HEADER DNA BINDING PROTEIN 04-MAY-15 4ZMS TITLE STRUCTURE OF THE FULL-LENGTH RESPONSE REGULATOR SPR1814 IN COMPLEX TITLE 2 WITH A PHOSPHATE ANALOGUE AND B3C COMPND MOL_ID: 1; COMPND 2 MOLECULE: RESPONSE REGULATOR; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE (STRAIN ATCC BAA-255 / SOURCE 3 R6); SOURCE 4 ORGANISM_TAXID: 171101; SOURCE 5 STRAIN: ATCC BAA-255 / R6; SOURCE 6 GENE: RR11, SPR1814; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS RESPONSE REGULATOR, DNA BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR Y.M.CHI,A.PARK REVDAT 4 20-MAR-24 4ZMS 1 LINK REVDAT 3 19-FEB-20 4ZMS 1 JRNL REMARK REVDAT 2 04-MAY-16 4ZMS 1 JRNL REVDAT 1 27-APR-16 4ZMS 0 JRNL AUTH A.K.PARK,J.H.LEE,Y.M.CHI,H.PARK JRNL TITL STRUCTURAL CHARACTERIZATION OF THE FULL-LENGTH RESPONSE JRNL TITL 2 REGULATOR SPR1814 IN COMPLEX WITH A PHOSPHATE ANALOGUE JRNL TITL 3 REVEALS A NOVEL CONFORMATIONAL PLASTICITY OF THE LINKER JRNL TITL 4 REGION JRNL REF BIOCHEM.BIOPHYS.RES.COMMUN. V. 473 625 2016 JRNL REFN ESSN 1090-2104 JRNL PMID 27038544 JRNL DOI 10.1016/J.BBRC.2016.03.144 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.82 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.520 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 3 NUMBER OF REFLECTIONS : 35816 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.215 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.840 REMARK 3 FREE R VALUE TEST SET COUNT : 1732 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.8242 - 4.3373 0.99 2949 164 0.1453 0.1757 REMARK 3 2 4.3373 - 3.4434 0.99 2878 166 0.1369 0.1890 REMARK 3 3 3.4434 - 3.0083 0.99 2904 151 0.1612 0.2034 REMARK 3 4 3.0083 - 2.7334 0.99 2893 137 0.1742 0.2487 REMARK 3 5 2.7334 - 2.5375 0.98 2855 157 0.1712 0.2299 REMARK 3 6 2.5375 - 2.3879 0.98 2854 160 0.1706 0.2234 REMARK 3 7 2.3879 - 2.2684 0.98 2850 120 0.1614 0.2106 REMARK 3 8 2.2684 - 2.1696 0.98 2847 159 0.1657 0.2162 REMARK 3 9 2.1696 - 2.0861 0.97 2852 136 0.1775 0.2369 REMARK 3 10 2.0861 - 2.0141 0.96 2787 144 0.1916 0.2630 REMARK 3 11 2.0141 - 1.9511 0.95 2785 124 0.2085 0.2814 REMARK 3 12 1.9511 - 1.8954 0.89 2630 114 0.2352 0.2905 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.29 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.018 3235 REMARK 3 ANGLE : 1.772 4370 REMARK 3 CHIRALITY : 0.074 521 REMARK 3 PLANARITY : 0.008 556 REMARK 3 DIHEDRAL : 17.467 1238 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZMS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000209550. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-MAY-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-5A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9198 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35816 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 200 DATA REDUNDANCY : 9.