HEADER TRANSFERASE 06-MAY-15 4ZO4 TITLE DEPHOSPHO-COA KINASE FROM CAMPYLOBACTER JEJUNI. COMPND MOL_ID: 1; COMPND 2 MOLECULE: DEPHOSPHO-COA KINASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: DEPHOSPHOCOENZYME A KINASE; COMPND 5 EC: 2.7.1.24; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: 3 N-TERMINAL RESIDUES, SNA, ARE CLONING ARTEFACTS SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAMPYLOBACTER JEJUNI SUBSP. JEJUNI SEROTYPE O:2 SOURCE 3 (STRAIN NCTC 11168); SOURCE 4 ORGANISM_TAXID: 192222; SOURCE 5 STRAIN: NCTC 11168; SOURCE 6 GENE: COAE, CJ1530; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, IDP00325, DEPHOSPHO-COA KINASE, CENTER FOR KEYWDS 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES, CSGID, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,M.ZHOU,J.STAM,W.F.ANDERSON,A.JOACHIMIAK,CENTER FOR AUTHOR 2 STRUCTURAL GENOMICS OF INFECTIOUS DISEASES (CSGID) REVDAT 3 11-DEC-19 4ZO4 1 REMARK REVDAT 2 13-SEP-17 4ZO4 1 SOURCE KEYWDS REMARK REVDAT 1 13-MAY-15 4ZO4 0 JRNL AUTH J.OSIPIUK,M.ZHOU,J.STAM,W.F.ANDERSON,A.JOACHIMIAK, JRNL AUTH 2 CENTER FOR STRUCTURAL GENOMICS OF INFECTIOUS DISEASES JRNL AUTH 3 (CSGID) JRNL TITL DEPHOSPHO-COA KINASE FROM CAMPYLOBACTER JEJUNI. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.57 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.57 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.24 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 30323 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.211 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.278 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1627 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.57 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.63 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1946 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 88.97 REMARK 3 BIN R VALUE (WORKING SET) : 0.2850 REMARK 3 BIN FREE R VALUE SET COUNT : 126 REMARK 3 BIN FREE R VALUE : 0.3670 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6375 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 74.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 87.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 76.45000 REMARK 3 B22 (A**2) : 6.75000 REMARK 3 B33 (A**2) : -83.20000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.133 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.071 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.251 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 24.914 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.954 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.907 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6463 ; 0.011 