HEADER HYDROLASE,DNA BINDING PROTEIN 05-MAY-15 4ZO0 TITLE X-RAY STRUCTURE OF AAV-2 ORIGIN BINDING DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN REP68; COMPND 3 CHAIN: A, B, C; COMPND 4 FRAGMENT: ORIGIN BINDING DOMAIN (UNP RESIDUES 1-206); COMPND 5 EC: 3.6.4.12; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ADENO-ASSOCIATED VIRUS 2 (ISOLATE SOURCE 3 SRIVASTAVA/1982); SOURCE 4 ORGANISM_COMMON: AAV-2; SOURCE 5 ORGANISM_TAXID: 648242; SOURCE 6 STRAIN: ISOLATE SRIVASTAVA/1982; SOURCE 7 GENE: REP68; SOURCE 8 EXPRESSION_SYSTEM: ESCHERICHIA COLI 'BL21-GOLD(DE3)PLYSS AG'; SOURCE 9 EXPRESSION_SYSTEM_TAXID: 866768 KEYWDS ADENO-ASSOCIATED VIRUS, HUH NUCLEASE, DNA BINDING PROTEIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR F.N.MUSAYEV,F.ZARATE-PEREZ,C.R.ESCALANTE REVDAT 5 27-SEP-23 4ZO0 1 LINK REVDAT 4 25-DEC-19 4ZO0 1 REMARK REVDAT 3 27-SEP-17 4ZO0 1 REMARK REVDAT 2 09-AUG-17 4ZO0 1 JRNL REMARK REVDAT 1 07-OCT-15 4ZO0 0 JRNL AUTH F.N.MUSAYEV,F.ZARATE-PEREZ,M.BARDELLI,C.BISHOP,E.F.SANIEV, JRNL AUTH 2 R.M.LINDEN,E.HENCKAERTS,C.R.ESCALANTE JRNL TITL STRUCTURAL STUDIES OF AAV2 REP68 REVEAL A PARTIALLY JRNL TITL 2 STRUCTURED LINKER AND COMPACT DOMAIN CONFORMATION. JRNL REF BIOCHEMISTRY V. 54 5907 2015 JRNL REFN ISSN 0006-2960 JRNL PMID 26314310 JRNL DOI 10.1021/ACS.BIOCHEM.5B00610 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.72 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 50955 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.226 REMARK 3 R VALUE (WORKING SET) : 0.225 REMARK 3 FREE R VALUE : 0.242 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.990 REMARK 3 FREE R VALUE TEST SET COUNT : 2545 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.7263 - 6.0120 0.98 2923 131 0.2244 0.2185 REMARK 3 2 6.0120 - 4.7784 1.00 2789 121 0.2061 0.1882 REMARK 3 3 4.7784 - 4.1762 1.00 2723 168 0.1850 0.2260 REMARK 3 4 4.1762 - 3.7952 1.00 2695 161 0.2074 0.2186 REMARK 3 5 3.7952 - 3.5236 1.00 2695 118 0.2287 0.2455 REMARK 3 6 3.5236 - 3.3162 1.00 2725 140 0.2284 0.2741 REMARK 3 7 3.3162 - 3.1503 1.00 2702 145 0.2354 0.2739 REMARK 3 8 3.1503 - 3.0133 1.00 2640 161 0.2400 0.2257 REMARK 3 9 3.0133 - 2.8974 1.00 2676 157 0.2390 0.2543 REMARK 3 10 2.8974 - 2.7975 1.00 2642 135 0.2537 0.2497 REMARK 3 11 2.7975 - 2.7101 1.00 2698 135 0.2561 0.2867 REMARK 3 12 2.7101 - 2.6327 1.00 2666 123 0.2501 0.2525 REMARK 3 13 2.6327 - 2.5634 1.00 2633 156 0.2416 0.2948 REMARK 3 14 2.5634 - 2.5009 1.00 2670 135 0.2472 0.2657 REMARK 3 15 2.5009 - 2.4441 1.00 2620 133 0.2553 0.2827 REMARK 3 16 2.4441 - 2.3921 1.00 2702 133 0.2494 0.2818 REMARK 3 17 2.3921 - 2.3442 1.00 2634 155 0.2477 0.3054 REMARK 3 18 2.3442 - 2.3000 0.99 2577 138 0.2759 0.3414 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.260 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.022 4836 REMARK 3 ANGLE : 1.428 6595 REMARK 3 CHIRALITY : 0.157 738 REMARK 3 PLANARITY : 0.011 843 REMARK 3 DIHEDRAL : 17.010 1737 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZO0 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000209572. