 ALA CA CB sing N N 12 ALA CA HA sing N N 13 ALA C O doub N N 14 ALA C OXT sing N N 15 ALA CB HB1 sing N N 16 ALA CB HB2 sing N N 17 ALA CB HB3 sing N N 18 ALA OXT HXT sing N N 19 ARG N CA sing N N 20 ARG N H sing N N 21 ARG N H2 sing N N 22 ARG CA C sing N N 23 ARG CA CB sing N N 24 ARG CA HA sing N N 25 ARG C O doub N N 26 ARG C OXT sing N N 27 ARG CB CG sing N N 28 ARG CB HB2 sing N N 29 ARG CB HB3 sing N N 30 ARG CG CD sing N N 31 ARG CG HG2 sing N N 32 ARG CG HG3 sing N N 33 ARG CD NE sing N N 34 ARG CD HD2 sing N N 35 ARG CD HD3 sing N N 36 ARG NE CZ sing N N 37 ARG NE HE sing N N 38 ARG CZ NH1 sing N N 39 ARG CZ NH2 doub N N 40 ARG NH1 HH11 sing N N 41 ARG NH1 HH12 sing N N 42 ARG NH2 HH21 sing N N 43 ARG NH2 HH22 sing N N 44 ARG OXT HXT sing N N 45 ASN N CA sing N N 46 ASN N H sing N N 47 ASN N H2 sing N N 48 ASN CA C sing N N 49 ASN CA CB sing N N 50 ASN CA HA sing N N 51 ASN C O doub N N 52 ASN C OXT sing N N 53 ASN CB CG sing N N 54 ASN CB HB2 sing N N 55 ASN CB HB3 sing N N 56 ASN CG OD1 doub N N 57 ASN CG ND2 sing N N 58 ASN ND2 HD21 sing N N 59 ASN ND2 HD22 sing N N 60 ASN OXT HXT sing N N 61 ASP N CA sing N N 62 ASP N H sing N N 63 ASP N H2 sing N N 64 ASP CA C sing N N 65 ASP CA CB sing N N 66 ASP CA HA sing N N 67 ASP C O doub N N 68 ASP C OXT sing N N 69 ASP CB CG sing N N 70 ASP CB HB2 sing N N 71 ASP CB HB3 sing N N 72 ASP CG OD1 doub N N 73 ASP CG OD2 sing N N 74 ASP OD2 HD2 sing N N 75 ASP OXT HXT sing N N 76 CYS N CA sing N N 77 CYS N H sing N N 78 CYS N H2 sing N N 79 CYS CA C sing N N 80 CYS CA CB sing N N 81 CYS CA HA sing N N 82 CYS C O doub N N 83 CYS C OXT sing N N 84 CYS CB SG sing N N 85 CYS CB HB2 sing N N 86 CYS CB HB3 sing N N 87 CYS SG HG sing N N 88 CYS OXT HXT sing N N 89 DA OP3 P sing N N 90 DA OP3 HOP3 sing N N 91 DA P OP1 doub N N 92 DA P OP2 sing N N 93 DA P "O5'" sing N N 94 DA OP2 HOP2 sing N N 95 DA "O5'" "C5'" sing N N 96 DA "C5'" "C4'" sing N N 97 DA "C5'" "H5'" sing N N 98 DA "C5'" "H5''" sing N N 99 DA "C4'" "O4'" sing N N 100 DA "C4'" "C3'" sing N N 101 DA "C4'" "H4'" sing N N 102 DA "O4'" "C1'" sing N N 103 DA "C3'" "O3'" sing N N 104 DA "C3'" "C2'" sing N N 105 DA "C3'" "H3'" sing N N 106 DA "O3'" "HO3'" sing N N 107 DA "C2'" "C1'" sing N N 108 DA "C2'" "H2'" sing N N 109 DA "C2'" "H2''" sing N N 110 DA "C1'" N9 sing N N 111 DA "C1'" "H1'" sing N N 112 DA N9 C8 sing Y N 113 DA N9 C4 sing Y N 114 DA C8 N7 doub Y N 115 DA C8 H8 sing N N 116 DA N7 C5 sing Y N 117 DA C5 C6 sing Y N 118 DA C5 C4 doub Y N 119 DA C6 N6 sing N N 120 DA C6 N1 doub Y N 121 DA N6 H61 sing N N 122 DA N6 H62 sing N N 123 DA N1 C2 sing Y N 124 DA C2 N3 doub Y