HEADER HYDROLASE 30-APR-15 4ZKF TITLE CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE 12 COMPND MOL_ID: 1; COMPND 2 MOLECULE: 2',5'-PHOSPHODIESTERASE 12; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 154-609; COMPND 5 SYNONYM: 2-PDE,MITOCHONDRIAL DEADENYLASE; COMPND 6 EC: 3.1.4.-,3.1.13.4; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: PDE12; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS DIESTERASE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.Y.KIM,T.KOHNO,T.MORI,K.KITANO,T.HAKOSHIMA REVDAT 4 20-MAR-24 4ZKF 1 LINK REVDAT 3 19-FEB-20 4ZKF 1 SOURCE REMARK REVDAT 2 24-JUN-15 4ZKF 1 TITLE REVDAT 1 17-JUN-15 4ZKF 0 JRNL AUTH S.Y.KIM,T.KOHNO,T.MORI,K.KITANO,T.HAKOSHIMA JRNL TITL CRYSTAL STRUCTURE OF HUMAN PHOSPHODIESTERASE JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.82 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.4_1496) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.82 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.76 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 43889 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.190 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2237 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.7608 - 4.5805 1.00 2788 146 0.1706 0.1713 REMARK 3 2 4.5805 - 3.6371 1.00 2698 133 0.1359 0.1425 REMARK 3 3 3.6371 - 3.1777 1.00 2637 146 0.1506 0.1693 REMARK 3 4 3.1777 - 2.8874 1.00 2618 140 0.1624 0.2056 REMARK 3 5 2.8874 - 2.6805 1.00 2592 144 0.1673 0.1708 REMARK 3 6 2.6805 - 2.5225 1.00 2641 122 0.1739 0.1954 REMARK 3 7 2.5225 - 2.3962 1.00 2564 159 0.1691 0.1905 REMARK 3 8 2.3962 - 2.2919 1.00 2589 122 0.1664 0.1976 REMARK 3 9 2.2919 - 2.2037 1.00 2613 126 0.1671 0.2314 REMARK 3 10 2.2037 - 2.1277 1.00 2586 137 0.1703 0.2099 REMARK 3 11 2.1277 - 2.0612 1.00 2584 135 0.1699 0.2299 REMARK 3 12 2.0612 - 2.0023 1.00 2573 126 0.1666 0.1859 REMARK 3 13 2.0023 - 1.9496 1.00 2581 147 0.1768 0.2161 REMARK 3 14 1.9496 - 1.9020 1.00 2526 148 0.1918 0.2155 REMARK 3 15 1.9020 - 1.8588 1.00 2547 168 0.2160 0.2788 REMARK 3 16 1.8588 - 1.8192 0.98 2515 138 0.2404 0.2479 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3757 REMARK 3 ANGLE : 1.128 5114 REMARK 3 CHIRALITY : 0.047 561 REMARK 3 PLANARITY : 0.006 663 REMARK 3 DIHEDRAL : 13.452 1370 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZKF COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 07-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000209448. