HEADER IMMUNE SYSTEM 17-MAY-15 4ZUU TITLE CRYSTAL STRUCTURE OF EQUINE MHC I(EQCA-N*00602) IN COMPLEXED WITH TITLE 2 EQUINE INFECTIOUS ANAEMIA VIRUS (EIAV) DERIVED PEPTIDE GAG-CF9 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CLASSICAL MHC CLASS I ANTIGEN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 22-295; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: BETA-2-MICROGLOBULIN; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: UNP RESIDUES 21-119; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: CYS-THR-SER-GLU-GLU-MET-ASN-ALA-PHE; COMPND 14 CHAIN: C; COMPND 15 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: EQUUS CABALLUS; SOURCE 3 ORGANISM_COMMON: HORSE; SOURCE 4 ORGANISM_TAXID: 9796; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 9 ORGANISM_COMMON: MOUSE; SOURCE 10 ORGANISM_TAXID: 10090; SOURCE 11 GENE: B2M; SOURCE 12 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 13 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 14 MOL_ID: 3; SOURCE 15 SYNTHETIC: YES; SOURCE 16 ORGANISM_SCIENTIFIC: EQUINE INFECTIOUS ANEMIA VIRUS; SOURCE 17 ORGANISM_TAXID: 11665 KEYWDS LENTIVIRUS VACCINE, IMMUNE SYSTEM EXPDTA X-RAY DIFFRACTION AUTHOR S.YAO,J.LIU,J.QI,R.CHEN,N.ZHANG,Y.LIU,C.XIA REVDAT 2 08-NOV-23 4ZUU 1 REMARK REVDAT 1 06-APR-16 4ZUU 0 JRNL AUTH S.YAO,J.LIU,J.QI,R.CHEN,N.ZHANG,Y.LIU,J.WANG,Y.WU,G.F.GAO, JRNL AUTH 2 C.XIA JRNL TITL STRUCTURAL ILLUMINATION OF EQUINE MHC CLASS I MOLECULES JRNL TITL 2 HIGHLIGHTS UNCONVENTIONAL EPITOPE PRESENTATION MANNER THAT JRNL TITL 3 IS EVOLVED IN EQUINE LEUKOCYTE ANTIGEN ALLELES JRNL REF J IMMUNOL. V. 196 1943 2016 JRNL REFN ESSN 1550-6606 JRNL PMID 26764037 JRNL DOI 10.4049/JIMMUNOL.1501352 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.5_2 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.180 REMARK 3 COMPLETENESS FOR RANGE (%) : 92.2 REMARK 3 NUMBER OF REFLECTIONS : 24712 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.230 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.266 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 1246 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.6114 - 4.5622 0.94 2882 150 0.1920 0.2223 REMARK 3 2 4.5622 - 3.6228 0.96 2761 161 0.1864 0.2178 REMARK 3 3 3.6228 - 3.1653 0.98 2774 141 0.2274 0.2569 REMARK 3 4 3.1653 - 2.8761 0.96 2697 148 0.2631 0.3595 REMARK 3 5 2.8761 - 2.6701 0.95 2650 126 0.2806 0.3087 REMARK 3 6 2.6701 - 2.5128 0.92 2549 153 0.2895 0.2986 REMARK 3 7 2.5128 - 2.3870 0.90 2481 135 0.2750 0.3420 REMARK 3 8 2.3870 - 2.2831 0.88 2442 126 0.2960 0.3658 REMARK 3 9 2.2831 - 2.1952 0.80 2230 106 0.3080 0.3472 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : 0.34 REMARK 3 B_SOL : 43.41 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.310 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 