HEADER ISOMERASE 29-APR-15 4ZK2 TITLE STRUCTURE OF ACETOBACTER ACETI PURE-S57D COMPND MOL_ID: 1; COMPND 2 MOLECULE: N5-CARBOXYAMINOIMIDAZOLE RIBONUCLEOTIDE MUTASE; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: N5-CAIR MUTASE,5-(CARBOXYAMINO)IMIDAZOLE RIBONUCLEOTIDE COMPND 5 MUTASE; COMPND 6 EC: 5.4.99.18; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACETOBACTER ACETI 1023; SOURCE 3 ORGANISM_TAXID: 1457393; SOURCE 4 GENE: PURE, AZ09_02690; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET23A KEYWDS ACIDOPHILE, PURE, PURINE BIOSYNTHESIS, ISOMERASE EXPDTA X-RAY DIFFRACTION AUTHOR K.L.SULLIVAN,T.J.KAPPOCK REVDAT 2 27-SEP-23 4ZK2 1 REMARK REVDAT 1 11-MAY-16 4ZK2 0 JRNL AUTH K.L.SULLIVAN,T.J.KAPPOCK JRNL TITL SERINE MUTANTS OF ACETOBACTER ACETI PURE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.85 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 11184 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.173 REMARK 3 FREE R VALUE : 0.221 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.770 REMARK 3 FREE R VALUE TEST SET COUNT : 534 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.8597 - 4.3638 0.99 2777 138 0.1560 0.2091 REMARK 3 2 4.3638 - 3.4639 1.00 2651 134 0.1578 0.2141 REMARK 3 3 3.4639 - 3.0261 1.00 2617 130 0.1980 0.2361 REMARK 3 4 3.0261 - 2.7495 0.99 2605 132 0.2332 0.2541 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.800 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2393 REMARK 3 ANGLE : 1.123 3275 REMARK 3 CHIRALITY : 0.045 395 REMARK 3 PLANARITY : 0.006 421 REMARK 3 DIHEDRAL : 11.609 861 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 16 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 21 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.3368 29.2082 35.4144 REMARK 3 T TENSOR REMARK 3 T11: 0.4241 T22: 0.4302 REMARK 3 T33: 0.4744 T12: 0.0518 REMARK 3 T13: -0.0147 T23: -0.0681 REMARK 3 L TENSOR REMARK 3 L11: 7.5455 L22: 3.8481 REMARK 3 L33: 5.2183 L12: 4.9563 REMARK 3 L13: -1.8693 L23: -2.7291 REMARK 3 S TENSOR REMARK 3 S11: -0.1097 S12: -0.2196 S13: 1.0120 REMARK 3 S21: 0.0155 S22: 0.7122 S23: 1.6391 REMARK 3 S31: 0.2946 S32: -0.2095 S33: -0.2562 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 31 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.9340 23.0674 41.2122 REMARK 3 T TENSOR REMARK 3 T11: 0.3791 T22: 0.5029 REMARK 3 T33: 0.3512 T12: 0.0229 REMARK 3 T13: 0.0310 T23: -0.0398 REMARK 3 L TENSOR REMARK 3 L11: 7.8843 L22: 3.8461 REMARK 3 L33: 6.4115 L12: 5.4334 REMARK 3 L13: 4.1740 L23: 2.9892 REMARK 3 S TENSOR REMARK 3 S11: 0.1461 S12: -0.4814 S13: -0.1865 REMARK 3 S21: 0.4370 S22: 0.0474 S23: 0.1766 REMARK 3 S31: 0.2661 S32: 0.1776 S33: -0.1174 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 47 THROUGH 61 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.3720 27.5157 36.2228 REMARK 3 T TENSOR REMARK 3 T11: 0.3808 T22: 0.4100 REMARK 3 T33: 0.3669 T12: 0.0765 REMARK 3 T13: -0.0217 T23: -0.0405 REMARK 3 L TENSOR REMARK 3 L11: 5.9204 L22: 7.5439 REMARK 3 L33: 7.1764 L12: 6.1405 REMARK 3 L13: 5.5243 L23: 4.9337 REMARK 3 S TENSOR REMARK 3 S11: 0.3812 S12: -0.4030 S13: 0.4832 