HEADER HYDROLASE-HYDROLASE INHIBITOR 29-APR-15 4ZJ4 OBSLTE 14-DEC-16 4ZJ4 5F8Z TITLE THE CRYSTAL STRUCTURE OF HUMAN PLASMA KALLIKREIN IN COMPLEX WITH ITS TITLE 2 PEPTIDE INHIBITOR PKALIN-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PLASMA KALLIKREIN LIGHT CHAIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 391-629; COMPND 5 SYNONYM: FLETCHER FACTOR,KININOGENIN,PLASMA PREKALLIKREIN; COMPND 6 EC: 3.4.21.34; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES; COMPND 9 MOL_ID: 2; COMPND 10 MOLECULE: CYS-PRO-ALA-ARG-PHE-M70-ALA-LEU-PHE-CYS; COMPND 11 CHAIN: B; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: KLKB1, KLK3; SOURCE 6 EXPRESSION_SYSTEM: KOMAGATAELLA PASTORIS; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 4922; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 11 ORGANISM_TAXID: 32630 KEYWDS PEPTIDE INHIBITOR, HYDROLASE-HYDROLASE INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR M.XU,L.JIANG,P.XU,Z.LUO,P.ANDREASEN,M.HUANG REVDAT 2 14-DEC-16 4ZJ4 1 REVDAT 1 18-NOV-15 4ZJ4 0 JRNL AUTH P.XU,M.XU,L.JIANG,Q.YANG,Z.LUO,Z.DAUTER,M.HUANG, JRNL AUTH 2 P.A.ANDREASEN JRNL TITL DESIGN OF SPECIFIC SERINE PROTEASE INHIBITORS BASED ON A JRNL TITL 2 VERSATILE PEPTIDE SCAFFOLD: CONVERSION OF A UROKINASE JRNL TITL 3 INHIBITOR TO A PLASMA KALLIKREIN INHIBITOR. JRNL REF J.MED.CHEM. V. 58 8868 2015 JRNL REFN ISSN 0022-2623 JRNL PMID 26536069 JRNL DOI 10.1021/ACS.JMEDCHEM.5B01128 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0049 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 50.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 3 NUMBER OF REFLECTIONS : 40208 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.238 REMARK 3 R VALUE (WORKING SET) : 0.237 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2132 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2675 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.54 REMARK 3 BIN R VALUE (WORKING SET) : 0.2910 REMARK 3 BIN FREE R VALUE SET COUNT : 149 REMARK 3 BIN FREE R VALUE : 0.2810 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1969 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 34 REMARK 3 SOLVENT ATOMS : 201 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : 0.06000 REMARK 3 B12 (A**2) : -0.01000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.097 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.093 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.064 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.686 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.935 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.921 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2036 ; 0.005 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 1907 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2727 ; 1.147 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4383 ; 0.719 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 224 ; 6.391 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 90 ;37.630 ;24.778 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 349 ;12.548 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;14.131 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 299 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2128 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 448 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 968 ; 0.841 ; 1.786 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 967 ; 0.841 ; 1.785 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1168 ; 1.539 ; 2.660 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 1169 ; 1.538 ; 2.661 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1068 ; 0.766 ; 1.959 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 1044 ; 0.735 ; 1.886 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 1524 ; 1.237 ; 2.787 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 2495 ; 5.174 ;15.666 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 2398 ; 4.826 ;15.002 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4ZJ4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000209392. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-JUN-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX300HS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 42363 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 5.700 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: 2ANY REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.09 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.42 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% PEG3350, 0.1M TRIS-HCL PH8.5, 20 REMARK 280 MM (NH4)2SO4, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 65 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/6 REMARK 290 6555 X-Y,X,Z+5/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 38.41533 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 19.20767 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 28.81150 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 9.60383 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 48.01917 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2350 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11360 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -77.