29.740 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 7.89400 REMARK 3 B22 (A**2) : 7.89400 REMARK 3 B33 (A**2) : -15.78790 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3204 REMARK 3 ANGLE : 0.853 4345 REMARK 3 CHIRALITY : 0.068 440 REMARK 3 PLANARITY : 0.004 580 REMARK 3 DIHEDRAL : 19.122 1168 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 15 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 1:174) REMARK 3 ORIGIN FOR THE GROUP (A): -7.2632 4.3964 16.3251 REMARK 3 T TENSOR REMARK 3 T11: 0.4248 T22: 0.3616 REMARK 3 T33: 0.3321 T12: -0.0406 REMARK 3 T13: 0.1150 T23: -0.0566 REMARK 3 L TENSOR REMARK 3 L11: 1.2456 L22: 2.1590 REMARK 3 L33: 2.2893 L12: 0.3994 REMARK 3 L13: 0.2775 L23: 0.2235 REMARK 3 S TENSOR REMARK 3 S11: 0.0677 S12: -0.0990 S13: 0.0054 REMARK 3 S21: 0.4970 S22: -0.1907 S23: 0.1915 REMARK 3 S31: 0.0940 S32: -0.4791 S33: 0.0455 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 175:274) REMARK 3 ORIGIN FOR THE GROUP (A): 19.6958 -3.7994 38.4850 REMARK 3 T TENSOR REMARK 3 T11: 0.6632 T22: 0.2763 REMARK 3 T33: 0.4007 T12: -0.0573 REMARK 3 T13: 0.0150 T23: -0.0161 REMARK 3 L TENSOR REMARK 3 L11: 1.6774 L22: 0.2711 REMARK 3 L33: 0.7586 L12: -0.2942 REMARK 3 L13: 0.5178 L23: -0.4722 REMARK 3 S TENSOR REMARK 3 S11: 0.0166 S12: -0.3586 S13: 0.2004 REMARK 3 S21: 0.3111 S22: -0.1121 S23: -0.1043 REMARK 3 S31: 0.0323 S32: -0.1283 S33: 0.1167 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 1:11) REMARK 3 ORIGIN FOR THE GROUP (A): 17.0410 6.6265 19.6321 REMARK 3 T TENSOR REMARK 3 T11: 0.4893 T22: 0.2310 REMARK 3 T33: 0.4346 T12: -0.0262 REMARK 3 T13: 0.0318 T23: 0.0133 REMARK 3 L TENSOR REMARK 3 L11: 0.6058 L22: 0.0501 REMARK 3 L33: 1.1943 L12: -0.1700 REMARK 3 L13: 0.3432 L23: -0.0335 REMARK 3 S TENSOR REMARK 3 S11: -0.1473 S12: -0.0087 S13: 0.1502 REMARK 3 S21: 0.5353 S22: -0.2901 S23: -0.4836 REMARK 3 S31: -0.4088 S32: 0.5230 S33: 0.1929 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 12:19) REMARK 3 ORIGIN FOR THE GROUP (A): 24.6614 -15.0112 24.0175 REMARK 3 T TENSOR REMARK 3 T11: 0.7280 T22: 0.3539 REMARK 3 T33: 0.5889 T12: 0.1252 REMARK 3 T13: 0.0736 T23: 0.1079 REMARK 3 L TENSOR REMARK 3 L11: 1.1805 L22: 0.1850 REMARK 3 L33: 1.1150 L12: -0.3207 REMARK 3 L13: 0.3957 L23: 0.0905 REMARK 3 S TENSOR REMARK 3 S11: 0.0389 S12: -0.0067 S13: 0.0343 REMARK 3 S21: -0.1856 S22: -0.1354 S23: 0.3764 REMARK 3 S31: 0.4663 S32: 0.3453 S33: 0.0263 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 20:30) REMARK 3 ORIGIN FOR THE GROUP (A): 17.0290 -2.3248 19.2978 REMARK 3 T TENSOR REMARK 3 T11: 0.5736 T22: 0.2635 REMARK 3 T33: 0.4339 T12: 0.0185 REMARK 3 T13: 0.0256 T23: 0.0136 REMARK 3 L TENSOR REMARK 3 L11: 0.7190 L22: 0.0501 REMARK 3 L33: 1.2906 L12: -0.1845 REMARK 3 L13: 0.5078 L23: -0.1921 REMARK 3 S TENSOR REMARK 