HEADER METAL BINDING PROTEIN/DNA 01-MAY-15 4ZL2 OBSLTE 15-MAR-17 4ZL2 5X6H TITLE CRYSTAL STRUCTURE OF SMAD5-MH1/GC-BRE DNA COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: MOTHERS AGAINST DECAPENTAPLEGIC HOMOLOG 5; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: MH1 DOMAIN (UNP RESIDUES 1-143); COMPND 5 SYNONYM: MOTHERS AGAINST DPP HOMOLOG 5,DWARFIN-C,DWF-C,SMAD FAMILY COMPND 6 MEMBER 5,MSMAD5; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'-D(P*GP*TP*AP*TP*GP*GP*CP*GP*CP*CP*AP*TP*AP*C)-3'); COMPND 10 CHAIN: E, F, G, H; COMPND 11 SYNONYM: GC-BRE; COMPND 12 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: SMAD5, MADH5, MSMAD5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21B; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630 KEYWDS SMAD5, MH1 DOMAIN, GC-BRE, METAL BINDING PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR N.CHAI,J.WANG,Z.X.WANG,J.W.WU REVDAT 3 15-MAR-17 4ZL2 1 OBSLTE REVDAT 2 28-OCT-15 4ZL2 1 JRNL REVDAT 1 02-SEP-15 4ZL2 0 JRNL AUTH N.CHAI,W.X.LI,J.WANG,Z.X.WANG,S.M.YANG,J.W.WU JRNL TITL STRUCTURAL BASIS FOR THE SMAD5 MH1 DOMAIN TO RECOGNIZE JRNL TITL 2 DIFFERENT DNA SEQUENCES. JRNL REF NUCLEIC ACIDS RES. V. 43 9051 2015 JRNL REFN ESSN 1362-4962 JRNL PMID 26304548 JRNL DOI 10.1093/NAR/GKV848 REMARK 2 REMARK 2 RESOLUTION. 3.06 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.06 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.37 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 14738 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.252 REMARK 3 R VALUE (WORKING SET) : 0.250 REMARK 3 FREE R VALUE : 0.274 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.930 REMARK 3 FREE R VALUE TEST SET COUNT : 727 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.3693 - 5.2231 0.90 2606 143 0.2173 0.2596 REMARK 3 2 5.2231 - 4.1466 0.99 2870 138 0.2670 0.2986 REMARK 3 3 4.1466 - 3.6227 1.00 2917 140 0.2623 0.2682 REMARK 3 4 3.6227 - 3.2915 0.99 2840 158 0.2589 0.2827 REMARK 3 5 3.2915 - 3.0557 0.95 2778 148 0.2910 0.3110 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.830 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 5205 REMARK 3 ANGLE : 1.053 7237 REMARK 3 CHIRALITY : 0.049 771 REMARK 3 PLANARITY : 0.005 711 REMARK 3 DIHEDRAL : 23.037 2089 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 29 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 15 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.0343 22.9417 -4.4197 REMARK 3 T TENSOR REMARK 3 T11: 2.1944 T22: 1.7309 REMARK 3 T33: 1.5959 T12: 0.7251 REMARK 3 T13: -0.0737 T23: 0.2161 REMARK 3 L TENSOR REMARK 3 L11: 5.0230 L22: 4.1659 REMARK 3 L33: 8.7521 L12: -2.9568 REMARK 3 L13: -3.3495 L23: 4.0218 REMARK 3 S TENSOR REMARK 3 S11: -3.2532 S12: -1.9913 S13: -0.5009 REMARK 3 S21: 2.4828 S22: 0.8871 S23: 0.3256 REMARK 3 S31: 1.6677 S32: -1.1435 S33: 2.5121 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 28 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.8500 30.6366 -7.3630 REMARK 3 T TENSOR REMARK 3 T11: 0.7682 T22: 1.2762 REMARK 3 T33: 1.0843 T12: 0.1223 REMARK 3 T13: 0.1243 T23: -0.0193 REMARK 3 L TENSOR REMARK 3 L11: 4.2742 L22: 8.7345 REMARK 3 L33: 4.9102 L12: 1.2916 REMARK 3 L13: 0.2716 L23: 1.3904 REMARK 3 S TENSOR REMARK 3 S11: -0.3267 S12: 1.0624 S13: -0.5097 REMARK 3 S21: 0.6953 S22: 0.8173 S23: -1.9621 REMARK 3 S31: 1.1733 S32: 1.6378 S33: -0.5816 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 45 THROUGH 67 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.2653 30.4179 8.1057 REMARK 3 T TENSOR REMARK 3 T11: 1.3171 T22: 1.4396 REMARK 3 T33: 0.8702 T12: -0.1647 REMARK 3 T13: -0.0346 T23: -0.0363 REMARK 3 L TENSOR REMARK 3 L11: 6.9128 L22: 4.3884 REMARK 3 L33: 2.9648 L12: 3.2123 REMARK 3 L13: -0.6377 L23: 1.2579 REMARK 3 S TENSOR REMARK 3 S11: 0.8876 S12: 2.1546 S13: -1.1004 REMARK 3 S21: 1.6292 S22: 0.0908 S23: -1.0537 REMARK 3 S31: 0.9447 S32: -1.0466 S33: -1.2284 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 68 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.4032 