data_4ZCE # _entry.id 4ZCE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.320 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4ZCE WWPDB D_1000209032 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4ZCE _pdbx_database_status.recvd_initial_deposition_date 2015-04-15 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Pedersen, L.C.' 1 'Mueller, G.A.' 2 'Randall, T.A.' 3 'Glesner, J.' 4 'Perera, L.' 5 'Edwards, L.L.' 6 'Chapman, M.D.' 7 'London, R.E.' 8 'Pomes, A.' 9 # _citation.abstract ? _citation.abstract_id_CAS ? _citation.book_id_ISBN ? _citation.book_publisher ? _citation.book_publisher_city ? _citation.book_title ? _citation.coordinate_linkage ? _citation.country US _citation.database_id_Medline ? _citation.details ? _citation.id primary _citation.journal_abbrev 'Clin Exp Allergy' _citation.journal_id_ASTM ? _citation.journal_id_CSD ? _citation.journal_id_ISSN 1365-2222 _citation.journal_full ? _citation.journal_issue ? _citation.journal_volume 46 _citation.language ? _citation.page_first 365 _citation.page_last 376 _citation.title 'Serological, genomic and structural analyses of the major mite allergen Der p 23.' _citation.year 2016 _citation.database_id_CSD ? _citation.pdbx_database_id_DOI 10.1111/cea.12680 _citation.pdbx_database_id_PubMed 26602749 _citation.unpublished_flag ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Mueller, G.A.' 1 ? primary 'Randall, T.A.' 2 ? primary 'Glesner, J.' 3 ? primary 'Pedersen, L.C.' 4 ? primary 'Perera, L.' 5 ? primary 'Edwards, L.L.' 6 ? primary 'DeRose, E.F.' 7 ? primary 'Chapman, M.D.' 8 ? primary 'London, R.E.' 9 ? primary 'Pomes, A.' 10 ? # _cell.angle_alpha 90.00 _cell.angle_alpha_esd ? _cell.angle_beta 95.47 _cell.angle_beta_esd ? _cell.angle_gamma 90.00 _cell.angle_gamma_esd ? _cell.entry_id 4ZCE _cell.details ? _cell.formula_units_Z ? _cell.length_a 25.283 _cell.length_a_esd ? _cell.length_b 53.519 _cell.length_b_esd ? _cell.length_c 40.395 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 4 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZCE _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Dust mite allergen' 5943.508 2 ? ? 'UNP residues 44-90' ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 1 ? ? ? ? 3 water nat water 18.015 200 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code SFTKFECPSRFGYFADPKDPHKFYICSNWEAVHKDCPGNTRWNEDEETCT _entity_poly.pdbx_seq_one_letter_code_can SFTKFECPSRFGYFADPKDPHKFYICSNWEAVHKDCPGNTRWNEDEETCT _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 PHE n 1 3 THR n 1 4 LYS n 1 5 PHE n 1 6 GLU n 1 7 CYS n 1 8 PRO n 1 9 SER n 1 10 ARG n 1 11 PHE n 1 12 GLY n 1 13 TYR n 1 14 PHE n 1 15 ALA n 1 16 ASP n 1 17 PRO n 1 18 LYS n 1 19 ASP n 1 20 PRO n 1 21 HIS n 1 22 LYS n 1 23 PHE n 1 24 TYR n 1 25 ILE n 1 26 CYS n 1 27 SER n 1 28 ASN n 1 29 TRP n 1 30 GLU n 1 31 ALA n 1 32 VAL n 1 33 HIS n 1 34 LYS n 1 35 ASP n 1 36 CYS n 1 37 PRO n 1 38 GLY n 1 39 ASN n 1 40 THR n 1 41 ARG n 1 42 TRP n 1 43 ASN n 1 44 GLU n 1 45 ASP n 1 46 GLU n 1 47 GLU n 1 48 THR n 1 49 CYS n 1 50 