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JAN-11 REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50960 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.300 REMARK 200 R MERGE (I) : 0.09900 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.34 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.40200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 8.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1M55 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.89 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: ISOPROPANOL, SODIUM ACETATE, MAGNESIUM REMARK 280 ACETATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 93.18000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 77.20000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 93.18000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 77.20000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 602 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 687 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 ASN A 139 REMARK 465 GLY A 140 REMARK 465 ALA A 141 REMARK 465 GLY A 142 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 GLY B 140 REMARK 465 ALA B 141 REMARK 465 GLY B 142 REMARK 465 GLN B 202 REMARK 465 ASN B 203 REMARK 465 LYS B 204 REMARK 465 GLU B 205 REMARK 465 ASN B 206 REMARK 465 GLY C -2 REMARK 465 SER C -1 REMARK 465 GLY C 140 REMARK 465 HIS C 192 REMARK 465 LEU C 193 REMARK 465 THR C 194 REMARK 465 HIS C 195 REMARK 465 VAL C 196 REMARK 465 SER C 197 REMARK 465 GLN C 198 REMARK 465 THR C 199 REMARK 465 GLN C 200 REMARK 465 GLU C 201 REMARK 465 GLN C 202 REMARK 465 ASN C 203 REMARK 465 LYS C 204 REMARK 465 GLU C 205 REMARK 465 ASN C 206 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 1 CG SD CE REMARK 470 GLU A 32 CG CD OE1 OE2 REMARK 470 LYS A 33 CG CD CE NZ REMARK 470 GLU A 34 CG CD OE1 OE2 REMARK 470 GLU A 36 CG CD OE1 OE2 REMARK 470 ARG A 138 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 173 CG CD OE1 OE2 REMARK 470 LYS A 204 CG CD CE NZ REMARK 470 ASN A 206 CG OD1 ND2 REMARK 470 MET B 1 CG SD CE REMARK 470 GLU B 32 CG CD OE1 OE2 REMARK 470 LYS B 33 CG CD CE NZ REMARK 470 GLU B 34 CG CD OE1 OE2 REMARK 470 GLU B 66 CG CD OE1 OE2 REMARK 470 ARG B 69 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 72 CG CD CE NZ REMARK 470 GLU B 86 CG CD OE1 OE2 REMARK 470 