N 125 DA C2 H2 sing N N 126 DA N3 C4 sing Y N 127 DC OP3 P sing N N 128 DC OP3 HOP3 sing N N 129 DC P OP1 doub N N 130 DC P OP2 sing N N 131 DC P "O5'" sing N N 132 DC OP2 HOP2 sing N N 133 DC "O5'" "C5'" sing N N 134 DC "C5'" "C4'" sing N N 135 DC "C5'" "H5'" sing N N 136 DC "C5'" "H5''" sing N N 137 DC "C4'" "O4'" sing N N 138 DC "C4'" "C3'" sing N N 139 DC "C4'" "H4'" sing N N 140 DC "O4'" "C1'" sing N N 141 DC "C3'" "O3'" sing N N 142 DC "C3'" "C2'" sing N N 143 DC "C3'" "H3'" sing N N 144 DC "O3'" "HO3'" sing N N 145 DC "C2'" "C1'" sing N N 146 DC "C2'" "H2'" sing N N 147 DC "C2'" "H2''" sing N N 148 DC "C1'" N1 sing N N 149 DC "C1'" "H1'" sing N N 150 DC N1 C2 sing N N 151 DC N1 C6 sing N N 152 DC C2 O2 doub N N 153 DC C2 N3 sing N N 154 DC N3 C4 doub N N 155 DC C4 N4 sing N N 156 DC C4 C5 sing N N 157 DC N4 H41 sing N N 158 DC N4 H42 sing N N 159 DC C5 C6 doub N N 160 DC C5 H5 sing N N 161 DC C6 H6 sing N N 162 DG OP3 P sing N N 163 DG OP3 HOP3 sing N N 164 DG P OP1 doub N N 165 DG P OP2 sing N N 166 DG P "O5'" sing N N 167 DG OP2 HOP2 sing N N 168 DG "O5'" "C5'" sing N N 169 DG "C5'" "C4'" sing N N 170 DG "C5'" "H5'" sing N N 171 DG "C5'" "H5''" sing N N 172 DG "C4'" "O4'" sing N N 173 DG "C4'" "C3'" sing N N 174 DG "C4'" "H4'" sing N N 175 DG "O4'" "C1'" sing N N 176 DG "C3'" "O3'" sing N N 177 DG "C3'" "C2'" sing N N 178 DG "C3'" "H3'" sing N N 179 DG "O3'" "HO3'" sing N N 180 DG "C2'" "C1'" sing N N 181 DG "C2'" "H2'" sing N N 182 DG "C2'" "H2''" sing N N 183 DG "C1'" N9 sing N N 184 DG "C1'" "H1'" sing N N 185 DG N9 C8 sing Y N 186 DG N9 C4 sing Y N 187 DG C8 N7 doub Y N 188 DG C8 H8 sing N N 189 DG N7 C5 sing Y N 190 DG C5 C6 sing N N 191 DG C5 C4 doub Y N 192 DG C6 O6 doub N N 193 DG C6 N1 sing N N 194 DG N1 C2 sing N N 195 DG N1 H1 sing N N 196 DG C2 N2 sing N N 197 DG C2 N3 doub N N 198 DG N2 H21 sing N N 199 DG N2 H22 sing N N 200 DG N3 C4 sing N N 201 DT OP3 P sing N N 202 DT OP3 HOP3 sing N N 203 DT P OP1 doub N N 204 DT P OP2 sing N N 205 DT P "O5'" sing N N 206 DT OP2 HOP2 sing N N 207 DT "O5'" "C5'" sing N N 208 DT "C5'" "C4'" sing N N 209 DT "C5'" "H5'" sing N N 210 DT "C5'" "H5''" sing N N 211 DT "C4'" "O4'" sing N N 212 DT "C4'" "C3'" sing N N 213 DT "C4'" "H4'" sing N N 214 DT "O4'" "C1'" sing N N 215 DT "C3'" "O3'" sing N N 216 DT "C3'" "C2'" sing N N 217 DT "C3'" "H3'" sing N N 218 DT "O3'" "HO3'" sing N N 219 DT "C2'" "C1'" sing N N 220 DT "C2'" "H2'" sing N N 221 DT "C2'" "H2''" sing N N 222 DT "C1'" N1 sing N N 223 DT "C1'" "H1'" sing N N 224 DT N1 C2 sing N N 225 DT N1 C6 sing N N 226 DT C2 O2 doub N N 227 DT C2 N3 sing N N 228 DT N3 C4 sing N N 