HEADER METAL BINDING PROTEIN/DNA 01-MAY-15 4ZL3 OBSLTE 15-MAR-17 4ZL3 5X6M TITLE CRYSTAL STRUCTURE OF SMAD5-MH1 IN COMPLEX WITH A COMPOSITE DNA TITLE 2 SEQUENCE COMPND MOL_ID: 1; COMPND 2 MOLECULE: MOTHERS AGAINST DECAPENTAPLEGIC HOMOLOG 5; COMPND 3 CHAIN: B, A, E, F; COMPND 4 FRAGMENT: MH1 DOMAIN (UNP RESIDUES 1-143); COMPND 5 SYNONYM: MOTHERS AGAINST DPP HOMOLOG 5,DWARFIN-C,DWF-C,SMAD FAMILY COMPND 6 MEMBER 5,MSMAD5; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: DNA (5'- COMPND 10 D(P*AP*TP*CP*AP*GP*AP*CP*TP*GP*CP*CP*GP*GP*CP*AP*GP*TP*CP*TP*AP*TP*A) COMPND 11 -3'); COMPND 12 CHAIN: C, G; COMPND 13 SYNONYM: GCRJ2 DNA5; COMPND 14 ENGINEERED: YES; COMPND 15 MOL_ID: 3; COMPND 16 MOLECULE: DNA (5'- COMPND 17 D(P*TP*TP*AP*TP*AP*GP*AP*CP*TP*GP*CP*CP*GP*GP*CP*AP*GP*TP*CP*TP*GP*A) COMPND 18 -3'); COMPND 19 CHAIN: D, H; COMPND 20 SYNONYM: GCRJ2 DNA3; COMPND 21 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: SMAD5, MADH5, MSMAD5; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET21B; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 14 ORGANISM_TAXID: 32630; SOURCE 15 MOL_ID: 3; SOURCE 16 SYNTHETIC: YES; SOURCE 17 ORGANISM_SCIENTIFIC: SYNTHETIC CONSTRUCT; SOURCE 18 ORGANISM_TAXID: 32630 KEYWDS SMAD5, MH1 DOMAIN, COMPOSITE DNA, SBE, GC-RICH, METAL BINDING KEYWDS 2 PROTEIN-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR N.CHAI,J.WANG,Z.X.WANG,J.W.WU REVDAT 3 15-MAR-17 4ZL3 1 OBSLTE REVDAT 2 28-OCT-15 4ZL3 1 JRNL REVDAT 1 02-SEP-15 4ZL3 0 JRNL AUTH N.CHAI,W.X.LI,J.WANG,Z.X.WANG,S.M.YANG,J.W.WU JRNL TITL STRUCTURAL BASIS FOR THE SMAD5 MH1 DOMAIN TO RECOGNIZE JRNL TITL 2 DIFFERENT DNA SEQUENCES. JRNL REF NUCLEIC ACIDS RES. V. 43 9051 2015 JRNL REFN ESSN 1362-4962 JRNL PMID 26304548 JRNL DOI 10.1093/NAR/GKV848 REMARK 2 REMARK 2 RESOLUTION. 3.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.4_1496 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.94 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 24192 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.247 REMARK 3 R VALUE (WORKING SET) : 0.245 REMARK 3 FREE R VALUE : 0.289 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.110 REMARK 3 FREE R VALUE TEST SET COUNT : 1236 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.9383 - 6.6290 0.90 2337 104 0.1911 0.2213 REMARK 3 2 6.6290 - 5.2710 1.00 2584 147 0.2583 0.2884 REMARK 3 3 5.2710 - 4.6074 1.00 2589 133 0.2578 0.2762 REMARK 3 4 4.6074 - 4.1874 1.00 2561 171 0.2567 0.3389 REMARK 3 5 4.1874 - 3.8879 1.00 2582 136 0.2901 0.3505 REMARK 3 6 3.8879 - 3.6591 1.00 2591 139 0.3177 0.3462 REMARK 3 7 3.6591 - 3.4762 1.00 2598 135 0.3150 0.3676 REMARK 3 8 3.4762 - 3.3250 1.00 2550 148 0.2776 0.3413 REMARK 3 9 3.3250 - 3.1972 0.99 2564 123 0.2505 0.2927 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.490 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.610 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.005 6064 REMARK 3 ANGLE : 0.913 8544 REMARK 3 CHIRALITY : 0.041 912 REMARK 3 PLANARITY : 0.005 772 REMARK 3 DIHEDRAL : 21.023 2460 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 31 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 13 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 97.9415-117.9907 15.8539 REMARK 3 T TENSOR REMARK 3 T11: 0.7825 T22: 0.5474 REMARK 3 T33: 0.6100 T12: 0.2804 REMARK 3 T13: -0.3524 T23: -0.0600 REMARK 3 L TENSOR REMARK 3 L11: 0.6360 L22: 0.0247 REMARK 3 L33: 0.8640 L12: 0.1109 REMARK 3 L13: -0.5134 L23: 0.0582 REMARK 3 S TENSOR REMARK 3 S11: -0.3574 S12: 0.0328 S13: 0.2628 REMARK 3 S21: 0.1083 S22: -0.3167 S23: -0.3780 REMARK 3 S31: 0.2124 S32: 0.3063 S33: -1.1707 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 43 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 95.6718 -97.8367 18.1313 REMARK 3 T TENSOR REMARK 3 T11: 1.2915 T22: 0.4808 REMARK 3 T33: 0.7057 T12: 0.3058 REMARK 3 T13: -0.6946 T23: -0.8249 REMARK 3 L TENSOR REMARK 3 L11: 0.3517 L22: 0.4537 REMARK 3 L33: 0.2474 L12: 0.0458 REMARK 3 L13: -0.2061 L23: 0.2547 REMARK 3 S TENSOR REMARK 3 S11: -0.4385 S12: -0.1041 S13: 0.2970 REMARK 3 S21: 0.3158 S22: 0.0013 S23: 0.2866 REMARK 3 S31: -0.0799 S32: -0.1096 S33: -0.5547 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 