HEADER HYDROLASE 27-APR-15 4ZI2 TITLE BART-LIKE DOMAIN OF BARTL1/CCDC104 IN COMPLEX WITH ARL3FL BOUND TO TITLE 2 GPPNHP IN P21 21 21 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 3; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES; COMPND 5 MOL_ID: 2; COMPND 6 MOLECULE: CILIA- AND FLAGELLA-ASSOCIATED PROTEIN 36; COMPND 7 CHAIN: C, D; COMPND 8 FRAGMENT: UNP RESIDUES 1-133; COMPND 9 SYNONYM: COILED-COIL DOMAIN-CONTAINING PROTEIN 104, CCDC104/BARTL1; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: ARL3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VARIANT: RIL; SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET20; SOURCE 12 MOL_ID: 2; SOURCE 13 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 14 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 15 ORGANISM_TAXID: 10090; SOURCE 16 GENE: CFAP36, CCDC104; SOURCE 17 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 18 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 19 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 20 EXPRESSION_SYSTEM_VARIANT: RIL; SOURCE 21 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 22 EXPRESSION_SYSTEM_PLASMID: PGEX4T1 GATEWAY KEYWDS COMPLEX, ARF-LIKE GTPASE, GTP-BINDING, BART-LIKE DOMAIN, CILIA, KEYWDS 2 HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR M.LOKAJ,C.KOERNER,S.KOESLING,A.WITTINGHOFER REVDAT 4 10-JAN-24 4ZI2 1 LINK REVDAT 3 09-OCT-19 4ZI2 1 COMPND SOURCE REMARK DBREF REVDAT 3 2 1 SEQADV SEQRES HELIX ATOM REVDAT 2 18-NOV-15 4ZI2 1 JRNL REVDAT 1 11-NOV-15 4ZI2 0 JRNL AUTH M.LOKAJ,S.K.KOSLING,C.KOERNER,S.M.LANGE,S.E.VAN BEERSUM, JRNL AUTH 2 J.VAN REEUWIJK,R.ROEPMAN,N.HORN,M.UEFFING,K.BOLDT, JRNL AUTH 3 A.WITTINGHOFER JRNL TITL THE INTERACTION OF CCDC104/BARTL1 WITH ARL3 AND IMPLICATIONS JRNL TITL 2 FOR CILIARY FUNCTION. JRNL REF STRUCTURE V. 23 2122 2015 JRNL REFN ISSN 0969-2126 JRNL PMID 26455799 JRNL DOI 10.1016/J.STR.2015.08.016 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.360 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 36470 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.209 REMARK 3 R VALUE (WORKING SET) : 0.206 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 1826 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.7301 - 5.1646 1.00 2832 150 0.2199 0.2337 REMARK 3 2 5.1646 - 4.1027 1.00 2717 143 0.1883 0.2954 REMARK 3 3 4.1027 - 3.5851 1.00 2701 142 0.1858 0.2274 REMARK 3 4 3.5851 - 3.2578 1.00 2670 141 0.1874 0.2663 REMARK 3 5 3.2578 - 3.0245 1.00 2646 139 0.2132 0.2694 REMARK 3 6 3.0245 - 2.8463 1.00 2653 140 0.2151 0.2684 REMARK 3 7 2.8463 - 2.7039 1.00 2650 140 0.2221 0.2976 REMARK 3 8 2.7039 - 2.5863 1.00 2623 138 0.2247 0.2872 REMARK 3 9 2.5863 - 2.4868 1.00 2653 139 0.2137 0.2906 REMARK 3 10 2.4868 - 2.4010 1.00 2609 138 0.2124 0.2660 REMARK 3 11 2.4010 - 2.3259 1.00 2637 139 0.2144 0.2411 REMARK 3 12 2.3259 - 2.2595 1.00 2633 139 0.2143 0.2926 REMARK 3 13 2.2595 - 2.2000 1.00 2620 138 0.2356 0.3439 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.410 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 5147 REMARK 3 ANGLE : 1.098 6980 REMARK 3 CHIRALITY : 0.042 790 REMARK 3 PLANARITY : 0.005 891 REMARK 3 DIHEDRAL : 17.128 1950 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZI2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 27-APR-15. REMARK 100 THE DEPOSITION ID IS D_1000209089. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-SEP-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36470 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 29.730 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.550 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.8700 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.80 REMARK 200 R MERGE FOR SHELL (I) : 0.54000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.660 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3DOE REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.17 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.37 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1 M LICL, 0.1 M MES PH 6.0, 30% PEG REMARK 280 6000, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 34.85000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 51.21500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.30000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 51.21500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 34.85000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.30000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3250 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3200 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -31.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 HIS A 188 REMARK 465 HIS A 189 REMARK 465 HIS A 190 REMARK 465 MET B 1 REMARK 465 GLY B 2 REMARK 465 ASP B 15 REMARK 465 ASN B 178 REMARK 465 ALA B 179 REMARK 465 LYS B 180 REMARK 465 LYS B 181 REMARK 465 LYS B 182 REMARK 465 LEU B 183 REMARK 465 GLU B 184 REMARK 465 HIS B 185 REMARK 465 HIS B 186 REMARK 465 HIS B 187 REMARK 465 HIS B 188 REMARK 465 HIS B 189 REMARK 465 HIS B 190 REMARK 465 GLY C -1 REMARK 465 PRO C 0 REMARK 465 MET C 1 REMARK 465 GLY C 133 REMARK 465 GLY D -1 REMARK 465 PRO D 0 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 ALA D 3 REMARK 465 GLU D 4 REMARK 465 GLU D 5 REMARK 465 ARG D 131 REMARK 465 ASN D 132 REMARK 465 GLY D 133 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 15 CG OD1 OD2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 499 O HOH A 512 1.85 REMARK 500 O HOH C 239 O HOH C 291 1.93 REMARK 500 O HOH B 412 O HOH B 432 1.95 REMARK 500 O GLU B 114 OG SER B 117 1.96 REMARK 500 O HOH B 456 O HOH B 458 1.98 REMARK 500 O HOH B 455 O HOH C 304 2.04 REMARK 500 O HOH A 503 O HOH C 257 2.06 REMARK 500 O HOH B 413 O HOH B 452 2.06 REMARK 500 NH2 ARG C 21 O HOH C 201 2.06 REMARK 500 O HOH A 480 O HOH A 493 2.07 REMARK 500 OE1 GLN B 105 O HOH B 401 2.08 REMARK 500 O HOH C 282 O HOH C 296 2.09 REMARK 500 O HOH D 283 O HOH D 287 2.10 REMARK 500 O HOH C 262 O HOH C 301 2.13 REMARK 500 OE1 GLN B 105 O HOH B 402 2.14 REMARK 500 OG1 THR B 132 O HOH B 403 2.14 REMARK 500 OE1 GLU A 113 O HOH A 401 2.14 REMARK 500 O HOH D 285 O HOH D 286 2.15 REMARK 500 OD2 ASP A 168 O HOH A 402 2.16 REMARK 500 O HOH A 498 O HOH C 305 2.17 REMARK 500 O ILE A 42 O HOH A 403 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 3 CA - CB - CG ANGL. DEV. = 14.