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 4.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M SODIUM CITRATE TRIBASIC DIHYDRATE REMARK 280 PH 5.0, 30%(V/V) JEFFAMINE ED-2001 PH 7, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 57.76300 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -29.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 199 O REMARK 470 LEU B 199 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 H3 GLY A -7 O HOH A 301 1.00 REMARK 500 O HOH B 464 O HOH B 492 1.44 REMARK 500 HZ2 LYS A 2 O HOH A 302 1.46 REMARK 500 HZ1 LYS B 94 O HOH B 303 1.53 REMARK 500 N GLY A -7 O HOH A 301 1.89 REMARK 500 O HOH B 439 O HOH B 494 1.96 REMARK 500 O HOH B 466 O HOH B 542 2.01 REMARK 500 NZ LYS A 2 O HOH A 302 2.03 REMARK 500 O HOH B 524 O HOH B 539 2.13 REMARK 500 O HOH B 385 O HOH B 460 2.15 REMARK 500 OE1 GLU A 127 O HOH A 303 2.16 REMARK 500 OE1 GLU B 127 O HOH B 301 2.17 REMARK 500 O HOH B 473 O HOH B 501 2.18 REMARK 500 OE1 GLU A 90 O HOH A 304 2.19 REMARK 500 O HOH A 312 O HOH A 484 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 362 O HOH B 439 1455 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 53 CB - CG - OD1 ANGL. DEV. = 6.3 DEGREES REMARK 500 ASP A 53 CB - CG - OD2 ANGL. DEV. = -6.7 DEGREES REMARK 500 ARG A 121 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG A 121 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 MET B 111 CG - SD - CE ANGL. DEV. = -19.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 HIS A 0 60.96 -156.11 REMARK 500 VAL A 58 -60.32 79.54 REMARK 500 ASN A 185 -162.48 -113.09 REMARK 500 VAL B 58 -59.25 72.73 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A 531 DISTANCE = 6.35 ANGSTROMS REMARK 525 HOH B 572 DISTANCE = 6.33 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 8 OD1 REMARK 620 2 ASP A 53 OD2 81.0 REMARK 620 3 GLU A 55 O 87.4 88.6 REMARK 620 4 HOH A 366 O 88.8 88.4 175.5 REMARK 620 5 HOH A 433 O 96.1 175.1 95.3 87.5 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B 201 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 8 OD1 REMARK 620 2 ASP B 53 OD1 86.7 REMARK 620 3 GLU B 55 O 93.7 83.1 REMARK 620 4 HOH B 394 O 94.0 92.9 171.2 REMARK 620 5 HOH B 451 O 100.2 170.0 89.1 93.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BEF A 202 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4QT A 203 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BEF B 202 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ZMR RELATED DB: PDB DBREF 4ZMS A 1 199 UNP Q8DNC2 Q8DNC2_STRR6 1 199 DBREF 4ZMS B 1 199 UNP Q8DNC2 Q8DNC2_STRR6 1 199 SEQADV 4ZMS GLY A -7 UNP Q8DNC2 EXPRESSION TAG SEQADV 4ZMS LEU A -6 UNP Q8DNC2 EXPRESSION TAG SEQADV 4ZMS VAL A -5 UNP Q8DNC2 EXPRESSION TAG SEQADV 4ZMS PRO A -4 