77 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 93.7149-106.0724 6.0301 REMARK 3 T TENSOR REMARK 3 T11: 0.6554 T22: 0.5104 REMARK 3 T33: 0.6172 T12: 0.6222 REMARK 3 T13: -0.5846 T23: -0.0980 REMARK 3 L TENSOR REMARK 3 L11: 0.0931 L22: 0.2107 REMARK 3 L33: 0.5747 L12: -0.0217 REMARK 3 L13: 0.2156 L23: -0.0174 REMARK 3 S TENSOR REMARK 3 S11: -0.1857 S12: -0.0051 S13: 0.1927 REMARK 3 S21: 0.1645 S22: 0.0255 S23: -0.1902 REMARK 3 S31: -0.2744 S32: 0.5515 S33: 0.0473 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 104 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): 90.4494 -91.4339 8.8488 REMARK 3 T TENSOR REMARK 3 T11: 1.8635 T22: 0.9883 REMARK 3 T33: 1.4477 T12: 0.5965 REMARK 3 T13: -0.0308 T23: -0.8456 REMARK 3 L TENSOR REMARK 3 L11: 0.1750 L22: 0.0131 REMARK 3 L33: 0.1143 L12: 0.0033 REMARK 3 L13: 0.1375 L23: 0.0209 REMARK 3 S TENSOR REMARK 3 S11: 0.0620 S12: -0.1403 S13: -0.0529 REMARK 3 S21: -0.0804 S22: -0.1275 S23: -0.1362 REMARK 3 S31: 0.1576 S32: -0.0253 S33: -0.0306 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 122 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): 85.6451-100.2956 9.4350 REMARK 3 T TENSOR REMARK 3 T11: 0.9011 T22: 0.0181 REMARK 3 T33: 1.0518 T12: 1.1914 REMARK 3 T13: -0.3015 T23: -0.9677 REMARK 3 L TENSOR REMARK 3 L11: -0.0080 L22: 0.0251 REMARK 3 L33: -0.0042 L12: -0.0012 REMARK 3 L13: 0.0054 L23: -0.0053 REMARK 3 S TENSOR REMARK 3 S11: -0.1302 S12: -0.0558 S13: -0.1851 REMARK 3 S21: 0.0099 S22: 0.1291 S23: 0.2297 REMARK 3 S31: 0.0123 S32: 0.0337 S33: 0.0669 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 13 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 81.0661-121.5085 -43.7284 REMARK 3 T TENSOR REMARK 3 T11: 0.9171 T22: 1.4131 REMARK 3 T33: 0.6733 T12: -0.1147 REMARK 3 T13: 0.1635 T23: 0.1406 REMARK 3 L TENSOR REMARK 3 L11: -0.0007 L22: 0.0080 REMARK 3 L33: 0.0218 L12: 0.0121 REMARK 3 L13: 0.0018 L23: 0.0106 REMARK 3 S TENSOR REMARK 3 S11: -0.5958 S12: -0.1820 S13: -0.0225 REMARK 3 S21: -0.1893 S22: -0.0782 S23: -0.1215 REMARK 3 S31: -0.1419 S32: -0.1902 S33: -0.0005 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 26 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 92.8252-105.0208 -37.6038 REMARK 3 T TENSOR REMARK 3 T11: 0.4930 T22: 1.0290 REMARK 3 T33: 0.5975 T12: -0.1453 REMARK 3 T13: -0.1744 T23: 0.2885 REMARK 3 L TENSOR REMARK 3 L11: 0.2698 L22: 0.3163 REMARK 3 L33: 0.4787 L12: -0.2250 REMARK 3 L13: -0.3417 L23: 0.3519 REMARK 3 S TENSOR REMARK 3 S11: -0.1669 S12: 0.0542 S13: 0.0891 REMARK 3 S21: -0.0135 S22: -0.3876 S23: 0.0468 REMARK 3 S31: 0.1151 S32: -0.1516 S33: -0.0892 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 43 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 104.1328 -98.8091 -49.0056 REMARK 3 T TENSOR REMARK 3 T11: 2.0599 T22: 2.0542 REMARK 3 T33: 1.5458 T12: -0.4875 REMARK 3 T13: -0.0235 T23: 0.2662 REMARK 3 L TENSOR REMARK 3 L11: 0.0015 L22: -0.0012 REMARK 3 L33: 0.0006 L12: 0.0009 REMARK 3 L13: 0.0021 L23: 0.0016 REMARK 3 S TENSOR REMARK 3 S11: -0.0568 S12: -0.0113 S13: -0.0385 REMARK 3 S21: -0.0814 S22: -0.0493 S23: 0.0543 REMARK 3 S31: 0.0472 S32: -0.0517 S33: -0.0001 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 51 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 109.3177-110.9817 -46.2599 REMARK 3 T TENSOR REMARK 3 T11: 0.4405 T22: 2.0101 REMARK 3 T33: 1.3123 T12: 0.2565 REMARK 3 T13: 0.6501 T23: 0.2959 REMARK 3 L TENSOR REMARK 3 L11: 0.0001 L22: 0.0059 REMARK 3 L33: 0.0153 L12: 0.0056 REMARK 3 L13: 0.0019 L23: 0.0175 REMARK 3 S TENSOR REMARK 3 S11: -0.0610 S12: 0.2073 S13: 0.1814 REMARK 3 S21: -0.0661 S22: -0.0519 S23: -0.1648 REMARK 3 S31: 0.0559 S32: -0.0877 S33: -0.0131 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 67 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 104.4456 -97.1205 -30.1853 REMARK 3 T TENSOR REMARK 3 T11: 0.7787 T22: 0.7930 REMARK 3 T33: 0.9735 T12: -0.6366 REMARK 3 T13: -0.1486 T23: 0.8312 REMARK 3 L TENSOR REMARK 3 L11: 0.0798 L22: 0.1236 REMARK 3 L33: 0.0017 L12: -0.1008 REMARK 3 L13: 0.0080 L23: -0.0024 REMARK 3 S TENSOR REMARK 3 S11: -0.2240 S12: -0.0434 S13: -0.0199 REMARK 3 S21: 0.1871 S22: -0.0227 S23: -0.0616 REMARK 3 S31: 0.0899 S32: 0.0001 