43.6760 -5.3581 REMARK 3 T TENSOR REMARK 3 T11: 0.7934 T22: 1.4735 REMARK 3 T33: 1.3653 T12: -0.2395 REMARK 3 T13: 0.1679 T23: -0.0303 REMARK 3 L TENSOR REMARK 3 L11: 2.9340 L22: 3.4356 REMARK 3 L33: 2.9130 L12: -3.2358 REMARK 3 L13: 2.9260 L23: -3.2372 REMARK 3 S TENSOR REMARK 3 S11: 1.5991 S12: 2.3045 S13: 1.0516 REMARK 3 S21: 1.9017 S22: -1.5026 S23: 2.7197 REMARK 3 S31: -0.4563 S32: -0.3478 S33: 0.3073 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 73 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.0755 32.7447 -9.7156 REMARK 3 T TENSOR REMARK 3 T11: 0.6427 T22: 1.0733 REMARK 3 T33: 0.5500 T12: -0.0383 REMARK 3 T13: 0.0417 T23: -0.0681 REMARK 3 L TENSOR REMARK 3 L11: 3.7714 L22: 3.5453 REMARK 3 L33: 5.7336 L12: -0.0187 REMARK 3 L13: 0.1951 L23: 0.1897 REMARK 3 S TENSOR REMARK 3 S11: 0.7764 S12: 1.1574 S13: 0.0052 REMARK 3 S21: -0.0667 S22: -0.3558 S23: -0.3047 REMARK 3 S31: 1.4865 S32: -0.1466 S33: -0.1805 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 94 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -11.7489 26.3060 -5.8235 REMARK 3 T TENSOR REMARK 3 T11: 1.6400 T22: 1.5351 REMARK 3 T33: 1.4120 T12: -0.2765 REMARK 3 T13: 0.0392 T23: 0.1518 REMARK 3 L TENSOR REMARK 3 L11: 4.9222 L22: 5.2942 REMARK 3 L33: 4.3932 L12: 4.6264 REMARK 3 L13: 4.4757 L23: 4.7348 REMARK 3 S TENSOR REMARK 3 S11: 1.3519 S12: -0.9830 S13: -1.1482 REMARK 3 S21: 2.6745 S22: 0.0749 S23: 2.6641 REMARK 3 S31: 2.2133 S32: -3.2780 S33: -1.2341 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 104 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.0899 36.6280 4.7854 REMARK 3 T TENSOR REMARK 3 T11: 1.5688 T22: 1.5613 REMARK 3 T33: 0.6676 T12: -0.2292 REMARK 3 T13: 0.2108 T23: -0.1994 REMARK 3 L TENSOR REMARK 3 L11: 2.2045 L22: 4.4540 REMARK 3 L33: 2.8421 L12: -0.7579 REMARK 3 L13: -0.7150 L23: -2.8392 REMARK 3 S TENSOR REMARK 3 S11: -0.2685 S12: -0.8941 S13: -0.4216 REMARK 3 S21: 3.3161 S22: 0.7541 S23: 1.0858 REMARK 3 S31: 0.1937 S32: -2.6861 S33: -0.5570 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 117 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.4595 33.5027 1.0387 REMARK 3 T TENSOR REMARK 3 T11: 1.0255 T22: 1.5789 REMARK 3 T33: 0.8697 T12: -0.2322 REMARK 3 T13: 0.1151 T23: 0.0071 REMARK 3 L TENSOR REMARK 3 L11: 6.2659 L22: 3.4706 REMARK 3 L33: 2.3049 L12: 1.0304 REMARK 3 L13: 0.5037 L23: 2.9981 REMARK 3 S TENSOR REMARK 3 S11: 0.4223 S12: -2.2731 S13: 0.3572 REMARK 3 S21: 0.1938 S22: -0.3219 S23: 0.1601 REMARK 3 S31: -0.0930 S32: 0.0044 S33: 0.1673 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 13 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): -6.7169 27.0209 -35.0577 REMARK 3 T TENSOR REMARK 3 T11: 1.1136 T22: 1.3097 REMARK 3 T33: 1.5025 T12: -0.3179 REMARK 3 T13: -0.0861 T23: 0.0735 REMARK 3 L TENSOR REMARK 3 L11: 6.2191 L22: 4.0681 REMARK 3 L33: 5.0639 L12: -1.4881 REMARK 3 L13: -0.0914 L23: 0.1901 REMARK 3 S TENSOR REMARK 3 S11: -0.4231 S12: 0.4766 S13: -3.1818 REMARK 3 S21: -1.2426 S22: 1.0479 S23: 2.1707 REMARK 3 S31: 1.6706 S32: -1.9597 S33: -0.4190 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 45 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.2032 33.0388 -46.4884 REMARK 3 T TENSOR REMARK 3 T11: 1.4568 T22: 1.4006 REMARK 3 T33: 1.0194 T12: 0.0298 REMARK 3 T13: -0.0986 T23: -0.1321 REMARK 3 L TENSOR REMARK 3 L11: 2.9883 L22: 5.9887 REMARK 3 L33: 3.6710 L12: -2.2897 REMARK 3 L13: -1.2958 L23: -1.2695 REMARK 3 S TENSOR REMARK 3 S11: 0.5117 S12: 1.2093 S13: -1.0235 REMARK 3 S21: -2.1126 S22: -0.5020 S23: 0.3140 REMARK 3 S31: 1.1866 S32: -0.5255 S33: -0.0719 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 73 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.0350 32.8404 -31.4233 REMARK 3 T TENSOR REMARK 3 T11: 0.7078 T22: 1.0967 REMARK 3 T33: 0.5742 T12: 0.1453 REMARK 3 T13: 0.1577 T23: 0.0397 REMARK 3 L TENSOR REMARK 3 L11: 3.6149 L22: 3.0238 REMARK 3 L33: 4.4586 L12: 1.5482 REMARK 3 L13: 0.8004 L23: -0.4575 REMARK 3 S TENSOR REMARK 3 S11: 0.7874 S12: -1.0300 S13: -0.2287 REMARK 