UNP Q8DNC2 EXPRESSION TAG SEQADV 4ZMS ARG A -3 UNP Q8DNC2 EXPRESSION TAG SEQADV 4ZMS GLY A -2 UNP Q8DNC2 EXPRESSION TAG SEQADV 4ZMS SER A -1 UNP Q8DNC2 EXPRESSION TAG SEQADV 4ZMS HIS A 0 UNP Q8DNC2 EXPRESSION TAG SEQADV 4ZMS GLY B -7 UNP Q8DNC2 EXPRESSION TAG SEQADV 4ZMS LEU B -6 UNP Q8DNC2 EXPRESSION TAG SEQADV 4ZMS VAL B -5 UNP Q8DNC2 EXPRESSION TAG SEQADV 4ZMS PRO B -4 UNP Q8DNC2 EXPRESSION TAG SEQADV 4ZMS ARG B -3 UNP Q8DNC2 EXPRESSION TAG SEQADV 4ZMS GLY B -2 UNP Q8DNC2 EXPRESSION TAG SEQADV 4ZMS SER B -1 UNP Q8DNC2 EXPRESSION TAG SEQADV 4ZMS HIS B 0 UNP Q8DNC2 EXPRESSION TAG SEQRES 1 A 207 GLY LEU VAL PRO ARG GLY SER HIS MET LYS VAL LEU VAL SEQRES 2 A 207 ALA GLU ASP GLN SER MET LEU ARG ASP ALA MET CYS GLN SEQRES 3 A 207 LEU LEU THR LEU GLN PRO ASP VAL GLU SER VAL LEU GLN SEQRES 4 A 207 ALA LYS ASN GLY GLN GLU ALA ILE GLN LEU LEU GLU LYS SEQRES 5 A 207 GLU SER VAL ASP ILE ALA ILE LEU ASP VAL GLU MET PRO SEQRES 6 A 207 VAL LYS THR GLY LEU GLU VAL LEU GLU TRP ILE ARG SER SEQRES 7 A 207 GLU LYS LEU GLU THR LYS VAL VAL VAL VAL THR THR PHE SEQRES 8 A 207 LYS ARG ALA GLY TYR PHE GLU ARG ALA VAL LYS ALA GLY SEQRES 9 A 207 VAL ASP ALA TYR VAL LEU LYS GLU ARG SER ILE ALA ASP SEQRES 10 A 207 LEU MET GLN THR LEU HIS THR VAL LEU GLU GLY ARG LYS SEQRES 11 A 207 GLU TYR SER PRO GLU LEU MET GLU MET VAL MET THR ARG SEQRES 12 A 207 PRO ASN PRO LEU THR GLU GLN GLU ILE ALA VAL LEU LYS SEQRES 13 A 207 GLY ILE ALA ARG GLY LEU SER ASN GLN GLU ILE ALA ASP SEQRES 14 A 207 GLN LEU TYR LEU SER ASN GLY THR ILE ARG ASN TYR VAL SEQRES 15 A 207 THR ASN ILE LEU SER LYS LEU ASP ALA GLY ASN ARG THR SEQRES 16 A 207 GLU ALA ALA ASN ILE ALA LYS GLU SER GLY TRP LEU SEQRES 1 B 207 GLY LEU VAL PRO ARG GLY SER HIS MET LYS VAL LEU VAL SEQRES 2 B 207 ALA GLU ASP GLN SER MET LEU ARG ASP ALA MET CYS GLN SEQRES 3 B 207 LEU LEU THR LEU GLN PRO ASP VAL GLU SER VAL LEU GLN SEQRES 4 B 207 ALA LYS ASN GLY GLN GLU ALA ILE GLN LEU LEU GLU LYS SEQRES 5 B 207 GLU SER VAL ASP ILE ALA ILE LEU ASP VAL GLU MET PRO SEQRES 6 B 207 VAL LYS THR GLY LEU GLU VAL LEU GLU TRP ILE ARG SER SEQRES 7 B 207 GLU LYS LEU GLU THR LYS VAL VAL VAL VAL THR THR PHE SEQRES 8 B 207 LYS ARG ALA GLY TYR PHE GLU ARG ALA VAL LYS ALA GLY SEQRES 9 B 207 VAL ASP ALA TYR VAL LEU LYS GLU ARG SER ILE ALA ASP SEQRES 10 B 207 LEU MET GLN THR LEU HIS THR VAL LEU GLU GLY ARG LYS SEQRES 11 B 207 GLU TYR SER PRO GLU LEU MET GLU MET VAL MET THR ARG SEQRES 12 B 207 PRO ASN PRO LEU THR GLU GLN GLU ILE ALA VAL LEU LYS SEQRES 13 B 207 GLY ILE ALA ARG GLY LEU SER ASN GLN GLU ILE ALA ASP SEQRES 14 B 207 GLN LEU TYR LEU SER ASN GLY THR ILE ARG ASN TYR VAL SEQRES 15 B 207 THR ASN ILE LEU SER LYS LEU ASP ALA GLY ASN ARG THR SEQRES 16 B 207 GLU ALA ALA ASN ILE ALA LYS GLU SER GLY TRP LEU HET MG A 201 1 HET BEF A 202 4 HET 4QT A 