S33: -0.1007 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 77 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 98.0288-106.0487 -31.7431 REMARK 3 T TENSOR REMARK 3 T11: 0.3357 T22: 1.0321 REMARK 3 T33: 0.7563 T12: 0.0354 REMARK 3 T13: 0.0049 T23: 0.3724 REMARK 3 L TENSOR REMARK 3 L11: 0.4496 L22: 0.0052 REMARK 3 L33: 0.3021 L12: 0.0327 REMARK 3 L13: 0.3653 L23: 0.0207 REMARK 3 S TENSOR REMARK 3 S11: -0.2446 S12: -0.0847 S13: 0.3733 REMARK 3 S21: -0.1116 S22: -0.3189 S23: -0.2388 REMARK 3 S31: -0.0964 S32: 0.2461 S33: -0.2576 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 94 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 103.4779-115.2671 -28.1657 REMARK 3 T TENSOR REMARK 3 T11: 0.4762 T22: 1.1819 REMARK 3 T33: 0.8142 T12: -0.0212 REMARK 3 T13: 0.0389 T23: 0.1087 REMARK 3 L TENSOR REMARK 3 L11: 0.0202 L22: 0.0060 REMARK 3 L33: 0.0147 L12: -0.0182 REMARK 3 L13: 0.0054 L23: 0.0008 REMARK 3 S TENSOR REMARK 3 S11: 0.1072 S12: 0.1279 S13: -0.2317 REMARK 3 S21: 0.3153 S22: -0.0524 S23: -0.0278 REMARK 3 S31: 0.0125 S32: 0.3193 S33: -0.0003 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 104 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 116.0117-109.7910 -33.7090 REMARK 3 T TENSOR REMARK 3 T11: 0.9049 T22: 1.8636 REMARK 3 T33: 1.5605 T12: -0.1087 REMARK 3 T13: 0.3102 T23: 0.3497 REMARK 3 L TENSOR REMARK 3 L11: 0.0070 L22: 0.0127 REMARK 3 L33: 0.0131 L12: -0.0085 REMARK 3 L13: 0.0081 L23: -0.0180 REMARK 3 S TENSOR REMARK 3 S11: 0.2288 S12: -0.2364 S13: -0.2819 REMARK 3 S21: -0.2725 S22: 0.2658 S23: 0.3024 REMARK 3 S31: -0.1135 S32: -0.1168 S33: -0.0010 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 112 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): 112.8007-100.1588 -30.7436 REMARK 3 T TENSOR REMARK 3 T11: 1.0321 T22: 2.0471 REMARK 3 T33: 2.0974 T12: -0.3307 REMARK 3 T13: -0.1996 T23: 0.0254 REMARK 3 L TENSOR REMARK 3 L11: 0.0048 L22: 0.0061 REMARK 3 L33: 0.0057 L12: -0.0081 REMARK 3 L13: 0.0075 L23: -0.0052 REMARK 3 S TENSOR REMARK 3 S11: -0.1985 S12: 0.0423 S13: -0.0567 REMARK 3 S21: 0.0965 S22: -0.0484 S23: 0.1132 REMARK 3 S31: 0.0968 S32: -0.0482 S33: -0.0000 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 122 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): 109.2346-113.3313 -33.3316 REMARK 3 T TENSOR REMARK 3 T11: 0.1933 T22: 1.9390 REMARK 3 T33: 1.2348 T12: 0.2475 REMARK 3 T13: 0.3627 T23: 0.4832 REMARK 3 L TENSOR REMARK 3 L11: 0.2895 L22: 0.1821 REMARK 3 L33: 0.2917 L12: 0.1334 REMARK 3 L13: 0.2284 L23: -0.0109 REMARK 3 S TENSOR REMARK 3 S11: 0.3612 S12: 0.2155 S13: -0.2956 REMARK 3 S21: -0.0580 S22: -0.0055 S23: 0.0323 REMARK 3 S31: -0.0193 S32: -0.1055 S33: 0.3663 REMARK 3 TLS GROUP : 16 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 13 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 93.3049-112.7413 20.1678 REMARK 3 T TENSOR REMARK 3 T11: 1.7864 T22: 0.6700 REMARK 3 T33: 0.9970 T12: 0.4285 REMARK 3 T13: -0.3555 T23: -0.1845 REMARK 3 L TENSOR REMARK 3 L11: 0.0375 L22: 0.0308 REMARK 3 L33: 0.5601 L12: 0.0346 REMARK 3 L13: -0.0321 L23: 0.0190 REMARK 3 S TENSOR REMARK 3 S11: -0.3019 S12: 0.0631 S13: -0.0555 REMARK 3 S21: -0.1602 S22: -0.2822 S23: -0.0199 REMARK 3 S31: -0.0514 S32: -0.2301 S33: -0.0096 REMARK 3 TLS GROUP : 17 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 26 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 84.9111-130.0388 13.8524 REMARK 3 T TENSOR REMARK 3 T11: 0.9794 T22: 0.6265 REMARK 3 T33: 0.7352 T12: 0.2024 REMARK 3 T13: 0.2414 T23: -0.0041 REMARK 3 L TENSOR REMARK 3 L11: 0.0079 L22: 0.0310 REMARK 3 L33: 0.0059 L12: 0.0163 REMARK 3 L13: 0.0146 L23: 0.0204 REMARK 3 S TENSOR REMARK 3 S11: -0.3598 S12: 0.0071 S13: 0.0719 REMARK 3 S21: -0.2256 S22: -0.0341 S23: 0.0971 REMARK 3 S31: -0.3081 S32: -0.2904 S33: -0.0001 REMARK 3 TLS GROUP : 18 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 43 THROUGH 56 ) REMARK 3 ORIGIN FOR THE GROUP (A): 91.5425-141.7747 22.2848 REMARK 3 T TENSOR REMARK 3 T11: 1.6703 T22: 1.0207 REMARK 3 T33: 0.4162 T12: 0.6599 REMARK 3 T13: 0.0193 T23: -0.0946 REMARK 3 L TENSOR REMARK 3 L11: 0.2712 L22: 0.9343 REMARK 3 L33: 0.1490 L12: -0.5052 REMARK 3 L13: 0.1952 L23: -0.3763 REMARK 3 S