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 118 -5.63 71.33 REMARK 500 ARG C 131 5.96 -64.46 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 527 DISTANCE = 6.02 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 31 OG1 REMARK 620 2 THR A 48 OG1 84.4 REMARK 620 3 GNP A 301 O3G 175.1 90.8 REMARK 620 4 GNP A 301 O2B 89.5 173.9 95.4 REMARK 620 5 HOH A 432 O 85.7 93.7 95.5 85.5 REMARK 620 6 HOH A 436 O 93.6 87.7 85.3 93.0 178.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 302 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 31 OG1 REMARK 620 2 THR B 48 OG1 87.0 REMARK 620 3 GNP B 301 O3G 171.7 86.2 REMARK 620 4 GNP B 301 O1B 92.6 173.0 93.6 REMARK 620 5 HOH B 417 O 92.4 100.9 93.6 86.1 REMARK 620 6 HOH B 428 O 92.5 84.9 82.1 88.1 172.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GNP B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 302 DBREF 4ZI2 A 1 182 UNP Q9WUL7 ARL3_MOUSE 1 182 DBREF 4ZI2 B 1 182 UNP Q9WUL7 ARL3_MOUSE 1 182 DBREF 4ZI2 C 1 133 UNP Q8C6E0 CFA36_MOUSE 1 133 DBREF 4ZI2 D 1 133 UNP Q8C6E0 CFA36_MOUSE 1 133 SEQADV 4ZI2 LEU A 183 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI2 GLU A 184 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI2 HIS A 185 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI2 HIS A 186 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI2 HIS A 187 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI2 HIS A 188 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI2 HIS A 189 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI2 HIS A 190 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI2 LEU B 183 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI2 GLU B 184 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI2 HIS B 185 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI2 HIS B 186 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI2 HIS B 187 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI2 HIS B 188 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI2 HIS B 189 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI2 HIS B 190 UNP Q9WUL7 EXPRESSION TAG SEQADV 4ZI2 GLY C -1 UNP Q8C6E0 EXPRESSION TAG SEQADV 4ZI2 PRO C 0 UNP Q8C6E0 EXPRESSION TAG SEQADV 4ZI2 GLY D -1 UNP Q8C6E0 EXPRESSION TAG SEQADV 4ZI2 PRO D 0 UNP Q8C6E0 EXPRESSION TAG SEQRES 1 A 190 MET GLY LEU LEU SER ILE LEU ARG LYS LEU LYS SER ALA SEQRES 2 A 190 PRO ASP GLN GLU VAL ARG ILE LEU LEU LEU GLY LEU ASP SEQRES 3 A 190 ASN ALA GLY LYS THR THR LEU LEU LYS GLN LEU ALA SER SEQRES 4 A 190 GLU ASP ILE SER HIS ILE THR PRO THR GLN GLY PHE ASN SEQRES 5 A 190 ILE LYS SER VAL GLN SER GLN GLY PHE LYS LEU ASN VAL SEQRES 6 A 190 TRP ASP ILE GLY GLY GLN ARG LYS ILE ARG PRO TYR TRP SEQRES 7 A 190 ARG SER TYR PHE GLU ASN THR ASP ILE LEU ILE TYR VAL SEQRES 8 A 190 ILE ASP SER ALA ASP ARG LYS ARG PHE GLU GLU THR GLY SEQRES 9 A 190 GLN GLU LEU THR GLU LEU LEU GLU GLU GLU LYS LEU SER SEQRES 10 A 190 CYS VAL PRO VAL LEU ILE PHE ALA ASN LYS GLN ASP LEU SEQRES 11 A 190 LEU THR ALA ALA PRO ALA SER GLU ILE ALA GLU GLY LEU SEQRES 12 A 190 ASN LEU HIS THR ILE ARG ASP ARG VAL TRP GLN ILE GLN SEQRES 13 A 190 SER CYS SER ALA