REMARK 3 S21: 0.5249 S22: -0.3932 S23: 0.1553 REMARK 3 S31: 0.2018 S32: -0.0823 S33: -0.0049 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 62 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.5138 30.1423 28.7578 REMARK 3 T TENSOR REMARK 3 T11: 0.5771 T22: 0.4509 REMARK 3 T33: 0.6086 T12: 0.1581 REMARK 3 T13: 0.0148 T23: -0.1271 REMARK 3 L TENSOR REMARK 3 L11: 8.4251 L22: 8.5662 REMARK 3 L33: 4.0112 L12: 7.4839 REMARK 3 L13: -2.8852 L23: -2.9522 REMARK 3 S TENSOR REMARK 3 S11: 0.8849 S12: 0.4071 S13: 0.7758 REMARK 3 S21: 0.6248 S22: -0.2582 S23: 1.0849 REMARK 3 S31: -1.0113 S32: -0.5850 S33: -0.4418 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 73 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.5309 26.7029 27.0055 REMARK 3 T TENSOR REMARK 3 T11: 0.3505 T22: 0.3587 REMARK 3 T33: 0.3401 T12: 0.0038 REMARK 3 T13: 0.0299 T23: -0.0222 REMARK 3 L TENSOR REMARK 3 L11: 3.8974 L22: 1.4042 REMARK 3 L33: 6.5010 L12: 1.2305 REMARK 3 L13: 0.9566 L23: 1.0757 REMARK 3 S TENSOR REMARK 3 S11: -0.0258 S12: 0.1360 S13: 0.2493 REMARK 3 S21: -0.2033 S22: -0.1399 S23: 0.1283 REMARK 3 S31: -0.0565 S32: 0.1445 S33: 0.1414 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 108 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.4974 5.8708 34.5999 REMARK 3 T TENSOR REMARK 3 T11: 0.6081 T22: 0.7733 REMARK 3 T33: 0.4503 T12: -0.1573 REMARK 3 T13: 0.0376 T23: 0.0305 REMARK 3 L TENSOR REMARK 3 L11: 1.2830 L22: 4.5957 REMARK 3 L33: 4.3342 L12: -1.7505 REMARK 3 L13: -1.8196 L23: 4.4503 REMARK 3 S TENSOR REMARK 3 S11: 0.9842 S12: -1.2222 S13: -0.4681 REMARK 3 S21: 2.4296 S22: -0.0221 S23: -0.2745 REMARK 3 S31: 0.9829 S32: -0.0236 S33: -0.5290 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 115 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.0885 22.5728 26.5684 REMARK 3 T TENSOR REMARK 3 T11: 0.2684 T22: 0.2963 REMARK 3 T33: 0.2565 T12: 0.0319 REMARK 3 T13: 0.0008 T23: -0.0166 REMARK 3 L TENSOR REMARK 3 L11: 4.0260 L22: 8.1126 REMARK 3 L33: 3.8808 L12: 2.5452 REMARK 3 L13: 0.2262 L23: 1.2254 REMARK 3 S TENSOR REMARK 3 S11: 0.0451 S12: -0.0083 S13: 0.1021 REMARK 3 S21: 0.3507 S22: -0.0034 S23: -0.0378 REMARK 3 S31: -0.1102 S32: 0.3062 S33: -0.0550 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 155 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): 14.9809 32.3997 35.3811 REMARK 3 T TENSOR REMARK 3 T11: 0.4478 T22: 0.3722 REMARK 3 T33: 0.4127 T12: -0.0604 REMARK 3 T13: 0.0304 T23: -0.0420 REMARK 3 L TENSOR REMARK 3 L11: 4.7940 L22: 4.6269 REMARK 3 L33: 7.3401 L12: -4.7082 REMARK 3 L13: 5.9346 L23: -5.8264 REMARK 3 S TENSOR REMARK 3 S11: 0.1726 S12: -0.0481 S13: 0.5628 REMARK 3 S21: 0.1239 S22: -0.2680 S23: -0.2071 REMARK 3 S31: -0.4375 S32: 0.4101 S33: 0.1226 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 172 THROUGH 178 ) REMARK 3 ORIGIN FOR THE GROUP (A): 24.3179 15.0516 42.8386 REMARK 3 T TENSOR REMARK 3 T11: 0.4482 T22: 0.4529 REMARK 3 T33: 0.3724 T12: 0.1087 REMARK 3 T13: -0.0338 T23: -0.0945 REMARK 3 L TENSOR REMARK 3 L11: 6.0969 L22: 8.1306 REMARK 3 L33: 9.1687 L12: 1.7129 REMARK 3 L13: 1.2067 L23: -3.6627 REMARK 3 S TENSOR REMARK 3 S11: 