GLU B 96 CG CD OE1 OE2 REMARK 470 LYS B 101 CG CD CE NZ REMARK 470 GLN B 111 CG CD OE1 NE2 REMARK 470 ILE B 112 CG1 CG2 CD1 REMARK 470 GLU B 114 CG CD OE1 OE2 REMARK 470 LYS B 115 CG CD CE NZ REMARK 470 ARG B 119 CG CD NE CZ NH1 NH2 REMARK 470 ILE B 124 CG1 CG2 CD1 REMARK 470 LYS B 136 CG CD CE NZ REMARK 470 ASN B 139 CG OD1 ND2 REMARK 470 LYS B 186 CG CD CE NZ REMARK 470 GLU B 201 CG CD OE1 OE2 REMARK 470 HIS C 0 CG ND1 CD2 CE1 NE2 REMARK 470 MET C 1 CG SD CE REMARK 470 GLU C 32 CG CD OE1 OE2 REMARK 470 LYS C 33 CG CD CE NZ REMARK 470 GLU C 34 CG CD OE1 OE2 REMARK 470 GLU C 36 CG CD OE1 OE2 REMARK 470 ARG C 138 CG CD NE CZ NH1 NH2 REMARK 470 ASN C 139 CG OD1 ND2 REMARK 470 LYS C 186 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 2 C - N - CD ANGL. DEV. = 13.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS B 72 5.81 84.98 REMARK 500 ARG C 119 -72.34 -95.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 ARG A 69 0.14 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 429 DISTANCE = 5.92 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 83 OE1 REMARK 620 2 HOH A 503 O 64.4 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue IPA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MG C 301 DBREF 4ZO0 A 1 206 UNP P03132 REP68_AAV2S 1 206 DBREF 4ZO0 B 1 206 UNP P03132 REP68_AAV2S 1 206 DBREF 4ZO0 C 1 206 UNP P03132 REP68_AAV2S 1 206 SEQADV 4ZO0 GLY A -2 UNP P03132 EXPRESSION TAG SEQADV 4ZO0 SER A -1 UNP P03132 EXPRESSION TAG SEQADV 4ZO0 HIS A 0 UNP P03132 EXPRESSION TAG SEQADV 4ZO0 GLU A 17 UNP P03132 GLY 17 ENGINEERED MUTATION SEQADV 4ZO0 SER A 151 UNP P03132 CYS 151 ENGINEERED MUTATION SEQADV 4ZO0 GLY B -2 UNP P03132 EXPRESSION TAG SEQADV 4ZO0 SER B -1 UNP P03132 EXPRESSION TAG SEQADV 4ZO0 HIS B 0 UNP P03132 EXPRESSION TAG SEQADV 4ZO0 GLU B 17 UNP P03132 GLY 17 ENGINEERED MUTATION SEQADV 4ZO0 SER B 151 UNP P03132 CYS 151 ENGINEERED MUTATION SEQADV 4ZO0 GLY C -2 UNP P03132 EXPRESSION TAG SEQADV 4ZO0 SER C -1 UNP P03132 EXPRESSION TAG SEQADV 4ZO0 HIS C 0 UNP P03132 EXPRESSION TAG SEQADV 4ZO0 GLU C 17 UNP P03132 GLY 17 ENGINEERED MUTATION SEQADV 4ZO0 SER C 151 UNP P03132 CYS 151 ENGINEERED MUTATION SEQRES 1 A 209 GLY SER HIS MET PRO GLY PHE TYR GLU ILE VAL ILE LYS SEQRES 2 A 209 VAL PRO SER ASP LEU ASP GLU HIS LEU PRO GLY ILE SER SEQRES 3 A 209 ASP SER PHE VAL ASN TRP VAL ALA GLU LYS GLU TRP GLU SEQRES 4 A 209 LEU PRO PRO ASP SER ASP MET ASP LEU ASN LEU ILE GLU SEQRES 5 A 209 GLN ALA PRO LEU THR VAL ALA GLU LYS LEU GLN ARG ASP SEQRES 6 A 209 PHE LEU THR GLU TRP ARG ARG VAL SER LYS ALA PRO GLU SEQRES 7 A 209 ALA LEU PHE PHE VAL GLN PHE GLU LYS GLY GLU SER TYR SEQRES 8 A 209 PHE HIS MET HIS VAL LEU VAL GLU THR THR GLY VAL LYS SEQRES 