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 6701 ; 0.004 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8621 ; 1.421 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): 15503 ; 0.764 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 785 ; 6.497 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 276 ;40.916 ;25.652 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1352 ;18.762 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 24 ;21.108 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 989 ; 0.077 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7005 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1347 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3158 ; 4.426 ; 6.196 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3157 ; 4.424 ; 6.196 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3937 ; 6.642 ; 9.290 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.581 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : K, H, -L REMARK 3 TWIN FRACTION : 0.419 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 201 REMARK 3 ORIGIN FOR THE GROUP (A): -1.0844 4.4929 -16.8531 REMARK 3 T TENSOR REMARK 3 T11: 0.2660 T22: 0.0162 REMARK 3 T33: 0.3319 T12: 0.0072 REMARK 3 T13: 0.0066 T23: -0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.8648 L22: 0.9681 REMARK 3 L33: 1.2084 L12: 0.1021 REMARK 3 L13: -0.4123 L23: -0.2791 REMARK 3 S TENSOR REMARK 3 S11: 0.0330 S12: 0.0030 S13: 0.0395 REMARK 3 S21: 0.1251 S22: 0.0413 S23: 0.0556 REMARK 3 S31: -0.1606 S32: -0.1254 S33: -0.0743 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 501 REMARK 3 ORIGIN FOR THE GROUP (A): 9.5875 -22.1242 -9.0141 REMARK 3 T TENSOR REMARK 3 T11: 0.2926 T22: 0.0172 REMARK 3 T33: 0.3925 T12: -0.0023 REMARK 3 T13: -0.0053 T23: -0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.5584 L22: 0.0533 REMARK 3 L33: 0.3693 L12: 0.0488 REMARK 3 L13: 0.3235 L23: -0.0599 REMARK 3 S TENSOR REMARK 3 S11: 0.0638 S12: -0.0861 S13: -0.0194 REMARK 3 S21: 0.0541 S22: -0.0186 S23: 0.0154 REMARK 3 S31: 0.0237 S32: -0.0241 S33: -0.0451 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 201 REMARK 3 ORIGIN FOR THE GROUP (A): -23.0204 -17.4012 -27.7940 REMARK 3 T TENSOR REMARK 3 T11: 0.2284 T22: 0.1744 REMARK 3 T33: 0.3834 T12: 0.0188 REMARK 3 T13: 0.0025 T23: 0.0351 REMARK 3 L TENSOR REMARK 3 L11: 0.4935 L22: 0.4505 REMARK 3 L33: 1.0999 L12: 0.3539 REMARK 3 L13: -0.2928 L23: 0.0305 REMARK 3 S TENSOR REMARK 3 S11: 0.0157 S12: 0.1267 S13: 0.0051 REMARK 3 S21: 0.0147 S22: 0.0073 S23: 0.0935 REMARK 3 S31: -0.0462 S32: -0.4353 S33: -0.0230 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 0 D 501 REMARK 3 ORIGIN FOR THE GROUP (A): 