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SPRING-8 REMARK 200 BEAMLINE : BL41XU REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX225HE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : PHASER REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 43956 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.820 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.50900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.68 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 3350, SODIUM CHLORIDE, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.90850 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.34500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 49.92000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.34500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.90850 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 49.92000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 230 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20080 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1119 O HOH A 1139 1.92 REMARK 500 NH2 ARG A 159 OD2 ASP A 254 1.93 REMARK 500 O HOH A 1149 O HOH A 1248 1.97 REMARK 500 OD2 ASP A 229 O HOH A 801 1.99 REMARK 500 NE ARG A 354 O HOH A 802 2.00 REMARK 500 O HOH A 1141 O HOH A 1168 2.00 REMARK 500 OE1 GLU A 582 O HOH A 803 2.05 REMARK 500 O HOH A 844 O HOH A 1234 2.11 REMARK 500 O HOH A 1008 O HOH A 1190 2.11 REMARK 500 O HOH A 1005 O HOH A 1197 2.12 REMARK 500 O HOH A 1099 O HOH A 1193 2.13 REMARK 500 O HOH A 1174 O HOH A 1260 2.16 REMARK 500 O HOH A 806 O HOH A 1211 2.16 REMARK 500 O HOH A 853 O HOH A 1105 2.17 REMARK 500 OE1 GLU A 406 O HOH A 804 2.19 REMARK 500 O HOH A 956 O HOH A 1063 2.19 REMARK 500 O HOH A 902 O HOH A 1046 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1153 O HOH A 1239 3554 2.04 REMARK 500 O HOH A 951 O HOH A 1227 1655 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 229 CB - CG - OD1 ANGL. DEV. = 5.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 303 101.69 64.76 REMARK 500 ALA A 308 -69.98 -98.16 REMARK 500 GLN A 309 -24.82 -11.82 REMARK 500 SER A 360 -55.55 -122.70 REMARK 500 LYS A 377 -90.25 -96.05 REMARK 500 GLN A 378 -64.07 -125.50 REMARK 500 HIS A 397 44.49 -144.22 REMARK 500 CYS A 530 53.36 -148.93 REMARK 500 GLN A 588 -58.59 70.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1262 DISTANCE = 6.67 ANGSTROMS REMARK 525 HOH A1263 DISTANCE = 6.90 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 701 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 351 OE2 REMARK 620 2 HOH A 823 O 170.8 REMARK 620 3 HOH A 865 O 98.2 86.7 REMARK 620 4 HOH A 881 O 92.7 82.9 168.6 REMARK 620 5 HOH A 892 O 85.0 87.6 86.9 97.4 REMARK 620 6 HOH A1145 O 96.8 91.2 87.5 87.9 174.