HEADER CELL ADHESION 08-MAY-15 4ZPO TITLE CRYSTAL STRUCTURE OF PROTOCADHERIN GAMMA C5 EC1-3 COMPND MOL_ID: 1; COMPND 2 MOLECULE: MCG133388, ISOFORM CRA_F; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 30-345; COMPND 5 SYNONYM: PCDHGC5 PROTEIN,PROTEIN PCDHGC5,PROTOCADHERIN GAMMA C-V, COMPND 6 PROTOCADHERIN GAMMA C5,PROTOCADHERIN GAMMA SUBFAMILY C,5; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 GENE: PCDHGC5, MCG_133388; SOURCE 6 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 7 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: HEK293 KEYWDS CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR H.N.WOLCOTT,K.M.GOODMAN,F.BAHNA,S.MANNEPALLI,R.RUBINSTEIN,B.HONIG, AUTHOR 2 L.SHAPIRO REVDAT 3 29-JUL-20 4ZPO 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 04-NOV-15 4ZPO 1 JRNL REVDAT 1 28-OCT-15 4ZPO 0 JRNL AUTH R.RUBINSTEIN,C.A.THU,K.M.GOODMAN,H.N.WOLCOTT,F.BAHNA, JRNL AUTH 2 S.MANNEPALLI,G.AHLSEN,M.CHEVEE,A.HALIM,H.CLAUSEN,T.MANIATIS, JRNL AUTH 3 L.SHAPIRO,B.HONIG JRNL TITL MOLECULAR LOGIC OF NEURONAL SELF-RECOGNITION THROUGH JRNL TITL 2 PROTOCADHERIN DOMAIN INTERACTIONS. JRNL REF CELL V. 163 629 2015 JRNL REFN ISSN 1097-4172 JRNL PMID 26478182 JRNL DOI 10.1016/J.CELL.2015.09.026 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.06 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.320 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 13086 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.222 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.180 REMARK 3 FREE R VALUE TEST SET COUNT : 678 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 30.0657 - 4.9531 1.00 2675 130 0.1986 0.1857 REMARK 3 2 4.9531 - 3.9342 1.00 2507 162 0.1952 0.2347 REMARK 3 3 3.9342 - 3.4377 1.00 2498 124 0.2508 0.3057 REMARK 3 4 3.4377 - 3.1238 1.00 2469 119 0.2709 0.3583 REMARK 3 5 3.1238 - 2.9001 0.92 2259 143 0.2614 0.2768 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.230 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.002 2451 REMARK 3 ANGLE : 0.514 3345 REMARK 3 CHIRALITY : 0.022 403 REMARK 3 PLANARITY : 0.002 441 REMARK 3 DIHEDRAL : 11.639 917 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND RESID 1 THROUGH 97 REMARK 3 ORIGIN FOR THE GROUP (A): 33.8527 4.7415 55.7574 REMARK 3 T TENSOR REMARK 3 T11: 0.4623 T22: 0.5463 REMARK 3 T33: 1.3509 T12: -0.0588 REMARK 3 T13: -0.1213 T23: 0.1998 REMARK 3 L TENSOR REMARK 3 L11: 6.9033 L22: 1.4518 REMARK 3 L33: 1.9104 L12: -1.3144 REMARK 3 L13: -0.2673 L23: -0.5786 REMARK 3 S TENSOR REMARK 3 S11: -0.0458 S12: -0.5402 S13: -1.1511 REMARK 3 S21: 0.2969 S22: -0.0821 S23: -0.5309 REMARK 3 S31: 0.1459 S32: 0.3543 S33: 0.1413 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND RESID 98 THROUGH 206 REMARK 3 ORIGIN FOR THE GROUP (A): -10.6064 8.2007 53.0265 REMARK 3 T TENSOR REMARK 3 T11: 0.3811 T22: 0.5019 REMARK 3 T33: 0.9924 T12: -0.0050 REMARK 3 T13: 0.0261 