3.5617 -28.1081 -35.6278 REMARK 3 T TENSOR REMARK 3 T11: 0.2714 T22: 0.0398 REMARK 3 T33: 0.3756 T12: -0.0208 REMARK 3 T13: -0.0150 T23: -0.0268 REMARK 3 L TENSOR REMARK 3 L11: 0.5852 L22: 0.6498 REMARK 3 L33: 0.3611 L12: -0.3383 REMARK 3 L13: 0.0722 L23: 0.2121 REMARK 3 S TENSOR REMARK 3 S11: -0.0305 S12: 0.0904 S13: -0.0049 REMARK 3 S21: 0.0107 S22: 0.0350 S23: -0.0178 REMARK 3 S31: 0.0140 S32: 0.0181 S33: -0.0044 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 4ZO4 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000209605. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-3000 REMARK 200 DATA SCALING SOFTWARE : HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32010 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.570 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.900 REMARK 200 R MERGE (I) : 0.09100 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.57 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.79900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.150 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.49 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.59 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2 M SODIUM/POTASSIUM PHOSPHATE BUFFER, REMARK 280 0.1 M PHOSPHATE CITRATE BUFFER, PH 4.2, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 36.90750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 89.24650 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.01600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 89.24650 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 36.90750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.01600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 38090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -55.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 PHE B 119 REMARK 465 GLU B 120 REMARK 465 SER B 121 REMARK 465 GLY B 122 REMARK 465 ALA B 123 REMARK 465 TYR B 124 REMARK 465 ASN B 200 REMARK 465 MSE B 201 REMARK 465 SER C -2 REMARK 465 ASN C -1 REMARK 465 ALA C 0 REMARK 465 SER D -2 REMARK 465 ASN D -1 REMARK 465 PHE D 119 REMARK 465 GLU D 120 REMARK 465 SER D 121 REMARK 465 GLY D 122 REMARK 465 ALA D 123 REMARK 465 TYR D 124 REMARK 465 ASN D 200 REMARK 465 MSE D 201 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 43 50.45 -115.15 REMARK 500 LYS A 62 -110.28 -150.87 REMARK 500 PHE A 118 49.59 -102.87 REMARK 500 SER A 121 15.20 -66.21 REMARK 500 GLN A 146 -72.85 -54.91 REMARK 500 LYS A 170 -18.02 -43.51 REMARK 500 ASN A 178 49.41 -165.58 REMARK 500 ASN A 180 -159.31 -93.69 REMARK 500 LYS B 64 57.82 27.49 REMARK 500 ALA B 172 154.53 -43.47 REMARK 500 THR B 179 -134.48 -49.08 REMARK 500 LYS B 198 -70.13 -97.09 