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 50 _entity_src_gen.gene_src_common_name 'European house dust mite' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Dermatophagoides pteronyssinus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6956 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Rosetta2 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pDEST _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code L7N6F8_DERPT _struct_ref.pdbx_db_accession L7N6F8 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code KFECPSRFGYFADPKDPHKFYICSNWEAVHKDCPGNTRWNEDEETCT _struct_ref.pdbx_align_begin 44 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4ZCE A 4 ? 50 ? L7N6F8 44 ? 90 ? 44 90 2 1 4ZCE B 4 ? 50 ? L7N6F8 44 ? 90 ? 44 90 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4ZCE SER A 1 ? UNP L7N6F8 ? ? 'expression tag' 41 1 1 4ZCE PHE A 2 ? UNP L7N6F8 ? ? 'expression tag' 42 2 1 4ZCE THR A 3 ? UNP L7N6F8 ? ? 'expression tag' 43 3 2 4ZCE SER B 1 ? UNP L7N6F8 ? ? 'expression tag' 41 4 2 4ZCE PHE B 2 ? UNP L7N6F8 ? ? 'expression tag' 42 5 2 4ZCE THR B 3 ? UNP L7N6F8 ? ? 'expression tag' 43 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4ZCE _exptl.crystals_number ? _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.29 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 46.26 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'SMALL TUBES' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '50% PBS buffer for two months in' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 173 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details SAD _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'RIGAKU SATURN 944+' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2014-04-09 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.514 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source 'ROTATING ANODE' _diffrn_source.target ? _diffrn_source.type 'RIGAKU MICROMAX-007 HF' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 1.514 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_synchrotron_site ? # _reflns.B_iso_Wilson_estimate ? _reflns.entry_id 4ZCE _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.55 _reflns.d_resolution_low 50.0 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all ? _reflns.number_obs 15162 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.percent_possible_obs 96.9 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 9.5 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value 0.058 _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 18.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.d_res_high 1.55 _reflns_shell.d_res_low 1.58 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_gt ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_gt ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rsym_value 0.225 _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_rejects ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_gt ? _reflns_shell.percent_possible_obs ? # _refine.aniso_B[1][1] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][2] ? _refine.aniso_B[2][3] ? _refine.aniso_B[3][3] ? _refine.B_iso_max ? _refine.B_iso_mean ? _refine.B_iso_min ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.details ? _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4ZCE _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.550 _refine.ls_d_res_low 26.759 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all ? _refine.ls_number_reflns_obs 15142 _refine.ls_number_reflns_R_free 714 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 96.94 _refine.ls_percent_reflns_R_free 4.72 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1649 _refine.ls_R_factor_R_free 0.1903 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.1636 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max ? _refine.occupancy_min ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.38 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_R_Free_selection_details 'Random selection' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error 20.49 _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B ? _refine.overall_SU_ML 0.10 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 789 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 200 _refine_hist.number_atoms_total 993 _refine_hist.d_res_high 1.550 _refine_hist.d_res_low 26.759 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 ? 859 ? f_bond_d ? ? 'X-RAY DIFFRACTION' ? 1.219 ? 1169 ? f_angle_d ? ? 'X-RAY DIFFRACTION' ? 12.069 ? 304 ? f_dihedral_angle_d ? ? 'X-RAY DIFFRACTION' ? 0.079 ? 108 ? f_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.008 ? 161 ? f_plane_restr ? ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.R_factor_all _refine_ls_shell.R_factor_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.R_factor_R_work _refine_ls_shell.redundancy_reflns_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.wR_factor_all _refine_ls_shell.wR_factor_obs _refine_ls_shell.wR_factor_R_free _refine_ls_shell.wR_factor_R_work _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.pdbx_phase_error _refine_ls_shell.pdbx_fsc_work _refine_ls_shell.pdbx_fsc_free 'X-RAY DIFFRACTION' 1.550 1.6701 . . 131 2657 90.00 . . . 0.2481 . 0.1813 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.6701 1.8381 . . 124 2840 95.00 . . . 0.2186 . 0.1827 . . . . . . . . . . 'X-RAY DIFFRACTION' 1.8381 2.1040 . . 142 2964 100.00 . . . 0.1863 . 0.1571 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.1040 2.6505 . . 155 2953 100.00 . . . 0.1788 . 0.1641 . . . . . . . . . . 'X-RAY DIFFRACTION' 2.6505 26.7635 . . 162 3014 100.00 . . . 0.1831 . 0.1581 . . . . . . . . . . # _struct.entry_id 4ZCE _struct.title 'Crystal Structure of the dust mite allergen Der p 23 from Dermatophagoides pteronyssinus' _struct.pdbx_descriptor 'Dust mite allergen' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4ZCE _struct_keywords.text 'Dust, Mite, Allergen, Der p 23' _struct_keywords.pdbx_keywords ALLERGEN # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 3 ? # _struct_biol.details 'AS PER THE AUTHORS THE BIOLOGICAL ASSEMBLY IS UNKNOWN' _struct_biol.id 1 _struct_biol.pdbx_aggregation_state ? _struct_biol.pdbx_assembly_method ? _struct_biol.pdbx_formula_weight ? _struct_biol.pdbx_formula_weight_method ? _struct_biol.pdbx_parent_biol_id ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 7 SG ? ? ? 