229 DT N3 H3 sing N N 230 DT C4 O4 doub N N 231 DT C4 C5 sing N N 232 DT C5 C7 sing N N 233 DT C5 C6 doub N N 234 DT C7 H71 sing N N 235 DT C7 H72 sing N N 236 DT C7 H73 sing N N 237 DT C6 H6 sing N N 238 EDO C1 O1 sing N N 239 EDO C1 C2 sing N N 240 EDO C1 H11 sing N N 241 EDO C1 H12 sing N N 242 EDO O1 HO1 sing N N 243 EDO C2 O2 sing N N 244 EDO C2 H21 sing N N 245 EDO C2 H22 sing N N 246 EDO O2 HO2 sing N N 247 GLN N CA sing N N 248 GLN N H sing N N 249 GLN N H2 sing N N 250 GLN CA C sing N N 251 GLN CA CB sing N N 252 GLN CA HA sing N N 253 GLN C O doub N N 254 GLN C OXT sing N N 255 GLN CB CG sing N N 256 GLN CB HB2 sing N N 257 GLN CB HB3 sing N N 258 GLN CG CD sing N N 259 GLN CG HG2 sing N N 260 GLN CG HG3 sing N N 261 GLN CD OE1 doub N N 262 GLN CD NE2 sing N N 263 GLN NE2 HE21 sing N N 264 GLN NE2 HE22 sing N N 265 GLN OXT HXT sing N N 266 GLU N CA sing N N 267 GLU N H sing N N 268 GLU N H2 sing N N 269 GLU CA C sing N N 270 GLU CA CB sing N N 271 GLU CA HA sing N N 272 GLU C O doub N N 273 GLU C OXT sing N N 274 GLU CB CG sing N N 275 GLU CB HB2 sing N N 276 GLU CB HB3 sing N N 277 GLU CG CD sing N N 278 GLU CG HG2 sing N N 279 GLU CG HG3 sing N N 280 GLU CD OE1 doub N N 281 GLU CD OE2 sing N N 282 GLU OE2 HE2 sing N N 283 GLU OXT HXT sing N N 284 GLY N CA sing N N 285 GLY N H sing N N 286 GLY N H2 sing N N 287 GLY CA C sing N N 288 GLY CA HA2 sing N N 289 GLY CA HA3 sing N N 290 GLY C O doub N N 291 GLY C OXT sing N N 292 GLY OXT HXT sing N N 293 HIS N CA sing N N 294 HIS N H sing N N 295 HIS N H2 sing N N 296 HIS CA C sing N N 297 HIS CA CB sing N N 298 HIS CA HA sing N N 299 HIS C O doub N N 300 HIS C OXT sing N N 301 HIS CB CG sing N N 302 HIS CB HB2 sing N N 303 HIS CB HB3 sing N N 304 HIS CG ND1 sing Y N 305 HIS CG CD2 doub Y N 306 HIS ND1 CE1 doub Y N 307 HIS ND1 HD1 sing N N 308 HIS CD2 NE2 sing Y N 309 HIS CD2 HD2 sing N N 310 HIS CE1 NE2 sing Y N 311 HIS CE1 HE1 sing N N 312 HIS NE2 HE2 sing N N 313 HIS OXT HXT sing N N 314 HOH O H1 sing N N 315 HOH O H2 sing N N 316 ILE N CA sing N N 317 ILE N H sing N N 318 ILE N H2 sing N N 319 ILE CA C sing N N 320 ILE CA CB sing N N 321 ILE CA HA sing N N 322 ILE C O doub N N 323 ILE C OXT sing N N 324 ILE CB CG1 sing N N 325 ILE CB CG2 sing N N 326 ILE CB HB sing N N 327 ILE CG1 CD1 sing N N 328 ILE CG1 HG12 sing N N 329 ILE CG1 HG13 sing N N 330 ILE CG2 HG21 sing N N 331 ILE CG2 HG22 sing N N 332 ILE CG2 HG23 sing N N 333 ILE CD1 HD11 sing N N 334 ILE CD1 HD12 sing N N 335 ILE CD1 HD13 sing N N 336 ILE OXT HXT sing N N 337 LEU N CA sing N N 338 LEU N H sing N N 339 LEU N H2 sing N N 340 LEU CA C sing N N 341 LEU CA CB