LEU THR GLY GLU GLY VAL GLN ASP GLY SEQRES 14 A 190 MET ASN TRP VAL CYS LYS ASN VAL ASN ALA LYS LYS LYS SEQRES 15 A 190 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 190 MET GLY LEU LEU SER ILE LEU ARG LYS LEU LYS SER ALA SEQRES 2 B 190 PRO ASP GLN GLU VAL ARG ILE LEU LEU LEU GLY LEU ASP SEQRES 3 B 190 ASN ALA GLY LYS THR THR LEU LEU LYS GLN LEU ALA SER SEQRES 4 B 190 GLU ASP ILE SER HIS ILE THR PRO THR GLN GLY PHE ASN SEQRES 5 B 190 ILE LYS SER VAL GLN SER GLN GLY PHE LYS LEU ASN VAL SEQRES 6 B 190 TRP ASP ILE GLY GLY GLN ARG LYS ILE ARG PRO TYR TRP SEQRES 7 B 190 ARG SER TYR PHE GLU ASN THR ASP ILE LEU ILE TYR VAL SEQRES 8 B 190 ILE ASP SER ALA ASP ARG LYS ARG PHE GLU GLU THR GLY SEQRES 9 B 190 GLN GLU LEU THR GLU LEU LEU GLU GLU GLU LYS LEU SER SEQRES 10 B 190 CYS VAL PRO VAL LEU ILE PHE ALA ASN LYS GLN ASP LEU SEQRES 11 B 190 LEU THR ALA ALA PRO ALA SER GLU ILE ALA GLU GLY LEU SEQRES 12 B 190 ASN LEU HIS THR ILE ARG ASP ARG VAL TRP GLN ILE GLN SEQRES 13 B 190 SER CYS SER ALA LEU THR GLY GLU GLY VAL GLN ASP GLY SEQRES 14 B 190 MET ASN TRP VAL CYS LYS ASN VAL ASN ALA LYS LYS LYS SEQRES 15 B 190 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 135 GLY PRO MET ALA ALA GLU GLU GLU ASP GLU VAL GLU TRP SEQRES 2 C 135 VAL VAL GLU SER ILE ALA GLY PHE LEU ARG GLY PRO ASP SEQRES 3 C 135 TRP SER ILE PRO ILE LEU ASP PHE VAL GLU GLN LYS CYS SEQRES 4 C 135 GLU VAL PHE ASP ASP GLU GLU GLU SER LYS LEU THR TYR SEQRES 5 C 135 THR GLU ILE HIS GLN GLU TYR LYS GLU LEU VAL GLU LYS SEQRES 6 C 135 LEU LEU GLU SER TYR LEU LYS GLU ILE GLY ILE ASN GLU SEQRES 7 C 135 ASP GLN PHE GLN GLU ALA CYS THR SER PRO LEU ALA LYS SEQRES 8 C 135 THR ARG THR SER GLN ALA ILE LEU GLN PRO VAL LEU ALA SEQRES 9 C 135 ALA GLU ASP PHE THR ILE PHE LYS ALA MET MET VAL GLN SEQRES 10 C 135 LYS ASN ILE GLU MET GLN LEU GLN ALA ILE ARG ILE ILE SEQRES 11 C 135 GLN GLU ARG ASN GLY SEQRES 1 D 135 GLY PRO MET ALA ALA GLU GLU GLU ASP GLU VAL GLU TRP SEQRES 2 D 135 VAL VAL GLU SER ILE ALA GLY PHE LEU ARG GLY PRO ASP SEQRES 3 D 135 TRP SER ILE PRO ILE LEU ASP PHE VAL GLU GLN LYS CYS SEQRES 4 D 135 GLU VAL PHE ASP ASP GLU GLU GLU SER LYS LEU THR TYR SEQRES 5 D 135 THR GLU ILE HIS GLN GLU TYR LYS GLU LEU VAL GLU LYS SEQRES 6 D 135 LEU LEU GLU SER TYR LEU LYS GLU ILE GLY ILE ASN GLU SEQRES 7 D 135 ASP GLN PHE GLN GLU ALA CYS THR SER PRO LEU ALA LYS SEQRES 8 D 135 THR ARG THR SER GLN ALA ILE LEU GLN PRO VAL LEU ALA SEQRES 9 D 135 ALA GLU ASP PHE THR ILE PHE LYS ALA MET MET VAL GLN SEQRES 10 D 135 LYS ASN ILE GLU MET GLN LEU GLN ALA ILE ARG ILE ILE SEQRES 11 D 135 GLN GLU ARG ASN GLY HET GNP A 301 32 HET MG A 302 1 HET GNP B 301 32 HET MG B 302 1 HETNAM GNP PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER HETNAM MG MAGNESIUM ION FORMUL 5 GNP 2(C10 H17 N6 O13 P3) FORMUL 6 MG 2(MG 2+) FORMUL 9 HOH *383(H2 O) HELIX 1 AA1 SER A 5 LYS A 11 5 7 HELIX 2 AA2 ALA A 13 ASP A 15 5 3 HELIX 3 AA3 GLY A 29 ALA A 38 1 10 HELIX 4 AA4 ILE A 74 PHE A 82 5 9 HELIX 5 AA5 ASP A 96 LYS A 98 5 3 HELIX 6 AA6 ARG A 99 LEU A 111 1 13 HELIX 7 AA7 GLU A 112 SER A 117 5 6 HELIX 8 AA8 PRO A 135 LEU A 143 1 9 HELIX 9 AA9 ASN A 144 ILE A 148 5 5 HELIX 10 AB1 GLY A 165 ASN A 176 1 12 