3 S21: -0.0969 S22: -1.2822 S23: -0.1864 REMARK 3 S31: 0.9246 S32: -0.0710 S33: 0.4815 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 94 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9740 31.7881 -40.9078 REMARK 3 T TENSOR REMARK 3 T11: 1.2502 T22: 1.4059 REMARK 3 T33: 0.8648 T12: 0.3777 REMARK 3 T13: 0.2274 T23: -0.0137 REMARK 3 L TENSOR REMARK 3 L11: 3.8124 L22: 4.2804 REMARK 3 L33: 7.0296 L12: -0.7160 REMARK 3 L13: 2.0299 L23: -2.7928 REMARK 3 S TENSOR REMARK 3 S11: 0.6855 S12: 0.5652 S13: -0.1051 REMARK 3 S21: -1.7097 S22: -0.9248 S23: -0.9044 REMARK 3 S31: 2.7317 S32: 2.5625 S33: 0.2423 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 117 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): 8.5101 33.4650 -42.1832 REMARK 3 T TENSOR REMARK 3 T11: 1.2380 T22: 1.6566 REMARK 3 T33: 0.9098 T12: 0.3853 REMARK 3 T13: 0.1838 T23: 0.1262 REMARK 3 L TENSOR REMARK 3 L11: 4.6860 L22: 2.4894 REMARK 3 L33: 2.1327 L12: -0.5602 REMARK 3 L13: 0.6462 L23: -1.3467 REMARK 3 S TENSOR REMARK 3 S11: 0.3003 S12: 1.5382 S13: 0.9592 REMARK 3 S21: -0.3426 S22: -0.2581 S23: -0.2009 REMARK 3 S31: 0.4382 S32: 0.5233 S33: 0.1175 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 13 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.8037 7.2385 21.9422 REMARK 3 T TENSOR REMARK 3 T11: 1.4973 T22: 0.8945 REMARK 3 T33: 1.4109 T12: -0.0205 REMARK 3 T13: -0.0598 T23: -0.0887 REMARK 3 L TENSOR REMARK 3 L11: 6.1996 L22: 4.4348 REMARK 3 L33: 7.8322 L12: 0.6445 REMARK 3 L13: 0.1009 L23: 1.8260 REMARK 3 S TENSOR REMARK 3 S11: 0.8302 S12: -0.5170 S13: -2.6743 REMARK 3 S21: 0.9335 S22: -0.9985 S23: 0.8187 REMARK 3 S31: 3.4349 S32: -1.0284 S33: -0.0494 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 45 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.6774 14.4945 33.3579 REMARK 3 T TENSOR REMARK 3 T11: 1.4222 T22: 1.0016 REMARK 3 T33: 0.9110 T12: 0.0683 REMARK 3 T13: 0.1876 T23: 0.0874 REMARK 3 L TENSOR REMARK 3 L11: 3.2464 L22: 0.4702 REMARK 3 L33: 4.2317 L12: 1.5189 REMARK 3 L13: 1.0569 L23: -0.2586 REMARK 3 S TENSOR REMARK 3 S11: 1.0581 S12: -1.7170 S13: -0.0121 REMARK 3 S21: 0.0779 S22: -0.6865 S23: 0.3759 REMARK 3 S31: 0.7223 S32: 0.5898 S33: -0.2143 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 73 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.7960 19.1355 18.1935 REMARK 3 T TENSOR REMARK 3 T11: 0.9756 T22: 0.8981 REMARK 3 T33: 0.7298 T12: 0.2992 REMARK 3 T13: 0.0083 T23: -0.1283 REMARK 3 L TENSOR REMARK 3 L11: 3.2533 L22: 3.7240 REMARK 3 L33: 6.6419 L12: -0.7994 REMARK 3 L13: 0.5288 L23: -1.0337 REMARK 3 S TENSOR REMARK 3 S11: 1.5396 S12: 0.0292 S13: -0.3389 REMARK 3 S21: -1.1195 S22: -0.4169 S23: -0.0878 REMARK 3 S31: 0.0036 S32: -2.0240 S33: -0.7469 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 94 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.8595 23.5255 22.1186 REMARK 3 T TENSOR REMARK 3 T11: 1.4165 T22: 1.8606 REMARK 3 T33: 1.3519 T12: 0.0609 REMARK 3 T13: 0.1513 T23: -0.2385 REMARK 3 L TENSOR REMARK 3 L11: 8.4738 L22: 5.1094 REMARK 3 L33: 4.1042 L12: -2.2590 REMARK 3 L13: 5.2636 L23: 0.1921 REMARK 3 S TENSOR REMARK 3 S11: 0.0475 S12: -2.1786 S13: 2.7719 REMARK 3 S21: -0.9664 S22: -0.1005 S23: 1.3413 REMARK 3 S31: 0.1826 S32: -4.6068 S33: 0.0742 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'C' AND (RESID 104 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.6868 25.3387 30.4654 REMARK 3 T TENSOR REMARK 3 T11: 1.1078 T22: 1.4486 REMARK 3 T33: 0.7182 T12: 0.2084 REMARK 3 T13: 0.0522 T23: -0.1643 REMARK 3 L TENSOR REMARK 3 L11: 3.7776 L22: 4.9428 REMARK 3 L33: 2.6358 L12: 0.7004 REMARK 3 L13: -0.2883 L23: 0.3695 REMARK 3 S TENSOR REMARK 3 S11: -0.2746 S12: -1.9997 S13: 0.7571 REMARK 3 S21: 1.3095 S22: -0.0965 S23: 0.3822 REMARK 3 S31: -0.1635 S32: -0.8720 S33: 0.2755 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 15 THROUGH 27 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.7765 14.6361 -8.3476 REMARK 3 T TENSOR REMARK 3 T11: 1.0323 T22: 2.1222 REMARK 3 T33: 1.7023 T12: -0.2516 REMARK 