sing N N 342 LEU CA HA sing N N 343 LEU C O doub N N 344 LEU C OXT sing N N 345 LEU CB CG sing N N 346 LEU CB HB2 sing N N 347 LEU CB HB3 sing N N 348 LEU CG CD1 sing N N 349 LEU CG CD2 sing N N 350 LEU CG HG sing N N 351 LEU CD1 HD11 sing N N 352 LEU CD1 HD12 sing N N 353 LEU CD1 HD13 sing N N 354 LEU CD2 HD21 sing N N 355 LEU CD2 HD22 sing N N 356 LEU CD2 HD23 sing N N 357 LEU OXT HXT sing N N 358 LYS N CA sing N N 359 LYS N H sing N N 360 LYS N H2 sing N N 361 LYS CA C sing N N 362 LYS CA CB sing N N 363 LYS CA HA sing N N 364 LYS C O doub N N 365 LYS C OXT sing N N 366 LYS CB CG sing N N 367 LYS CB HB2 sing N N 368 LYS CB HB3 sing N N 369 LYS CG CD sing N N 370 LYS CG HG2 sing N N 371 LYS CG HG3 sing N N 372 LYS CD CE sing N N 373 LYS CD HD2 sing N N 374 LYS CD HD3 sing N N 375 LYS CE NZ sing N N 376 LYS CE HE2 sing N N 377 LYS CE HE3 sing N N 378 LYS NZ HZ1 sing N N 379 LYS NZ HZ2 sing N N 380 LYS NZ HZ3 sing N N 381 LYS OXT HXT sing N N 382 MET N CA sing N N 383 MET N H sing N N 384 MET N H2 sing N N 385 MET CA C sing N N 386 MET CA CB sing N N 387 MET CA HA sing N N 388 MET C O doub N N 389 MET C OXT sing N N 390 MET CB CG sing N N 391 MET CB HB2 sing N N 392 MET CB HB3 sing N N 393 MET CG SD sing N N 394 MET CG HG2 sing N N 395 MET CG HG3 sing N N 396 MET SD CE sing N N 397 MET CE HE1 sing N N 398 MET CE HE2 sing N N 399 MET CE HE3 sing N N 400 MET OXT HXT sing N N 401 ORP C1 O1 sing N N 402 ORP C1 C2 sing N N 403 ORP C1 O4 sing N N 404 ORP C1 H1 sing N N 405 ORP O1 HO1 sing N N 406 ORP C2 C3 sing N N 407 ORP C2 H21 sing N N 408 ORP C2 H22 sing N N 409 ORP C3 O3 sing N N 410 ORP C3 C4 sing N N 411 ORP C3 H3 sing N N 412 ORP O3 HO3 sing N N 413 ORP C4 O4 sing N N 414 ORP C4 C5 sing N N 415 ORP C4 H4 sing N N 416 ORP C5 O5 sing N N 417 ORP C5 H51 sing N N 418 ORP C5 H52 sing N N 419 ORP O5 P sing N N 420 ORP P O1P doub N N 421 ORP P O2P sing N N 422 ORP P O3P sing N N 423 ORP O2P HOP2 sing N N 424 ORP O3P HOP3 sing N N 425 PHE N CA sing N N 426 PHE N H sing N N 427 PHE N H2 sing N N 428 PHE CA C sing N N 429 PHE CA CB sing N N 430 PHE CA HA sing N N 431 PHE C O doub N N 432 PHE C OXT sing N N 433 PHE CB CG sing N N 434 PHE CB HB2 sing N N 435 PHE CB HB3 sing N N 436 PHE CG CD1 doub Y N 437 PHE CG CD2 sing Y N 438 PHE CD1 CE1 sing Y N 439 PHE CD1 HD1 sing N N 440 PHE CD2 CE2 doub Y N 441 PHE CD2 HD2 sing N N 442 PHE CE1 CZ doub Y N 443 PHE CE1 HE1 sing N N 444 PHE CE2 CZ sing Y N 445 PHE CE2 HE2 sing N N 446 PHE CZ HZ sing N N 447 PHE OXT HXT sing N N 448 PRO N CA sing N N 449 PRO N CD sing N N 450 PRO N H sing N N 451 PRO CA C sing N N 452 PRO CA CB sing N N 453 PRO CA HA