T23: -0.0020 REMARK 3 L TENSOR REMARK 3 L11: 8.3548 L22: 2.6651 REMARK 3 L33: 0.8085 L12: 1.1305 REMARK 3 L13: 0.2042 L23: 0.7366 REMARK 3 S TENSOR REMARK 3 S11: 0.1851 S12: -0.6424 S13: -0.3126 REMARK 3 S21: 0.0753 S22: -0.0482 S23: 0.1003 REMARK 3 S31: 0.0785 S32: -0.1441 S33: -0.1499 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND RESID 207 THROUGH 311 REMARK 3 ORIGIN FOR THE GROUP (A): -58.0407 8.5411 39.0011 REMARK 3 T TENSOR REMARK 3 T11: 0.4875 T22: 0.4733 REMARK 3 T33: 1.3415 T12: -0.0551 REMARK 3 T13: 0.0667 T23: -0.0247 REMARK 3 L TENSOR REMARK 3 L11: 4.3912 L22: 3.3139 REMARK 3 L33: 6.1035 L12: 0.7914 REMARK 3 L13: 4.3999 L23: 2.4683 REMARK 3 S TENSOR REMARK 3 S11: -0.1307 S12: -0.1906 S13: -0.5081 REMARK 3 S21: -0.0671 S22: -0.0225 S23: 0.3975 REMARK 3 S31: -0.1155 S32: -0.3449 S33: 0.1055 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZPO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000209671. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-AUG-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 13086 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 30.064 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 14.20 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 14.70 REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MIR REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 69.59 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 40% (V/V) MPD, 5% (W/V) PEG 8000, REMARK 280 100MM SODIUM CACODYLATE, PH 6, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.30700 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 54.31850 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 54.31850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 72.46050 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 54.31850 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 54.31850 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 24.15350 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 54.31850 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.31850 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 72.46050 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 54.31850 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.31850 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 24.15350 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 48.30700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 514 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 515 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 312 REMARK 465 ASP A 313 REMARK 465 ALA A 314 REMARK 465 ASN A 315 REMARK 465 ASP A 316 REMARK 465 HIS A 317 REMARK 465 HIS A 318 REMARK 465 HIS A 319 REMARK 465 HIS A 320 REMARK 465 HIS A 321 REMARK 465 HIS A 322 REMARK 465 HIS A 323 REMARK 465 HIS A 324 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 154 CG CD CE NZ REMARK 470 PHE A 281 