data_4ZV5 # _entry.id 4ZV5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4ZV5 WWPDB D_1000209970 # _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.entry_id 4ZV5 _pdbx_database_status.recvd_initial_deposition_date 2015-05-18 _pdbx_database_status.SG_entry N _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBE _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zabransky, A.' 1 'Dolezal, M.' 2 'Dostal, J.' 3 'Vanek, O.' 4 'Hadravova, R.' 5 'Stokrova, J.' 6 'Brynda, J.' 7 'Pichova, I.' 8 # loop_ _citation.abstract _citation.abstract_id_CAS _citation.book_id_ISBN _citation.book_publisher _citation.book_publisher_city _citation.book_title _citation.coordinate_linkage _citation.country _citation.database_id_Medline _citation.details _citation.id _citation.journal_abbrev _citation.journal_id_ASTM _citation.journal_id_CSD _citation.journal_id_ISSN _citation.journal_full _citation.journal_issue _citation.journal_volume _citation.language _citation.page_first _citation.page_last _citation.title _citation.year _citation.database_id_CSD _citation.pdbx_database_id_DOI _citation.pdbx_database_id_PubMed _citation.unpublished_flag ? ? ? ? ? ? ? UK ? ? primary Retrovirology ? ? 1742-4690 ? ? 13 ? 2 2 'Myristoylation drives dimerization of matrix protein from mouse mammary tumor virus.' 2016 ? 10.1186/s12977-015-0235-8 26728401 ? ? ? ? ? ? ? ? US ? ? 1 'Protein Expr.Purif.' PEXPEJ 0757 1046-5928 ? ? 92 ? 94 99 'One-step separation of myristoylated and nonmyristoylated retroviral matrix proteins.' 2013 ? 10.1016/j.pep.2013.09.003 24056256 ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Dolezal, M.' 1 primary 'Zabransky, A.' 2 primary 'Dostal, J.' 3 primary 'Vanek, O.' 4 primary 'Brynda, J.' 5 primary 'Lepsik, M.' 6 primary 'Hadravova, R.' 7 primary 'Pichova, I.' 8 1 'Dolezal, M.' 9 1 'Zabransky, A.' 10 1 'Hrabal, R.' 11 1 'Ruml, T.' 12 1 'Pichova, I.' 13 1 'Rumlova, M.' 14 # _cell.angle_alpha 90.000 _cell.angle_alpha_esd ? _cell.angle_beta 90.000 _cell.angle_beta_esd ? _cell.angle_gamma 120.000 _cell.angle_gamma_esd ? _cell.entry_id 4ZV5 _cell.details ? _cell.formula_units_Z ? _cell.length_a 61.927 _cell.length_a_esd ? _cell.length_b 61.927 _cell.length_b_esd ? _cell.length_c 90.054 _cell.length_c_esd ? _cell.volume ? _cell.volume_esd ? _cell.Z_PDB 12 _cell.reciprocal_angle_alpha ? _cell.reciprocal_angle_beta ? _cell.reciprocal_angle_gamma ? _cell.reciprocal_angle_alpha_esd ? _cell.reciprocal_angle_beta_esd ? _cell.reciprocal_angle_gamma_esd ? _cell.reciprocal_length_a ? _cell.reciprocal_length_b ? _cell.reciprocal_length_c ? _cell.reciprocal_length_a_esd ? _cell.reciprocal_length_b_esd ? _cell.reciprocal_length_c_esd ? _cell.pdbx_unique_axis ? # _symmetry.entry_id 4ZV5 _symmetry.cell_setting ? _symmetry.Int_Tables_number 152 _symmetry.space_group_name_Hall ? _symmetry.space_group_name_H-M 'P 31 2 1' _symmetry.pdbx_full_space_group_name_H-M ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Matrix protein p10' 10489.055 2 ? ? 'UNP residues 2-92' ? 2 non-polymer syn 'MYRISTIC ACID' 228.371 2 ? ? ? ? 