9 A 209 SER MET VAL LEU GLY ARG PHE LEU SER GLN ILE ARG GLU SEQRES 10 A 209 LYS LEU ILE GLN ARG ILE TYR ARG GLY ILE GLU PRO THR SEQRES 11 A 209 LEU PRO ASN TRP PHE ALA VAL THR LYS THR ARG ASN GLY SEQRES 12 A 209 ALA GLY GLY GLY ASN LYS VAL VAL ASP GLU SER TYR ILE SEQRES 13 A 209 PRO ASN TYR LEU LEU PRO LYS THR GLN PRO GLU LEU GLN SEQRES 14 A 209 TRP ALA TRP THR ASN MET GLU GLN TYR LEU SER ALA CYS SEQRES 15 A 209 LEU ASN LEU THR GLU ARG LYS ARG LEU VAL ALA GLN HIS SEQRES 16 A 209 LEU THR HIS VAL SER GLN THR GLN GLU GLN ASN LYS GLU SEQRES 17 A 209 ASN SEQRES 1 B 209 GLY SER HIS MET PRO GLY PHE TYR GLU ILE VAL ILE LYS SEQRES 2 B 209 VAL PRO SER ASP LEU ASP GLU HIS LEU PRO GLY ILE SER SEQRES 3 B 209 ASP SER PHE VAL ASN TRP VAL ALA GLU LYS GLU TRP GLU SEQRES 4 B 209 LEU PRO PRO ASP SER ASP MET ASP LEU ASN LEU ILE GLU SEQRES 5 B 209 GLN ALA PRO LEU THR VAL ALA GLU LYS LEU GLN ARG ASP SEQRES 6 B 209 PHE LEU THR GLU TRP ARG ARG VAL SER LYS ALA PRO GLU SEQRES 7 B 209 ALA LEU PHE PHE VAL GLN PHE GLU LYS GLY GLU SER TYR SEQRES 8 B 209 PHE HIS MET HIS VAL LEU VAL GLU THR THR GLY VAL LYS SEQRES 9 B 209 SER MET VAL LEU GLY ARG PHE LEU SER GLN ILE ARG GLU SEQRES 10 B 209 LYS LEU ILE GLN ARG ILE TYR ARG GLY ILE GLU PRO THR SEQRES 11 B 209 LEU PRO ASN TRP PHE ALA VAL THR LYS THR ARG ASN GLY SEQRES 12 B 209 ALA GLY GLY GLY ASN LYS VAL VAL ASP GLU SER TYR ILE SEQRES 13 B 209 PRO ASN TYR LEU LEU PRO LYS THR GLN PRO GLU LEU GLN SEQRES 14 B 209 TRP ALA TRP THR ASN MET GLU GLN TYR LEU SER ALA CYS SEQRES 15 B 209 LEU ASN LEU THR GLU ARG LYS ARG LEU VAL ALA GLN HIS SEQRES 16 B 209 LEU THR HIS VAL SER GLN THR GLN GLU GLN ASN LYS GLU SEQRES 17 B 209 ASN SEQRES 1 C 209 GLY SER HIS MET PRO GLY PHE TYR GLU ILE VAL ILE LYS SEQRES 2 C 209 VAL PRO SER ASP LEU ASP GLU HIS LEU PRO GLY ILE SER SEQRES 3 C 209 ASP SER PHE VAL ASN TRP VAL ALA GLU LYS GLU TRP GLU SEQRES 4 C 209 LEU PRO PRO ASP SER ASP MET ASP LEU ASN LEU ILE GLU SEQRES 5 C 209 GLN ALA PRO LEU THR VAL ALA GLU LYS LEU GLN ARG ASP SEQRES 6 C 209 PHE LEU THR GLU TRP ARG ARG VAL SER LYS ALA PRO GLU SEQRES 7 C 209 ALA LEU PHE PHE VAL GLN PHE GLU LYS GLY GLU SER TYR SEQRES 8 C 209 PHE HIS MET HIS VAL LEU VAL GLU THR THR GLY VAL LYS SEQRES 9 C 209 SER MET VAL LEU GLY ARG PHE LEU SER GLN ILE ARG GLU SEQRES 10 C 209 LYS LEU ILE GLN ARG ILE TYR ARG GLY ILE GLU PRO THR SEQRES 11 C 209 LEU PRO ASN TRP PHE ALA VAL THR LYS THR ARG ASN GLY SEQRES 12 C 209 ALA GLY GLY GLY ASN LYS VAL VAL ASP GLU SER TYR ILE SEQRES 13 C 209 PRO ASN TYR LEU LEU PRO LYS THR GLN PRO GLU LEU GLN SEQRES 14 C 209 TRP ALA TRP THR ASN MET GLU GLN TYR LEU SER ALA CYS SEQRES 15 C 209 LEU ASN LEU THR GLU ARG LYS ARG LEU VAL ALA GLN HIS SEQRES 16 C 209 LEU THR HIS VAL SER