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 702 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 496 OD2 REMARK 620 2 ASN A 498 OD1 109.7 REMARK 620 3 HOH A 865 O 86.0 134.0 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 702 DBREF 4ZKF A 154 609 UNP Q6L8Q7 PDE12_HUMAN 154 609 SEQADV 4ZKF GLY A 148 UNP Q6L8Q7 EXPRESSION TAG SEQADV 4ZKF ILE A 149 UNP Q6L8Q7 EXPRESSION TAG SEQADV 4ZKF ASP A 150 UNP Q6L8Q7 EXPRESSION TAG SEQADV 4ZKF PRO A 151 UNP Q6L8Q7 EXPRESSION TAG SEQADV 4ZKF PHE A 152 UNP Q6L8Q7 EXPRESSION TAG SEQADV 4ZKF THR A 153 UNP Q6L8Q7 EXPRESSION TAG SEQRES 1 A 462 GLY ILE ASP PRO PHE THR LYS TYR LYS VAL GLU ARG ASN SEQRES 2 A 462 PRO PRO ALA PHE THR GLU LEU GLN LEU PRO ARG TYR ILE SEQRES 3 A 462 MET ALA GLY PHE PRO VAL CYS PRO LYS LEU SER LEU GLU SEQRES 4 A 462 PHE GLY ASP PRO ALA SER SER LEU PHE ARG TRP TYR LYS SEQRES 5 A 462 GLU ALA LYS PRO GLY ALA ALA GLU PRO GLU VAL GLY VAL SEQRES 6 A 462 PRO SER SER LEU SER PRO SER SER PRO SER SER SER TRP SEQRES 7 A 462 THR GLU THR ASP VAL GLU GLU ARG VAL TYR THR PRO SER SEQRES 8 A 462 ASN ALA ASP ILE GLY LEU ARG LEU LYS LEU HIS CYS THR SEQRES 9 A 462 PRO GLY ASP GLY GLN ARG PHE GLY HIS SER ARG GLU LEU SEQRES 10 A 462 GLU SER VAL CYS VAL VAL GLU ALA GLY PRO GLY THR CYS SEQRES 11 A 462 THR PHE ASP HIS ARG HIS LEU TYR THR LYS LYS VAL THR SEQRES 12 A 462 GLU ASP ALA LEU ILE ARG THR VAL SER TYR ASN ILE LEU SEQRES 13 A 462 ALA ASP THR TYR ALA GLN THR GLU PHE SER ARG THR VAL SEQRES 14 A 462 LEU TYR PRO TYR CYS ALA PRO TYR ALA LEU GLU LEU ASP SEQRES 15 A 462 TYR ARG GLN ASN LEU ILE GLN LYS GLU LEU THR GLY TYR SEQRES 16 A 462 ASN ALA ASP VAL ILE CYS LEU GLN GLU VAL ASP ARG ALA SEQRES 17 A 462 VAL PHE SER ASP SER LEU VAL PRO ALA LEU GLU ALA PHE SEQRES 18 A 462 GLY LEU GLU GLY VAL PHE ARG ILE LYS GLN HIS GLU GLY SEQRES 19 A 462 LEU ALA THR PHE TYR ARG LYS SER LYS PHE SER LEU LEU SEQRES 20 A 462 SER GLN HIS ASP ILE SER PHE TYR GLU ALA LEU GLU SER SEQRES 21 A 462 ASP PRO LEU HIS LYS GLU LEU LEU GLU LYS LEU VAL LEU SEQRES 22 A 462 TYR PRO SER ALA GLN GLU LYS VAL LEU GLN ARG SER SER SEQRES 23 A 462 VAL LEU GLN VAL SER VAL LEU GLN SER THR LYS ASP SER SEQRES 24 A 462 SER LYS ARG ILE CYS VAL ALA ASN THR HIS LEU TYR TRP SEQRES 25 A 462 HIS PRO LYS GLY GLY TYR ILE ARG LEU ILE GLN MET ALA SEQRES 26 A 462 VAL ALA LEU ALA HIS ILE ARG HIS VAL SER CYS ASP LEU SEQRES 27 A 462 TYR PRO GLY ILE PRO VAL ILE PHE CYS GLY ASP PHE ASN SEQRES 28 A 462 SER THR PRO SER THR GLY MET TYR HIS PHE VAL ILE ASN SEQRES 29 A 462 GLY SER ILE PRO GLU ASP HIS GLU ASP TRP ALA SER ASN SEQRES 30 A 462 GLY GLU GLU GLU ARG CYS ASN MET SER LEU THR HIS PHE SEQRES 31 A 462 PHE LYS LEU LYS SER ALA CYS GLY GLU PRO ALA TYR THR SEQRES 32 A 462 ASN TYR VAL GLY GLY PHE HIS GLY CYS LEU ASP TYR ILE SEQRES 33 A 462 PHE ILE ASP LEU ASN ALA LEU GLU VAL GLU GLN VAL ILE SEQRES 34 A 462 PRO LEU PRO SER HIS GLU GLU VAL THR THR HIS GLN ALA SEQRES 35 A 462 LEU PRO SER VAL SER HIS PRO SER ASP HIS ILE ALA LEU SEQRES 36 A 462 VAL CYS ASP LEU LYS TRP LYS HET MG A 701 1 HET MG A 702 1 HETNAM MG MAGNESIUM ION FORMUL 2 MG 2(MG 2+) FORMUL 4 HOH *463(H2 O) HELIX 1 AA1 PHE A 152 LYS A 156 5 5 HELIX 2 AA2 ASP A 189 SER A 193 5 5 HELIX 3 AA3 PRO A 221 SER A 223 5 3 HELIX 4 AA4 SER A 