3 water nat water 18.015 87 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GVSGSKGQKLFVSVLQRLLSERGLHVKESSAIEFYQFLIKVSPWFPEEGGLNLQDWKRVGREMKRYAAEHGTDSIPKQAY PIWLQLREILT ; _entity_poly.pdbx_seq_one_letter_code_can ;GVSGSKGQKLFVSVLQRLLSERGLHVKESSAIEFYQFLIKVSPWFPEEGGLNLQDWKRVGREMKRYAAEHGTDSIPKQAY PIWLQLREILT ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 VAL n 1 3 SER n 1 4 GLY n 1 5 SER n 1 6 LYS n 1 7 GLY n 1 8 GLN n 1 9 LYS n 1 10 LEU n 1 11 PHE n 1 12 VAL n 1 13 SER n 1 14 VAL n 1 15 LEU n 1 16 GLN n 1 17 ARG n 1 18 LEU n 1 19 LEU n 1 20 SER n 1 21 GLU n 1 22 ARG n 1 23 GLY n 1 24 LEU n 1 25 HIS n 1 26 VAL n 1 27 LYS n 1 28 GLU n 1 29 SER n 1 30 SER n 1 31 ALA n 1 32 ILE n 1 33 GLU n 1 34 PHE n 1 35 TYR n 1 36 GLN n 1 37 PHE n 1 38 LEU n 1 39 ILE n 1 40 LYS n 1 41 VAL n 1 42 SER n 1 43 PRO n 1 44 TRP n 1 45 PHE n 1 46 PRO n 1 47 GLU n 1 48 GLU n 1 49 GLY n 1 50 GLY n 1 51 LEU n 1 52 ASN n 1 53 LEU n 1 54 GLN n 1 55 ASP n 1 56 TRP n 1 57 LYS n 1 58 ARG n 1 59 VAL n 1 60 GLY n 1 61 ARG n 1 62 GLU n 1 63 MET n 1 64 LYS n 1 65 ARG n 1 66 TYR n 1 67 ALA n 1 68 ALA n 1 69 GLU n 1 70 HIS n 1 71 GLY n 1 72 THR n 1 73 ASP n 1 74 SER n 1 75 ILE n 1 76 PRO n 1 77 LYS n 1 78 GLN n 1 79 ALA n 1 80 TYR n 1 81 PRO n 1 82 ILE n 1 83 TRP n 1 84 LEU n 1 85 GLN n 1 86 LEU n 1 87 ARG n 1 88 GLU n 1 89 ILE n 1 90 LEU n 1 91 THR n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 91 _entity_src_gen.gene_src_common_name MMTV _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene gag _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mouse mammary tumor virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 11758 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET-22b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GAG_MMTVB _struct_ref.pdbx_db_accession P10258 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GVSGSKGQKLFVSVLQRLLSERGLHVKESSAIEFYQFLIKVSPWFPEEGGLNLQDWKRVGREMKRYAAEHGTDSIPKQAY PIWLQLREILT ; _struct_ref.pdbx_align_begin 2 # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4ZV5 A 1 ? 91 ? P10258 2 ? 92 ? 2 92 2 1 4ZV5 B 1 ? 91 ? P10258 2 ? 92 ? 2 92 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MYR non-polymer . 'MYRISTIC ACID' ? 'C14 H28 O2' 228.371 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.entry_id 4ZV5 _exptl.crystals_number 1 _exptl.details ? _exptl.method 'X-RAY DIFFRACTION' _exptl.method_details ? # _exptl_crystal.colour ? _exptl_crystal.density_diffrn ? _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_method ? _exptl_crystal.density_percent_sol 48.24 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.id 1 _exptl_crystal.preparation ? _exptl_crystal.size_max ? _exptl_crystal.size_mid ? _exptl_crystal.size_min ? _exptl_crystal.size_rad ? _exptl_crystal.colour_lustre ? _exptl_crystal.colour_modifier ? _exptl_crystal.colour_primary ? _exptl_crystal.density_meas ? _exptl_crystal.density_meas_esd ? _exptl_crystal.density_meas_gt ? _exptl_crystal.density_meas_lt ? _exptl_crystal.density_meas_temp ? _exptl_crystal.density_meas_temp_esd ? _exptl_crystal.density_meas_temp_gt ? _exptl_crystal.density_meas_temp_lt ? _exptl_crystal.pdbx_crystal_image_url ? _exptl_crystal.pdbx_crystal_image_format ? _exptl_crystal.pdbx_mosaicity ? _exptl_crystal.pdbx_mosaicity_esd ? # _exptl_crystal_grow.apparatus ? _exptl_crystal_grow.atmosphere ? _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.details ? _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.method_ref ? _exptl_crystal_grow.pH 8.0 _exptl_crystal_grow.pressure ? _exptl_crystal_grow.pressure_esd ? _exptl_crystal_grow.seeding ? _exptl_crystal_grow.seeding_ref ? _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp_esd ? _exptl_crystal_grow.time ? _exptl_crystal_grow.pdbx_details '0.2M potassium chloride, 20% PEG 3350, pH 8.0, VAPOR DIFFUSION, HANGING