REMARK 500 ALA C 22 -37.39 -38.15 REMARK 500 LEU C 25 20.80 -74.45 REMARK 500 ALA C 32 -36.13 -38.99 REMARK 500 GLU C 63 49.01 32.97 REMARK 500 LYS C 64 40.79 73.19 REMARK 500 ASN C 108 19.51 59.09 REMARK 500 SER C 121 3.49 -64.48 REMARK 500 LEU C 139 37.14 -98.47 REMARK 500 ARG C 147 -73.89 -60.71 REMARK 500 LYS C 149 72.21 63.73 REMARK 500 ASN C 180 -166.66 -127.09 REMARK 500 LEU D 56 42.92 -106.22 REMARK 500 LYS D 62 143.36 177.33 REMARK 500 GLU D 138 108.77 -45.07 REMARK 500 LYS D 149 72.50 51.69 REMARK 500 SER D 151 -169.95 -71.45 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLU D 125 ASN D 126 146.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BME B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue BME D 501 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CSGID-IDP00325 RELATED DB: TARGETTRACK DBREF 4ZO4 A 2 201 UNP Q9PMD9 COAE_CAMJE 2 201 DBREF 4ZO4 B 2 201 UNP Q9PMD9 COAE_CAMJE 2 201 DBREF 4ZO4 C 2 201 UNP Q9PMD9 COAE_CAMJE 2 201 DBREF 4ZO4 D 2 201 UNP Q9PMD9 COAE_CAMJE 2 201 SEQADV 4ZO4 SER A -2 UNP Q9PMD9 EXPRESSION TAG SEQADV 4ZO4 ASN A -1 UNP Q9PMD9 EXPRESSION TAG SEQADV 4ZO4 ALA A 0 UNP Q9PMD9 EXPRESSION TAG SEQADV 4ZO4 MSE A 1 UNP Q9PMD9 EXPRESSION TAG SEQADV 4ZO4 SER B -2 UNP Q9PMD9 EXPRESSION TAG SEQADV 4ZO4 ASN B -1 UNP Q9PMD9 EXPRESSION TAG SEQADV 4ZO4 ALA B 0 UNP Q9PMD9 EXPRESSION TAG SEQADV 4ZO4 MSE B 1 UNP Q9PMD9 EXPRESSION TAG SEQADV 4ZO4 SER C -2 UNP Q9PMD9 EXPRESSION TAG SEQADV 4ZO4 ASN C -1 UNP Q9PMD9 EXPRESSION TAG SEQADV 4ZO4 ALA C 0 UNP Q9PMD9 EXPRESSION TAG SEQADV 4ZO4 MSE C 1 UNP Q9PMD9 EXPRESSION TAG SEQADV 4ZO4 SER D -2 UNP Q9PMD9 EXPRESSION TAG SEQADV 4ZO4 ASN D -1 UNP Q9PMD9 EXPRESSION TAG SEQADV 4ZO4 ALA D 0 UNP Q9PMD9 EXPRESSION TAG SEQADV 4ZO4 MSE D 1 UNP Q9PMD9 EXPRESSION TAG SEQRES 1 A 204 SER ASN ALA MSE LYS ASN ALA PHE PHE VAL THR ALA SER SEQRES 2 A 204 ILE ALA CYS GLY LYS SER THR PHE ILE GLU ILE ALA ASN SEQRES 3 A 204 SER LEU GLY PHE LYS SER ILE SER ALA ASP LYS ILE ALA SEQRES 4 A 204 HIS LYS ILE LEU ASP GLU ASN ALA LEU GLU LEU GLU LYS SEQRES 5 A 204 ILE PHE SER PRO PHE SER LEU LYS ASN LEU LEU LYS LYS SEQRES 6 A 204 GLU LYS LYS ILE ASP ARG LYS ILE LEU GLY GLU ILE VAL SEQRES 7 A 204 PHE ASN ASN LYS GLU ALA LYS LYS ILE LEU GLU ASN PHE SEQRES 8 A 204 THR HIS PRO LYS ILE ARG ALA LYS ILE LEU GLU GLN MSE SEQRES 9 A 204 GLN ILE LEU ASP LYS GLU ASN LYS ALA PHE PHE VAL GLU SEQRES 10 A 204 ILE PRO LEU PHE PHE GLU SER GLY ALA TYR GLU ASN LEU SEQRES 11 A 204 GLY LYS VAL ILE VAL ILE TYR THR PRO LYS GLU LEU SER SEQRES 12 A 204 LEU LYS ARG ILE MSE GLN ARG ASP LYS LEU SER LEU GLU SEQRES 13 A 204 ALA ALA LYS ALA ARG LEU ASP SER GLN ILE ASP ILE GLU SEQRES 14 A 204 GLU LYS LEU LYS LYS ALA ASP PHE