GLN THR GLN GLU GLN ASN LYS GLU SEQRES 17 C 209 ASN HET IPA A 401 4 HET MG A 402 1 HET MG B 301 1 HET MG C 301 1 HETNAM IPA ISOPROPYL ALCOHOL HETNAM MG MAGNESIUM ION HETSYN IPA 2-PROPANOL FORMUL 4 IPA C3 H8 O FORMUL 5 MG 3(MG 2+) FORMUL 8 HOH *315(H2 O) HELIX 1 AA1 ASP A 14 LEU A 19 1 6 HELIX 2 AA2 SER A 23 LYS A 33 1 11 HELIX 3 AA3 ASP A 44 ILE A 48 5 5 HELIX 4 AA4 GLU A 49 LYS A 72 1 24 HELIX 5 AA5 LYS A 101 MET A 103 5 3 HELIX 6 AA6 VAL A 104 ILE A 120 1 17 HELIX 7 AA7 SER A 151 LEU A 157 1 7 HELIX 8 AA8 MET A 172 LEU A 176 5 5 HELIX 9 AA9 ASN A 181 GLU A 205 1 25 HELIX 10 AB1 ASP B 14 LEU B 19 1 6 HELIX 11 AB2 SER B 23 GLU B 32 1 10 HELIX 12 AB3 ASP B 44 ILE B 48 5 5 HELIX 13 AB4 GLU B 49 LYS B 72 1 24 HELIX 14 AB5 VAL B 104 TYR B 121 1 18 HELIX 15 AB6 SER B 151 TYR B 156 1 6 HELIX 16 AB7 MET B 172 LEU B 176 5 5 HELIX 17 AB8 ASN B 181 GLN B 200 1 20 HELIX 18 AB9 ASP C 14 LEU C 19 1 6 HELIX 19 AC1 SER C 23 LYS C 33 1 11 HELIX 20 AC2 ASP C 44 ILE C 48 5 5 HELIX 21 AC3 GLU C 49 LYS C 72 1 24 HELIX 22 AC4 VAL C 104 ARG C 119 1 16 HELIX 23 AC5 SER C 151 LEU C 157 1 7 HELIX 24 AC6 MET C 172 LEU C 176 5 5 HELIX 25 AC7 ASN C 181 GLN C 191 1 11 SHEET 1 AA1 5 PHE A 132 VAL A 134 0 SHEET 2 AA1 5 PHE A 4 VAL A 11 -1 N VAL A 8 O ALA A 133 SHEET 3 AA1 5 PHE A 89 GLU A 96 -1 O PHE A 89 N VAL A 11 SHEET 4 AA1 5 PHE A 78 LYS A 84 -1 N GLN A 81 O HIS A 92 SHEET 5 AA1 5 LEU A 165 THR A 170 -1 O TRP A 169 N VAL A 80 SHEET 1 AA2 5 PHE B 132 VAL B 134 0 SHEET 2 AA2 5 PHE B 4 VAL B 11 -1 N VAL B 8 O ALA B 133 SHEET 3 AA2 5 PHE B 89 GLU B 96 -1 O VAL B 93 N ILE B 7 SHEET 4 AA2 5 PHE B 78 LYS B 84 -1 N GLU B 83 O HIS B 90 SHEET 5 AA2 5 LEU B 165 THR B 170 -1 O TRP B 167 N PHE B 82 SHEET 1 AA3 5 PHE C 132 VAL C 134 0 SHEET 2 AA3 5 PHE C 4 VAL C 11 -1 N VAL C 8 O ALA C 133 SHEET 3 AA3 5 PHE C 89 GLU C 96 -1 O PHE C 89 N VAL C 11 SHEET 4 AA3 5 PHE C 78 LYS C 84 -1 N GLU C 83 O HIS C 90 SHEET 5 AA3 5 LEU C 165 THR C 170 -1 O TRP C 167 N PHE C 82 LINK OE1 GLU A 83 MG MG A 402 1555 1555 2.38 LINK MG MG A 402 O HOH A 503 1555 1555 2.72 LINK OE1 GLU B 83 MG MG B 301 1555 1555 2.85 LINK OE2 GLU C 83 MG MG C 301 1555 1555 2.78 CISPEP 1 GLN A 162 PRO A 163 0 4.78 CISPEP 2 GLN B 162 PRO B 163 0 6.73 CISPEP 3 GLN C 162 PRO C 163 0 5.92 SITE 1 AC1 4 PRO A 12 SER A 13 ASP A 14 HOH A 520 SITE 1 AC2 4 GLU A 83 HIS A 90 HIS A 92 HOH A 503 SITE 1 AC3 5 GLU B 83 HIS B 90 HIS B 92 LYS B 160 SITE 2 AC3 5 HOH B 406 SITE 1 AC4 4 GLU C 83 HIS C 90 HIS C 92 LYS C 160 CRYST1 186.360 154.400 38.780 90.00 90.00 90.00 P 21 21 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005366 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006477 0.000000 0.00000 SCALE3 0.000000 0.000000 0.025786 0.00000