TENSOR REMARK 3 S11: 0.0739 S12: -0.1224 S13: -0.0992 REMARK 3 S21: 0.0583 S22: 0.3395 S23: 0.3051 REMARK 3 S31: 0.1548 S32: -0.5085 S33: 0.0508 REMARK 3 TLS GROUP : 19 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 57 THROUGH 76 ) REMARK 3 ORIGIN FOR THE GROUP (A): 91.6904-143.2258 11.3697 REMARK 3 T TENSOR REMARK 3 T11: 1.1645 T22: 0.1688 REMARK 3 T33: 0.9696 T12: 0.0522 REMARK 3 T13: 0.3546 T23: 0.2161 REMARK 3 L TENSOR REMARK 3 L11: 0.5760 L22: 0.0931 REMARK 3 L33: 0.3365 L12: -0.0548 REMARK 3 L13: -0.4452 L23: 0.0405 REMARK 3 S TENSOR REMARK 3 S11: -0.8163 S12: 0.6032 S13: -0.0713 REMARK 3 S21: -0.2658 S22: 0.3731 S23: -0.4793 REMARK 3 S31: 0.2648 S32: -0.3933 S33: -0.0796 REMARK 3 TLS GROUP : 20 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 77 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): 91.0534-133.2545 4.8504 REMARK 3 T TENSOR REMARK 3 T11: 0.6401 T22: 0.6831 REMARK 3 T33: 0.5921 T12: 0.2086 REMARK 3 T13: 0.1707 T23: 0.0601 REMARK 3 L TENSOR REMARK 3 L11: 0.0118 L22: 0.2231 REMARK 3 L33: 0.2290 L12: -0.0425 REMARK 3 L13: -0.0044 L23: -0.1247 REMARK 3 S TENSOR REMARK 3 S11: -0.2392 S12: 0.4527 S13: 0.2453 REMARK 3 S21: -0.0266 S22: 0.1522 S23: -0.4488 REMARK 3 S31: 0.2470 S32: -0.9283 S33: 0.0061 REMARK 3 TLS GROUP : 21 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 104 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 100.0167-146.8130 6.2634 REMARK 3 T TENSOR REMARK 3 T11: 1.4147 T22: 0.5239 REMARK 3 T33: 1.0778 T12: 0.1376 REMARK 3 T13: 0.2656 T23: 0.2253 REMARK 3 L TENSOR REMARK 3 L11: 0.0075 L22: 0.0047 REMARK 3 L33: 0.0036 L12: -0.0103 REMARK 3 L13: 0.0126 L23: -0.0135 REMARK 3 S TENSOR REMARK 3 S11: 0.2692 S12: 0.0042 S13: -0.0626 REMARK 3 S21: -0.0778 S22: 0.2590 S23: -0.1353 REMARK 3 S31: 0.1601 S32: 0.0077 S33: -0.0001 REMARK 3 TLS GROUP : 22 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 112 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): 89.7458-149.5290 5.3921 REMARK 3 T TENSOR REMARK 3 T11: 1.2437 T22: 0.5753 REMARK 3 T33: 1.0830 T12: 0.3000 REMARK 3 T13: -0.0832 T23: -0.0881 REMARK 3 L TENSOR REMARK 3 L11: -0.0017 L22: 0.0065 REMARK 3 L33: 0.0029 L12: -0.0018 REMARK 3 L13: -0.0002 L23: 0.0056 REMARK 3 S TENSOR REMARK 3 S11: 0.1328 S12: 0.0994 S13: -0.0896 REMARK 3 S21: -0.1186 S22: 0.4356 S23: -0.1801 REMARK 3 S31: 0.0606 S32: -0.0382 S33: 0.0000 REMARK 3 TLS GROUP : 23 REMARK 3 SELECTION: CHAIN 'E' AND (RESID 122 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): 99.4616-139.4103 5.9386 REMARK 3 T TENSOR REMARK 3 T11: 0.9769 T22: 0.1403 REMARK 3 T33: 0.7733 T12: 0.8506 REMARK 3 T13: 0.0447 T23: 0.1272 REMARK 3 L TENSOR REMARK 3 L11: 0.0403 L22: 0.0710 REMARK 3 L33: 0.0271 L12: 0.0501 REMARK 3 L13: 0.0322 L23: 0.0463 REMARK 3 S TENSOR REMARK 3 S11: 0.0010 S12: -0.0648 S13: 0.1107 REMARK 3 S21: 0.0308 S22: 0.1699 S23: -0.3798 REMARK 3 S31: 0.0795 S32: 0.0097 S33: 0.2805 REMARK 3 TLS GROUP : 24 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 13 THROUGH 25 ) REMARK 3 ORIGIN FOR THE GROUP (A): 94.6476-112.4454 -44.4473 REMARK 3 T TENSOR REMARK 3 T11: 0.8079 T22: 1.4418 REMARK 3 T33: 0.7070 T12: 0.0626 REMARK 3 T13: 0.0293 T23: 0.2873 REMARK 3 L TENSOR REMARK 3 L11: -0.0031 L22: 0.0248 REMARK 3 L33: 0.0201 L12: -0.0008 REMARK 3 L13: 0.0001 L23: 0.0269 REMARK 3 S TENSOR REMARK 3 S11: -0.0439 S12: -0.0013 S13: 0.4024 REMARK 3 S21: 0.1148 S22: -0.1737 S23: 0.2167 REMARK 3 S31: 0.2465 S32: 0.0720 S33: -0.0000 REMARK 3 TLS GROUP : 25 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 26 THROUGH 42 ) REMARK 3 ORIGIN FOR THE GROUP (A): 84.0399-129.4243 -38.2957 REMARK 3 T TENSOR REMARK 3 T11: 0.5972 T22: 1.0550 REMARK 3 T33: 0.5147 T12: 0.0287 REMARK 3 T13: 0.3014 T23: -0.1824 REMARK 3 L TENSOR REMARK 3 L11: 0.0158 L22: 0.4007 REMARK 3 L33: 0.2267 L12: 0.0626 REMARK 3 L13: -0.0402 L23: -0.1527 REMARK 3 S TENSOR REMARK 3 S11: -0.1577 S12: -0.1434 S13: -0.2637 REMARK 3 S21: -0.0371 S22: -0.3274 S23: 0.0182 REMARK 3 S31: 0.1184 S32: 0.3078 S33: -0.4462 REMARK 3 TLS GROUP : 26 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 43 THROUGH 50 ) REMARK 3 ORIGIN FOR THE GROUP (A): 71.2013-134.3648 -47.9634 REMARK 3 T TENSOR REMARK 3 T11: 1.4674 T22: 2.2914 