DROP, temperature 294K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.ambient_environment ? _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.ambient_temp_esd ? _diffrn.crystal_id 1 _diffrn.crystal_support ? _diffrn.crystal_treatment ? _diffrn.details ? _diffrn.id 1 _diffrn.ambient_pressure ? _diffrn.ambient_pressure_esd ? _diffrn.ambient_pressure_gt ? _diffrn.ambient_pressure_lt ? _diffrn.ambient_temp_gt ? _diffrn.ambient_temp_lt ? # _diffrn_detector.details ? _diffrn_detector.detector CCD _diffrn_detector.diffrn_id 1 _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.area_resol_mean ? _diffrn_detector.dtime ? _diffrn_detector.pdbx_frames_total ? _diffrn_detector.pdbx_collection_time_total ? _diffrn_detector.pdbx_collection_date 2013-05-29 # _diffrn_radiation.collimation ? _diffrn_radiation.diffrn_id 1 _diffrn_radiation.filter_edge ? _diffrn_radiation.inhomogeneity ? _diffrn_radiation.monochromator ? _diffrn_radiation.polarisn_norm ? _diffrn_radiation.polarisn_ratio ? _diffrn_radiation.probe ? _diffrn_radiation.type ? _diffrn_radiation.xray_symbol ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_wavelength_list ? _diffrn_radiation.pdbx_wavelength ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_analyzer ? _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.91840 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.current ? _diffrn_source.details ? _diffrn_source.diffrn_id 1 _diffrn_source.power ? _diffrn_source.size ? _diffrn_source.source SYNCHROTRON _diffrn_source.target ? _diffrn_source.type 'BESSY BEAMLINE 14.2' _diffrn_source.voltage ? _diffrn_source.take-off_angle ? _diffrn_source.pdbx_wavelength_list 0.91840 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_beamline 14.2 _diffrn_source.pdbx_synchrotron_site BESSY # _reflns.B_iso_Wilson_estimate 30.3 _reflns.entry_id 4ZV5 _reflns.data_reduction_details ? _reflns.data_reduction_method ? _reflns.d_resolution_high 1.57 _reflns.d_resolution_low 46.08 _reflns.details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.number_all 28486 _reflns.number_obs 28486 _reflns.observed_criterion ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.observed_criterion_I_max ? _reflns.observed_criterion_I_min ? _reflns.observed_criterion_sigma_F 0.0 _reflns.observed_criterion_sigma_I 0.0 _reflns.percent_possible_obs 99.7 _reflns.R_free_details ? _reflns.Rmerge_F_all ? _reflns.Rmerge_F_obs ? _reflns.Friedel_coverage ? _reflns.number_gt ? _reflns.threshold_expression ? _reflns.pdbx_redundancy 6.2 _reflns.pdbx_Rmerge_I_obs 0.039 _reflns.pdbx_Rmerge_I_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_av_sigmaI ? _reflns.pdbx_netI_over_sigmaI 23.9 _reflns.pdbx_res_netI_over_av_sigmaI_2 ? _reflns.pdbx_res_netI_over_sigmaI_2 ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_d_res_high_opt ? _reflns.pdbx_d_res_low_opt ? _reflns.pdbx_d_res_opt_method ? _reflns.phase_calculation_details ? _reflns.pdbx_Rrim_I_all ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_d_opt ? _reflns.pdbx_number_measured_all ? _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.pdbx_CC_half ? _reflns.pdbx_R_split ? # _reflns_shell.d_res_high 1.57 _reflns_shell.d_res_low 1.6110 _reflns_shell.meanI_over_sigI_all ? _reflns_shell.meanI_over_sigI_obs 2.4 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_possible ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.percent_possible_all ? _reflns_shell.percent_possible_obs ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.Rmerge_I_obs ? _reflns_shell.meanI_over_sigI_gt ? _reflns_shell.meanI_over_uI_all ? _reflns_shell.meanI_over_uI_gt ? _reflns_shell.number_measured_gt ? _reflns_shell.number_unique_gt ? _reflns_shell.percent_possible_gt ? _reflns_shell.Rmerge_F_gt ? _reflns_shell.Rmerge_I_gt ? _reflns_shell.pdbx_redundancy ? _reflns_shell.pdbx_Rsym_value ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_netI_over_sigmaI_all ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_R_split ? # _refine.aniso_B[1][1] -0.1500 _refine.aniso_B[1][2] -0.0800 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][2] -0.1500 _refine.aniso_B[2][3] 0.0000 _refine.aniso_B[3][3] 0.2300 _refine.B_iso_max 67.270 _refine.B_iso_mean 24.1833 _refine.B_iso_min 7.550 _refine.correlation_coeff_Fo_to_Fc 0.9490 _refine.correlation_coeff_Fo_to_Fc_free 0.9380 _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.diff_density_max ? _refine.diff_density_max_esd ? _refine.diff_density_min ? _refine.diff_density_min_esd ? _refine.diff_density_rms ? _refine.diff_density_rms_esd ? _refine.entry_id 4ZV5 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_abs_structure_details ? _refine.ls_abs_structure_Flack ? _refine.ls_abs_structure_Flack_esd ? _refine.ls_abs_structure_Rogers ? _refine.ls_abs_structure_Rogers_esd ? _refine.ls_d_res_high 1.5700 _refine.ls_d_res_low 46.0800 _refine.ls_extinction_coef ? _refine.ls_extinction_coef_esd ? _refine.ls_extinction_expression ? _refine.ls_extinction_method ? _refine.ls_goodness_of_fit_all ? _refine.ls_goodness_of_fit_all_esd ? _refine.ls_goodness_of_fit_obs ? _refine.ls_goodness_of_fit_obs_esd ? _refine.ls_hydrogen_treatment ? _refine.ls_matrix_type ? _refine.ls_number_constraints ? _refine.ls_number_parameters ? _refine.ls_number_reflns_all 27039 _refine.ls_number_reflns_obs 27039 _refine.ls_number_reflns_R_free 1423 _refine.ls_number_reflns_R_work ? _refine.ls_number_restraints ? _refine.ls_percent_reflns_obs 99.7700 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2275 _refine.ls_R_factor_R_free 0.2627 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_R_factor_R_work 0.2257 _refine.ls_R_Fsqd_factor_obs ? _refine.ls_R_I_factor_obs ? _refine.ls_redundancy_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.ls_restrained_S_all ? _refine.ls_restrained_S_obs ? _refine.ls_shift_over_esd_max ? _refine.ls_shift_over_esd_mean ? _refine.ls_structure_factor_coef ? _refine.ls_weighting_details ? _refine.ls_weighting_scheme ? _refine.ls_wR_factor_all ? _refine.ls_wR_factor_obs ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.ls_R_factor_gt ? _refine.ls_goodness_of_fit_gt ? _refine.ls_goodness_of_fit_ref ? _refine.ls_shift_over_su_max ? _refine.ls_shift_over_su_max_lt ? _refine.ls_shift_over_su_mean ? _refine.ls_shift_over_su_mean_lt ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_ls_sigma_Fsqd ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_method_to_determine_struct SIRAS _refine.pdbx_starting_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_overall_ESU_R 0.1020 _refine.pdbx_overall_ESU_R_Free 0.1030 _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.pdbx_real_space_R ? _refine.pdbx_density_correlation ? _refine.pdbx_pd_number_of_powder_patterns ? _refine.pdbx_pd_number_of_points ? _refine.pdbx_pd_meas_number_of_points ? _refine.pdbx_pd_proc_ls_prof_R_factor ? _refine.pdbx_pd_proc_ls_prof_wR_factor ? _refine.pdbx_pd_Marquardt_correlation_coeff ? _refine.pdbx_pd_Fsqrd_R_factor ? _refine.pdbx_pd_ls_matrix_band_width ? _refine.pdbx_overall_phase_error ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_diffrn_id 1 _refine.overall_SU_B 2.1150 _refine.overall_SU_ML 0.0760 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_average_fsc_overall ? _refine.pdbx_average_fsc_work ? _refine.pdbx_average_fsc_free ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1473 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 87 _refine_hist.number_atoms_total 1590 _refine_hist.d_res_high 1.5700 _refine_hist.d_res_low 46.0800 # loop_ _refine_ls_restr.pdbx_refine_id _refine_ls_restr.criterion _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.number _refine_ls_restr.rejects _refine_ls_restr.type _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function 'X-RAY DIFFRACTION' ? 0.012 0.019 1581 ? r_bond_refined_d ? ? 'X-RAY DIFFRACTION' ? 1.575 1.970 2127 ? r_angle_refined_deg ? ? 'X-RAY DIFFRACTION' ? 4.559 5.000 190 ? r_dihedral_angle_1_deg ? ? 'X-RAY DIFFRACTION' ? 31.648 23.151 73 ? r_dihedral_angle_2_deg ? ? 'X-RAY DIFFRACTION' ? 13.476 15.000 287 ? r_dihedral_angle_3_deg ? ? 'X-RAY DIFFRACTION' ? 13.444 15.000 13 ? r_dihedral_angle_4_deg ? ? 'X-RAY DIFFRACTION' ? 0.095 0.200 222 ? r_chiral_restr ? ? 'X-RAY DIFFRACTION' ? 0.009 0.021 1173 ? r_gen_planes_refined ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.d_res_high 1.5700 _refine_ls_shell.d_res_low 1.6110 _refine_ls_shell.number_reflns_all 1918 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.number_reflns_R_free 92 _refine_ls_shell.number_reflns_R_work 1826 _refine_ls_shell.percent_reflns_obs 98.8700 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.R_factor_R_free 0.3340 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.R_factor_R_work 0.2940 _refine_ls_shell.redundancy_reflns_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.wR_factor_all ? _refine_ls_shell.wR_factor_obs ? _refine_ls_shell.wR_factor_R_free ? _refine_ls_shell.wR_factor_R_work ? _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.pdbx_phase_error ? _refine_ls_shell.pdbx_fsc_work ? _refine_ls_shell.pdbx_fsc_free ? # _struct.entry_id 4ZV5 _struct.title 'Crystal structure of N-myristoylated mouse mammary tumor virus matrix protein' _struct.pdbx_descriptor 'N-myristoylated mouse mammary tumor virus matrix protein' _struct.pdbx_model_details ? _struct.pdbx_formula_weight ? _struct.pdbx_formula_weight_method ? _struct.pdbx_model_type_details ? _struct.pdbx_CASP_flag ? # _struct_keywords.entry_id 4ZV5 _struct_keywords.text 'retroviral matrix protein, N-myristoylation, VIRAL PROTEIN' _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 AA1 GLY A 7 ? GLU A 21 ? GLY A 8 GLU A 22 1 ? 15 HELX_P HELX_P2 AA2 LYS A 27 ? SER A 42 ? LYS A 28 SER A 43 1 ? 16 HELX_P HELX_P3 AA3 PRO A 43 ? GLY A 49 ? PRO A 44 GLY A 50 1 ? 7 HELX_P HELX_P4 AA4 ASN A 52 ? GLY A 71 ? ASN A 53 GLY A 72 1 ? 20 HELX_P HELX_P5 AA5 THR A 72 ? ILE A 75 ? THR A 73 ILE A 76 5 ? 4 HELX_P HELX_P6 AA6 GLN A 78 ? LEU A 90 ? GLN A 79 LEU A 91 1 ? 13 HELX_P HELX_P7 AA7 GLY B 7 ? GLU B 21 ? GLY B 8 GLU B 22 1 ? 15 HELX_P HELX_P8 AA8 LYS B 27 ? SER B 42 ? LYS B 28 SER B 43 1 ? 16 HELX_P HELX_P9 AA9 PRO B 43 ? GLY B 49 ? PRO B 44 GLY B 50 1 ? 7 HELX_P HELX_P10 AB1 ASN B 52 ? GLY B 71 ? ASN B 53 GLY B 72 1 ? 20 HELX_P HELX_P11 AB2 THR B 72 ? ILE B 75 ? THR B 73 ILE B 76 5 ? 