3 S11: -0.0953 S12: -0.0932 S13: 0.0356 REMARK 3 S21: -0.1698 S22: 0.1395 S23: 0.2456 REMARK 3 S31: -0.0065 S32: -0.0614 S33: 0.1149 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 31:41) REMARK 3 ORIGIN FOR THE GROUP (A): 16.6564 3.5469 10.3218 REMARK 3 T TENSOR REMARK 3 T11: 0.4527 T22: 0.3304 REMARK 3 T33: 0.4622 T12: 0.0613 REMARK 3 T13: 0.0411 T23: 0.0442 REMARK 3 L TENSOR REMARK 3 L11: 1.0825 L22: 0.0450 REMARK 3 L33: 0.9832 L12: -0.1727 REMARK 3 L13: 0.4092 L23: 0.0610 REMARK 3 S TENSOR REMARK 3 S11: -0.3202 S12: 0.3641 S13: 0.2659 REMARK 3 S21: 0.1341 S22: -0.1581 S23: -0.2086 REMARK 3 S31: -0.1444 S32: -0.2166 S33: 0.1662 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 42:46) REMARK 3 ORIGIN FOR THE GROUP (A): 27.8673 -5.3045 7.3478 REMARK 3 T TENSOR REMARK 3 T11: 0.7357 T22: 0.6325 REMARK 3 T33: 0.6865 T12: 0.1010 REMARK 3 T13: 0.1874 T23: 0.1161 REMARK 3 L TENSOR REMARK 3 L11: 1.9802 L22: 0.2937 REMARK 3 L33: 1.4844 L12: -0.6800 REMARK 3 L13: 1.2750 L23: -0.3115 REMARK 3 S TENSOR REMARK 3 S11: 0.0381 S12: 0.3727 S13: -0.2081 REMARK 3 S21: -0.4105 S22: -0.5706 S23: -0.0959 REMARK 3 S31: 0.3127 S32: 0.0932 S33: 0.0852 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 47:51) REMARK 3 ORIGIN FOR THE GROUP (A): 16.4311 -8.1006 9.2837 REMARK 3 T TENSOR REMARK 3 T11: 1.1192 T22: 0.2603 REMARK 3 T33: 0.6348 T12: -0.0182 REMARK 3 T13: -0.1196 T23: 0.0235 REMARK 3 L TENSOR REMARK 3 L11: 1.3521 L22: 0.0652 REMARK 3 L33: 1.3861 L12: -0.2655 REMARK 3 L13: 0.0295 L23: 0.1319 REMARK 3 S TENSOR REMARK 3 S11: 0.0229 S12: -0.2683 S13: -0.4989 REMARK 3 S21: 0.5273 S22: -0.2353 S23: 0.6342 REMARK 3 S31: 0.5703 S32: -0.2814 S33: 0.0992 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 52:56) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4736 1.2935 15.9187 REMARK 3 T TENSOR REMARK 3 T11: 0.5522 T22: 0.4041 REMARK 3 T33: 0.6477 T12: -0.0355 REMARK 3 T13: -0.0408 T23: -0.1379 REMARK 3 L TENSOR REMARK 3 L11: 0.5792 L22: 0.1473 REMARK 3 L33: 0.5771 L12: -0.2907 REMARK 3 L13: 0.1927 L23: -0.0573 REMARK 3 S TENSOR REMARK 3 S11: 0.3104 S12: 0.3945 S13: -0.6573 REMARK 3 S21: 0.2266 S22: 0.4482 S23: -0.4549 REMARK 3 S31: 0.2738 S32: 0.0103 S33: 0.0321 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 57:61) REMARK 3 ORIGIN FOR THE GROUP (A): 3.5934 10.0141 22.7433 REMARK 3 T TENSOR REMARK 3 T11: 0.8646 T22: 0.5066 REMARK 3 T33: 0.4235 T12: 0.1503 REMARK 3 T13: 0.0441 T23: -0.0527 REMARK 3 L TENSOR REMARK 3 L11: 0.0716 L22: 0.7278 REMARK 3 L33: 1.3615 L12: -0.0528 REMARK 3 L13: 0.0608 L23: -0.9949 REMARK 3 S TENSOR REMARK 3 S11: -0.0324 S12: -0.3689 S13: 0.0117 REMARK 3 S21: 0.5628 S22: 0.1332 S23: -0.5324 REMARK 3 S31: 0.0777 S32: -0.1673 S33: 0.1229 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 62:71) REMARK 3 ORIGIN FOR THE