REMARK 3 T33: 1.3413 T12: -0.3806 REMARK 3 T13: -0.9549 T23: -0.3086 REMARK 3 L TENSOR REMARK 3 L11: 0.4147 L22: 0.2229 REMARK 3 L33: 0.2525 L12: 0.2707 REMARK 3 L13: -0.3139 L23: -0.2333 REMARK 3 S TENSOR REMARK 3 S11: -0.0468 S12: -0.1061 S13: 0.0400 REMARK 3 S21: 0.0375 S22: -0.0033 S23: -0.0972 REMARK 3 S31: -0.0154 S32: 0.0760 S33: -0.0938 REMARK 3 TLS GROUP : 27 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 51 THROUGH 66 ) REMARK 3 ORIGIN FOR THE GROUP (A): 66.6675-122.2797 -43.2903 REMARK 3 T TENSOR REMARK 3 T11: 0.6834 T22: 1.5460 REMARK 3 T33: 1.0280 T12: 0.1491 REMARK 3 T13: -0.0478 T23: -0.1122 REMARK 3 L TENSOR REMARK 3 L11: 0.0065 L22: 0.0015 REMARK 3 L33: 0.0061 L12: -0.0064 REMARK 3 L13: -0.0048 L23: -0.0060 REMARK 3 S TENSOR REMARK 3 S11: -0.2054 S12: 0.1730 S13: 0.1669 REMARK 3 S21: -0.2051 S22: -0.3093 S23: 0.3935 REMARK 3 S31: 0.1672 S32: 0.3379 S33: -0.0002 REMARK 3 TLS GROUP : 28 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 67 THROUGH 93 ) REMARK 3 ORIGIN FOR THE GROUP (A): 77.8301-132.0834 -30.8699 REMARK 3 T TENSOR REMARK 3 T11: 0.8577 T22: 0.8045 REMARK 3 T33: 0.6187 T12: -0.0558 REMARK 3 T13: -0.0364 T23: -0.2232 REMARK 3 L TENSOR REMARK 3 L11: 0.0768 L22: 0.0306 REMARK 3 L33: 0.0059 L12: 0.0682 REMARK 3 L13: 0.0157 L23: 0.0327 REMARK 3 S TENSOR REMARK 3 S11: -0.2859 S12: 0.3235 S13: -0.0084 REMARK 3 S21: 0.4684 S22: 0.2130 S23: -0.1237 REMARK 3 S31: 1.2691 S32: -0.5106 S33: -0.0003 REMARK 3 TLS GROUP : 29 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 94 THROUGH 111 ) REMARK 3 ORIGIN FOR THE GROUP (A): 69.9045-122.2300 -27.9979 REMARK 3 T TENSOR REMARK 3 T11: 0.4279 T22: 0.8550 REMARK 3 T33: 0.8574 T12: -0.2607 REMARK 3 T13: 0.0762 T23: -0.1371 REMARK 3 L TENSOR REMARK 3 L11: 0.0781 L22: 0.0610 REMARK 3 L33: -0.0031 L12: -0.0762 REMARK 3 L13: 0.0198 L23: -0.0258 REMARK 3 S TENSOR REMARK 3 S11: 0.0681 S12: 0.1182 S13: 0.5635 REMARK 3 S21: 0.2748 S22: 0.1239 S23: 0.3959 REMARK 3 S31: 0.0134 S32: -0.0888 S33: 0.1028 REMARK 3 TLS GROUP : 30 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 112 THROUGH 121 ) REMARK 3 ORIGIN FOR THE GROUP (A): 65.0827-135.3728 -29.6430 REMARK 3 T TENSOR REMARK 3 T11: 0.5708 T22: 0.9690 REMARK 3 T33: 1.6316 T12: -0.2874 REMARK 3 T13: 0.0179 T23: -0.0352 REMARK 3 L TENSOR REMARK 3 L11: 0.4450 L22: 0.0409 REMARK 3 L33: 0.7610 L12: 0.0083 REMARK 3 L13: 0.3059 L23: 0.1585 REMARK 3 S TENSOR REMARK 3 S11: 0.1339 S12: 0.0674 S13: -0.3627 REMARK 3 S21: 0.1749 S22: -0.0045 S23: 0.2290 REMARK 3 S31: 0.4426 S32: -0.5185 S33: 0.0406 REMARK 3 TLS GROUP : 31 REMARK 3 SELECTION: CHAIN 'F' AND (RESID 122 THROUGH 133 ) REMARK 3 ORIGIN FOR THE GROUP (A): 68.8306-121.4831 -30.4748 REMARK 3 T TENSOR REMARK 3 T11: 0.2560 T22: 1.2053 REMARK 3 T33: 1.0511 T12: -0.0911 REMARK 3 T13: 0.0606 T23: -0.1821 REMARK 3 L TENSOR REMARK 3 L11: 0.4502 L22: 0.1822 REMARK 3 L33: 0.0102 L12: -0.0141 REMARK 3 L13: -0.0466 L23: -0.0208 REMARK 3 S TENSOR REMARK 3 S11: 0.1032 S12: 0.1639 S13: 0.5321 REMARK 3 S21: 0.2097 S22: 0.1573 S23: -0.0150 REMARK 3 S31: 0.0160 S32: -0.2422 S33: 0.1401 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZL3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 14-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000209415. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-NOV-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979065 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24244 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.200 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 5.500 REMARK 200 R MERGE (I) : 0.09500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.31 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.55600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3KMP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.96 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M BIS-TRIS, PH 6.5, 0.2M LINO3, 8% REMARK 280 PEG 3350, 5% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.02233 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 62.04467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12720 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 41880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -92.