4 HELX_P HELX_P12 AB3 GLN B 78 ? THR B 91 ? GLN B 79 THR B 92 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale both ? A GLY 1 N ? ? ? 1_555 C MYR . C1 ? ? A GLY 2 A MYR 101 1_555 ? ? ? ? ? ? ? 1.391 sing covale2 covale both ? B GLY 1 N ? ? ? 1_555 D MYR . C1 ? ? B GLY 2 B MYR 101 1_555 ? ? ? ? ? ? ? 1.8 sing # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A MYR 101 ? 10 'binding site for residue MYR A 101' AC2 Software B MYR 101 ? 8 'binding site for residue MYR B 101' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 10 GLY A 1 ? GLY A 2 . ? 1_555 ? 2 AC1 10 VAL A 2 ? VAL A 3 . ? 1_555 ? 3 AC1 10 PRO A 46 ? PRO A 47 . ? 1_555 ? 4 AC1 10 GLU A 47 ? GLU A 48 . ? 1_555 ? 5 AC1 10 GLY B 1 ? GLY B 2 . ? 5_555 ? 6 AC1 10 GLY B 7 ? GLY B 8 . ? 1_555 ? 7 AC1 10 PHE B 11 ? PHE B 12 . ? 1_555 ? 8 AC1 10 TYR B 35 ? TYR B 36 . ? 1_555 ? 9 AC1 10 LEU B 51 ? LEU B 52 . ? 1_555 ? 10 AC1 10 MYR D . ? MYR B 101 . ? 5_555 ? 11 AC2 8 GLY A 7 ? GLY A 8 . ? 5_555 ? 12 AC2 8 PHE A 11 ? PHE A 12 . ? 5_555 ? 13 AC2 8 LEU A 86 ? LEU A 87 . ? 5_555 ? 14 AC2 8 MYR C . ? MYR A 101 . ? 5_555 ? 15 AC2 8 GLY B 1 ? GLY B 2 . ? 1_555 ? 16 AC2 8 VAL B 2 ? VAL B 3 . ? 1_555 ? 17 AC2 8 PRO B 46 ? PRO B 47 . ? 5_555 ? 18 AC2 8 GLU B 47 ? GLU B 48 . ? 5_555 ? # _atom_sites.entry_id 4ZV5 _atom_sites.fract_transf_matrix[1][1] 0.016148 _atom_sites.fract_transf_matrix[1][2] 0.009323 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.018646 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011104 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 2 2 GLY GLY A . n A 1 2 VAL 2 3 3 VAL VAL A . n A 1 3 SER 3 4 4 SER SER A . n A 1 4 GLY 4 5 5 GLY GLY A . n A 1 5 SER 5 6 6 SER SER A . n A 1 6 LYS 6 7 7 LYS LYS A . n A 1 7 GLY 7 8 8 GLY GLY A . n A 1 8 GLN 8 9 9 GLN GLN A . n A 1 9 LYS 9 10 10 LYS LYS A . n A 1 10 LEU 10 11 11 LEU LEU A . n A 1 11 PHE 11 12 12 PHE PHE A . n A 1 12 VAL 12 13 13 VAL VAL A . n A 1 13 SER 13 14 14 SER SER A . n A 1 14 VAL 14 15 15 VAL VAL A . n A 1 15 LEU 15 16 16 LEU LEU A . n A 1 16 GLN 16 17 17 GLN GLN A . n A 1 17 ARG 17 18 18 ARG ARG A . n A 1 18 LEU 18 19 19 LEU LEU A . n A 1 19 LEU 19 20 20 LEU LEU A . n A 1 20 SER 20 21 21 SER SER A . n A 1 21 GLU 21 22 22 GLU GLU A . n A 1 22 ARG 22 23 23 ARG ARG A . n A 1 23 GLY 23 24 24 GLY GLY A . n A 1 24 LEU 24 25 25 LEU LEU A . n A 1 25 HIS 25 26 26 HIS HIS A . n A 1 26 VAL 26 27 27 VAL VAL A . n A 1 27 LYS 27 28 28 LYS LYS A . n A 1 28 GLU 28 29 29 GLU GLU A . n A 1 29 SER 29 30 30 SER SER A . n A 1 30 SER 30 31 31 SER SER A . n A 1 31 ALA 31 32 32 ALA ALA A . n A 1 32 ILE 32 33 33 ILE ILE A . n A 1 33 GLU 33 34 34 GLU GLU A . n A 1 34 PHE 34 35 35 PHE PHE A . n A 1 35 TYR 35 36 36 TYR TYR A . n A 1 36 GLN 36 37 37 GLN GLN A . n A 1 37 PHE 37 38 38 PHE PHE A . n A 1 38 LEU 38 39 39 LEU LEU A . n A 1 39 ILE 39 40 40 ILE ILE A . n A 1 40 LYS 40 41 41 LYS LYS A . n A 1 41 VAL 41 42 42 VAL VAL A . n A 1 42 SER 42 43 43 SER SER A . n A 1 43 PRO 43 44 44 PRO PRO A . n A 1 44 TRP 44 45 45 TRP TRP A . n A 1 45 PHE 45 46 46 PHE PHE A . n A 1 46 PRO 46 47 47 PRO PRO A . n A 1 47 GLU 47 48 48 GLU GLU A . n A 1 48 GLU 48 49 49 GLU GLU A . n A 1 49 GLY 49 50 50 GLY GLY A . n A 1 50 GLY 50 51 51 GLY GLY A . n A 1 51 LEU 51 52 52 LEU LEU A . n A 1 52 ASN 52 53 53 ASN ASN A . n A 1 53 LEU 53 54 54 LEU LEU A . n A 1 54 GLN 54 55 55 GLN GLN A . n A 1 55 ASP 55 56 56 ASP ASP A . n A 1 56 TRP 56 57 57 TRP TRP A . n A 1 57 LYS 57 58 58 LYS LYS A . n A 1 58 ARG 58 59 59 ARG ARG A . n A 