1_555 A CYS 26 SG ? ? A CYS 47 A CYS 66 1_555 ? ? ? ? ? ? ? 2.062 ? disulf2 disulf ? ? A CYS 36 SG ? ? ? 1_555 A CYS 49 SG ? ? A CYS 76 A CYS 89 1_555 ? ? ? ? ? ? ? 2.070 ? disulf3 disulf ? ? B CYS 7 SG ? ? ? 1_555 B CYS 26 SG ? ? B CYS 47 B CYS 66 1_555 ? ? ? ? ? ? ? 2.076 ? disulf4 disulf ? ? B CYS 36 SG ? ? ? 1_555 B CYS 49 SG ? ? B CYS 76 B CYS 89 1_555 ? ? ? ? ? ? ? 2.084 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA1 ? 3 ? AA2 ? 2 ? AA3 ? 3 ? AA4 ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA1 1 2 ? anti-parallel AA1 2 3 ? anti-parallel AA2 1 2 ? anti-parallel AA3 1 2 ? anti-parallel AA3 2 3 ? anti-parallel AA4 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA1 1 GLY A 12 ? ALA A 15 ? GLY A 52 ALA A 55 AA1 2 LYS A 22 ? SER A 27 ? LYS A 62 SER A 67 AA1 3 GLU A 30 ? ASP A 35 ? GLU A 70 ASP A 75 AA2 1 ARG A 41 ? ASN A 43 ? ARG A 81 ASN A 83 AA2 2 THR A 48 ? THR A 50 ? THR A 88 THR A 90 AA3 1 GLY B 12 ? ALA B 15 ? GLY B 52 ALA B 55 AA3 2 LYS B 22 ? SER B 27 ? LYS B 62 SER B 67 AA3 3 GLU B 30 ? ASP B 35 ? GLU B 70 ASP B 75 AA4 1 TRP B 42 ? ASN B 43 ? TRP B 82 ASN B 83 AA4 2 THR B 48 ? CYS B 49 ? THR B 88 CYS B 89 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA1 1 2 N GLY A 12 ? N GLY A 52 O CYS A 26 ? O CYS A 66 AA1 2 3 N PHE A 23 ? N PHE A 63 O LYS A 34 ? O LYS A 74 AA2 1 2 N ASN A 43 ? N ASN A 83 O THR A 48 ? O THR A 88 AA3 1 2 N GLY B 12 ? N GLY B 52 O CYS B 26 ? O CYS B 66 AA3 2 3 N PHE B 23 ? N PHE B 63 O LYS B 34 ? O LYS B 74 AA4 1 2 N ASN B 43 ? N ASN B 83 O THR B 48 ? O THR B 88 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id EDO _struct_site.pdbx_auth_seq_id 101 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'binding site for residue EDO A 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 LYS A 22 ? LYS A 62 . ? 1_555 ? 2 AC1 5 HIS A 33 ? HIS A 73 . ? 1_555 ? 3 AC1 5 ASP A 35 ? ASP A 75 . ? 1_555 ? 4 AC1 5 HOH D . ? HOH A 225 . ? 1_455 ? 5 AC1 5 HOH D . ? HOH A 275 . ? 1_555 ? # _atom_sites.entry_id 4ZCE _atom_sites.fract_transf_matrix[1][1] 0.039552 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.003788 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018685 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024869 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 41 ? ? ? A . n A 1 2 PHE 2 42 ? ? ? A . n A 1 3 THR 3 43 43 THR THR A . n A 1 4 LYS 4 44 44 LYS LYS A . n A 1 5 PHE 5 45 45 PHE PHE A . n A 1 6 GLU 6 46 46 GLU GLU A . n A 1 7 CYS 7 47 47 CYS CYS A . n A 1 8 PRO 8 48 48 PRO PRO A . n A 1 9 SER 9 49 49 SER SER A . n A 1 10 ARG 10 50 50 ARG ARG A . n A 1 11 PHE 11 51 51 PHE PHE A . n A 1 12 GLY 12 52 52 GLY GLY A . n A 1 13 TYR 13 53 53 TYR TYR A . n A 1 14 PHE 14 54 54 PHE PHE