238 ILE A 242 5 5 HELIX 5 AA5 THR A 278 HIS A 283 1 6 HELIX 6 AA6 LEU A 284 THR A 286 5 3 HELIX 7 AA7 ALA A 304 GLN A 309 1 6 HELIX 8 AA8 THR A 310 VAL A 316 1 7 HELIX 9 AA9 ALA A 322 GLU A 327 1 6 HELIX 10 AB1 GLU A 327 TYR A 342 1 16 HELIX 11 AB2 ASP A 353 SER A 360 1 8 HELIX 12 AB3 SER A 360 PHE A 368 1 9 HELIX 13 AB4 PHE A 401 ASP A 408 1 8 HELIX 14 AB5 HIS A 411 VAL A 419 1 9 HELIX 15 AB6 TYR A 421 GLN A 430 1 10 HELIX 16 AB7 GLY A 463 ASP A 484 1 22 HELIX 17 AB8 THR A 503 GLY A 512 1 10 HELIX 18 AB9 HIS A 518 SER A 523 5 6 HELIX 19 AC1 SER A 580 THR A 585 1 6 SHEET 1 AA1 2 ALA A 163 GLN A 168 0 SHEET 2 AA1 2 LYS A 182 GLU A 186 -1 O SER A 184 N THR A 165 SHEET 1 AA2 2 ILE A 173 MET A 174 0 SHEET 2 AA2 2 VAL A 270 GLU A 271 1 O GLU A 271 N ILE A 173 SHEET 1 AA3 4 TRP A 225 GLU A 227 0 SHEET 2 AA3 4 LEU A 194 GLU A 200 -1 N LYS A 199 O THR A 226 SHEET 3 AA3 4 LEU A 246 THR A 251 -1 O LYS A 247 N TYR A 198 SHEET 4 AA3 4 ARG A 262 GLU A 265 -1 O ARG A 262 N CYS A 250 SHEET 1 AA4 6 LEU A 370 ILE A 376 0 SHEET 2 AA4 6 GLY A 381 ARG A 387 -1 O LEU A 382 N ARG A 375 SHEET 3 AA4 6 VAL A 346 VAL A 352 -1 N LEU A 349 O ALA A 383 SHEET 4 AA4 6 LEU A 294 ASN A 301 1 N VAL A 298 O CYS A 348 SHEET 5 AA4 6 LEU A 602 TRP A 608 -1 O CYS A 604 N THR A 297 SHEET 6 AA4 6 LEU A 570 VAL A 575 -1 N GLU A 573 O ASP A 605 SHEET 1 AA5 3 PHE A 391 GLN A 396 0 SHEET 2 AA5 3 VAL A 434 SER A 442 -1 O VAL A 439 N SER A 395 SHEET 3 AA5 3 ILE A 399 SER A 400 -1 N ILE A 399 O LEU A 435 SHEET 1 AA6 6 PHE A 391 GLN A 396 0 SHEET 2 AA6 6 VAL A 434 SER A 442 -1 O VAL A 439 N SER A 395 SHEET 3 AA6 6 ARG A 449 HIS A 456 -1 O VAL A 452 N SER A 438 SHEET 4 AA6 6 VAL A 491 ASP A 496 1 O ILE A 492 N ALA A 453 SHEET 5 AA6 6 ASP A 561 ASP A 566 -1 O PHE A 564 N PHE A 493 SHEET 6 AA6 6 LEU A 540 SER A 542 -1 N LYS A 541 O ILE A 565 SHEET 1 AA7 2 SER A 513 ILE A 514 0 SHEET 2 AA7 2 LEU A 534 THR A 535 -1 O LEU A 534 N ILE A 514 SHEET 1 AA8 2 ASN A 551 VAL A 553 0 SHEET 2 AA8 2 PHE A 556 GLY A 558 -1 O PHE A 556 N VAL A 553 LINK OE2 GLU A 351 MG MG A 701 1555 1555 1.98 LINK OD2 ASP A 496 MG MG A 702 1555 1555 2.57 LINK OD1 ASN A 498 MG MG A 702 1555 1555 2.76 LINK MG MG A 701 O HOH A 823 1555 1555 2.32 LINK MG MG A 701 O HOH A 865 1555 1555 2.21 LINK MG MG A 701 O HOH A 881 1555 1555 2.04 LINK MG MG A 701 O HOH A 892 1555 1555 2.19 LINK MG MG A 701 O HOH A1145 1555 1555 2.23 LINK MG MG A 702 O HOH A 865 1555 1555 2.60 CISPEP 1 LEU A 590 PRO A 591 0 -4.99 SITE 1 AC1 6 GLU A 351 HOH A 823 HOH A 865 HOH A 881 SITE 2 AC1 6 HOH A 892 HOH A1145 SITE 1 AC2 4 HIS A 456 ASP A 496 ASN A 498 HOH A 865 CRYST1 45.817 99.840 104.690 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021826 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010016 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009552 0.00000