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 282 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 34 71.71 53.69 REMARK 500 VAL A 51 -64.72 -91.88 REMARK 500 HIS A 83 76.64 53.44 REMARK 500 LEU A 85 97.12 -64.45 REMARK 500 HIS A 148 -32.52 -130.48 REMARK 500 LYS A 157 -104.84 58.90 REMARK 500 ASN A 207 83.26 -66.11 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 405 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 8 OE1 REMARK 620 2 GLU A 64 OE1 105.0 REMARK 620 3 GLU A 64 OE2 91.2 51.4 REMARK 620 4 ASP A 96 OD1 87.3 80.3 129.4 REMARK 620 5 LEU A 97 O 94.8 143.6 159.8 70.3 REMARK 620 6 ASP A 99 OD1 88.1 141.0 92.6 137.8 68.3 REMARK 620 7 ASP A 132 OD1 177.9 76.6 88.9 94.2 84.4 89.8 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 406 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 8 OE2 REMARK 620 2 GLU A 9 OE2 69.0 REMARK 620 3 ASP A 62 OD1 75.1 68.8 REMARK 620 4 GLU A 64 OE2 67.5 134.7 88.5 REMARK 620 5 ASP A 99 OD2 94.7 77.5 146.3 117.6 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 404 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 98 OD1 REMARK 620 2 ASN A 100 O 109.1 REMARK 620 3 ASP A 130 OD1 154.2 83.4 REMARK 620 4 ASP A 130 OD2 147.1 92.7 49.1 REMARK 620 5 ASP A 132 OD2 75.2 86.9 83.3 131.9 REMARK 620 6 ASN A 136 O 78.9 170.9 90.9 78.2 99.5 REMARK 620 7 ASP A 187 OD2 86.1 86.2 117.9 70.7 156.7 90.2 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 115 OE2 REMARK 620 2 ASP A 172 OD1 69.7 REMARK 620 3 ASP A 208 OD2 95.3 109.4 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 403 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 115 OE1 REMARK 620 2 GLU A 174 OE1 110.0 REMARK 620 3 GLU A 174 OE2 87.2 45.0 REMARK 620 4 ASP A 205 OD1 84.1 94.2 131.1 REMARK 620 5 VAL A 206 O 80.5 169.3 136.8 88.8 REMARK 620 6 ASP A 208 OD1 68.0 115.3 71.0 144.5 66.0 REMARK 620 7 ASP A 241 OD1 168.8 68.8 84.5 107.0 100.5 102.0 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 207 OD1 REMARK 620 2 ASN A 209 O 68.4 REMARK 620 3 ASP A 239 OD1 157.7 119.0 REMARK 620 4 ASP A 239 OD2 149.6 87.3 51.2 REMARK 620 5 ASP A 241 OD2 69.6 82.9 89.8 127.0 REMARK 620 6 ASN A 245 O 106.0 173.3 67.6 96.7 98.9 REMARK 620 7 ASP A 295 OD2 72.4 101.3 122.6 96.0 136.9 72.9 REMARK 620 N 1 2 3 4 5 6 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ZPL RELATED DB: PDB REMARK 900 RELATED ID: 4ZPM RELATED DB: PDB REMARK 900 RELATED ID: 4ZPN RELATED DB: PDB REMARK 900 RELATED ID: 4ZPP RELATED DB: PDB REMARK 900 RELATED ID: 4ZPQ RELATED DB: PDB REMARK 900 RELATED ID: 4ZPS RELATED DB: PDB DBREF 4ZPO A 1 316 UNP Q91XW9 Q91XW9_MOUSE 30 345 SEQADV 4ZPO HIS A 317 UNP Q91XW9 EXPRESSION TAG SEQADV 4ZPO HIS A 318 UNP Q91XW9 EXPRESSION TAG SEQADV 4ZPO HIS A 319 UNP Q91XW9 EXPRESSION TAG SEQADV 4ZPO HIS A 320 UNP Q91XW9 EXPRESSION TAG SEQADV 4ZPO HIS A 321 UNP Q91XW9 EXPRESSION TAG SEQADV 4ZPO HIS A 322 UNP Q91XW9 EXPRESSION TAG SEQADV 4ZPO HIS