A . n A 1 15 ALA 15 55 55 ALA ALA A . n A 1 16 ASP 16 56 56 ASP ASP A . n A 1 17 PRO 17 57 57 PRO PRO A . n A 1 18 LYS 18 58 58 LYS LYS A . n A 1 19 ASP 19 59 59 ASP ASP A . n A 1 20 PRO 20 60 60 PRO PRO A . n A 1 21 HIS 21 61 61 HIS HIS A . n A 1 22 LYS 22 62 62 LYS LYS A . n A 1 23 PHE 23 63 63 PHE PHE A . n A 1 24 TYR 24 64 64 TYR TYR A . n A 1 25 ILE 25 65 65 ILE ILE A . n A 1 26 CYS 26 66 66 CYS CYS A . n A 1 27 SER 27 67 67 SER SER A . n A 1 28 ASN 28 68 68 ASN ASN A . n A 1 29 TRP 29 69 69 TRP TRP A . n A 1 30 GLU 30 70 70 GLU GLU A . n A 1 31 ALA 31 71 71 ALA ALA A . n A 1 32 VAL 32 72 72 VAL VAL A . n A 1 33 HIS 33 73 73 HIS HIS A . n A 1 34 LYS 34 74 74 LYS LYS A . n A 1 35 ASP 35 75 75 ASP ASP A . n A 1 36 CYS 36 76 76 CYS CYS A . n A 1 37 PRO 37 77 77 PRO PRO A . n A 1 38 GLY 38 78 78 GLY GLY A . n A 1 39 ASN 39 79 79 ASN ASN A . n A 1 40 THR 40 80 80 THR THR A . n A 1 41 ARG 41 81 81 ARG ARG A . n A 1 42 TRP 42 82 82 TRP TRP A . n A 1 43 ASN 43 83 83 ASN ASN A . n A 1 44 GLU 44 84 84 GLU GLU A . n A 1 45 ASP 45 85 85 ASP ASP A . n A 1 46 GLU 46 86 86 GLU GLU A . n A 1 47 GLU 47 87 87 GLU GLU A . n A 1 48 THR 48 88 88 THR THR A . n A 1 49 CYS 49 89 89 CYS CYS A . n A 1 50 THR 50 90 90 THR THR A . n B 1 1 SER 1 41 ? ? ? B . n B 1 2 PHE 2 42 ? ? ? B . n B 1 3 THR 3 43 43 THR THR B . n B 1 4 LYS 4 44 44 LYS LYS B . n B 1 5 PHE 5 45 45 PHE PHE B . n B 1 6 GLU 6 46 46 GLU GLU B . n B 1 7 CYS 7 47 47 CYS CYS B . n B 1 8 PRO 8 48 48 PRO PRO B . n B 1 9 SER 9 49 49 SER SER B . n B 1 10 ARG 10 50 50 ARG ARG B . n B 1 11 PHE 11 51 51 PHE PHE B . n B 1 12 GLY 12 52 52 GLY GLY B . n B 1 13 TYR 13 53 53 TYR TYR B . n B 1 14 PHE 14 54 54 PHE PHE B . n B 1 15 ALA 15 55 55 ALA ALA B . n B 1 16 ASP 16 56 56 ASP ASP B . n B 1 17 PRO 17 57 57 PRO PRO B . n B 1 18 LYS 18 58 58 LYS LYS B . n B 1 19 ASP 19 59 59 ASP ASP B . n B 1 20 PRO 20 60 60 PRO PRO B . n B 1 21 HIS 21 61 61 HIS HIS B . n B 1 22 LYS 22 62 62 LYS LYS B . n B 1 23 PHE 23 63 63 PHE PHE B . n B 1 24 TYR 24 64 64 TYR TYR B . n B 1 25 ILE 25 65 65 ILE ILE B . n B 1 26 CYS 26 66 66 CYS CYS B . n B 1 27 SER 27 67 67 SER SER B . n B 1 28 ASN 28 68 68 ASN ASN B . n B 1 29 TRP 29 69 69 TRP TRP B . n B 1 30 GLU 30 70 70 GLU GLU B . n B 1 31 ALA 31 71 71 ALA ALA B . n B 1 32 VAL 32 72 72 VAL VAL B . n B 1 33 HIS 33 73 73 HIS HIS B . n B 1 34 LYS 34 74 74 LYS LYS B . n B 1 35 ASP 35 75 75 ASP ASP B . n B 1 36 CYS 36 76 76 CYS CYS B . n B 1 37 PRO 37 77 77 PRO PRO B . n B 1 38 GLY 38 78 78 GLY GLY B . n B 1 39 ASN 39 79 79 ASN ASN B . n B 1 40 THR 40 80 80 THR THR B . n B 1 41 ARG 41 81 81 ARG ARG B . n B 1 42 TRP 42 82 82 TRP TRP B . n B 1 43 ASN 43 83 83 ASN ASN B . n B 1 44 GLU 44 84 84 GLU GLU B . n B 1 45 ASP 45 85 85 ASP ASP B . n B 1 46 GLU 46 86 86 GLU GLU B . n B 1 47 GLU 47 87 87 GLU GLU B . n B 1 48 THR 48 88 88 THR THR B . n B 1 49 CYS 49 89 89 CYS CYS B . n B 1 50 THR 50 90 90 THR THR B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 EDO 1 101 1 EDO EDO A . D 3 HOH 1 201 58 HOH HOH A . D 3 HOH 2 202 139 HOH HOH A . D 3 HOH 3 