3 T13: -0.3580 T23: 0.2346 REMARK 3 L TENSOR REMARK 3 L11: 2.1991 L22: 7.5173 REMARK 3 L33: 3.1302 L12: -0.3448 REMARK 3 L13: -1.3836 L23: 1.8789 REMARK 3 S TENSOR REMARK 3 S11: 0.0415 S12: 2.0993 S13: 1.2777 REMARK 3 S21: 1.2716 S22: -2.0468 S23: -1.0247 REMARK 3 S31: -0.2967 S32: -1.5945 S33: 2.4443 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 28 THROUGH 44 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.0199 21.2238 -5.9179 REMARK 3 T TENSOR REMARK 3 T11: 1.0127 T22: 1.1101 REMARK 3 T33: 0.9761 T12: 0.2789 REMARK 3 T13: 0.0699 T23: -0.0093 REMARK 3 L TENSOR REMARK 3 L11: 4.4506 L22: 3.8557 REMARK 3 L33: 5.8114 L12: -1.9144 REMARK 3 L13: 0.1525 L23: 0.4643 REMARK 3 S TENSOR REMARK 3 S11: 0.4862 S12: 0.2280 S13: 0.0938 REMARK 3 S21: -0.3530 S22: -0.0320 S23: 1.8583 REMARK 3 S31: -1.0889 S32: -1.4441 S33: -0.5933 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 45 THROUGH 72 ) REMARK 3 ORIGIN FOR THE GROUP (A): 27.2633 18.4122 -18.7363 REMARK 3 T TENSOR REMARK 3 T11: 1.6150 T22: 1.6844 REMARK 3 T33: 1.0538 T12: 0.2274 REMARK 3 T13: -0.3442 T23: 0.1161 REMARK 3 L TENSOR REMARK 3 L11: 3.3961 L22: 1.8406 REMARK 3 L33: 4.1473 L12: 1.2222 REMARK 3 L13: 0.7723 L23: -0.1051 REMARK 3 S TENSOR REMARK 3 S11: -0.5637 S12: 2.3068 S13: 0.2844 REMARK 3 S21: -1.5713 S22: 0.6104 S23: 0.9197 REMARK 3 S31: 0.1910 S32: 0.0272 S33: 0.2992 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 73 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 29.9034 13.6781 -3.5411 REMARK 3 T TENSOR REMARK 3 T11: 1.1219 T22: 0.6706 REMARK 3 T33: 0.6492 T12: 0.1848 REMARK 3 T13: 0.0807 T23: -0.0651 REMARK 3 L TENSOR REMARK 3 L11: 3.5342 L22: 3.7083 REMARK 3 L33: 3.7727 L12: -1.4112 REMARK 3 L13: 0.2028 L23: -0.2709 REMARK 3 S TENSOR REMARK 3 S11: -0.9509 S12: -0.7561 S13: 0.4919 REMARK 3 S21: 0.0558 S22: 0.4890 S23: 0.4946 REMARK 3 S31: 0.4026 S32: -0.6633 S33: 0.1344 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 94 THROUGH 116 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.0345 6.3372 -13.1436 REMARK 3 T TENSOR REMARK 3 T11: 2.1627 T22: 1.0609 REMARK 3 T33: 0.2859 T12: -0.3902 REMARK 3 T13: 0.0735 T23: -0.3693 REMARK 3 L TENSOR REMARK 3 L11: 1.5707 L22: 1.4966 REMARK 3 L33: 6.3649 L12: 0.4027 REMARK 3 L13: -1.1481 L23: -1.9546 REMARK 3 S TENSOR REMARK 3 S11: -1.1650 S12: 0.8624 S13: -4.1299 REMARK 3 S21: -3.2784 S22: 1.6248 S23: -0.6257 REMARK 3 S31: 3.7964 S32: -0.2663 S33: 0.0961 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 117 THROUGH 124 ) REMARK 3 ORIGIN FOR THE GROUP (A): 37.1270 16.8611 -14.0207 REMARK 3 T TENSOR REMARK 3 T11: 1.5723 T22: 1.1166 REMARK 3 T33: 1.3677 T12: -0.0998 REMARK 3 T13: 0.1977 T23: -0.0791 REMARK 3 L TENSOR REMARK 3 L11: 2.5216 L22: 1.7885 REMARK 3 L33: 2.9009 L12: 0.0602 REMARK 3 L13: 2.7995 L23: 0.5126 REMARK 3 S TENSOR REMARK 3 S11: 1.2773 S12: 0.2468 S13: -3.6667 REMARK 3 S21: -1.3958 S22: 0.7102 S23: -0.9526 REMARK 3 S31: -1.4042 S32: 1.9815 S33: -2.7733 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'D' AND (RESID 125 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): 30.0997 3.4072 -14.6412 REMARK 3 T TENSOR REMARK 3 T11: 2.1029 T22: 1.4321 REMARK 3 T33: 0.9362 T12: 0.0910 REMARK 3 T13: 0.1402 T23: -0.3934 REMARK 3 L TENSOR REMARK 3 L11: 6.4969 L22: 0.8867 REMARK 3 L33: 2.3356 L12: 1.8911 REMARK 3 L13: -2.9296 L23: -0.7560 REMARK 3 S TENSOR REMARK 3 S11: -0.0312 S12: 1.1238 S13: -1.3629 REMARK 3 S21: -2.5995 S22: -0.1033 S23: 0.8338 REMARK 3 S31: -0.4117 S32: -1.9102 S33: 0.7834 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 1 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): -0.4959 42.0808 -19.2200 REMARK 3 T TENSOR REMARK 3 T11: 0.4141 T22: 1.1224 REMARK 3 T33: 0.9814 T12: 0.0386 REMARK 3 T13: 0.1301 T23: -0.0954 REMARK 3 L TENSOR REMARK 3 L11: 0.7921 L22: 6.4289 REMARK 3 L33: 8.6568 L12: -0.0576 REMARK 3 L13: -0.6724 L23: 0.6004 REMARK 3 S TENSOR REMARK 3 S11: -0.4709 S12: -1.6235 S13: -0.0701 REMARK 3 S21: 0.0654 S22: -0.1241 S23: -0.1457 REMARK 3 S31: -0.1969 S32: -0.1538 