203 18 HET MG B 201 1 HET BEF B 202 4 HETNAM MG MAGNESIUM ION HETNAM BEF BERYLLIUM TRIFLUORIDE ION HETNAM 4QT 5-AMINO-2,4,6-TRIBROMOBENZENE-1,3-DIYL DIHYDROPEROXIDE FORMUL 3 MG 2(MG 2+) FORMUL 4 BEF 2(BE F3 1-) FORMUL 5 4QT C6 H4 BR3 N O4 FORMUL 8 HOH *503(H2 O) HELIX 1 AA1 GLN A 9 GLN A 23 1 15 HELIX 2 AA2 ASN A 34 GLU A 43 1 10 HELIX 3 AA3 THR A 60 GLU A 71 1 12 HELIX 4 AA4 ARG A 85 ALA A 95 1 11 HELIX 5 AA5 SER A 106 GLU A 119 1 14 HELIX 6 AA6 SER A 125 THR A 134 1 10 HELIX 7 AA7 THR A 140 ARG A 152 1 13 HELIX 8 AA8 SER A 155 TYR A 164 1 10 HELIX 9 AA9 SER A 166 LEU A 181 1 16 HELIX 10 AB1 ASN A 185 SER A 196 1 12 HELIX 11 AB2 GLN B 9 LEU B 22 1 14 HELIX 12 AB3 ASN B 34 GLU B 45 1 12 HELIX 13 AB4 THR B 60 GLU B 71 1 12 HELIX 14 AB5 ARG B 85 ALA B 95 1 11 HELIX 15 AB6 SER B 106 GLU B 119 1 14 HELIX 16 AB7 SER B 125 MET B 133 1 9 HELIX 17 AB8 THR B 140 ARG B 152 1 13 HELIX 18 AB9 SER B 155 TYR B 164 1 10 HELIX 19 AC1 SER B 166 ASP B 182 1 17 HELIX 20 AC2 ASN B 185 SER B 196 1 12 SHEET 1 AA1 6 VAL A 26 ALA A 32 0 SHEET 2 AA1 6 MET A 1 ALA A 6 1 N VAL A 5 O LEU A 30 SHEET 3 AA1 6 ILE A 49 LEU A 52 1 O ILE A 51 N LEU A 4 SHEET 4 AA1 6 LYS A 76 THR A 81 1 O VAL A 78 N LEU A 52 SHEET 5 AA1 6 ALA A 99 LEU A 102 1 O VAL A 101 N VAL A 79 SHEET 6 AA1 6 GLU A 123 TYR A 124 1 O GLU A 123 N TYR A 100 SHEET 1 AA2 6 VAL B 26 ALA B 32 0 SHEET 2 AA2 6 MET B 1 ALA B 6 1 N VAL B 5 O LEU B 30 SHEET 3 AA2 6 ILE B 49 LEU B 52 1 O ILE B 51 N LEU B 4 SHEET 4 AA2 6 LYS B 76 THR B 81 1 O VAL B 78 N ALA B 50 SHEET 5 AA2 6 ALA B 99 LEU B 102 1 O ALA B 99 N VAL B 79 SHEET 6 AA2 6 GLU B 123 TYR B 124 1 O GLU B 123 N TYR B 100 LINK OD1 ASP A 8 MG MG A 201 1555 1555 2.10 LINK OD2 ASP A 53 MG MG A 201 1555 1555 2.17 LINK O GLU A 55 MG MG A 201 1555 1555 2.06 LINK MG MG A 201 O HOH A 366 1555 1555 2.14 LINK MG MG A 201 O HOH A 433 1555 1555 1.94 LINK OD1 ASP B 8 MG MG B 201 1555 1555 2.08 LINK OD1 ASP B 53 MG MG B 201 1555 1555 2.01 LINK O GLU B 55 MG MG B 201 1555 1555 2.05 LINK MG MG B 201 O HOH B 394 1555 1555 2.09 LINK MG MG B 201 O HOH B 451 1555 1555 2.16 SITE 1 AC1 6 ASP A 8 ASP A 53 GLU A 55 BEF A 202 SITE 2 AC1 6 HOH A 366 HOH A 433 SITE 1 AC2 11 ASP A 53 VAL A 54 GLU A 55 THR A 81 SITE 2 AC2 11 THR A 82 PHE A 83 LYS A 103 MG A 201 SITE 3 AC2 11 HOH A 366 HOH A 433 HOH A 460 SITE 1 AC3 3 LYS A 84 ARG A 85 ASP B 182 SITE 1 AC4 6 ASP B 8 ASP B 53 GLU B 55 BEF B 202 SITE 2 AC4 6 HOH B 394 HOH B 451 SITE 1 AC5 11 ASP B 53 VAL B 54 GLU B 55 THR B 81 SITE 2 AC5 11 THR B 82 PHE B 83 LYS B 103 MG B 201 SITE 3 AC5 11 HOH B 394 HOH B 451 HOH B 478 CRYST1 40.980 115.526 50.073 90.00 92.41 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024402 0.000000 0.001027 0.00000 SCALE2 0.000000 0.008656 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019989 0.00000