GROUP (A): 15.8986 -5.3542 16.2727 REMARK 3 T TENSOR REMARK 3 T11: 0.5623 T22: 0.2435 REMARK 3 T33: 0.5078 T12: 0.0190 REMARK 3 T13: 0.0500 T23: 0.0289 REMARK 3 L TENSOR REMARK 3 L11: 0.7709 L22: 0.1978 REMARK 3 L33: 0.8371 L12: -0.3215 REMARK 3 L13: 0.8065 L23: -0.3294 REMARK 3 S TENSOR REMARK 3 S11: -0.2277 S12: 0.2936 S13: -0.2764 REMARK 3 S21: 0.2471 S22: -0.1787 S23: 0.1697 REMARK 3 S31: 0.3608 S32: -0.1684 S33: 0.0586 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 72:77) REMARK 3 ORIGIN FOR THE GROUP (A): 33.9211 -10.5348 17.6104 REMARK 3 T TENSOR REMARK 3 T11: 0.6882 T22: 0.5976 REMARK 3 T33: 0.4326 T12: 0.1870 REMARK 3 T13: 0.1206 T23: 0.1488 REMARK 3 L TENSOR REMARK 3 L11: 1.3213 L22: 1.5017 REMARK 3 L33: 1.7215 L12: -0.5661 REMARK 3 L13: 1.4925 L23: -0.5262 REMARK 3 S TENSOR REMARK 3 S11: 0.0052 S12: -0.1484 S13: 0.2867 REMARK 3 S21: 0.2239 S22: -0.5842 S23: 0.3537 REMARK 3 S31: 0.2733 S32: 0.7001 S33: -0.0053 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 78:83) REMARK 3 ORIGIN FOR THE GROUP (A): 23.8752 1.0948 12.2082 REMARK 3 T TENSOR REMARK 3 T11: 0.4551 T22: 0.4255 REMARK 3 T33: 0.4830 T12: 0.0718 REMARK 3 T13: 0.0256 T23: 0.1118 REMARK 3 L TENSOR REMARK 3 L11: 0.0461 L22: 0.1480 REMARK 3 L33: 1.9112 L12: -0.0708 REMARK 3 L13: 0.2994 L23: -0.4446 REMARK 3 S TENSOR REMARK 3 S11: -0.1865 S12: 0.2205 S13: -0.0100 REMARK 3 S21: 0.2146 S22: -0.2034 S23: 0.2444 REMARK 3 S31: -0.1486 S32: 0.4887 S33: 0.1197 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 84:90) REMARK 3 ORIGIN FOR THE GROUP (A): 19.8847 12.7978 10.6275 REMARK 3 T TENSOR REMARK 3 T11: 0.5181 T22: 0.3616 REMARK 3 T33: 0.4023 T12: -0.0405 REMARK 3 T13: -0.0458 T23: 0.1431 REMARK 3 L TENSOR REMARK 3 L11: 0.6252 L22: 0.1386 REMARK 3 L33: 0.2465 L12: -0.2334 REMARK 3 L13: 0.2153 L23: 0.0142 REMARK 3 S TENSOR REMARK 3 S11: -0.4514 S12: 0.4427 S13: 0.1814 REMARK 3 S21: 0.2908 S22: -0.0354 S23: -0.1686 REMARK 3 S31: -0.4066 S32: -0.1123 S33: 0.2132 REMARK 3 TLS GROUP : 15 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 91:99) REMARK 3 ORIGIN FOR THE GROUP (A): 27.8762 -1.2394 21.5546 REMARK 3 T TENSOR REMARK 3 T11: 0.5603 T22: 0.5742 REMARK 3 T33: 0.5531 T12: 0.0402 REMARK 3 T13: -0.0285 T23: 0.1115 REMARK 3 L TENSOR REMARK 3 L11: 0.3696 L22: 0.0352 REMARK 3 L33: 1.7038 L12: 0.1161 REMARK 3 L13: 0.3011 L23: 0.1034 REMARK 3 S TENSOR REMARK 3 S11: -0.0735 S12: 0.0041 S13: 0.3972 REMARK 3 S21: 0.5301 S22: -0.1259 S23: 0.1673 REMARK 3 S31: -0.2488 S32: 0.4746 S33: 0.1096 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZUU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 21-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000209250. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUN-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97900 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 26541 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.7 REMARK 200 DATA REDUNDANCY : 8.800 REMARK 200 R MERGE (I) : 0.05800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.7140 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.28 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 9.10 REMARK 200 R MERGE FOR SHELL (I) : 0.53800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.867 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: HKL-2000 REMARK 200 STARTING MODEL: 1Q94 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.22 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.02 M MAGNESIUM CHLORIDE HEXAHYDRARE, REMARK 280 0.1 M HEPES, 22% W/V POLYACRYLIC ACID SODIUM SALT 5,100, PH 7.5, REMARK 280 VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 41 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+3/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+1/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+3/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 103.22900 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 34.73500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 34.73500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 51.61450 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 34.73500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 34.73500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 154.84350 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 34.73500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 34.73500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 51.61450 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 34.73500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 34.73500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 154.84350 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 103.22900 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 311 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 353 LIES ON A SPECIAL POSITION. REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 228 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 101 O HOH B 135 1.84 REMARK 500 O HOH A 315 O HOH A 382 1.88 REMARK 500 O HOH A 322 O HOH A 374 1.89 REMARK 500 O ALA A 267 O HOH A 301 1.89 REMARK 500 O HOH B 125 O HOH B 137 1.89 REMARK 500 CA GLU A 268 O HOH A 301 1.91 REMARK 500 O HOH A 372 O HOH A 383 1.91 REMARK 500 OD2 ASP A 238 O HOH A 302 1.94 REMARK 500 N ARG A 108 O HOH A 303 1.95 REMARK 500 O HOH A 378 O HOH B 135 1.96 REMARK 500 O HOH A 357 O HOH B 135 1.97 REMARK 500 N MET B 54 O HOH B 101 1.98 REMARK 500 NE2 GLN B 38 O HOH B 102 2.00 REMARK 500 NH2 ARG B 81 O HOH B 102 2.00 REMARK 500 O ASP B 76 O HOH B 103 2.00 REMARK 500 OE1 GLN A 155 O HOH A 304 2.01 REMARK 500 O HOH B 108 O HOH