203 163 HOH HOH A . D 3 HOH 4 204 44 HOH HOH A . D 3 HOH 5 205 68 HOH HOH A . D 3 HOH 6 206 174 HOH HOH A . D 3 HOH 7 207 197 HOH HOH A . D 3 HOH 8 208 70 HOH HOH A . D 3 HOH 9 209 27 HOH HOH A . D 3 HOH 10 210 103 HOH HOH A . D 3 HOH 11 211 157 HOH HOH A . D 3 HOH 12 212 133 HOH HOH A . D 3 HOH 13 213 123 HOH HOH A . D 3 HOH 14 214 148 HOH HOH A . D 3 HOH 15 215 186 HOH HOH A . D 3 HOH 16 216 63 HOH HOH A . D 3 HOH 17 217 3 HOH HOH A . D 3 HOH 18 218 64 HOH HOH A . D 3 HOH 19 219 55 HOH HOH A . D 3 HOH 20 220 47 HOH HOH A . D 3 HOH 21 221 137 HOH HOH A . D 3 HOH 22 222 2 HOH HOH A . D 3 HOH 23 223 117 HOH HOH A . D 3 HOH 24 224 28 HOH HOH A . D 3 HOH 25 225 105 HOH HOH A . D 3 HOH 26 226 201 HOH HOH A . D 3 HOH 27 227 8 HOH HOH A . D 3 HOH 28 228 4 HOH HOH A . D 3 HOH 29 229 39 HOH HOH A . D 3 HOH 30 230 21 HOH HOH A . D 3 HOH 31 231 141 HOH HOH A . D 3 HOH 32 232 65 HOH HOH A . D 3 HOH 33 233 76 HOH HOH A . D 3 HOH 34 234 24 HOH HOH A . D 3 HOH 35 235 75 HOH HOH A . D 3 HOH 36 236 86 HOH HOH A . D 3 HOH 37 237 78 HOH HOH A . D 3 HOH 38 238 156 HOH HOH A . D 3 HOH 39 239 42 HOH HOH A . D 3 HOH 40 240 45 HOH HOH A . D 3 HOH 41 241 190 HOH HOH A . D 3 HOH 42 242 185 HOH HOH A . D 3 HOH 43 243 198 HOH HOH A . D 3 HOH 44 244 179 HOH HOH A . D 3 HOH 45 245 38 HOH HOH A . D 3 HOH 46 246 195 HOH HOH A . D 3 HOH 47 247 85 HOH HOH A . D 3 HOH 48 248 194 HOH HOH A . D 3 HOH 49 249 11 HOH HOH A . D 3 HOH 50 250 183 HOH HOH A . D 3 HOH 51 251 34 HOH HOH A . D 3 HOH 52 252 184 HOH HOH A . D 3 HOH 53 253 40 HOH HOH A . D 3 HOH 54 254 7 HOH HOH A . D 3 HOH 55 255 51 HOH HOH A . D 3 HOH 56 256 89 HOH HOH A . D 3 HOH 57 257 125 HOH HOH A . D 3 HOH 58 258 6 HOH HOH A . D 3 HOH 59 259 57 HOH HOH A . D 3 HOH 60 260 48 HOH HOH A . D 3 HOH 61 261 49 HOH HOH A . D 3 HOH 62 262 181 HOH HOH A . D 3 HOH 63 263 165 HOH HOH A . D 3 HOH 64 264 199 HOH HOH A . D 3 HOH 65 265 97 HOH HOH A . D 3 HOH 66 266 104 HOH HOH A . D 3 HOH 67 267 154 HOH HOH A . D 3 HOH 68 268 200 HOH HOH A . D 3 HOH 69 269 182 HOH HOH A . D 3 HOH 70 270 147 HOH HOH A . D 3 HOH 71 271 84 HOH HOH A . D 3 HOH 72 272 83 HOH HOH A . D 3 HOH 73 273 98 HOH HOH A . D 3 HOH 74 274 149 HOH HOH A . D 3 HOH 75 275 115 HOH HOH A . D 3 HOH 76 276 122 HOH HOH A . D 3 HOH 77 277 50 HOH HOH A . D 3 HOH 78 278 192 HOH HOH A . D 3 HOH 79 279 155 HOH HOH A . D 3 HOH 80 280 152 HOH HOH A . D 3 HOH 81 281 16 HOH HOH A . D 3 HOH 82 282 74 HOH HOH A . D 3 HOH 83 283 161 HOH HOH A . D 3 HOH 84 284 145 HOH HOH A . D 3 HOH 85 285 164 HOH HOH A . D 3 HOH 86 286 143 HOH HOH A . D 3 HOH 87 287 134 HOH HOH A . D 3 HOH 88 288 188 HOH HOH A . D 3 HOH 89 289 162 HOH HOH A . D 3 HOH 90 290 126 HOH HOH A . D 3 HOH 91 291 144 HOH HOH A . D 3 HOH 92 292 61 HOH HOH A . D 3 HOH 93 293 169 HOH HOH A . D 3 HOH 94 294 177 HOH HOH A . D 3 HOH 95 295 135 HOH HOH A . D 3 HOH 96 296 176 HOH HOH A . E 3 HOH 1 101 150 HOH HOH B . E 3 HOH 2 102 193 HOH HOH B . E 3 HOH 3 103 114 HOH HOH B . E 3 HOH 4 104 102 HOH HOH B . E 3 HOH 5 105 167 HOH HOH B . E 3 HOH 6 106 10 HOH HOH B . E 3 HOH 7 107 189 