ILE ILE LYS ASN THR SEQRES 15 A 204 ASN SER TYR ALA ASP PHE ARG GLN GLU CYS VAL LYS VAL SEQRES 16 A 204 ILE GLN GLU ILE SER LYS GLY ASN MSE SEQRES 1 B 204 SER ASN ALA MSE LYS ASN ALA PHE PHE VAL THR ALA SER SEQRES 2 B 204 ILE ALA CYS GLY LYS SER THR PHE ILE GLU ILE ALA ASN SEQRES 3 B 204 SER LEU GLY PHE LYS SER ILE SER ALA ASP LYS ILE ALA SEQRES 4 B 204 HIS LYS ILE LEU ASP GLU ASN ALA LEU GLU LEU GLU LYS SEQRES 5 B 204 ILE PHE SER PRO PHE SER LEU LYS ASN LEU LEU LYS LYS SEQRES 6 B 204 GLU LYS LYS ILE ASP ARG LYS ILE LEU GLY GLU ILE VAL SEQRES 7 B 204 PHE ASN ASN LYS GLU ALA LYS LYS ILE LEU GLU ASN PHE SEQRES 8 B 204 THR HIS PRO LYS ILE ARG ALA LYS ILE LEU GLU GLN MSE SEQRES 9 B 204 GLN ILE LEU ASP LYS GLU ASN LYS ALA PHE PHE VAL GLU SEQRES 10 B 204 ILE PRO LEU PHE PHE GLU SER GLY ALA TYR GLU ASN LEU SEQRES 11 B 204 GLY LYS VAL ILE VAL ILE TYR THR PRO LYS GLU LEU SER SEQRES 12 B 204 LEU LYS ARG ILE MSE GLN ARG ASP LYS LEU SER LEU GLU SEQRES 13 B 204 ALA ALA LYS ALA ARG LEU ASP SER GLN ILE ASP ILE GLU SEQRES 14 B 204 GLU LYS LEU LYS LYS ALA ASP PHE ILE ILE LYS ASN THR SEQRES 15 B 204 ASN SER TYR ALA ASP PHE ARG GLN GLU CYS VAL LYS VAL SEQRES 16 B 204 ILE GLN GLU ILE SER LYS GLY ASN MSE SEQRES 1 C 204 SER ASN ALA MSE LYS ASN ALA PHE PHE VAL THR ALA SER SEQRES 2 C 204 ILE ALA CYS GLY LYS SER THR PHE ILE GLU ILE ALA ASN SEQRES 3 C 204 SER LEU GLY PHE LYS SER ILE SER ALA ASP LYS ILE ALA SEQRES 4 C 204 HIS LYS ILE LEU ASP GLU ASN ALA LEU GLU LEU GLU LYS SEQRES 5 C 204 ILE PHE SER PRO PHE SER LEU LYS ASN LEU LEU LYS LYS SEQRES 6 C 204 GLU LYS LYS ILE ASP ARG LYS ILE LEU GLY GLU ILE VAL SEQRES 7 C 204 PHE ASN ASN LYS GLU ALA LYS LYS ILE LEU GLU ASN PHE SEQRES 8 C 204 THR HIS PRO LYS ILE ARG ALA LYS ILE LEU GLU GLN MSE SEQRES 9 C 204 GLN ILE LEU ASP LYS GLU ASN LYS ALA PHE PHE VAL GLU SEQRES 10 C 204 ILE PRO LEU PHE PHE GLU SER GLY ALA TYR GLU ASN LEU SEQRES 11 C 204 GLY LYS VAL ILE VAL ILE TYR THR PRO LYS GLU LEU SER SEQRES 12 C 204 LEU LYS ARG ILE MSE GLN ARG ASP LYS LEU SER LEU GLU SEQRES 13 C 204 ALA ALA LYS ALA ARG LEU ASP SER GLN ILE ASP ILE GLU SEQRES 14 C 204 GLU LYS LEU LYS LYS ALA ASP PHE ILE ILE LYS ASN THR SEQRES 15 C 204 ASN SER TYR ALA ASP PHE ARG GLN GLU CYS VAL LYS VAL SEQRES 16 C 204 ILE GLN GLU ILE SER LYS GLY ASN MSE SEQRES 1 D 204 SER ASN ALA MSE LYS ASN ALA PHE PHE VAL THR ALA SER SEQRES 2 D 204 ILE ALA CYS GLY LYS SER THR PHE ILE GLU ILE ALA ASN SEQRES 3 D 204 SER LEU GLY PHE LYS SER ILE SER ALA ASP LYS ILE ALA SEQRES 4 D 204 HIS LYS ILE LEU ASP GLU ASN ALA LEU GLU LEU GLU LYS SEQRES 5 D 204 ILE PHE SER PRO PHE SER LEU LYS ASN LEU LEU LYS LYS SEQRES 6 D 204 GLU LYS LYS ILE ASP ARG LYS ILE LEU GLY GLU ILE VAL SEQRES 7 D 204 PHE ASN