0.6413 S12: 0.6356 S13: 0.1354 REMARK 3 S21: 1.2631 S22: -0.8556 S23: -0.6522 REMARK 3 S31: -0.0373 S32: -0.2288 S33: -0.5594 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 20 THROUGH 30 ) REMARK 3 ORIGIN FOR THE GROUP (A): 13.3628 28.3322 11.6231 REMARK 3 T TENSOR REMARK 3 T11: 0.3609 T22: 0.5102 REMARK 3 T33: 0.3002 T12: -0.0536 REMARK 3 T13: -0.0560 T23: 0.1311 REMARK 3 L TENSOR REMARK 3 L11: 5.7073 L22: 7.5933 REMARK 3 L33: 7.9573 L12: -0.9821 REMARK 3 L13: -1.7232 L23: 7.7264 REMARK 3 S TENSOR REMARK 3 S11: -0.3165 S12: 0.2873 S13: 0.0165 REMARK 3 S21: -0.2562 S22: 0.0001 S23: 0.7412 REMARK 3 S31: 0.1289 S32: 0.0175 S33: 0.2091 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 31 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.6998 22.6314 6.0558 REMARK 3 T TENSOR REMARK 3 T11: 0.5124 T22: 0.5234 REMARK 3 T33: 0.3417 T12: -0.0684 REMARK 3 T13: -0.0578 T23: 0.0477 REMARK 3 L TENSOR REMARK 3 L11: 6.0802 L22: 3.4016 REMARK 3 L33: 8.2470 L12: -2.2816 REMARK 3 L13: -0.6339 L23: 1.6777 REMARK 3 S TENSOR REMARK 3 S11: 0.0520 S12: 0.3495 S13: 0.0078 REMARK 3 S21: -0.9518 S22: 0.3671 S23: -0.1034 REMARK 3 S31: 0.1229 S32: -0.7563 S33: -0.4576 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 47 THROUGH 107 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.1982 24.5998 17.5795 REMARK 3 T TENSOR REMARK 3 T11: 0.4728 T22: 0.4343 REMARK 3 T33: 0.3109 T12: -0.0628 REMARK 3 T13: -0.0028 T23: 0.0333 REMARK 3 L TENSOR REMARK 3 L11: 4.2554 L22: 6.3494 REMARK 3 L33: 1.7444 L12: -2.7232 REMARK 3 L13: 0.2559 L23: -0.5155 REMARK 3 S TENSOR REMARK 3 S11: 0.1121 S12: 0.0859 S13: 0.3039 REMARK 3 S21: -0.1430 S22: -0.1248 S23: -0.3888 REMARK 3 S31: -0.1045 S32: 0.2675 S33: 0.0260 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 108 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.8945 4.8117 12.2751 REMARK 3 T TENSOR REMARK 3 T11: 0.6682 T22: 0.7179 REMARK 3 T33: 0.4480 T12: 0.0082 REMARK 3 T13: 0.0168 T23: 0.0025 REMARK 3 L TENSOR REMARK 3 L11: 5.2797 L22: 7.3980 REMARK 3 L33: 8.4190 L12: -4.2039 REMARK 3 L13: 0.7076 L23: -1.0187 REMARK 3 S TENSOR REMARK 3 S11: 0.6710 S12: 2.5208 S13: -0.7243 REMARK 3 S21: -3.1216 S22: -0.4860 S23: 0.3384 REMARK 3 S31: 0.2582 S32: 0.2402 S33: -0.0397 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 115 THROUGH 154 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.4004 21.9942 20.5003 REMARK 3 T TENSOR REMARK 3 T11: 0.3357 T22: 0.3391 REMARK 3 T33: 0.2543 T12: -0.0171 REMARK 3 T13: -0.0216 T23: -0.0122 REMARK 3 L TENSOR REMARK 3 L11: 3.5790 L22: 5.7860 REMARK 3 L33: 1.5235 L12: -1.5937 REMARK 3 L13: -0.4681 L23: -0.3143 REMARK 3 S TENSOR REMARK 3 S11: -0.0677 S12: -0.0800 S13: 0.0903 REMARK 3 S21: -0.1882 S22: 0.0824 S23: -0.2156 REMARK 3 S31: -0.1627 S32: -0.0551 S33: 0.0023 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 155 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.8374 35.4059 12.1452 REMARK 3 T TENSOR REMARK 3 T11: 0.5300 T22: 0.3994 REMARK 3 T33: 0.5540 T12: 0.0674 REMARK 3 T13: -0.1182 T23: 0.0944 REMARK 3 L TENSOR REMARK 3 L11: 2.6227 L22: 2.8622 REMARK 3 L33: 3.7938 L12: 2.7372 REMARK 3 