S33: 0.3611 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 1 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.5515 42.0742 -22.0102 REMARK 3 T TENSOR REMARK 3 T11: 0.0643 T22: 1.5868 REMARK 3 T33: 0.9320 T12: -0.0987 REMARK 3 T13: 0.0954 T23: 0.1744 REMARK 3 L TENSOR REMARK 3 L11: 3.9582 L22: 6.5185 REMARK 3 L33: 4.6309 L12: -1.8500 REMARK 3 L13: 1.6189 L23: 0.4894 REMARK 3 S TENSOR REMARK 3 S11: -0.6947 S12: 3.5066 S13: 0.8521 REMARK 3 S21: -0.1198 S22: 0.0660 S23: -0.3230 REMARK 3 S31: -0.0280 S32: -0.4889 S33: 0.1295 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'G' AND (RESID 1 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.2163 21.5154 8.7174 REMARK 3 T TENSOR REMARK 3 T11: 0.9524 T22: 0.5522 REMARK 3 T33: 0.9174 T12: 0.2760 REMARK 3 T13: 0.0091 T23: -0.0985 REMARK 3 L TENSOR REMARK 3 L11: 6.6884 L22: 3.0907 REMARK 3 L33: 7.5350 L12: 4.2091 REMARK 3 L13: 1.3641 L23: -0.5257 REMARK 3 S TENSOR REMARK 3 S11: -0.4859 S12: -0.0492 S13: 0.5119 REMARK 3 S21: 1.2350 S22: 0.1427 S23: -0.5518 REMARK 3 S31: -0.1174 S32: 0.3598 S33: 0.2648 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'H' AND (RESID 1 THROUGH 14 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.8011 20.6493 5.8640 REMARK 3 T TENSOR REMARK 3 T11: 0.8922 T22: 0.5889 REMARK 3 T33: 0.8570 T12: 0.3190 REMARK 3 T13: 0.1614 T23: 0.0488 REMARK 3 L TENSOR REMARK 3 L11: 5.1805 L22: 3.4273 REMARK 3 L33: 7.5738 L12: 5.1657 REMARK 3 L13: 0.5520 L23: 0.8393 REMARK 3 S TENSOR REMARK 3 S11: 0.4724 S12: 0.7304 S13: 0.1007 REMARK 3 S21: -1.0303 S22: -0.5921 S23: -1.0611 REMARK 3 S31: -0.0361 S32: -0.0268 S33: -0.0082 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZL2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000209414. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14807 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.050 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.4 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.07800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.59600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1OZJ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.39 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS, PH 7.0, 12% PEG 3350, 0.2M REMARK 280 KNO3, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 294K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 27.86867 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 55.73733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3910 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16960 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D, G, H REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 SER A 3 REMARK 465 MET A 4 REMARK 465 ALA A 5 REMARK 465 SER A 6 REMARK 465 LEU A 7 REMARK 465 PHE A 8 REMARK 465 SER A 9 REMARK 465 PHE A 10 REMARK 465 THR A 11 REMARK 465 SER A 12 REMARK 465 PRO A 13 REMARK 465 ALA A 14 REMARK 465 LYS A 22 REMARK 465 GLN A 23 REMARK 465 GLY A 24 REMARK 465 ASP A 25 REMARK 465 PRO A 134 REMARK 465 VAL A 135 REMARK 465 LEU A 136 REMARK 465 PRO A 137 REMARK 465 PRO A 138 REMARK 465 VAL A 139 REMARK 465 LEU A 140 REMARK 465 VAL A 141 REMARK 465 PRO A 142 REMARK 465 ARG A 143 REMARK 465 LEU A 144 REMARK 465 GLU A 145 REMARK 465 HIS A 146 REMARK 465 HIS A 147 REMARK 465 HIS A 148 REMARK 465 HIS A 149 REMARK 465 HIS A 150 REMARK 465 HIS A 151 REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 SER B 3 REMARK 465 MET B 4 REMARK 465 ALA B 5 REMARK 465 SER B 6 REMARK 465 LEU B 7 REMARK 465 PHE B 8 REMARK 465 SER B 9 REMARK 465 PHE B 10 REMARK 465 THR B 11 REMARK 465 SER B 12 REMARK 465 GLN B 23 REMARK 465 GLY B 24 REMARK 465 ASP B 25 REMARK 465 PRO B 134 REMARK 465 VAL B 135 REMARK 465 LEU B 136 REMARK 465 PRO B 137 REMARK 465 PRO B 138 REMARK 465 VAL B 139 REMARK 465 LEU B 140 REMARK 465 VAL B 141 REMARK 465 PRO B 142 REMARK 465 ARG B 143 REMARK 465 LEU B 144 REMARK 465 GLU B 145 REMARK 465 HIS B 146 REMARK 465 HIS B 147 REMARK 465 HIS B 148 REMARK 465 HIS B 149 REMARK 465 HIS B 150 REMARK 465 HIS B 151 