ASN LYS GLU ALA LYS LYS ILE LEU GLU ASN PHE SEQRES 8 D 204 THR HIS PRO LYS ILE ARG ALA LYS ILE LEU GLU GLN MSE SEQRES 9 D 204 GLN ILE LEU ASP LYS GLU ASN LYS ALA PHE PHE VAL GLU SEQRES 10 D 204 ILE PRO LEU PHE PHE GLU SER GLY ALA TYR GLU ASN LEU SEQRES 11 D 204 GLY LYS VAL ILE VAL ILE TYR THR PRO LYS GLU LEU SER SEQRES 12 D 204 LEU LYS ARG ILE MSE GLN ARG ASP LYS LEU SER LEU GLU SEQRES 13 D 204 ALA ALA LYS ALA ARG LEU ASP SER GLN ILE ASP ILE GLU SEQRES 14 D 204 GLU LYS LEU LYS LYS ALA ASP PHE ILE ILE LYS ASN THR SEQRES 15 D 204 ASN SER TYR ALA ASP PHE ARG GLN GLU CYS VAL LYS VAL SEQRES 16 D 204 ILE GLN GLU ILE SER LYS GLY ASN MSE MODRES 4ZO4 MSE A 101 MET MODIFIED RESIDUE MODRES 4ZO4 MSE A 145 MET MODIFIED RESIDUE MODRES 4ZO4 MSE A 201 MET MODIFIED RESIDUE MODRES 4ZO4 MSE B 101 MET MODIFIED RESIDUE MODRES 4ZO4 MSE B 145 MET MODIFIED RESIDUE MODRES 4ZO4 MSE C 101 MET MODIFIED RESIDUE MODRES 4ZO4 MSE C 145 MET MODIFIED RESIDUE MODRES 4ZO4 MSE C 201 MET MODIFIED RESIDUE MODRES 4ZO4 MSE D 101 MET MODIFIED RESIDUE MODRES 4ZO4 MSE D 145 MET MODIFIED RESIDUE HET MSE A 1 8 HET MSE A 101 8 HET MSE A 145 8 HET MSE A 201 9 HET MSE B 1 8 HET MSE B 101 8 HET MSE B 145 8 HET MSE C 1 8 HET MSE C 101 8 HET MSE C 145 8 HET MSE C 201 9 HET MSE D 1 8 HET MSE D 101 8 HET MSE D 145 8 HET BME B 501 4 HET BME D 501 4 HETNAM MSE SELENOMETHIONINE HETNAM BME BETA-MERCAPTOETHANOL FORMUL 1 MSE 14(C5 H11 N O2 SE) FORMUL 5 BME 2(C2 H6 O S) HELIX 1 AA1 ILE A 11 LEU A 25 1 15 HELIX 2 AA2 ALA A 32 ASN A 43 1 12 HELIX 3 AA3 ASN A 43 SER A 52 1 10 HELIX 4 AA4 PRO A 53 SER A 55 5 3 HELIX 5 AA5 ASP A 67 ASN A 78 1 12 HELIX 6 AA6 ASN A 78 GLU A 107 1 30 HELIX 7 AA7 ALA A 123 LEU A 127 5 5 HELIX 8 AA8 SER A 140 LYS A 149 1 10 HELIX 9 AA9 SER A 151 LYS A 170 1 20 HELIX 10 AB1 SER A 181 LYS A 198 1 18 HELIX 11 AB2 ILE B 11 LEU B 25 1 15 HELIX 12 AB3 ALA B 32 ASN B 43 1 12 HELIX 13 AB4 ASN B 43 SER B 52 1 10 HELIX 14 AB5 PRO B 53 SER B 55 5 3 HELIX 15 AB6 ASP B 67 PHE B 76 1 10 HELIX 16 AB7 ASN B 78 GLU B 107 1 30 HELIX 17 AB8 SER B 140 LYS B 149 1 10 HELIX 18 AB9 SER B 151 LYS B 170 1 20 HELIX 19 AC1 SER B 181 LYS B 198 1 18 HELIX 20 AC2 ILE C 11 LEU C 25 1 15 HELIX 21 AC3 ALA C 32 ASN C 43 1 12 HELIX 22 AC4 ASN C 43 SER C 52 1 10 HELIX 23 AC5 PRO C 53 SER C 55 5 3 HELIX 24 AC6 ASP C 67 ASN C 78 1 12 HELIX 25 AC7 ASN C 78 LYS C 106 1 29 HELIX 26 AC8 ALA C 123 LEU C 127 5 5 HELIX 27 AC9 SER C 140 LYS C 149 1 10 HELIX 28 AD1 SER C 151 LYS C 170 1 20 HELIX 29 AD2 SER C 181 LYS C 198 1 18 HELIX 30 AD3 ILE D 11 LEU D 25 1 15 HELIX 31 AD4 ALA D 32 ASN D 43 1 12 HELIX 32 AD5 ASN D 43 SER D 52 1 10 HELIX 33 AD6 ASP D 67 PHE D 76 1 10 HELIX 34 AD7 ASN D 78 LYS D 106 1 29 HELIX 35 AD8 SER D 