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C, D, A, E, G, H, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 THR B 2 REMARK 465 SER B 3 REMARK 465 MET B 4 REMARK 465 ALA B 5 REMARK 465 SER B 6 REMARK 465 LEU B 7 REMARK 465 PHE B 8 REMARK 465 SER B 9 REMARK 465 PHE B 10 REMARK 465 THR B 11 REMARK 465 SER B 12 REMARK 465 PRO B 134 REMARK 465 VAL B 135 REMARK 465 LEU B 136 REMARK 465 PRO B 137 REMARK 465 PRO B 138 REMARK 465 VAL B 139 REMARK 465 LEU B 140 REMARK 465 VAL B 141 REMARK 465 PRO B 142 REMARK 465 ARG B 143 REMARK 465 LEU B 144 REMARK 465 GLU B 145 REMARK 465 HIS B 146 REMARK 465 HIS B 147 REMARK 465 HIS B 148 REMARK 465 HIS B 149 REMARK 465 HIS B 150 REMARK 465 HIS B 151 REMARK 465 MET A 1 REMARK 465 THR A 2 REMARK 465 SER A 3 REMARK 465 MET A 4 REMARK 465 ALA A 5 REMARK 465 SER A 6 REMARK 465 LEU A 7 REMARK 465 PHE A 8 REMARK 465 SER A 9 REMARK 465 PHE A 10 REMARK 465 THR A 11 REMARK 465 SER A 12 REMARK 465 PRO A 134 REMARK 465 VAL A 135 REMARK 465 LEU A 136 REMARK 465 PRO A 137 REMARK 465 PRO A 138 REMARK 465 VAL A 139 REMARK 465 LEU A 140 REMARK 465 VAL A 141 REMARK 465 PRO A 142 REMARK 465 ARG A 143 REMARK 465 LEU A 144 REMARK 465 GLU A 145 REMARK 465 HIS A 146 REMARK 465 HIS A 147 REMARK 465 HIS A 148 REMARK 465 HIS A 149 REMARK 465 HIS A 150 REMARK 465 HIS A 151 REMARK 465 MET E 1 REMARK 465 THR E 2 REMARK 465 SER E 3 REMARK 465 MET E 4 REMARK 465 ALA E 5 REMARK 465 SER E 6 REMARK 465 LEU E 7 REMARK 465 PHE E 8 REMARK 465 SER E 9 REMARK 465 PHE E 10 REMARK 465 THR E 11 REMARK 465 SER E 12 REMARK 465 PRO E 134 REMARK 465 VAL E 135 REMARK 465 LEU E 136 REMARK 465 PRO E 137 REMARK 465 PRO E 138 REMARK 465 VAL E 139 REMARK 465 LEU E 140 REMARK 465 VAL E 141 REMARK 465 PRO E 142 REMARK 465 ARG E 143 REMARK 465 LEU E 144 REMARK 465 GLU E 145 REMARK 465 HIS E 146 REMARK 465 HIS E 147 REMARK 465 HIS E 148 REMARK 465 HIS E 149 REMARK 465 HIS E 150 REMARK 465 HIS E 151 REMARK 465 MET F 1 REMARK 465 THR F 2 REMARK 465 SER F 3 REMARK 465 MET F 4 REMARK 465 ALA F 5 REMARK 465 SER F 6 REMARK 465 LEU F 7 REMARK 465 PHE F 8 REMARK 465 SER F 9 REMARK 465 PHE F 10 REMARK 465 THR F 11 REMARK 465 SER F 12 REMARK 465 PRO F 134 REMARK 465 VAL F 135 REMARK 465 LEU F 136 REMARK 465 PRO F 137 REMARK 465 PRO F 138 REMARK 465 VAL F 139 REMARK 465 LEU F 140 REMARK 465 VAL F 141 REMARK 465 PRO F 142 REMARK 465 ARG F 143 REMARK 465 LEU F 144 REMARK 465 GLU F 145 REMARK 465 HIS F 146 REMARK 465 HIS F 147 REMARK 465 HIS F 148 REMARK 465 HIS F 149 REMARK 465 HIS F 150 REMARK 465 HIS F 151 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA D 16 O4' - C1' - N9 ANGL. DEV. = 2.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG B 94 -67.73 -134.75 REMARK 500 VAL B 131 -158.10 -135.21 REMARK 500 ARG A 94 -67.15 -135.55 REMARK 500 LYS A 119 99.60 -60.79 REMARK 500 VAL A 131 -157.09 -135.58 REMARK 500 ARG E 94 -70.29 -134.70 REMARK 500 GLN E 99 -78.10 -101.02 REMARK 500 LYS E 119 94.85 -66.00 REMARK 500 ARG F 94 -69.51 -136.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 111 OE2 REMARK 620 2 CYS B 122 SG 90.1 REMARK 620 3 HIS B 127 ND1 104.7 163.1 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 65 SG REMARK 620 2 CYS A 110 SG 104.9 REMARK 620 3 CYS A 122 SG 94.2 105.2 REMARK 620 4 HIS A 127 ND1 98.7 153.2 85.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN E 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS E 110 SG REMARK 620 2 CYS E 122 SG 103.3 REMARK 620 3 HIS E 127 ND1 113.6 83.9 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN F 201 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS F 65 SG REMARK 620 2 CYS F 110 SG 97.4 REMARK 620 3 CYS F 122 SG 104.7 117.8 REMARK 620 4 HIS F 127 ND1 108.8 88.1 134.2 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN E 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN F 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ZKG RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMPLEX WITH A SBE DNA SEQUENCE REMARK 900 RELATED ID: 4ZL2 RELATED DB: PDB REMARK 900 THE SAME PROTEIN IN COMPLEX WITH A GC-BRE DNA SEQUENCE DBREF 4ZL3 B 1 143 UNP P97454 SMAD5_MOUSE 1 143 DBREF 4ZL3 C 1 22 PDB 4ZL3 4ZL3 1 22 DBREF 4ZL3 D 1 22 