L13: 2.9375 L23: 3.0820 REMARK 3 S TENSOR REMARK 3 S11: -0.2131 S12: -0.0352 S13: 1.1730 REMARK 3 S21: -0.5582 S22: -0.0065 S23: 0.6516 REMARK 3 S31: -0.2574 S32: -0.7255 S33: 0.2143 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 172 THROUGH 179 ) REMARK 3 ORIGIN FOR THE GROUP (A): -20.7555 19.8939 3.9116 REMARK 3 T TENSOR REMARK 3 T11: 0.5720 T22: 0.6981 REMARK 3 T33: 0.4934 T12: -0.0740 REMARK 3 T13: -0.1209 T23: -0.0071 REMARK 3 L TENSOR REMARK 3 L11: 9.5076 L22: 5.9550 REMARK 3 L33: 5.7366 L12: 5.4268 REMARK 3 L13: 4.9209 L23: 5.8278 REMARK 3 S TENSOR REMARK 3 S11: 0.1386 S12: 0.5210 S13: 0.3762 REMARK 3 S21: -0.4767 S22: -0.6285 S23: 0.9234 REMARK 3 S31: 0.4220 S32: -0.6126 S33: 0.2518 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZK2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-APR-15. REMARK 100 THE DEPOSITION ID IS D_1000209435. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-NOV-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-G REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97856 REMARK 200 MONOCHROMATOR : C(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 11198 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.749 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 11.10 REMARK 200 R MERGE (I) : 0.11700 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 23.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.80 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 10.90 REMARK 200 R MERGE FOR SHELL (I) : 0.73800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 4YCB CHAIN A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% (V/V) PEG 4000, 0.1 M TRIS-HCL, REMARK 280 0.2 M LITHIUM SULFATE, PH 8.3, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 -X,Y,-Z REMARK 290 6555 X,-Y,-Z REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z REMARK 290 9555 X+1/2,Y+1/2,Z+1/2 REMARK 290 10555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 11555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 12555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 13555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 14555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 15555 Y+1/2,X+1/2,-Z+1/2 REMARK 290 16555 -Y+1/2,-X+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 1.000000 0.000000 0.000000 49.85150 REMARK 290 SMTRY2 9 0.000000 1.000000 0.000000 49.85150 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 82.80300 REMARK 290 SMTRY1 10 -1.000000 0.000000 0.000000 49.85150 REMARK 290 SMTRY2 10 0.000000 -1.000000 0.000000 49.85150 REMARK 290 SMTRY3 10 0.000000 0.000000 1.000000 82.80300 REMARK 290 SMTRY1 11 0.000000 -1.000000 0.000000 49.85150 REMARK 290 SMTRY2 11 1.000000 0.000000 0.000000 49.85150 REMARK 290 SMTRY3 11 0.000000 0.000000 1.000000 82.80300 REMARK 290 SMTRY1 12 0.000000 1.000000 0.000000 49.85150 REMARK 290 SMTRY2 12 -1.000000 0.000000 0.000000 49.85150 REMARK 290 SMTRY3 12 0.000000 0.000000 1.000000 82.80300 REMARK 290 SMTRY1 13 -1.000000 0.000000 0.000000 49.85150 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 49.85150 REMARK 290 SMTRY3 13 0.000000 0.000000 -1.000000 