REMARK 465 MET C 1 REMARK 465 THR C 2 REMARK 465 SER C 3 REMARK 465 MET C 4 REMARK 465 ALA C 5 REMARK 465 SER C 6 REMARK 465 LEU C 7 REMARK 465 PHE C 8 REMARK 465 SER C 9 REMARK 465 PHE C 10 REMARK 465 THR C 11 REMARK 465 SER C 12 REMARK 465 GLN C 23 REMARK 465 GLY C 24 REMARK 465 ASP C 25 REMARK 465 PRO C 134 REMARK 465 VAL C 135 REMARK 465 LEU C 136 REMARK 465 PRO C 137 REMARK 465 PRO C 138 REMARK 465 VAL C 139 REMARK 465 LEU C 140 REMARK 465 VAL C 141 REMARK 465 PRO C 142 REMARK 465 ARG C 143 REMARK 465 LEU C 144 REMARK 465 GLU C 145 REMARK 465 HIS C 146 REMARK 465 HIS C 147 REMARK 465 HIS C 148 REMARK 465 HIS C 149 REMARK 465 HIS C 150 REMARK 465 HIS C 151 REMARK 465 MET D 1 REMARK 465 THR D 2 REMARK 465 SER D 3 REMARK 465 MET D 4 REMARK 465 ALA D 5 REMARK 465 SER D 6 REMARK 465 LEU D 7 REMARK 465 PHE D 8 REMARK 465 SER D 9 REMARK 465 PHE D 10 REMARK 465 THR D 11 REMARK 465 SER D 12 REMARK 465 PRO D 13 REMARK 465 ALA D 14 REMARK 465 GLN D 23 REMARK 465 GLY D 24 REMARK 465 ASP D 25 REMARK 465 PRO D 134 REMARK 465 VAL D 135 REMARK 465 LEU D 136 REMARK 465 PRO D 137 REMARK 465 PRO D 138 REMARK 465 VAL D 139 REMARK 465 LEU D 140 REMARK 465 VAL D 141 REMARK 465 PRO D 142 REMARK 465 ARG D 143 REMARK 465 LEU D 144 REMARK 465 GLU D 145 REMARK 465 HIS D 146 REMARK 465 HIS D 147 REMARK 465 HIS D 148 REMARK 465 HIS D 149 REMARK 465 HIS D 150 REMARK 465 HIS D 151 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 DC G 10 O3' DC G 10 C3' -0.040 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO D 113 C - N - CA ANGL. DEV. = 9.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 79 50.49 39.87 REMARK 500 HIS A 80 -35.92 75.32 REMARK 500 PRO A 96 4.89 -65.54 REMARK 500 GLN A 99 -126.54 61.41 REMARK 500 GLU A 120 92.81 64.81 REMARK 500 HIS B 80 -36.17 73.70 REMARK 500 PRO B 96 7.09 -65.91 REMARK 500 GLN B 99 -126.89 61.94 REMARK 500 GLU B 120 93.91 63.54 REMARK 500 HIS C 80 -34.51 74.63 REMARK 500 PRO C 96 7.92 -65.29 REMARK 500 GLN C 99 -132.45 59.66 REMARK 500 GLU C 120 92.54 66.52 REMARK 500 SER D 79 52.05 39.09 REMARK 500 HIS D 80 -36.62 75.34 REMARK 500 PRO D 96 6.07 -64.45 REMARK 500 GLN D 99 -128.08 59.72 REMARK 500 GLU D 120 93.03 63.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 65 SG REMARK 620 2 CYS A 110 SG 100.0 REMARK 620 3 CYS A 122 SG 110.7 102.2 REMARK 620 4 HIS A 127 ND1 138.7 111.5 88.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 65 SG REMARK 620 2 CYS B 110 SG 99.9 REMARK 620 3 CYS B 122 SG 120.1 109.6 REMARK 620 4 HIS B 127 ND1 123.0 107.2 96.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS C 65 SG REMARK 620 2 CYS C 110 SG 101.3 REMARK 620 3 CYS C 122 SG 111.4 100.1 REMARK 620 4 HIS C 127 ND1 140.2 109.0 88.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS D 65 SG REMARK 620 2 CYS D 110 SG 103.5 REMARK 620 3 CYS D 122 SG 123.9 111.1 REMARK 620 4 HIS D 127 ND1 117.6 105.6 94.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN C 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN D 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ZL3 RELATED DB: PDB DBREF 4ZL2 A 1 143 UNP P97454 SMAD5_MOUSE 1 143 DBREF 4ZL2 B 1 143 UNP P97454 SMAD5_MOUSE 1 143 DBREF 4ZL2 C 1 143 UNP P97454 SMAD5_MOUSE 1 143 DBREF 4ZL2 D 1 143 UNP P97454 SMAD5_MOUSE 1 143 DBREF 4ZL2 E 1 14 PDB 4ZL2 4ZL2 1 14 DBREF 4ZL2 F 1 14 PDB 4ZL2 4ZL2 1 14 DBREF 4ZL2 G 1 14 PDB 4ZL2 4ZL2 1 14 DBREF 4ZL2 H 1 14 PDB 4ZL2 4ZL2 1 14 SEQADV 4ZL2 LEU A 144 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 GLU A 145 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS A 146 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS A 147 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS A 148 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS A 149 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS A 150 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS A 151 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 LEU B 144 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 GLU B 145 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS B 146 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS B 147 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS B 148 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS B 149 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS B 150 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS B 151 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 LEU C 144 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 GLU C 145 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS C 146 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS C 147 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS C 148 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS C 149 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS C 150 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS C 151 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 LEU D 144 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 GLU D 145 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS D 146 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS D 147 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS D 148 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS D 149 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS D 150 UNP P97454 EXPRESSION TAG SEQADV 4ZL2 HIS D 151 UNP P97454 EXPRESSION TAG SEQRES 1 A 151 MET THR SER MET ALA SER LEU PHE SER PHE THR SER PRO SEQRES 2 A 151 ALA VAL LYS ARG LEU LEU GLY TRP LYS GLN GLY ASP GLU SEQRES 3 A 151 GLU GLU LYS TRP ALA GLU LYS ALA VAL ASP ALA LEU VAL SEQRES 4 A 151 LYS LYS LEU LYS LYS LYS LYS GLY ALA MET GLU GLU LEU SEQRES 5 A 151 GLU LYS ALA LEU SER SER PRO GLY GLN PRO SER LYS CYS SEQRES 6 A 151 VAL THR ILE PRO ARG SER LEU ASP GLY ARG LEU GLN VAL SEQRES 7 A 151 SER HIS ARG LYS GLY LEU PRO HIS VAL ILE TYR CYS ARG SEQRES 8 A 151 VAL TRP ARG TRP PRO ASP LEU GLN SER HIS HIS GLU LEU SEQRES 9 A 151 LYS PRO LEU ASP ILE CYS GLU PHE PRO PHE GLY SER LYS SEQRES 10 A 151 GLN LYS GLU VAL CYS ILE ASN PRO TYR HIS TYR LYS ARG SEQRES 11 A 151 VAL GLU SER PRO VAL LEU PRO PRO VAL LEU VAL PRO ARG SEQRES 12 A 151 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 151 MET THR SER MET ALA SER LEU PHE SER PHE THR SER PRO SEQRES 2 B 151 ALA VAL LYS ARG LEU LEU GLY TRP LYS GLN GLY ASP GLU SEQRES 3 B 151 GLU GLU LYS TRP ALA GLU LYS ALA VAL ASP ALA LEU VAL SEQRES 4 B 151 LYS LYS LEU LYS LYS LYS LYS GLY ALA MET GLU GLU LEU SEQRES 5 B 151 GLU LYS ALA LEU SER SER PRO GLY GLN PRO SER LYS CYS SEQRES 6 B 151 VAL THR ILE PRO ARG SER LEU ASP GLY ARG LEU GLN VAL SEQRES 7 B 151 SER HIS ARG LYS GLY LEU PRO HIS VAL ILE TYR CYS ARG SEQRES 8 B 151 VAL TRP ARG TRP PRO ASP LEU GLN SER HIS HIS GLU LEU SEQRES 9 B 151 LYS PRO LEU ASP ILE CYS GLU PHE PRO PHE GLY SER LYS SEQRES 10 B 151 GLN LYS GLU VAL CYS ILE ASN PRO TYR HIS TYR LYS ARG SEQRES 11 B 151 VAL GLU SER PRO VAL LEU PRO PRO VAL LEU VAL PRO ARG SEQRES 12 B 151 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 151 MET THR SER MET ALA SER LEU PHE SER PHE THR SER PRO SEQRES 2 C 151 ALA VAL LYS ARG LEU LEU GLY TRP LYS GLN GLY ASP GLU SEQRES 3 C 151 GLU GLU LYS TRP ALA GLU LYS ALA VAL ASP ALA LEU VAL SEQRES 4 C 151 LYS LYS LEU LYS LYS LYS LYS GLY ALA MET GLU GLU LEU SEQRES 5 C 151 GLU LYS ALA LEU SER SER PRO GLY GLN PRO SER LYS CYS SEQRES 6 C 151 VAL THR ILE PRO ARG SER LEU ASP GLY ARG LEU GLN VAL SEQRES 7 C 151 SER HIS ARG LYS GLY LEU PRO HIS VAL ILE TYR CYS ARG SEQRES 8 C 151 VAL TRP ARG TRP PRO ASP LEU GLN SER HIS HIS GLU LEU SEQRES 9 C 151 LYS PRO LEU ASP ILE CYS GLU PHE PRO PHE GLY SER LYS SEQRES 10 C 151 GLN LYS GLU VAL CYS ILE ASN PRO TYR HIS TYR LYS ARG SEQRES 11 C 151 VAL GLU SER PRO VAL LEU PRO PRO VAL LEU VAL PRO ARG SEQRES 12 C 151 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 D 151 MET THR SER MET ALA SER LEU PHE SER PHE THR SER PRO SEQRES 2 D 151 ALA VAL LYS ARG LEU LEU GLY TRP LYS GLN GLY ASP GLU SEQRES 3 D 151 GLU GLU LYS TRP ALA GLU LYS ALA VAL ASP ALA LEU VAL SEQRES 4 D 151 LYS LYS LEU LYS LYS LYS LYS GLY ALA MET GLU GLU LEU SEQRES 5 D 151 GLU LYS ALA LEU SER