1 59 VAL 59 60 60 VAL VAL A . n A 1 60 GLY 60 61 61 GLY GLY A . n A 1 61 ARG 61 62 62 ARG ARG A . n A 1 62 GLU 62 63 63 GLU GLU A . n A 1 63 MET 63 64 64 MET MET A . n A 1 64 LYS 64 65 65 LYS LYS A . n A 1 65 ARG 65 66 66 ARG ARG A . n A 1 66 TYR 66 67 67 TYR TYR A . n A 1 67 ALA 67 68 68 ALA ALA A . n A 1 68 ALA 68 69 69 ALA ALA A . n A 1 69 GLU 69 70 70 GLU GLU A . n A 1 70 HIS 70 71 71 HIS HIS A . n A 1 71 GLY 71 72 72 GLY GLY A . n A 1 72 THR 72 73 73 THR THR A . n A 1 73 ASP 73 74 74 ASP ASP A . n A 1 74 SER 74 75 75 SER SER A . n A 1 75 ILE 75 76 76 ILE ILE A . n A 1 76 PRO 76 77 77 PRO PRO A . n A 1 77 LYS 77 78 78 LYS LYS A . n A 1 78 GLN 78 79 79 GLN GLN A . n A 1 79 ALA 79 80 80 ALA ALA A . n A 1 80 TYR 80 81 81 TYR TYR A . n A 1 81 PRO 81 82 82 PRO PRO A . n A 1 82 ILE 82 83 83 ILE ILE A . n A 1 83 TRP 83 84 84 TRP TRP A . n A 1 84 LEU 84 85 85 LEU LEU A . n A 1 85 GLN 85 86 86 GLN GLN A . n A 1 86 LEU 86 87 87 LEU LEU A . n A 1 87 ARG 87 88 88 ARG ARG A . n A 1 88 GLU 88 89 89 GLU GLU A . n A 1 89 ILE 89 90 90 ILE ILE A . n A 1 90 LEU 90 91 91 LEU LEU A . n A 1 91 THR 91 92 92 THR THR A . n B 1 1 GLY 1 2 2 GLY GLY B . n B 1 2 VAL 2 3 3 VAL VAL B . n B 1 3 SER 3 4 4 SER SER B . n B 1 4 GLY 4 5 5 GLY GLY B . n B 1 5 SER 5 6 6 SER SER B . n B 1 6 LYS 6 7 7 LYS LYS B . n B 1 7 GLY 7 8 8 GLY GLY B . n B 1 8 GLN 8 9 9 GLN GLN B . n B 1 9 LYS 9 10 10 LYS LYS B . n B 1 10 LEU 10 11 11 LEU LEU B . n B 1 11 PHE 11 12 12 PHE PHE B . n B 1 12 VAL 12 13 13 VAL VAL B . n B 1 13 SER 13 14 14 SER SER B . n B 1 14 VAL 14 15 15 VAL VAL B . n B 1 15 LEU 15 16 16 LEU LEU B . n B 1 16 GLN 16 17 17 GLN GLN B . n B 1 17 ARG 17 18 18 ARG ARG B . n B 1 18 LEU 18 19 19 LEU LEU B . n B 1 19 LEU 19 20 20 LEU LEU B . n B 1 20 SER 20 21 21 SER SER B . n B 1 21 GLU 21 22 22 GLU GLU B . n B 1 22 ARG 22 23 23 ARG ARG B . n B 1 23 GLY 23 24 24 GLY GLY B . n B 1 24 LEU 24 25 25 LEU LEU B . n B 1 25 HIS 25 26 26 HIS HIS B . n B 1 26 VAL 26 27 27 VAL VAL B . n B 1 27 LYS 27 28 28 LYS LYS B . n B 1 28 GLU 28 29 29 GLU GLU B . n B 1 29 SER 29 30 30 SER SER B . n B 1 30 SER 30 31 31 SER SER B . n B 1 31 ALA 31 32 32 ALA ALA B . n B 1 32 ILE 32 33 33 ILE ILE B . n B 1 33 GLU 33 34 34 GLU GLU B . n B 1 34 PHE 34 35 35 PHE PHE B . n B 1 35 TYR 35 36 36 TYR TYR B . n B 1 36 GLN 36 37 37 GLN GLN B . n B 1 37 PHE 37 38 38 PHE PHE B . n B 1 38 LEU 38 39 39 LEU LEU B . n B 1 39 ILE 39 40 40 ILE ILE B . n B 1 40 LYS 40 41 41 LYS LYS B . n B 1 41 VAL 41 42 42 VAL VAL B . n B 1 42 SER 42 43 43 SER SER B . n B 1 43 PRO 43 44 44 PRO PRO B . n B 1 44 TRP 44 45 45 TRP TRP B . n B 1 45 PHE 45 46 46 PHE PHE B . n B 1 46 PRO 46 47 47 PRO PRO B . n B 1 47 GLU 47 48 48 GLU GLU B . n B 1 48 GLU 48 49 49 GLU GLU B . n B 1 49 GLY 49 50 50 GLY GLY B . n B 1 50 GLY 50 51 51 GLY GLY B . n B 1 51 LEU 51 52 52 LEU LEU B . n B 1 52 ASN 52 53 53 ASN ASN B . n B 1 53 LEU 53 54 54 LEU LEU B . n B 1 54 GLN 54 55 55 GLN GLN B . n B 1 55 ASP 55 56 56 ASP ASP B . n B 1 56 TRP 56 57 57 TRP TRP B . n B 1 57 LYS 57 58 58 LYS LYS B . n B 1 58 ARG 58 59 59 ARG ARG B . n B 1 59 VAL 59 60 60 VAL VAL B . n B 1 60 GLY 60 61 61 GLY GLY B . n B 1 61 ARG 61 62 62 ARG ARG B . n B 1 62 GLU 62 63 63 GLU GLU B . n B 1 63 MET 63 64 64 MET MET B . n B 1 64 LYS 64 65 65 LYS LYS B . n B 1 65 ARG 65 66 66 ARG ARG B . n B 1 66 TYR 66 67 67 TYR TYR B . n B 1 67 ALA 67 68 68 ALA ALA B . n B 1 68 ALA 68 69 69 ALA ALA B . n B 1 69 GLU 69 70 70 GLU GLU B . n B 1 70 HIS 70 