HOH HOH B . E 3 HOH 8 108 127 HOH HOH B . E 3 HOH 9 109 99 HOH HOH B . E 3 HOH 10 110 87 HOH HOH B . E 3 HOH 11 111 80 HOH HOH B . E 3 HOH 12 112 5 HOH HOH B . E 3 HOH 13 113 25 HOH HOH B . E 3 HOH 14 114 69 HOH HOH B . E 3 HOH 15 115 26 HOH HOH B . E 3 HOH 16 116 116 HOH HOH B . E 3 HOH 17 117 52 HOH HOH B . E 3 HOH 18 118 113 HOH HOH B . E 3 HOH 19 119 172 HOH HOH B . E 3 HOH 20 120 60 HOH HOH B . E 3 HOH 21 121 101 HOH HOH B . E 3 HOH 22 122 12 HOH HOH B . E 3 HOH 23 123 107 HOH HOH B . E 3 HOH 24 124 160 HOH HOH B . E 3 HOH 25 125 37 HOH HOH B . E 3 HOH 26 126 13 HOH HOH B . E 3 HOH 27 127 111 HOH HOH B . E 3 HOH 28 128 79 HOH HOH B . E 3 HOH 29 129 72 HOH HOH B . E 3 HOH 30 130 93 HOH HOH B . E 3 HOH 31 131 180 HOH HOH B . E 3 HOH 32 132 92 HOH HOH B . E 3 HOH 33 133 19 HOH HOH B . E 3 HOH 34 134 18 HOH HOH B . E 3 HOH 35 135 31 HOH HOH B . E 3 HOH 36 136 158 HOH HOH B . E 3 HOH 37 137 23 HOH HOH B . E 3 HOH 38 138 17 HOH HOH B . E 3 HOH 39 139 128 HOH HOH B . E 3 HOH 40 140 168 HOH HOH B . E 3 HOH 41 141 32 HOH HOH B . E 3 HOH 42 142 73 HOH HOH B . E 3 HOH 43 143 1 HOH HOH B . E 3 HOH 44 144 29 HOH HOH B . E 3 HOH 45 145 67 HOH HOH B . E 3 HOH 46 146 22 HOH HOH B . E 3 HOH 47 147 130 HOH HOH B . E 3 HOH 48 148 53 HOH HOH B . E 3 HOH 49 149 43 HOH HOH B . E 3 HOH 50 150 100 HOH HOH B . E 3 HOH 51 151 82 HOH HOH B . E 3 HOH 52 152 14 HOH HOH B . E 3 HOH 53 153 77 HOH HOH B . E 3 HOH 54 154 30 HOH HOH B . E 3 HOH 55 155 96 HOH HOH B . E 3 HOH 56 156 20 HOH HOH B . E 3 HOH 57 157 9 HOH HOH B . E 3 HOH 58 158 46 HOH HOH B . E 3 HOH 59 159 33 HOH HOH B . E 3 HOH 60 160 153 HOH HOH B . E 3 HOH 61 161 54 HOH HOH B . E 3 HOH 62 162 35 HOH HOH B . E 3 HOH 63 163 187 HOH HOH B . E 3 HOH 64 164 36 HOH HOH B . E 3 HOH 65 165 131 HOH HOH B . E 3 HOH 66 166 175 HOH HOH B . E 3 HOH 67 167 120 HOH HOH B . E 3 HOH 68 168 88 HOH HOH B . E 3 HOH 69 169 41 HOH HOH B . E 3 HOH 70 170 178 HOH HOH B . E 3 HOH 71 171 106 HOH HOH B . E 3 HOH 72 172 138 HOH HOH B . E 3 HOH 73 173 146 HOH HOH B . E 3 HOH 74 174 112 HOH HOH B . E 3 HOH 75 175 170 HOH HOH B . E 3 HOH 76 176 109 HOH HOH B . E 3 HOH 77 177 66 HOH HOH B . E 3 HOH 78 178 140 HOH HOH B . E 3 HOH 79 179 91 HOH HOH B . E 3 HOH 80 180 136 HOH HOH B . E 3 HOH 81 181 151 HOH HOH B . E 3 HOH 82 182 71 HOH HOH B . E 3 HOH 83 183 56 HOH HOH B . E 3 HOH 84 184 81 HOH HOH B . E 3 HOH 85 185 196 HOH HOH B . E 3 HOH 86 186 166 HOH HOH B . E 3 HOH 87 187 95 HOH HOH B . E 3 HOH 88 188 94 HOH HOH B . E 3 HOH 89 189 62 HOH HOH B . E 3 HOH 90 190 159 HOH HOH B . E 3 HOH 91 191 121 HOH HOH B . E 3 HOH 92 192 15 HOH HOH B . E 3 HOH 93 193 108 HOH HOH B . E 3 HOH 94 194 129 HOH HOH B . E 3 HOH 95 195 119 HOH HOH B . E 3 HOH 96 196 173 HOH HOH B . E 3 HOH 97 197 171 HOH HOH B . E 3 HOH 98 198 90 HOH HOH B . E 3 HOH 99 199 132 HOH HOH B . E 3 HOH 100 200 110 HOH HOH B . E 3 HOH 101 201 59 HOH HOH B . E 3 HOH 102 202 142 HOH HOH B . E 3 HOH 103 203 124 HOH HOH B . E 3 HOH 104 204 118 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1010 ? 1 MORE -2 ? 