B 109 2.01 REMARK 500 NH1 ARG A 62 OE1 GLU C 4 2.04 REMARK 500 O HOH A 375 O HOH A 380 2.09 REMARK 500 NE2 HIS B 13 O HOH B 104 2.15 REMARK 500 NE ARG A 181 O HOH A 305 2.16 REMARK 500 OE1 GLU B 74 O HOH B 105 2.18 REMARK 500 O LYS A 186 O HOH A 306 2.18 REMARK 500 O GLN A 32 O HOH A 307 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 17 20.62 -147.77 REMARK 500 ASP A 29 -132.57 59.76 REMARK 500 ALA A 90 -101.23 -37.48 REMARK 500 ARG A 114 79.86 -169.80 REMARK 500 TYR A 123 -53.73 -123.37 REMARK 500 ARG A 131 -21.96 -144.78 REMARK 500 ASP A 220 7.80 57.17 REMARK 500 ASP A 223 -167.37 -49.22 REMARK 500 VAL A 224 56.51 161.11 REMARK 500 GLN A 226 -25.81 -31.09 REMARK 500 ARG A 239 -11.03 82.52 REMARK 500 ASN B 17 119.43 -37.77 REMARK 500 PRO B 47 -70.16 -56.72 REMARK 500 TRP B 60 -7.92 70.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ZUS RELATED DB: PDB REMARK 900 RELATED ID: 4ZUT RELATED DB: PDB REMARK 900 RELATED ID: 4ZUV RELATED DB: PDB REMARK 900 RELATED ID: 4ZUW RELATED DB: PDB DBREF 4ZUU A 1 274 UNP Q860N6 Q860N6_HORSE 22 295 DBREF 4ZUU B 1 99 UNP P01887 B2MG_MOUSE 21 119 DBREF 4ZUU C 1 9 PDB 4ZUU 4ZUU 1 9 SEQADV 4ZUU ASP B 85 UNP P01887 ALA 105 ENGINEERED MUTATION SEQRES 1 A 274 GLY SER HIS SER MET ARG TYR PHE TYR THR ALA VAL SER SEQRES 2 A 274 ARG PRO GLY ARG GLY GLU PRO ARG PHE ILE ALA VAL GLY SEQRES 3 A 274 TYR VAL ASP ASP THR GLN PHE VAL ARG PHE ASP SER ASP SEQRES 4 A 274 ALA ALA SER PRO ARG MET GLU PRO ARG ALA PRO TRP VAL SEQRES 5 A 274 GLU GLN GLU GLY PRO GLU TYR TRP GLU ARG GLU THR ARG SEQRES 6 A 274 ASN MET LYS GLU ALA THR GLN ASN PHE ARG VAL GLY LEU SEQRES 7 A 274 ASN THR LEU HIS GLY TYR TYR ASN GLN SER GLU ALA GLY SEQRES 8 A 274 SER HIS THR LEU GLN ARG MET TYR GLY CYS ASP VAL GLY SEQRES 9 A 274 PRO ASP GLY ARG LEU LEU ARG GLY TYR ARG GLN ASP ALA SEQRES 10 A 274 TYR ASP GLY ALA ASP TYR ILE ALA LEU ASN GLU ASP LEU SEQRES 11 A 274 ARG SER TRP THR ALA ALA ASP ALA ALA ALA GLN ILE THR SEQRES 12 A 274 ARG ARG LYS ARG GLU GLU ALA GLY GLU ALA GLU GLN CYS SEQRES 13 A 274 ARG ASN TYR LEU GLU GLY THR CYS VAL GLU TRP LEU LEU SEQRES 14 A 274 ARG TYR LEU GLU ASN GLY ASN GLU THR LEU GLN ARG ALA SEQRES 15 A 274 ASP ALA PRO LYS THR HIS VAL THR HIS HIS PRO ILE SER SEQRES 16 A 274 ASP HIS GLU VAL THR LEU ARG CYS TRP ALA LEU GLY PHE SEQRES 17 A 274 TYR PRO GLU GLU ILE SER LEU SER TRP GLN ARG ASP GLY SEQRES 18 A 274 GLU ASP VAL THR GLN ASP THR GLU PHE VAL GLU THR ARG SEQRES 19 A 274 PRO ALA GLY ASP ARG THR PHE GLN LYS TRP ALA ALA VAL SEQRES 20 A 274 VAL VAL PRO SER GLY GLU GLU GLN ARG TYR THR CYS HIS SEQRES 21 A 274 VAL GLN HIS GLU GLY LEU ALA GLU PRO VAL THR LEU ARG SEQRES 22 A 274 TRP SEQRES 1 B 99 ILE GLN LYS THR PRO GLN ILE GLN VAL TYR SER ARG HIS SEQRES 2 B 99 PRO PRO GLU ASN GLY LYS PRO ASN ILE LEU ASN CYS TYR SEQRES 3 B 99 VAL THR GLN