82.80300 REMARK 290 SMTRY1 14 1.000000 0.000000 0.000000 49.85150 REMARK 290 SMTRY2 14 0.000000 -1.000000 0.000000 49.85150 REMARK 290 SMTRY3 14 0.000000 0.000000 -1.000000 82.80300 REMARK 290 SMTRY1 15 0.000000 1.000000 0.000000 49.85150 REMARK 290 SMTRY2 15 1.000000 0.000000 0.000000 49.85150 REMARK 290 SMTRY3 15 0.000000 0.000000 -1.000000 82.80300 REMARK 290 SMTRY1 16 0.000000 -1.000000 0.000000 49.85150 REMARK 290 SMTRY2 16 -1.000000 0.000000 0.000000 49.85150 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 82.80300 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 32380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38760 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -167.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLU A 3 REMARK 465 THR A 4 REMARK 465 ALA A 5 REMARK 465 PRO A 6 REMARK 465 LEU A 7 REMARK 465 PRO A 8 REMARK 465 SER A 9 REMARK 465 ALA A 10 REMARK 465 SER A 11 REMARK 465 SER A 12 REMARK 465 ALA A 13 REMARK 465 LEU A 14 REMARK 465 GLU A 15 REMARK 465 ASP A 16 REMARK 465 LYS A 17 REMARK 465 ALA A 18 REMARK 465 ALA A 19 REMARK 465 SER A 20 REMARK 465 THR A 179 REMARK 465 GLU A 180 REMARK 465 ASP A 181 REMARK 465 LYS A 182 REMARK 465 MET B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 GLU B 3 REMARK 465 THR B 4 REMARK 465 ALA B 5 REMARK 465 PRO B 6 REMARK 465 LEU B 7 REMARK 465 PRO B 8 REMARK 465 SER B 9 REMARK 465 ALA B 10 REMARK 465 SER B 11 REMARK 465 SER B 12 REMARK 465 ALA B 13 REMARK 465 LEU B 14 REMARK 465 GLU B 15 REMARK 465 ASP B 16 REMARK 465 LYS B 17 REMARK 465 ALA B 18 REMARK 465 ALA B 19 REMARK 465 GLU B 180 REMARK 465 ASP B 181 REMARK 465 LYS B 182 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN B 78 OH TYR B 154 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 123 41.93 -86.09 REMARK 500 GLN B 123 41.59 -86.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue EDO A 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1U11 RELATED DB: PDB REMARK 900 WILD TYPE AAPURE1 REMARK 900 RELATED ID: 4YCB RELATED DB: PDB REMARK 900 SINGLE-TRYPTOPHAN MUTANT OF AAPURE1 REMARK 900 RELATED ID: 4ZC8 RELATED DB: PDB REMARK 900 SAME PROTEIN WITH S57T MUTATION. REMARK 900 RELATED ID: 4Z7J RELATED DB: PDB REMARK 900 SAME PROTEIN WITH S57A MUTATION. REMARK 900 RELATED ID: 4ZJY RELATED DB: PDB REMARK 900 SAME PROTEIN WITH S57N MUTATION. REMARK 900 RELATED ID: 4ZMB RELATED DB: PDB REMARK 900 SAME PROTEIN WITH S57V AND Y154F MUTATIONS DBREF1 4ZK2 A 1 182 UNP A0A063X4U8_ACEAC DBREF2 4ZK2 A A0A063X4U8 1 182 DBREF1 4ZK2 B 1 182 UNP A0A063X4U8_ACEAC DBREF2 4ZK2 B A0A063X4U8 1 182 SEQADV 4ZK2 MET A 0 UNP A0A063X4U INITIATING METHIONINE SEQADV 4ZK2 ASP A 57 UNP A0A063X4U SER 57 ENGINEERED MUTATION SEQADV 4ZK2 MET B 0 UNP A0A063X4U INITIATING METHIONINE SEQADV 4ZK2 ASP B 57 UNP A0A063X4U SER 57 ENGINEERED MUTATION SEQRES 1 A 183 MET MET SER GLU THR ALA PRO LEU PRO SER ALA SER SER SEQRES 2 A 183 ALA LEU GLU ASP LYS ALA ALA SER ALA PRO VAL VAL GLY SEQRES 3 A 183 ILE ILE MET GLY SER GLN SER ASP TRP GLU THR MET ARG SEQRES 4 A 183 HIS ALA ASP ALA LEU LEU THR GLU LEU GLU ILE PRO HIS SEQRES 5 A 183 GLU THR LEU ILE VAL ASP ALA HIS