sing N N 454 PRO C O doub N N 455 PRO C OXT sing N N 456 PRO CB CG sing N N 457 PRO CB HB2 sing N N 458 PRO CB HB3 sing N N 459 PRO CG CD sing N N 460 PRO CG HG2 sing N N 461 PRO CG HG3 sing N N 462 PRO CD HD2 sing N N 463 PRO CD HD3 sing N N 464 PRO OXT HXT sing N N 465 SER N CA sing N N 466 SER N H sing N N 467 SER N H2 sing N N 468 SER CA C sing N N 469 SER CA CB sing N N 470 SER CA HA sing N N 471 SER C O doub N N 472 SER C OXT sing N N 473 SER CB OG sing N N 474 SER CB HB2 sing N N 475 SER CB HB3 sing N N 476 SER OG HG sing N N 477 SER OXT HXT sing N N 478 THR N CA sing N N 479 THR N H sing N N 480 THR N H2 sing N N 481 THR CA C sing N N 482 THR CA CB sing N N 483 THR CA HA sing N N 484 THR C O doub N N 485 THR C OXT sing N N 486 THR CB OG1 sing N N 487 THR CB CG2 sing N N 488 THR CB HB sing N N 489 THR OG1 HG1 sing N N 490 THR CG2 HG21 sing N N 491 THR CG2 HG22 sing N N 492 THR CG2 HG23 sing N N 493 THR OXT HXT sing N N 494 TRP N CA sing N N 495 TRP N H sing N N 496 TRP N H2 sing N N 497 TRP CA C sing N N 498 TRP CA CB sing N N 499 TRP CA HA sing N N 500 TRP C O doub N N 501 TRP C OXT sing N N 502 TRP CB CG sing N N 503 TRP CB HB2 sing N N 504 TRP CB HB3 sing N N 505 TRP CG CD1 doub Y N 506 TRP CG CD2 sing Y N 507 TRP CD1 NE1 sing Y N 508 TRP CD1 HD1 sing N N 509 TRP CD2 CE2 doub Y N 510 TRP CD2 CE3 sing Y N 511 TRP NE1 CE2 sing Y N 512 TRP NE1 HE1 sing N N 513 TRP CE2 CZ2 sing Y N 514 TRP CE3 CZ3 doub Y N 515 TRP CE3 HE3 sing N N 516 TRP CZ2 CH2 doub Y N 517 TRP CZ2 HZ2 sing N N 518 TRP CZ3 CH2 sing Y N 519 TRP CZ3 HZ3 sing N N 520 TRP CH2 HH2 sing N N 521 TRP OXT HXT sing N N 522 TYR N CA sing N N 523 TYR N H sing N N 524 TYR N H2 sing N N 525 TYR CA C sing N N 526 TYR CA CB sing N N 527 TYR CA HA sing N N 528 TYR C O doub N N 529 TYR C OXT sing N N 530 TYR CB CG sing N N 531 TYR CB HB2 sing N N 532 TYR CB HB3 sing N N 533 TYR CG CD1 doub Y N 534 TYR CG CD2 sing Y N 535 TYR CD1 CE1 sing Y N 536 TYR CD1 HD1 sing N N 537 TYR CD2 CE2 doub Y N 538 TYR CD2 HD2 sing N N 539 TYR CE1 CZ doub Y N 540 TYR CE1 HE1 sing N N 541 TYR CE2 CZ sing Y N 542 TYR CE2 HE2 sing N N 543 TYR CZ OH sing N N 544 TYR OH HH sing N N 545 TYR OXT HXT sing N N 546 VAL N CA sing N N 547 VAL N H sing N N 548 VAL N H2 sing N N 549 VAL CA C sing N N 550 VAL CA CB sing N N 551 VAL CA HA sing N N 552 VAL C O doub N N 553 VAL C OXT sing N N 554 VAL CB CG1 sing N N 555 VAL CB CG2 sing N N 556 VAL CB HB sing N N 557 VAL CG1 HG11 sing N N 558 VAL CG1 HG12 sing N N 559 VAL CG1 HG13 sing N N 560 VAL CG2 HG21 sing N N 561 VAL CG2 HG22 sing N N 562 VAL CG2 HG23 sing N N 563 VAL OXT HXT sing N N 564 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4Z7B 'double helix' 4Z7B 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 C DG 28 1_555 -0.053 0.024 0.226 5.131 -5.563 -5.518 1 C_DC1:DG28_D C 1 ? D 28 ? 