A 323 UNP Q91XW9 EXPRESSION TAG SEQADV 4ZPO HIS A 324 UNP Q91XW9 EXPRESSION TAG SEQRES 1 A 324 GLN LEU ARG TYR SER VAL VAL GLU GLU SER GLU PRO GLY SEQRES 2 A 324 THR LEU VAL GLY ASN VAL ALA GLN ASP LEU GLY LEU LYS SEQRES 3 A 324 GLY THR ASP LEU LEU SER ARG ARG LEU ARG LEU GLY SER SEQRES 4 A 324 GLU GLU ASN GLY ARG TYR PHE SER LEU SER LEU VAL SER SEQRES 5 A 324 GLY ALA LEU ALA VAL SER GLN LYS ILE ASP ARG GLU SER SEQRES 6 A 324 LEU CYS GLY ALA SER THR SER CYS LEU LEU PRO VAL GLN SEQRES 7 A 324 VAL VAL THR GLU HIS PRO LEU GLU LEU THR ARG VAL GLU SEQRES 8 A 324 VAL GLU ILE LEU ASP LEU ASN ASP ASN SER PRO SER PHE SEQRES 9 A 324 ALA THR PRO ASP ARG GLU MET ARG ILE SER GLU SER ALA SEQRES 10 A 324 ALA PRO GLY ALA ARG PHE PRO LEU ASP SER ALA GLN ASP SEQRES 11 A 324 PRO ASP VAL GLY THR ASN THR VAL SER PHE TYR THR LEU SEQRES 12 A 324 SER PRO ASN SER HIS PHE SER LEU HIS VAL LYS THR LEU SEQRES 13 A 324 LYS ASP GLY LYS LEU PHE PRO GLU LEU VAL LEU GLU GLN SEQRES 14 A 324 GLN LEU ASP ARG GLU THR GLN ALA ARG HIS GLN LEU VAL SEQRES 15 A 324 LEU THR ALA VAL ASP GLY GLY THR PRO ALA ARG SER GLY SEQRES 16 A 324 THR SER LEU ILE SER VAL ILE VAL LEU ASP VAL ASN ASP SEQRES 17 A 324 ASN ALA PRO THR PHE GLN SER SER VAL LEU ARG VAL GLY SEQRES 18 A 324 LEU PRO GLU ASN THR PRO PRO GLY THR LEU LEU LEU ARG SEQRES 19 A 324 LEU ASN ALA THR ASP PRO ASP GLU GLY THR ASN GLY GLN SEQRES 20 A 324 LEU ASP TYR SER PHE GLY ASP HIS THR SER GLU THR VAL SEQRES 21 A 324 LYS ASN LEU PHE GLY LEU ASP PRO SER SER GLY ALA ILE SEQRES 22 A 324 HIS VAL LEU GLY PRO VAL ASP PHE GLU GLU SER ASN PHE SEQRES 23 A 324 TYR GLU ILE HIS ALA ARG ALA ARG ASP GLN GLY GLN PRO SEQRES 24 A 324 ALA MET GLU GLY HIS CYS VAL ILE GLN VAL ASP VAL GLY SEQRES 25 A 324 ASP ALA ASN ASP HIS HIS HIS HIS HIS HIS HIS HIS HET NAG B 1 14 HET FUC B 2 10 HET CA A 401 1 HET CA A 402 1 HET CA A 403 1 HET CA A 404 1 HET CA A 405 1 HET CA A 406 1 HET MAN A 409 11 HET MAN A 410 11 HET MPD A 411 8 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM CA CALCIUM ION HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM MPD (4S)-2-METHYL-2,4-PENTANEDIOL FORMUL 2 NAG C8 H15 N O6 FORMUL 2 FUC C6 H12 O5 FORMUL 3 CA 6(CA 2+) FORMUL 9 MAN 2(C6 H12 O6) FORMUL 11 MPD C6 H14 O2 FORMUL 12 HOH *15(H2 O) HELIX 1 AA1 THR A 28 ARG A 33 1 6 HELIX 2 AA2 GLU A 41 ARG A 44 5 4 HELIX 3 AA3 ASP A 62 CYS A 67 1 6 HELIX 4 AA4 GLU A 242 GLY A 246 5 5 HELIX 5 AA5 SER A 257 LEU A 263 1 7 SHEET 1 AA1 4 LEU A 2 VAL A 7 0 SHEET 2 AA1 4 GLU A 86 LEU A 95 1 O GLU A 91 N LEU A 2 SHEET 3 AA1 4 LEU A 74 THR A 81 -1 N VAL A 79 O THR A 88 SHEET 4 AA1 4 ARG A 36 LEU A 37 -1 N ARG A 36 O VAL A 80 SHEET 1 AA2 3 LEU A 15 ASN A 18 0 SHEET 2 AA2 3 ALA A 54 VAL A 57 -1 O LEU A 55 N GLY A 17 SHEET 3 AA2 3 PHE A 46 LEU A 48 -1 N SER A 47 O ALA A 56 SHEET 1 AA3 4 ASP A 108 SER A 114 0 SHEET 2 AA3 4 SER A 194 LEU A 204 1 O ILE A 202 N MET A 111 SHEET 3 AA3 4 ARG A 178 ASP A 187 -1 N LEU A 181 O ILE A 199 SHEET 4 AA3 4 VAL A 138 LEU A 143 -1 N SER A 139 O VAL A 186 SHEET 1 AA4 3 ARG A 122 PRO A 124 0 SHEET 2 AA4 3 LYS A 160 LEU A 167 -1 O LEU A 165 N PHE A 123 SHEET 3 AA4 3 PHE A 149 LEU A 156 -1 N SER A 150 O VAL A 166 SHEET 1 AA5 2 THR A 212 PHE A 213 0 SHEET 2 AA5 2 ALA A 237 THR A 238 -1 O THR A 238 N THR A 212 SHEET 1 AA6 4 VAL A 217 GLY A 221 0 SHEET 2 AA6 4 GLU A 302 ASP A 310 1 O GLN A 308 N LEU A 218 SHEET 3 AA6 4 PHE A 286 ASP A 295 -1 N ILE A 289 O ILE A 307 SHEET 4 AA6 4 LEU A 248 PHE A 252 -1 N ASP A 249 O ARG A 294 SHEET 1 AA7 3 LEU A 231 ARG A 234 0 SHEET 2 AA7 3 ALA A 272 VAL A 275 -1 O ILE A 273 N LEU A 232 SHEET 3 AA7 3 PHE A 264 LEU A 266 -1 N GLY A 265 O HIS A 274 SSBOND 1 CYS A 67 CYS A 73 1555 1555 2.03 LINK OG SER A 194 C1 MAN A 409 1555 1555 1.45 LINK OG1 THR A 196 C1 MAN A 410 1555 1555 1.44 LINK ND2 ASN A 236 C1 NAG B 1 1555 1555 1.44 LINK O6 NAG B 1 C1 FUC B 2 1555 1555 1.44 LINK OE1 GLU A 8 CA CA A 405 1555 1555 2.67 LINK OE2 GLU A 8 CA CA A 406 1555 1555 2.42 LINK OE2 GLU A 9 CA CA A 406 1555 1555 2.73 LINK OD1 ASP A 62 CA CA A 406 1555 1555 2.41 LINK OE1 GLU A 64 CA CA A 405 1555 1555 2.56 LINK OE2 GLU A 64 CA CA A 405 1555 1555 2.50 LINK OE2 GLU A 64 CA CA A 406 1555 1555 2.61 LINK OD1 ASP A 96 CA CA A 405 1555 1555 2.61 LINK O LEU A 97 CA CA A 405 1555 1555 2.43 LINK OD1 ASN A 98 CA CA A 404 1555 1555 2.46 LINK OD1 ASP A 99 CA CA A 405 1555 1555 2.80 LINK OD2 ASP A 99 CA CA A 406 1555 1555 2.59 LINK O ASN A 100 CA CA A 404 1555 1555 2.40 LINK OE2 GLU A 115 CA CA A 402 1555 1555 2.48 LINK OE1 GLU A 115 CA CA A 403 1555 1555 2.69 LINK OD1 ASP A 130 CA CA A 404 1555 1555 2.71 LINK OD2 ASP A 130 CA CA A 404 1555 1555 2.55 LINK OD2 ASP A 132 CA CA A 404 1555 1555 2.59 LINK OD1 ASP A 132 CA CA A 405 1555 1555 2.60 LINK O ASN A 136 CA CA A 404 1555 1555 2.47 LINK OD1 ASP A 172 CA CA A 402 1555 1555 2.47 LINK OE1 GLU A 174 CA CA A 403 1555 1555 2.52 LINK OE2 GLU A 174 CA CA A 403 1555 1555 3.06 LINK OD2 ASP A 187 CA CA A 404 1555 1555 3.04 LINK OD1 ASP A 205 CA CA A 403 1555 1555 2.49 LINK O VAL A 206 CA CA A 403 1555 1555 2.51 LINK OD1 ASN A 207 CA CA A 401 1555 1555 2.94 LINK OD2 ASP A 208 CA CA A 402 1555 1555 2.43 LINK OD1 ASP A 208 CA CA A 403 1555 1555 2.50 LINK O ASN A 209 CA CA A 401 1555 1555 2.44 LINK OD1 ASP A 239 CA CA A 401 1555 1555 2.49 LINK OD2 ASP A 239 CA CA A 401 1555 1555 2.58 LINK OD2 ASP A 241 CA CA A 401 1555 1555 2.47 LINK OD1 ASP A 241 CA CA A 403 1555 1555 2.68 LINK O ASN A 245 CA CA A 401 1555 1555 2.54 LINK OD2 ASP A 295 CA CA A 401 1555 1555 2.39 CISPEP 1 HIS A 83 PRO A 84 0 -2.58 CISPEP 2 THR A 190 PRO A 191 0 1.42 CISPEP 3 GLN A 298 PRO A 299 0 1.00 CRYST1 108.637 108.637 96.614 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009205 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009205 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010350 0.00000