PDB 4ZL3 4ZL3 1 22 DBREF 4ZL3 A 1 143 UNP P97454 SMAD5_MOUSE 1 143 DBREF 4ZL3 E 1 143 UNP P97454 SMAD5_MOUSE 1 143 DBREF 4ZL3 G 1 22 PDB 4ZL3 4ZL3 1 22 DBREF 4ZL3 H 1 22 PDB 4ZL3 4ZL3 1 22 DBREF 4ZL3 F 1 143 UNP P97454 SMAD5_MOUSE 1 143 SEQADV 4ZL3 LEU B 144 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 GLU B 145 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS B 146 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS B 147 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS B 148 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS B 149 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS B 150 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS B 151 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 LEU A 144 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 GLU A 145 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS A 146 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS A 147 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS A 148 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS A 149 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS A 150 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS A 151 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 LEU E 144 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 GLU E 145 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS E 146 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS E 147 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS E 148 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS E 149 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS E 150 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS E 151 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 LEU F 144 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 GLU F 145 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS F 146 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS F 147 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS F 148 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS F 149 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS F 150 UNP P97454 EXPRESSION TAG SEQADV 4ZL3 HIS F 151 UNP P97454 EXPRESSION TAG SEQRES 1 B 151 MET THR SER MET ALA SER LEU PHE SER PHE THR SER PRO SEQRES 2 B 151 ALA VAL LYS ARG LEU LEU GLY TRP LYS GLN GLY ASP GLU SEQRES 3 B 151 GLU GLU LYS TRP ALA GLU LYS ALA VAL ASP ALA LEU VAL SEQRES 4 B 151 LYS LYS LEU LYS LYS LYS LYS GLY ALA MET GLU GLU LEU SEQRES 5 B 151 GLU LYS ALA LEU SER SER PRO GLY GLN PRO SER LYS CYS SEQRES 6 B 151 VAL THR ILE PRO ARG SER LEU ASP GLY ARG LEU GLN VAL SEQRES 7 B 151 SER HIS ARG LYS GLY LEU PRO HIS VAL ILE TYR CYS ARG SEQRES 8 B 151 VAL TRP ARG TRP PRO ASP LEU GLN SER HIS HIS GLU LEU SEQRES 9 B 151 LYS PRO LEU ASP ILE CYS GLU PHE PRO PHE GLY SER LYS SEQRES 10 B 151 GLN LYS GLU VAL CYS ILE ASN PRO TYR HIS TYR LYS ARG SEQRES 11 B 151 VAL GLU SER PRO VAL LEU PRO PRO VAL LEU VAL PRO ARG SEQRES 12 B 151 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 C 22 DA DT DC DA DG DA DC DT DG DC DC DG DG SEQRES 2 C 22 DC DA DG DT DC DT DA DT DA SEQRES 1 D 22 DT DT DA DT DA DG DA DC DT DG DC DC DG SEQRES 2 D 22 DG DC DA DG DT DC DT DG DA SEQRES 1 A 151 MET THR SER MET ALA SER LEU PHE SER PHE THR SER PRO SEQRES 2 A 151 ALA VAL LYS ARG LEU LEU GLY TRP LYS GLN GLY ASP GLU SEQRES 3 A 151 GLU GLU LYS TRP ALA GLU LYS ALA VAL ASP ALA LEU VAL SEQRES 4 A 151 LYS LYS LEU LYS LYS LYS LYS GLY ALA MET GLU GLU LEU SEQRES 5 A 151 GLU LYS ALA LEU SER SER PRO GLY GLN PRO SER LYS CYS SEQRES 6 A 151 VAL THR ILE PRO ARG SER LEU ASP GLY ARG LEU GLN VAL SEQRES 7 A 151 SER HIS ARG LYS GLY LEU PRO HIS VAL ILE TYR CYS ARG SEQRES 8 A 151 VAL TRP ARG TRP PRO ASP LEU GLN SER HIS HIS GLU LEU SEQRES 9 A 151 LYS PRO LEU ASP ILE CYS GLU PHE PRO PHE GLY SER LYS SEQRES 10 A 151 GLN LYS GLU VAL CYS ILE ASN PRO TYR HIS TYR LYS ARG SEQRES 11 A 151 VAL GLU SER PRO VAL LEU PRO PRO VAL LEU VAL PRO ARG SEQRES 12 A 151 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 E 151 MET THR SER MET ALA SER LEU PHE SER PHE THR SER PRO SEQRES 2 E 151 ALA VAL LYS ARG LEU LEU GLY TRP LYS GLN GLY ASP GLU SEQRES 3 E 151 GLU GLU LYS TRP ALA GLU LYS ALA VAL ASP ALA LEU VAL SEQRES 4 E 151 LYS LYS LEU