19 1 1 B DA 2 1_555 C DT 27 1_555 -0.189 -0.052 0.100 9.015 -7.584 8.303 2 C_DA2:DT27_D C 2 ? D 27 ? 20 1 1 B DG 3 1_555 C DC 26 1_555 -0.210 -0.167 0.118 6.649 -17.433 1.404 3 C_DG3:DC26_D C 3 ? D 26 ? 19 1 1 B DC 4 1_555 C DG 25 1_555 -0.028 -0.140 0.147 -6.379 -17.955 0.586 4 C_DC4:DG25_D C 4 ? D 25 ? 19 1 1 B DT 5 1_555 C DA 24 1_555 0.203 -0.175 0.254 -9.840 -12.196 -3.801 5 C_DT5:DA24_D C 5 ? D 24 ? 20 1 1 B DC 6 1_555 C DG 23 1_555 -0.481 -0.164 0.307 -9.693 -7.689 -2.137 6 C_DC6:DG23_D C 6 ? D 23 ? 19 1 1 B DT 7 1_555 C DA 22 1_555 0.430 -0.103 -0.021 -2.740 -10.212 -8.301 7 C_DT7:DA22_D C 7 ? D 22 ? 20 1 1 B DG 8 1_555 C DC 21 1_555 -0.801 -0.380 -0.079 -9.162 -5.757 -1.047 8 C_DG8:DC21_D C 8 ? D 21 ? 19 1 1 B DT 9 1_555 C DA 20 1_555 -0.411 -0.196 0.046 -2.618 -7.965 -1.062 9 C_DT9:DA20_D C 9 ? D 20 ? 20 1 1 B DA 10 1_555 C DT 19 1_555 -0.047 -0.172 -0.013 0.334 -8.609 2.790 10 C_DA10:DT19_D C 10 ? D 19 ? 20 1 1 B DC 11 1_555 C DG 18 1_555 0.420 -0.185 -0.320 10.984 -11.922 0.834 11 C_DC11:DG18_D C 11 ? D 18 ? 19 1 1 B DT 13 1_555 C DA 16 1_555 -0.398 -0.073 0.029 -12.678 -11.134 -1.157 12 C_DT13:DA16_D C 13 ? D 16 ? 20 1 1 B DG 14 1_555 C DC 15 1_555 -0.230 -0.202 -0.239 -4.117 -8.582 -0.111 13 C_DG14:DC15_D C 14 ? D 15 ? 19 1 1 B DA 15 1_555 C DT 14 1_555 -0.139 -0.335 -0.089 -2.592 -13.881 -0.649 14 C_DA15:DT14_D C 15 ? D 14 ? 20 1 1 B DG 16 1_555 C DC 13 1_555 -0.465 -0.169 0.354 5.453 -12.154 3.559 15 C_DG16:DC13_D C 16 ? D 13 ? 19 1 1 B DC 17 1_555 C DG 12 1_555 0.603 -0.259 0.090 0.148 -15.897 3.142 16 C_DC17:DG12_D C 17 ? D 12 ? 19 1 1 B DG 18 1_555 C DC 11 1_555 -0.136 -0.225 0.009 1.611 -16.569 0.916 17 C_DG18:DC11_D C 18 ? D 11 ? 19 1 1 B DA 19 1_555 C DT 10 1_555 0.185 -0.106 -0.195 -5.155 -12.560 1.749 18 C_DA19:DT10_D C 19 ? D 10 ? 20 1 1 B DT 20 1_555 C DA 9 1_555 -0.322 -0.177 0.027 -1.068 -13.740 -0.074 19 C_DT20:DA9_D C 20 ? D 9 ? 20 1 1 B DG 21 1_555 C DC 8 1_555 -0.747 -0.444 -0.135 -4.251 -9.284 -3.588 20 C_DG21:DC8_D C 21 ? D 8 ? 19 1 1 B DG 22 1_555 C DC 7 1_555 -0.389 -0.183 -0.125 -0.138 -11.876 2.995 21 C_DG22:DC7_D C 22 ? D 7 ? 19 1 1 B DA 23 1_555 C DT 6 1_555 -0.022 -0.021 -0.021 -1.446 -9.640 -3.910 22 C_DA23:DT6_D C 23 ? D 6 ? 20 1 1 B DC 24 1_555 C DG 5 1_555 0.141 -0.141 -0.096 9.458 -7.434 1.160 23 C_DC24:DG5_D C 24 ? D 5 ? 19 1 1 B DA 25 1_555 C DT 4 1_555 -0.377 -0.309 -0.048 10.458 -10.632 -2.063 24 C_DA25:DT4_D C 25 ? D 4 ? 