1 'SSA (A^2)' 6550 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2015-11-25 2 'Structure model' 1 1 2015-12-09 3 'Structure model' 1 2 2016-02-10 4 'Structure model' 1 3 2017-09-20 5 'Structure model' 1 4 2019-12-11 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Author supporting evidence' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Author supporting evidence' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' pdbx_audit_support 2 4 'Structure model' pdbx_struct_oper_list 3 5 'Structure model' pdbx_audit_support # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_pdbx_audit_support.funding_organization' 2 4 'Structure model' '_pdbx_struct_oper_list.symmetry_operation' 3 5 'Structure model' '_pdbx_audit_support.funding_organization' # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? refinement ? ? ? ? ? ? ? ? ? ? ? PHENIX ? ? ? 1.8.2_1309 1 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 3 ? phasing ? ? ? ? ? ? ? ? ? ? ? HKL-3000 ? ? ? . 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 213 ? ? O A HOH 289 ? ? 1.88 2 1 O B HOH 175 ? ? O B HOH 197 ? ? 1.94 3 1 O B HOH 170 ? ? O B HOH 196 ? ? 2.03 4 1 O A HOH 231 ? ? O B HOH 118 ? ? 2.10 5 1 O A HOH 207 ? ? O A HOH 250 ? ? 2.11 6 1 O A HOH 207 ? ? O A HOH 252 ? ? 2.13 7 1 OD1 B ASP 85 ? ? O B HOH 101 ? ? 2.15 8 1 OE2 A GLU 87 ? ? O A HOH 201 ? ? 2.15 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id ASP _pdbx_validate_torsion.auth_asym_id B _pdbx_validate_torsion.auth_seq_id 59 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -161.57 _pdbx_validate_torsion.psi 112.73 # _pdbx_distant_solvent_atoms.id 1 _pdbx_distant_solvent_atoms.PDB_model_num 1 _pdbx_distant_solvent_atoms.auth_atom_id O _pdbx_distant_solvent_atoms.label_alt_id ? _pdbx_distant_solvent_atoms.auth_asym_id A _pdbx_distant_solvent_atoms.auth_comp_id HOH _pdbx_distant_solvent_atoms.auth_seq_id 296 _pdbx_distant_solvent_atoms.PDB_ins_code ? _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance 6.11 _pdbx_distant_solvent_atoms.neighbor_ligand_distance . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A LYS 44 ? CD ? A LYS 4 CD 2 1 Y 1 A LYS 44 ? CE ? A LYS 4 CE 3 1 Y 1 A LYS 44 ? NZ ? A LYS 4 NZ 4 1 Y 1 A LYS 58 ? CE ? A LYS 18 CE 5 1 Y 1 A LYS 58 ? NZ ? A LYS 18 NZ 6 1 Y 1 A GLU 70 ? CG ? A GLU 30 CG 7 1 Y 1 A GLU 70 ? CD ? A GLU 30 CD 8 1 Y 1 A GLU 70 ? OE1 ? A GLU 30 OE1 9 1 Y 1 A GLU 70 ? OE2 ? A GLU 30 OE2 10 1 Y 1 B LYS 44 ? CE ? B LYS 4 CE 11 1 Y 1 B LYS 44 ? NZ ? B LYS 4 NZ 12 1 Y 1 B LYS 58 ? CE ? B LYS 18 CE 13 1 Y 1 B LYS 58 ? NZ ? B LYS 18 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 41 ? A SER 1 2 1 Y 1 A PHE 42 ? A PHE 2 3 1 Y 1 B SER 41 ? B SER 1 4 1 Y 1 B PHE 42 ? B PHE 2 # _pdbx_audit_support.funding_organization 'National Institutes of Health/National Institute Of Allergy and Infectious Diseases (NIH/NIAID)' _pdbx_audit_support.country 'United States' _pdbx_audit_support.grant_number 'Z01-ES102885, ZIA-ES102645,R01AI077653' _pdbx_audit_support.ordinal 1 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 water HOH #