HELIX 11 AB2 ASN A 178 HIS A 187 1 10 HELIX 12 AB3 LEU B 4 LYS B 11 5 8 HELIX 13 AB4 GLY B 29 ALA B 38 1 10 HELIX 14 AB5 ILE B 74 PHE B 82 5 9 HELIX 15 AB6 ASP B 96 LYS B 98 5 3 HELIX 16 AB7 ARG B 99 GLU B 113 1 15 HELIX 17 AB8 GLU B 114 SER B 117 5 4 HELIX 18 AB9 PRO B 135 ASN B 144 1 10 HELIX 19 AC1 LEU B 145 ILE B 148 5 4 HELIX 20 AC2 GLY B 165 ASN B 176 1 12 HELIX 21 AC3 ALA C 3 GLY C 22 1 20 HELIX 22 AC4 GLY C 22 CYS C 37 1 16 HELIX 23 AC5 GLU C 38 PHE C 40 5 3 HELIX 24 AC6 LYS C 47 GLY C 73 1 27 HELIX 25 AC7 ASN C 75 SER C 85 1 11 HELIX 26 AC8 PRO C 86 ARG C 91 1 6 HELIX 27 AC9 SER C 93 ASP C 105 1 13 HELIX 28 AD1 ASP C 105 ARG C 131 1 27 HELIX 29 AD2 ASP D 7 GLY D 22 1 16 HELIX 30 AD3 GLY D 22 CYS D 37 1 16 HELIX 31 AD4 GLU D 38 PHE D 40 5 3 HELIX 32 AD5 LYS D 47 GLY D 73 1 27 HELIX 33 AD6 ASN D 75 SER D 85 1 11 HELIX 34 AD7 PRO D 86 ARG D 91 1 6 HELIX 35 AD8 SER D 93 ASP D 105 1 13 HELIX 36 AD9 ASP D 105 GLN D 129 1 25 SHEET 1 AA1 6 PHE A 51 SER A 58 0 SHEET 2 AA1 6 PHE A 61 ILE A 68 -1 O LEU A 63 N VAL A 56 SHEET 3 AA1 6 GLU A 17 GLY A 24 1 N ILE A 20 O ASN A 64 SHEET 4 AA1 6 ILE A 87 ASP A 93 1 O ILE A 89 N LEU A 21 SHEET 5 AA1 6 VAL A 121 ASN A 126 1 O LEU A 122 N TYR A 90 SHEET 6 AA1 6 TRP A 153 SER A 157 1 O GLN A 154 N ILE A 123 SHEET 1 AA2 6 PHE B 51 GLN B 57 0 SHEET 2 AA2 6 LYS B 62 ILE B 68 -1 O ASP B 67 N ASN B 52 SHEET 3 AA2 6 GLU B 17 GLY B 24 1 N VAL B 18 O ASN B 64 SHEET 4 AA2 6 ILE B 87 ASP B 93 1 O VAL B 91 N LEU B 23 SHEET 5 AA2 6 VAL B 121 ASN B 126 1 O LEU B 122 N LEU B 88 SHEET 6 AA2 6 TRP B 153 SER B 157 1 O GLN B 154 N ILE B 123 LINK OG1 THR A 31 MG MG A 302 1555 1555 2.11 LINK OG1 THR A 48 MG MG A 302 1555 1555 2.07 LINK O3G GNP A 301 MG MG A 302 1555 1555 1.98 LINK O2B GNP A 301 MG MG A 302 1555 1555 2.12 LINK MG MG A 302 O HOH A 432 1555 1555 1.96 LINK MG MG A 302 O HOH A 436 1555 1555 2.05 LINK OG1 THR B 31 MG MG B 302 1555 1555 1.96 LINK OG1 THR B 48 MG MG B 302 1555 1555 2.13 LINK O3G GNP B 301 MG MG B 302 1555 1555 2.05 LINK O1B GNP B 301 MG MG B 302 1555 1555 2.13 LINK MG MG B 302 O HOH B 417 1555 1555 2.13 LINK MG MG B 302 O HOH B 428 1555 1555 2.13 SITE 1 AC1 26 ASP A 26 ASN A 27 ALA A 28 GLY A 29 SITE 2 AC1 26 LYS A 30 THR A 31 THR A 32 ILE A 45 SITE 3 AC1 26 THR A 48 GLY A 70 ASN A 126 LYS A 127 SITE 4 AC1 26 ASP A 129 LEU A 130 SER A 159 ALA A 160 SITE 5 AC1 26 LEU A 161 MG A 302 HOH A 417 HOH A 426 SITE 6 AC1 26 HOH A 431 HOH A 432 HOH A 435 HOH A 436 SITE 7 AC1 26 HOH A 447 HOH A 452 SITE 1 AC2 5 THR A 31 THR A 48 GNP A 301 HOH A 432 SITE 2 AC2 5 HOH A 436 SITE 1 AC3 25 LEU B 25 ASP B 26 ASN B 27 ALA B 28 SITE 2 AC3 25 GLY B 29 LYS B 30 THR B 31 THR B 32 SITE 3 AC3 25 ILE B 45 PRO B 47 THR B 48 GLY B 70 SITE 4 AC3 25 ASN B 126 LYS B 127 ASP B 129 LEU B 130 SITE 5 AC3 25 SER B 159 ALA B 160 LEU B 161 MG B 302 SITE 6 AC3 25 HOH B 417 HOH B 423 HOH B 428 HOH B 430 SITE 7 AC3 25 HOH B 434 SITE 1 AC4 5 THR B 31 THR B 48 GNP B 301 HOH B 417 SITE 2 AC4 5 HOH B 428 CRYST1 69.700 98.600 102.430 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014347 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010142 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009763 0.00000