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 21 CD GLU A 21 OE2 -0.123 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 37 -99.85 -107.62 REMARK 500 PRO A 60C -169.68 -77.13 REMARK 500 ASP A 65B -16.87 -152.06 REMARK 500 GLN A 118 85.53 -156.27 REMARK 500 SER A 214 -67.13 -125.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLY A 205 -12.66 REMARK 500 GLU A 217 11.18 REMARK 500 PHE B 5 13.72 REMARK 500 ALA B 6 -11.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 596 DISTANCE = 6.00 ANGSTROMS REMARK 525 HOH A 597 DISTANCE = 6.86 ANGSTROMS REMARK 525 HOH A 598 DISTANCE = 7.17 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MRZ B 100 DBREF 4ZJ4 A 16 246 UNP P03952 KLKB1_HUMAN 391 629 DBREF 4ZJ4 B 1 10 PDB 4ZJ4 4ZJ4 1 10 SEQADV 4ZJ4 GLU A 21 UNP P03952 ASN 396 ENGINEERED MUTATION SEQADV 4ZJ4 GLU A 72 UNP P03952 ASN 453 ENGINEERED MUTATION SEQADV 4ZJ4 GLU A 113 UNP P03952 ASN 494 ENGINEERED MUTATION SEQADV 4ZJ4 SER A 122 UNP P03952 CYS 503 ENGINEERED MUTATION SEQRES 1 A 239 ILE VAL GLY GLY THR GLU SER SER TRP GLY GLU TRP PRO SEQRES 2 A 239 TRP GLN VAL SER LEU GLN VAL LYS LEU THR ALA GLN ARG SEQRES 3 A 239 HIS LEU CYS GLY GLY SER LEU ILE GLY HIS GLN TRP VAL SEQRES 4 A 239 LEU THR ALA ALA HIS CYS PHE ASP GLY LEU PRO LEU GLN SEQRES 5 A 239 ASP VAL TRP ARG ILE TYR SER GLY ILE LEU GLU LEU SER SEQRES 6 A 239 ASP ILE THR LYS ASP THR PRO PHE SER GLN ILE LYS GLU SEQRES 7 A 239 ILE ILE ILE HIS GLN ASN TYR LYS VAL SER GLU GLY ASN SEQRES 8 A 239 HIS ASP ILE ALA LEU ILE LYS LEU GLN ALA PRO LEU GLU SEQRES 9 A 239 TYR THR GLU PHE GLN LYS PRO ILE SER LEU PRO SER LYS SEQRES 10 A 239 GLY ASP THR SER THR ILE TYR THR ASN CYS TRP VAL THR SEQRES 11 A 239 GLY TRP GLY PHE SER LYS GLU LYS GLY GLU ILE GLN ASN SEQRES 12 A 239 ILE LEU GLN LYS VAL ASN ILE PRO LEU VAL THR ASN GLU SEQRES 13 A 239 GLU CYS GLN LYS ARG TYR GLN ASP TYR LYS ILE THR GLN SEQRES 14 A 239 ARG MET VAL CYS ALA GLY TYR LYS GLU GLY GLY LYS ASP SEQRES 15 A 239 ALA CYS LYS GLY ASP SER GLY GLY PRO LEU VAL CYS LYS SEQRES 16 A 239 HIS ASN GLY MET TRP ARG LEU VAL GLY ILE THR SER TRP SEQRES 17 A 239 GLY GLU GLY CYS ALA ARG ARG GLU GLN PRO GLY VAL TYR SEQRES 18 A 239 THR LYS VAL ALA GLU TYR MET ASP TRP ILE LEU GLU LYS SEQRES 19 A 239 THR GLN SER SER ASP SEQRES 1 B 10 CYS PRO ALA ARG PHE ALA ALA LEU PHE CYS HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET MRZ B 100 9 HETNAM SO4 SULFATE ION HETNAM MRZ PIPERIDINE-1-CARBOXIMIDAMIDE FORMUL 3 SO4 5(O4 S 2-) FORMUL 8 MRZ C6 H13 N3 FORMUL 9 HOH *201(H2 O) HELIX 1 AA1 ALA A 55 ASP A 60 5 6 HELIX 2 AA2 GLU A 72 ILE A 76 5 5 HELIX 3 AA3 THR A 129 TYR A 133 5 5 HELIX 4 AA4 THR A 164 ARG A 171 1 8 HELIX 5 AA5 TYR A 234 ASP A 246 1 13 SHEET 1 AA1 8 THR A 20 GLU A 21 0 SHEET 2 AA1 8 GLN A 156 ASN A 159 -1 O LYS A 157 N THR A 20 SHEET 3 AA1 8 CYS A 136 GLY A 140 -1 N VAL A 138 O VAL A 158 SHEET 4 AA1 8 PRO A 198 HIS A 203 -1 O VAL A 200 N TRP A 137 SHEET 5 AA1 8 MET A 208B TRP A 215 -1 O MET A 208B N HIS A 203 SHEET 6 AA1 8 GLY A 226 LYS A 230 -1 O VAL A 227 N TRP A 215 SHEET 7 AA1 8 MET A 180 ALA A 183 -1 N VAL A 181 O TYR A 228 SHEET 8 AA1 8 LEU A 162 VAL A 163 -1 N VAL A 163 O CYS A 182 SHEET 1 AA2 6 TRP A 65D TYR A 67 0 SHEET 2 AA2 6 GLN A 30 LYS A 36 -1 N SER A 32 O TYR A 67 SHEET 3 AA2 6 GLN A 38B GLY A 48 -1 O CYS A 42 N LEU A 33 SHEET 4 AA2 6 TRP A 51 THR A 54 -1 O LEU A 53 N SER A 45 SHEET 5 AA2 6 ALA A 104 LEU A 108 -1 O ILE A 106 N VAL A 52 SHEET 6 AA2 6 ILE A 85 ILE A 90 -1 N LYS A 86 O LYS A 107 SSBOND 1 CYS A 42 CYS A 58 1555 1555 2.04 SSBOND 2 CYS A 136 CYS A 201 1555 1555 2.04 SSBOND 3 CYS A 168 CYS A 182 1555 1555 2.13 SSBOND 4 CYS A 191 CYS A 220 1555 1555 2.16 SSBOND 5 CYS B 1 CYS B 10 1555 1555 2.11 LINK CB ALA B 6 C1 MRZ B 100 1555 1555 1.52 SITE 1 AC1 7 LEU A 37 THR A 38 ALA A 38A ARG A 39 SITE 2 AC1 7 LYS A 119 LYS A 185 HOH A 525 SITE 1 AC2 8 TRP A 24 GLY A 25 TRP A 27 PRO A 28 SITE 2 AC2 8 GLY A 69 ILE A 70 LEU A 71 PHE A 117 SITE 1 AC3 5 GLY A 69 THR A 115 PHE A 117 GLN A 118 SITE 2 AC3 5 HOH A 462 SITE 1 AC4 7 GLU A 26 TRP A 27 TRP A 137 LYS A 157 SITE 2 AC4 7 HOH A 491 HOH A 515 HOH A 516 SITE 1 AC5 2 GLU A 21 PRO B 2 SITE 1 AC6 9 ASP A 189 ALA A 190 THR A 213 SER A 214 SITE 2 AC6 9 GLY A 216 GLY A 219 GLY A 226 PHE B 5 SITE 3 AC6 9 ALA B 6 CRYST1 90.279 90.279 57.623 90.00 90.00 120.00 P 65 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011077 0.006395 0.000000 0.00000 SCALE2 0.000000 0.012790 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017354 0.00000