SER PRO GLY GLN PRO SER LYS CYS SEQRES 6 D 151 VAL THR ILE PRO ARG SER LEU ASP GLY ARG LEU GLN VAL SEQRES 7 D 151 SER HIS ARG LYS GLY LEU PRO HIS VAL ILE TYR CYS ARG SEQRES 8 D 151 VAL TRP ARG TRP PRO ASP LEU GLN SER HIS HIS GLU LEU SEQRES 9 D 151 LYS PRO LEU ASP ILE CYS GLU PHE PRO PHE GLY SER LYS SEQRES 10 D 151 GLN LYS GLU VAL CYS ILE ASN PRO TYR HIS TYR LYS ARG SEQRES 11 D 151 VAL GLU SER PRO VAL LEU PRO PRO VAL LEU VAL PRO ARG SEQRES 12 D 151 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 E 14 DG DT DA DT DG DG DC DG DC DC DA DT DA SEQRES 2 E 14 DC SEQRES 1 F 14 DG DT DA DT DG DG DC DG DC DC DA DT DA SEQRES 2 F 14 DC SEQRES 1 G 14 DG DT DA DT DG DG DC DG DC DC DA DT DA SEQRES 2 G 14 DC SEQRES 1 H 14 DG DT DA DT DG DG DC DG DC DC DA DT DA SEQRES 2 H 14 DC HET ZN A 201 1 HET ZN B 201 1 HET ZN C 201 1 HET ZN D 201 1 HETNAM ZN ZINC ION FORMUL 9 ZN 4(ZN 2+) HELIX 1 AA1 VAL A 15 GLY A 20 1 6 HELIX 2 AA2 GLU A 27 LYS A 43 1 17 HELIX 3 AA3 LYS A 45 SER A 58 1 14 HELIX 4 AA4 LEU A 84 ARG A 94 1 11 HELIX 5 AA5 SER A 100 HIS A 102 5 3 HELIX 6 AA6 ASN A 124 TYR A 126 5 3 HELIX 7 AA7 ALA B 14 GLY B 20 1 7 HELIX 8 AA8 GLU B 27 LYS B 43 1 17 HELIX 9 AA9 LYS B 45 SER B 58 1 14 HELIX 10 AB1 LEU B 84 ARG B 94 1 11 HELIX 11 AB2 SER B 100 HIS B 102 5 3 HELIX 12 AB3 ASN B 124 TYR B 126 5 3 HELIX 13 AB4 ALA C 14 GLY C 20 1 7 HELIX 14 AB5 GLU C 27 LYS C 43 1 17 HELIX 15 AB6 LYS C 45 SER C 58 1 14 HELIX 16 AB7 LEU C 84 ARG C 94 1 11 HELIX 17 AB8 SER C 100 HIS C 102 5 3 HELIX 18 AB9 ASN C 124 TYR C 126 5 3 HELIX 19 AC1 LYS D 16 TRP D 21 1 6 HELIX 20 AC2 GLU D 27 LYS D 43 1 17 HELIX 21 AC3 LYS D 45 SER D 58 1 14 HELIX 22 AC4 LEU D 84 ARG D 94 1 11 HELIX 23 AC5 SER D 100 HIS D 102 5 3 HELIX 24 AC6 ASN D 124 TYR D 126 5 3 SHEET 1 AA1 2 THR A 67 ILE A 68 0 SHEET 2 AA1 2 VAL A 121 CYS A 122 -1 O VAL A 121 N ILE A 68 SHEET 1 AA2 2 LEU A 76 VAL A 78 0 SHEET 2 AA2 2 ARG A 81 GLY A 83 -1 O ARG A 81 N VAL A 78 SHEET 1 AA3 2 LEU A 104 PRO A 106 0 SHEET 2 AA3 2 TYR A 128 ARG A 130 -1 O LYS A 129 N LYS A 105 SHEET 1 AA4 2 THR B 67 ILE B 68 0 SHEET 2 AA4 2 VAL B 121 CYS B 122 -1 O VAL B 121 N ILE B 68 SHEET 1 AA5 2 LEU B 76 VAL B 78 0 SHEET 2 AA5 2 ARG B 81 GLY B 83 -1 O ARG B 81 N VAL B 78 SHEET 1 AA6 2 LEU B 104 PRO B 106 0 SHEET 2 AA6 2 TYR B 128 ARG B 130 -1 O LYS B 129 N LYS B 105 SHEET 1 AA7 2 THR C 67 ILE C 68 0 SHEET 2 AA7 2 VAL C 121 CYS C 122 -1 O VAL C 121 N ILE C 68 SHEET 1 AA8 2 LEU C 76 VAL C 78 0 SHEET 2 AA8 2 ARG C 81 GLY C 83 -1 O ARG C 81 N VAL C 78 SHEET 1 AA9 2 LEU C 104 PRO C 106 0 SHEET 2 AA9 2 TYR C 128 ARG C 130 -1 O LYS C 129 N LYS C 105 SHEET 1 AB1 2 THR D 67 ILE D 68 0 SHEET 2 AB1 2 VAL D 121 CYS D 122 -1 O VAL D 121 N ILE D 68 SHEET 1 AB2 2 LEU D 76 VAL D 78 0 SHEET 2 AB2 2 ARG D 81 GLY D 83 -1 O ARG D 81 N VAL D 78 SHEET 1 AB3 2 LEU D 104 PRO D 106 0 SHEET 2 AB3 2 TYR D 128 ARG D 130 -1 O LYS D 129 N LYS D 105 LINK SG CYS A 65 ZN ZN A 201 1555 1555 2.24 LINK SG CYS A 110 ZN ZN A 201 1555 1555 2.27 LINK SG CYS A 122 ZN ZN A 201 1555 1555 2.34 LINK ND1 HIS A 127 ZN ZN A 201 1555 1555 1.91 LINK SG CYS B 65 ZN ZN B 201 1555 1555 2.33 LINK SG CYS B 110 ZN ZN B 201 1555 1555 2.40 LINK SG CYS B 122 ZN ZN B 201 1555 1555 2.26 LINK ND1 HIS B 127 ZN ZN B 201 1555 1555 2.06 LINK SG CYS C 65 ZN ZN C 201 1555 1555 2.22 LINK SG CYS C 110 ZN ZN C 201 1555 1555 2.27 LINK SG CYS C 122 ZN ZN C 201 1555 1555 2.31 LINK ND1 HIS C 127 ZN ZN C 201 1555 1555 1.91 LINK SG CYS D 65 ZN ZN D 201 1555 1555 2.51 LINK SG CYS D 110 ZN ZN D 201 1555 1555 2.38 LINK SG CYS D 122 ZN ZN D 201 1555 1555 2.21 LINK ND1 HIS D 127 ZN ZN D 201 1555 1555 2.17 SITE 1 AC1 4 CYS A 65 CYS A 110 CYS A 122 HIS A 127 SITE 1 AC2 4 CYS B 65 CYS B 110 CYS B 122 HIS B 127 SITE 1 AC3 4 CYS C 65 CYS C 110 CYS C 122 HIS C 127 SITE 1 AC4 4 CYS D 65 CYS D 110 CYS D 122 HIS D 127 CRYST1 92.728 92.728 83.606 90.00 90.00 120.00 P 31 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010784 0.006226 0.000000 0.00000 SCALE2 0.000000 0.012453 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011961 0.00000