140 LYS D 149 1 10 HELIX 36 AD9 SER D 151 LYS D 170 1 20 HELIX 37 AE1 SER D 181 GLY D 199 1 19 SHEET 1 AA1 5 LYS A 28 SER A 31 0 SHEET 2 AA1 5 PHE A 111 GLU A 114 1 O PHE A 112 N LYS A 28 SHEET 3 AA1 5 ALA A 4 ALA A 9 1 N PHE A 5 O VAL A 113 SHEET 4 AA1 5 LYS A 129 ILE A 133 1 O LYS A 129 N PHE A 6 SHEET 5 AA1 5 PHE A 174 ILE A 176 1 O PHE A 174 N VAL A 132 SHEET 1 AA2 5 SER B 29 SER B 31 0 SHEET 2 AA2 5 PHE B 111 GLU B 114 1 O GLU B 114 N ILE B 30 SHEET 3 AA2 5 ALA B 4 ALA B 9 1 N PHE B 5 O VAL B 113 SHEET 4 AA2 5 LYS B 129 TYR B 134 1 O LYS B 129 N PHE B 6 SHEET 5 AA2 5 PHE B 174 LYS B 177 1 O PHE B 174 N VAL B 132 SHEET 1 AA3 5 LYS C 28 SER C 31 0 SHEET 2 AA3 5 PHE C 111 GLU C 114 1 O GLU C 114 N ILE C 30 SHEET 3 AA3 5 ALA C 4 ALA C 9 1 N VAL C 7 O VAL C 113 SHEET 4 AA3 5 LYS C 129 TYR C 134 1 O ILE C 131 N THR C 8 SHEET 5 AA3 5 PHE C 174 LYS C 177 1 O PHE C 174 N VAL C 130 SHEET 1 AA4 2 LEU C 60 LYS C 62 0 SHEET 2 AA4 2 LYS C 65 ILE C 66 -1 O LYS C 65 N LYS C 61 SHEET 1 AA5 5 SER D 29 SER D 31 0 SHEET 2 AA5 5 PHE D 111 GLU D 114 1 O GLU D 114 N ILE D 30 SHEET 3 AA5 5 ALA D 4 ALA D 9 1 N PHE D 5 O VAL D 113 SHEET 4 AA5 5 LYS D 129 TYR D 134 1 O ILE D 131 N PHE D 6 SHEET 5 AA5 5 PHE D 174 LYS D 177 1 O ILE D 176 N TYR D 134 SHEET 1 AA6 2 LEU D 60 LYS D 62 0 SHEET 2 AA6 2 LYS D 65 ILE D 66 -1 O LYS D 65 N LYS D 61 LINK C ALA A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N LYS A 2 1555 1555 1.33 LINK C GLN A 100 N MSE A 101 1555 1555 1.33 LINK C MSE A 101 N GLN A 102 1555 1555 1.33 LINK C ILE A 144 N MSE A 145 1555 1555 1.33 LINK C MSE A 145 N GLN A 146 1555 1555 1.34 LINK C ASN A 200 N MSE A 201 1555 1555 1.33 LINK C ALA B 0 N MSE B 1 1555 1555 1.33 LINK C MSE B 1 N LYS B 2 1555 1555 1.33 LINK C GLN B 100 N MSE B 101 1555 1555 1.34 LINK C MSE B 101 N GLN B 102 1555 1555 1.32 LINK C ILE B 144 N MSE B 145 1555 1555 1.33 LINK C MSE B 145 N GLN B 146 1555 1555 1.33 LINK C MSE C 1 N LYS C 2 1555 1555 1.34 LINK C GLN C 100 N MSE C 101 1555 1555 1.33 LINK C MSE C 101 N GLN C 102 1555 1555 1.33 LINK C ILE C 144 N MSE C 145 1555 1555 1.34 LINK C MSE C 145 N GLN C 146 1555 1555 1.33 LINK C ASN C 200 N MSE C 201 1555 1555 1.34 LINK C ALA D 0 N MSE D 1 1555 1555 1.34 LINK C MSE D 1 N LYS D 2 1555 1555 1.32 LINK C GLN D 100 N MSE D 101 1555 1555 1.33 LINK C MSE D 101 N GLN D 102 1555 1555 1.33 LINK C ILE D 144 N MSE D 145 1555 1555 1.33 LINK C MSE D 145 N GLN D 146 1555 1555 1.32 SITE 1 AC1 2 CYS B 13 ASN B 178 SITE 1 AC2 2 CYS D 13 ASN D 178 CRYST1 73.815 74.032 178.493 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013547 0.000000 0.000000 0.00000 SCALE2 0.000000 0.013508 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005602 0.00000