LYS LYS LYS LYS GLY ALA MET GLU GLU LEU SEQRES 5 E 151 GLU LYS ALA LEU SER SER PRO GLY GLN PRO SER LYS CYS SEQRES 6 E 151 VAL THR ILE PRO ARG SER LEU ASP GLY ARG LEU GLN VAL SEQRES 7 E 151 SER HIS ARG LYS GLY LEU PRO HIS VAL ILE TYR CYS ARG SEQRES 8 E 151 VAL TRP ARG TRP PRO ASP LEU GLN SER HIS HIS GLU LEU SEQRES 9 E 151 LYS PRO LEU ASP ILE CYS GLU PHE PRO PHE GLY SER LYS SEQRES 10 E 151 GLN LYS GLU VAL CYS ILE ASN PRO TYR HIS TYR LYS ARG SEQRES 11 E 151 VAL GLU SER PRO VAL LEU PRO PRO VAL LEU VAL PRO ARG SEQRES 12 E 151 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 G 22 DA DT DC DA DG DA DC DT DG DC DC DG DG SEQRES 2 G 22 DC DA DG DT DC DT DA DT DA SEQRES 1 H 22 DT DT DA DT DA DG DA DC DT DG DC DC DG SEQRES 2 H 22 DG DC DA DG DT DC DT DG DA SEQRES 1 F 151 MET THR SER MET ALA SER LEU PHE SER PHE THR SER PRO SEQRES 2 F 151 ALA VAL LYS ARG LEU LEU GLY TRP LYS GLN GLY ASP GLU SEQRES 3 F 151 GLU GLU LYS TRP ALA GLU LYS ALA VAL ASP ALA LEU VAL SEQRES 4 F 151 LYS LYS LEU LYS LYS LYS LYS GLY ALA MET GLU GLU LEU SEQRES 5 F 151 GLU LYS ALA LEU SER SER PRO GLY GLN PRO SER LYS CYS SEQRES 6 F 151 VAL THR ILE PRO ARG SER LEU ASP GLY ARG LEU GLN VAL SEQRES 7 F 151 SER HIS ARG LYS GLY LEU PRO HIS VAL ILE TYR CYS ARG SEQRES 8 F 151 VAL TRP ARG TRP PRO ASP LEU GLN SER HIS HIS GLU LEU SEQRES 9 F 151 LYS PRO LEU ASP ILE CYS GLU PHE PRO PHE GLY SER LYS SEQRES 10 F 151 GLN LYS GLU VAL CYS ILE ASN PRO TYR HIS TYR LYS ARG SEQRES 11 F 151 VAL GLU SER PRO VAL LEU PRO PRO VAL LEU VAL PRO ARG SEQRES 12 F 151 LEU GLU HIS HIS HIS HIS HIS HIS HET ZN B 201 1 HET ZN A 201 1 HET ZN E 201 1 HET ZN F 201 1 HETNAM ZN ZINC ION FORMUL 9 ZN 4(ZN 2+) HELIX 1 AA1 VAL B 15 GLY B 20 1 6 HELIX 2 AA2 ASP B 25 LYS B 43 1 19 HELIX 3 AA3 GLU B 50 SER B 57 1 8 HELIX 4 AA4 LEU B 84 ARG B 94 1 11 HELIX 5 AA5 ALA A 14 GLY A 20 1 7 HELIX 6 AA6 ASP A 25 LYS A 43 1 19 HELIX 7 AA7 GLU A 50 SER A 57 1 8 HELIX 8 AA8 LEU A 84 ARG A 94 1 11 HELIX 9 AA9 VAL E 15 TRP E 21 1 7 HELIX 10 AB1 ASP E 25 LYS E 43 1 19 HELIX 11 AB2 ALA E 48 SER E 57 1 10 HELIX 12 AB3 LEU E 84 ARG E 94 1 11 HELIX 13 AB4 ASN E 124 TYR E 126 5 3 HELIX 14 AB5 PRO F 13 LYS F 22 5 10 HELIX 15 AB6 ASP F 25 LYS F 43 1 19 HELIX 16 AB7 GLU F 50 SER F 57 1 8 HELIX 17 AB8 LEU F 84 ARG F 94 1 11 SHEET 1 AA1 2 LEU B 76 GLN B 77 0 SHEET 2 AA1 2 LYS B 82 GLY B 83 -1 O GLY B 83 N LEU B 76 SHEET 1 AA2 2 LEU B 104 PRO B 106 0 SHEET 2 AA2 2 TYR B 128 ARG B 130 -1 O LYS B 129 N LYS B 105 SHEET 1 AA3 2 LEU A 104 PRO A 106 0 SHEET 2 AA3 2 TYR A 128 ARG A 130 -1 O LYS A 129 N LYS A 105 SHEET 1 AA4 2 LEU E 76 GLN E 77 0 SHEET 2 AA4 2 LYS E 82 GLY E 83 -1 O GLY E 83 N LEU E 76 SHEET 1 AA5 2 LEU E 104 PRO E 106 0 SHEET 2 AA5 2 TYR E 128 ARG E 130 -1 O LYS E 129 N LYS E 105 SHEET 1 AA6 2 LEU F 76 GLN F 77 0 SHEET 2 AA6 2 LYS F 82 GLY F 83 -1 O GLY F 83 N LEU F 76 SHEET 1 AA7 2 LEU F 104 PRO F 106 0 SHEET 2 AA7 2 TYR F 128 ARG F 130 -1 O LYS F 129 N LYS F 105 LINK OE2 GLU B 111 ZN ZN B 201 1555 1555 2.01 LINK SG CYS B 122 ZN ZN B 201 1555 1555 2.61 LINK ND1 HIS B 127 ZN ZN B 201 1555 1555 2.29 LINK SG CYS A 65 ZN ZN A 201 1555 1555 2.37 LINK SG CYS A 110 ZN ZN A 201 1555 1555 2.73 LINK SG CYS A 122 ZN ZN A 201 1555 1555 2.32 LINK ND1 HIS A 127 ZN ZN A 201 1555 1555 2.21 LINK SG CYS E 110 ZN ZN E 201 1555 1555 2.82 LINK SG CYS E 122 ZN ZN E 201 1555 1555 2.21 LINK ND1 HIS E 127 ZN ZN E 201 1555 1555 2.01 LINK SG CYS F 65 ZN ZN F 201 1555 1555 2.40 LINK SG CYS F 110 ZN ZN F 201 1555 1555 2.90 LINK SG CYS F 122 ZN ZN F 201 1555 1555 2.20 LINK ND1 HIS F 127 ZN ZN F 201 1555 1555 2.10 CISPEP 1 SER B 100 HIS B 101 0 -1.83 CISPEP 2 GLU B 120 VAL B 121 0 3.41 CISPEP 3 GLU A 120 VAL A 121 0 3.37 CISPEP 4 GLU E 120 VAL E 121 0 1.62 CISPEP 5 SER F 100 HIS F 101 0 -2.10 CISPEP 6 GLU F 120 VAL F 121 0 3.54 SITE 1 AC1 4 GLU B 111 CYS B 122 ASN B 124 HIS B 127 SITE 1 AC2 4 CYS A 65 CYS A 110 CYS A 122 HIS A 127 SITE 1 AC3 4 CYS E 65 CYS E 110 CYS E 122 HIS E 127 SITE 1 AC4 4 CYS F 65 CYS F 110 CYS F 122 HIS F 127 CRYST1 119.464 119.464 93.067 90.00 90.00 120.00 P 31 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008371 0.004833 0.000000 0.00000 SCALE2 0.000000 0.009666 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010745 0.00000