20 1 1 B DG 26 1_555 C DC 3 1_555 -0.902 -0.276 0.156 10.072 -11.050 2.125 25 C_DG26:DC3_D C 26 ? D 3 ? 19 1 1 B DC 27 1_555 C DG 2 1_555 0.316 -0.277 0.124 2.057 -15.596 -2.602 26 C_DC27:DG2_D C 27 ? D 2 ? 19 1 1 B DT 28 1_555 C DA 1 1_555 0.198 -0.282 0.169 -2.142 -19.305 0.836 27 C_DT28:DA1_D C 28 ? D 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 C DG 28 1_555 B DA 2 1_555 C DT 27 1_555 1.029 0.321 3.223 6.915 -0.633 38.738 0.554 -0.698 3.346 -0.945 -10.324 39.331 1 CC_DC1DA2:DT27DG28_DD C 1 ? D 28 ? C 2 ? D 27 ? 1 B DA 2 1_555 C DT 27 1_555 B DG 3 1_555 C DC 26 1_555 -0.277 -0.215 3.380 -2.762 6.048 33.344 -1.366 0.018 3.303 10.412 4.755 33.982 2 CC_DA2DG3:DC26DT27_DD C 2 ? D 27 ? C 3 ? D 26 ? 1 B DG 3 1_555 C DC 26 1_555 B DC 4 1_555 C DG 25 1_555 -0.351 -0.633 3.485 -0.373 0.466 35.208 -1.119 0.521 3.480 0.770 0.616 35.213 3 CC_DG3DC4:DG25DC26_DD C 3 ? D 26 ? C 4 ? D 25 ? 1 B DC 4 1_555 C DG 25 1_555 B DT 5 1_555 C DA 24 1_555 -0.335 -0.260 3.392 -0.544 8.773 36.392 -1.594 0.449 3.249 13.801 0.856 37.403 4 CC_DC4DT5:DA24DG25_DD C 4 ? D 25 ? C 5 ? D 24 ? 1 B DT 5 1_555 C DA 24 1_555 B DC 6 1_555 C DG 23 1_555 0.400 0.193 3.244 1.072 0.869 36.018 0.190 -0.495 3.258 1.405 -1.733 36.043 5 CC_DT5DC6:DG23DA24_DD C 5 ? D 24 ? C 6 ? D 23 ? 1 B DC 6 1_555 C DG 23 1_555 B DT 7 1_555 C DA 22 1_555 -0.645 0.126 3.117 -0.028 2.610 33.920 -0.181 1.098 3.118 4.465 0.048 34.017 6 CC_DC6DT7:DA22DG23_DD C 6 ? D 23 ? C 7 ? D 22 ? 1 B DT 7 1_555 C DA 22 1_555 B DG 8 1_555 C DC 21 1_555 0.446 0.423 3.369 -1.123 5.773 35.464 -0.170 -0.890 3.379 9.398 1.828 35.933 7 CC_DT7DG8:DC21DA22_DD C 7 ? D 22 ? C 8 ? D 21 ? 1 B DG 8 1_555 C DC 21 1_555 B DT 9 1_555 C DA 20 1_555 -0.250 -0.212 3.133 -0.970 1.884 30.441 -0.762 0.291 3.121 3.583 1.845 30.513 8 CC_DG8DT9:DA20DC21_DD C 8 ? D 21 ? C 9 ? D 20 ? 1 B DT 9 1_555 C DA 20 1_555 B DA 10 1_555 C DT 19 1_555 -0.055 0.763 3.271 -0.049 2.928 37.950 0.795 0.078 3.319 4.495 0.075 38.059 9 CC_DT9DA10:DT19DA20_DD C 9 ? D 20 ? C 10 ? D 19 ? 1 B DA 10 1_555 C DT 19 1_555 B DC 11 1_555 C DG 18 1_555 0.108 0.137 2.988 3.190 -0.404 33.629 0.295 0.286 2.984 -0.697 -5.497 33.778 10 CC_DA10DC11:DG18DT19_DD C 10 ? D 19 ? C 11 ? D 18 ? 1 B DT 13 1_555 C DA 16 1_555 B DG 14 1_555 C DC 15 1_555 0.854 1.276 3.214 2.749 6.088 36.498 1.171 -0.966 3.429 9.621 -4.345 37.084 11 CC_DT13DG14:DC15DA16_DD C 13 ? D 16 ? C 14 ? D 15 ? 1 B DG 14 1_555 C DC 15 1_555 B DA 15 1_555 C DT 14 1_555 -1.032 0.541 3.227 -5.569 5.705 34.527 0.030 0.858 3.391 9.457 9.231 35.409 12 CC_DG14DA15:DT14DC15_DD C 14 ? D 15 ? C 15 ? D 14 ? 