ARG THR PRO ASP ARG SEQRES 6 A 183 LEU ALA ASP TYR ALA ARG THR ALA ALA GLU ARG GLY LEU SEQRES 7 A 183 ASN VAL ILE ILE ALA GLY ALA GLY GLY ALA ALA HIS LEU SEQRES 8 A 183 PRO GLY MET CYS ALA ALA TRP THR ARG LEU PRO VAL LEU SEQRES 9 A 183 GLY VAL PRO VAL GLU SER ARG ALA LEU LYS GLY MET ASP SEQRES 10 A 183 SER LEU LEU SER ILE VAL GLN MET PRO GLY GLY VAL PRO SEQRES 11 A 183 VAL GLY THR LEU ALA ILE GLY ALA SER GLY ALA LYS ASN SEQRES 12 A 183 ALA ALA LEU LEU ALA ALA SER ILE LEU ALA LEU TYR ASN SEQRES 13 A 183 PRO ALA LEU ALA ALA ARG LEU GLU THR TRP ARG ALA LEU SEQRES 14 A 183 GLN THR ALA SER VAL PRO ASN SER PRO ILE THR GLU ASP SEQRES 15 A 183 LYS SEQRES 1 B 183 MET MET SER GLU THR ALA PRO LEU PRO SER ALA SER SER SEQRES 2 B 183 ALA LEU GLU ASP LYS ALA ALA SER ALA PRO VAL VAL GLY SEQRES 3 B 183 ILE ILE MET GLY SER GLN SER ASP TRP GLU THR MET ARG SEQRES 4 B 183 HIS ALA ASP ALA LEU LEU THR GLU LEU GLU ILE PRO HIS SEQRES 5 B 183 GLU THR LEU ILE VAL ASP ALA HIS ARG THR PRO ASP ARG SEQRES 6 B 183 LEU ALA ASP TYR ALA ARG THR ALA ALA GLU ARG GLY LEU SEQRES 7 B 183 ASN VAL ILE ILE ALA GLY ALA GLY GLY ALA ALA HIS LEU SEQRES 8 B 183 PRO GLY MET CYS ALA ALA TRP THR ARG LEU PRO VAL LEU SEQRES 9 B 183 GLY VAL PRO VAL GLU SER ARG ALA LEU LYS GLY MET ASP SEQRES 10 B 183 SER LEU LEU SER ILE VAL GLN MET PRO GLY GLY VAL PRO SEQRES 11 B 183 VAL GLY THR LEU ALA ILE GLY ALA SER GLY ALA LYS ASN SEQRES 12 B 183 ALA ALA LEU LEU ALA ALA SER ILE LEU ALA LEU TYR ASN SEQRES 13 B 183 PRO ALA LEU ALA ALA ARG LEU GLU THR TRP ARG ALA LEU SEQRES 14 B 183 GLN THR ALA SER VAL PRO ASN SER PRO ILE THR GLU ASP SEQRES 15 B 183 LYS HET EDO A 201 4 HET EDO A 202 4 HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 3 EDO 2(C2 H6 O2) FORMUL 5 HOH *38(H2 O) HELIX 1 AA1 SER A 30 SER A 32 5 3 HELIX 2 AA2 ASP A 33 LEU A 47 1 15 HELIX 3 AA3 THR A 61 ALA A 72 1 12 HELIX 4 AA4 ALA A 73 GLY A 76 5 4 HELIX 5 AA5 HIS A 89 ALA A 96 1 8 HELIX 6 AA6 GLY A 114 GLN A 123 1 10 HELIX 7 AA7 GLY A 136 ALA A 152 1 17 HELIX 8 AA8 ASN A 155 SER A 172 1 18 HELIX 9 AA9 SER B 30 SER B 32 5 3 HELIX 10 AB1 ASP B 33 LEU B 47 1 15 HELIX 11 AB2 THR B 61 ALA B 72 1 12 HELIX 12 AB3 HIS B 89 THR B 98 1 10 HELIX 13 AB4 GLY B 114 GLN B 123 1 10 HELIX 14 AB5 GLY B 136 ALA B 152 1 17 HELIX 15 AB6 ASN B 155 SER B 172 1 18 SHEET 1 AA1 5 HIS A 51 ILE A 55 0 SHEET 2 AA1 5 VAL A 24 MET A 28 1 N ILE A 26 O LEU A 54 SHEET 3 AA1 5 VAL A 79 ALA A 84 1 O ILE A 81 N GLY A 25 SHEET 4 AA1 5 VAL A 102 PRO A 106 1 O LEU A 103 N ALA A 82 SHEET 5 AA1 5 GLY A 131 THR A 132 1 O GLY A 131 N GLY A 104 SHEET 1 AA2 5 HIS B 51 ILE B 55 0 SHEET 2 AA2 5 VAL B 24 MET B 28 1 N ILE B 26 O GLU B 52 SHEET 3 AA2 5 VAL B 79 GLY B 85 1 O ILE B 81 N GLY B 25 SHEET 4 AA2 5 VAL B 102 VAL B 107 1 O LEU B 103 N ILE B 80 SHEET 5 AA2 5 GLY B 131 THR B 132 1 O GLY B 131 N GLY B 104 SITE 1 AC1 2 PRO A 174 ASN A 175 SITE 1 AC2 3 ARG A 110 GLY A 136 ALA A 137 CRYST1 99.703 99.703 165.606 90.00 90.00 90.00 I 4 2 2 32 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010030 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010030 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006038 0.00000