PHE HIS PRO PRO HIS ILE GLU ILE GLN MET SEQRES 4 B 99 LEU LYS ASN GLY LYS LYS ILE PRO LYS VAL GLU MET SER SEQRES 5 B 99 ASP MET SER PHE SER LYS ASP TRP SER PHE TYR ILE LEU SEQRES 6 B 99 ALA HIS THR GLU PHE THR PRO THR GLU THR ASP THR TYR SEQRES 7 B 99 ALA CYS ARG VAL LYS HIS ASP SER MET ALA GLU PRO LYS SEQRES 8 B 99 THR VAL TYR TRP ASP ARG ASP MET SEQRES 1 C 9 CYS THR SER GLU GLU MET ASN ALA PHE FORMUL 4 HOH *130(H2 O) HELIX 1 AA1 ALA A 49 GLN A 54 1 6 HELIX 2 AA2 GLY A 56 TYR A 85 1 30 HELIX 3 AA3 ASP A 137 GLY A 151 1 15 HELIX 4 AA4 GLY A 151 GLY A 162 1 12 HELIX 5 AA5 GLY A 162 GLY A 175 1 14 HELIX 6 AA6 GLY A 175 GLN A 180 1 6 HELIX 7 AA7 VAL A 224 THR A 228 5 5 HELIX 8 AA8 GLU A 253 GLN A 255 5 3 SHEET 1 AA1 8 GLU A 46 PRO A 47 0 SHEET 2 AA1 8 THR A 31 ASP A 37 -1 N ARG A 35 O GLU A 46 SHEET 3 AA1 8 ARG A 21 VAL A 28 -1 N VAL A 28 O THR A 31 SHEET 4 AA1 8 HIS A 3 VAL A 12 -1 N ARG A 6 O TYR A 27 SHEET 5 AA1 8 THR A 94 VAL A 103 -1 O ARG A 97 N TYR A 9 SHEET 6 AA1 8 LEU A 109 TYR A 118 -1 O LEU A 110 N ASP A 102 SHEET 7 AA1 8 ALA A 121 LEU A 126 -1 O ILE A 124 N ASP A 116 SHEET 8 AA1 8 TRP A 133 ALA A 135 -1 O THR A 134 N ALA A 125 SHEET 1 AA2 4 LYS A 186 PRO A 193 0 SHEET 2 AA2 4 GLU A 198 PHE A 208 -1 O THR A 200 N HIS A 192 SHEET 3 AA2 4 PHE A 241 PRO A 250 -1 O VAL A 249 N VAL A 199 SHEET 4 AA2 4 GLU A 229 PHE A 230 -1 N GLU A 229 O ALA A 246 SHEET 1 AA3 4 LYS A 186 PRO A 193 0 SHEET 2 AA3 4 GLU A 198 PHE A 208 -1 O THR A 200 N HIS A 192 SHEET 3 AA3 4 PHE A 241 PRO A 250 -1 O VAL A 249 N VAL A 199 SHEET 4 AA3 4 ARG A 234 PRO A 235 -1 N ARG A 234 O GLN A 242 SHEET 1 AA4 3 SER A 214 ARG A 219 0 SHEET 2 AA4 3 TYR A 257 GLN A 262 -1 O HIS A 260 N SER A 216 SHEET 3 AA4 3 VAL A 270 LEU A 272 -1 O LEU A 272 N CYS A 259 SHEET 1 AA5 4 GLN B 6 SER B 11 0 SHEET 2 AA5 4 ASN B 21 PHE B 30 -1 O TYR B 26 N GLN B 8 SHEET 3 AA5 4 PHE B 62 PHE B 70 -1 O ALA B 66 N CYS B 25 SHEET 4 AA5 4 GLU B 50 MET B 51 -1 N GLU B 50 O HIS B 67 SHEET 1 AA6 4 GLN B 6 SER B 11 0 SHEET 2 AA6 4 ASN B 21 PHE B 30 -1 O TYR B 26 N GLN B 8 SHEET 3 AA6 4 PHE B 62 PHE B 70 -1 O ALA B 66 N CYS B 25 SHEET 4 AA6 4 SER B 55 PHE B 56 -1 N SER B 55 O TYR B 63 SHEET 1 AA7 4 LYS B 44 LYS B 45 0 SHEET 2 AA7 4 GLU B 36 LYS B 41 -1 N LYS B 41 O LYS B 44 SHEET 3 AA7 4 TYR B 78 LYS B 83 -1 O ARG B 81 N GLN B 38 SHEET 4 AA7 4 LYS B 91 TYR B 94 -1 O LYS B 91 N VAL B 82 SSBOND 1 CYS A 101 CYS A 164 1555 1555 2.05 SSBOND 2 CYS A 203 CYS A 259 1555 1555 2.04 SSBOND 3 CYS B 25 CYS B 80 1555 1555 2.03 CISPEP 1 TYR A 209 PRO A 210 0 7.88 CISPEP 2 HIS B 31 PRO B 32 0 2.04 CRYST1 69.470 69.470 206.458 90.00 90.00 90.00 P 41 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014395 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014395 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004844 0.00000