1 B DA 15 1_555 C DT 14 1_555 B DG 16 1_555 C DC 13 1_555 0.632 -0.010 3.082 -3.487 2.452 31.829 -0.429 -1.725 2.989 4.446 6.322 32.106 13 CC_DA15DG16:DC13DT14_DD C 15 ? D 14 ? C 16 ? D 13 ? 1 B DG 16 1_555 C DC 13 1_555 B DC 17 1_555 C DG 12 1_555 -0.694 -0.022 3.350 0.719 0.111 42.710 -0.041 1.027 3.338 0.153 -0.987 42.716 14 CC_DG16DC17:DG12DC13_DD C 16 ? D 13 ? C 17 ? D 12 ? 1 B DC 17 1_555 C DG 12 1_555 B DG 18 1_555 C DC 11 1_555 -0.268 0.646 3.246 0.719 13.062 29.461 -1.254 0.617 3.229 24.235 -1.335 32.176 15 CC_DC17DG18:DC11DG12_DD C 17 ? D 12 ? C 18 ? D 11 ? 1 B DG 18 1_555 C DC 11 1_555 B DA 19 1_555 C DT 10 1_555 -0.134 -0.045 3.370 0.757 2.950 40.494 -0.403 0.280 3.356 4.256 -1.091 40.603 16 CC_DG18DA19:DT10DC11_DD C 18 ? D 11 ? C 19 ? D 10 ? 1 B DA 19 1_555 C DT 10 1_555 B DT 20 1_555 C DA 9 1_555 -0.449 -0.450 3.146 -1.977 1.048 26.094 -1.267 0.475 3.151 2.316 4.369 26.188 17 CC_DA19DT20:DA9DT10_DD C 19 ? D 10 ? C 20 ? D 9 ? 1 B DT 20 1_555 C DA 9 1_555 B DG 21 1_555 C DC 8 1_555 0.476 0.504 3.397 1.176 6.962 34.805 -0.250 -0.598 3.444 11.492 -1.942 35.492 18 CC_DT20DG21:DC8DA9_DD C 20 ? D 9 ? C 21 ? D 8 ? 1 B DG 21 1_555 C DC 8 1_555 B DG 22 1_555 C DC 7 1_555 -0.301 0.689 3.180 -2.867 0.911 38.830 0.926 0.112 3.208 1.368 4.305 38.941 19 CC_DG21DG22:DC7DC8_DD C 21 ? D 8 ? C 22 ? D 7 ? 1 B DG 22 1_555 C DC 7 1_555 B DA 23 1_555 C DT 6 1_555 -0.688 0.084 3.282 -3.588 1.663 37.686 -0.086 0.594 3.331 2.566 5.535 37.885 20 CC_DG22DA23:DT6DC7_DD C 22 ? D 7 ? C 23 ? D 6 ? 1 B DA 23 1_555 C DT 6 1_555 B DC 24 1_555 C DG 5 1_555 1.027 -0.398 3.082 0.920 1.327 31.911 -0.950 -1.709 3.091 2.412 -1.673 31.951 21 CC_DA23DC24:DG5DT6_DD C 23 ? D 6 ? C 24 ? D 5 ? 1 B DC 24 1_555 C DG 5 1_555 B DA 25 1_555 C DT 4 1_555 -0.367 0.424 3.348 0.759 6.737 31.903 -0.459 0.791 3.355 12.086 -1.361 32.597 22 CC_DC24DA25:DT4DG5_DD C 24 ? D 5 ? C 25 ? D 4 ? 1 B DA 25 1_555 C DT 4 1_555 B DG 26 1_555 C DC 3 1_555 -0.163 -0.083 3.276 -5.961 5.893 33.415 -1.063 -0.659 3.197 10.054 10.170 34.421 23 CC_DA25DG26:DC3DT4_DD C 25 ? D 4 ? C 26 ? D 3 ? 1 B DG 26 1_555 C DC 3 1_555 B DC 27 1_555 C DG 2 1_555 -0.195 -0.361 3.497 -0.715 3.055 35.065 -1.082 0.209 3.458 5.059 1.184 35.201 24 CC_DG26DC27:DG2DC3_DD C 26 ? D 3 ? C 27 ? D 2 ? 1 B DC 27 1_555 C DG 2 1_555 B DT 28 1_555 C DA 1 1_555 0.185 -0.262 3.375 2.703 5.368 34.386 -1.273 0.114 3.303 8.995 -4.530 34.892 25 CC_DC27DT28:DA1DG2_DD C 27 ? D 2 ? C 28 ? D 1 ? # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number R01-GM72711 _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 1,2-ETHANEDIOL EDO 5 'ACETIC ACID' ACY 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4FNC _pdbx_initial_refinement_model.details ? #