71 71 HIS HIS B . n B 1 71 GLY 71 72 72 GLY GLY B . n B 1 72 THR 72 73 73 THR THR B . n B 1 73 ASP 73 74 74 ASP ASP B . n B 1 74 SER 74 75 75 SER SER B . n B 1 75 ILE 75 76 76 ILE ILE B . n B 1 76 PRO 76 77 77 PRO PRO B . n B 1 77 LYS 77 78 78 LYS LYS B . n B 1 78 GLN 78 79 79 GLN GLN B . n B 1 79 ALA 79 80 80 ALA ALA B . n B 1 80 TYR 80 81 81 TYR TYR B . n B 1 81 PRO 81 82 82 PRO PRO B . n B 1 82 ILE 82 83 83 ILE ILE B . n B 1 83 TRP 83 84 84 TRP TRP B . n B 1 84 LEU 84 85 85 LEU LEU B . n B 1 85 GLN 85 86 86 GLN GLN B . n B 1 86 LEU 86 87 87 LEU LEU B . n B 1 87 ARG 87 88 88 ARG ARG B . n B 1 88 GLU 88 89 89 GLU GLU B . n B 1 89 ILE 89 90 90 ILE ILE B . n B 1 90 LEU 90 91 91 LEU LEU B . n B 1 91 THR 91 92 92 THR THR B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 MYR 1 101 101 MYR MYR A . D 2 MYR 1 101 101 MYR MYR B . E 3 HOH 1 201 219 HOH HOH A . E 3 HOH 2 202 237 HOH HOH A . E 3 HOH 3 203 223 HOH HOH A . E 3 HOH 4 204 220 HOH HOH A . E 3 HOH 5 205 234 HOH HOH A . E 3 HOH 6 206 216 HOH HOH A . E 3 HOH 7 207 222 HOH HOH A . E 3 HOH 8 208 224 HOH HOH A . E 3 HOH 9 209 235 HOH HOH A . E 3 HOH 10 210 209 HOH HOH A . E 3 HOH 11 211 233 HOH HOH A . E 3 HOH 12 212 206 HOH HOH A . E 3 HOH 13 213 230 HOH HOH A . E 3 HOH 14 214 210 HOH HOH A . E 3 HOH 15 215 201 HOH HOH A . E 3 HOH 16 216 214 HOH HOH A . E 3 HOH 17 217 225 HOH HOH A . E 3 HOH 18 218 227 HOH HOH A . E 3 HOH 19 219 211 HOH HOH A . E 3 HOH 20 220 228 HOH HOH A . E 3 HOH 21 221 218 HOH HOH A . E 3 HOH 22 222 202 HOH HOH A . E 3 HOH 23 223 229 HOH HOH A . E 3 HOH 24 224 204 HOH HOH A . E 3 HOH 25 225 236 HOH HOH A . E 3 HOH 26 226 207 HOH HOH A . E 3 HOH 27 227 221 HOH HOH A . E 3 HOH 28 228 213 HOH HOH A . E 3 HOH 29 229 232 HOH HOH A . E 3 HOH 30 230 210 HOH HOH A . E 3 HOH 31 231 203 HOH HOH A . E 3 HOH 32 232 215 HOH HOH A . E 3 HOH 33 233 226 HOH HOH A . E 3 HOH 34 234 212 HOH HOH A . E 3 HOH 35 235 217 HOH HOH A . E 3 HOH 36 236 208 HOH HOH A . E 3 HOH 37 237 220 HOH HOH A . E 3 HOH 38 238 219 HOH HOH A . E 3 HOH 39 239 238 HOH HOH A . F 3 HOH 1 201 247 HOH HOH B . F 3 HOH 2 202 242 HOH HOH B . F 3 HOH 3 203 249 HOH HOH B . F 3 HOH 4 204 236 HOH HOH B . F 3 HOH 5 205 224 HOH HOH B . F 3 HOH 6 206 235 HOH HOH B . F 3 HOH 7 207 248 HOH HOH B . F 3 HOH 8 208 233 HOH HOH B . F 3 HOH 9 209 212 HOH HOH B . F 3 HOH 10 210 218 HOH HOH B . F 3 HOH 11 211 217 HOH HOH B . F 3 HOH 12 212 204 HOH HOH B . F 3 HOH 13 213 226 HOH HOH B . F 3 HOH 14 214 231 HOH HOH B . F 3 HOH 15 215 207 HOH HOH B . F 3 HOH 16 216 205 HOH HOH B . F 3 HOH 17 217 206 HOH HOH B . F 3 HOH 18 218 205 HOH HOH B . F 3 HOH 19 219 230 HOH HOH B . F 3 HOH 20 220 240 HOH HOH B . F 3 HOH 21 221 231 HOH HOH B . F 3 HOH 22 222 237 HOH HOH B . F 3 HOH 23 223 229 HOH HOH B . F 3 HOH 24 224 244 HOH HOH B . F 3 HOH 25 225 232 HOH HOH B . F 3 HOH 26 226 202 HOH HOH B . F 3 HOH 27 227 234 HOH HOH B . F 3 HOH 28 228 225 HOH HOH B . F 3 HOH 29 229 214 HOH HOH B . F 3 HOH 30 230 215 HOH HOH B . F 3 HOH 31 231 241 HOH HOH B . F 3 HOH 32 232 227 HOH HOH B . F 3 HOH 33 233 208 HOH HOH B . F 3 HOH 34 234 239 HOH HOH B . F 3 HOH 35 235 222 HOH HOH B . F 3 HOH 36 236 211 HOH HOH B . F 3 HOH 37 237 245 HOH HOH B . F 3 HOH 38 238 243 HOH HOH B . F 3 HOH 39 239 209 HOH HOH B . F 3 HOH 40 240 228 HOH HOH B . F 3 HOH 41 241 221 HOH HOH B . F 3 HOH 42 242 203 HOH HOH B . F 3 HOH 43 243 216 HOH HOH B . F 3 HOH 44 244 201 HOH HOH B . F 3 HOH 45 245 238 HOH HOH B . F 3 HOH 46 246 223 HOH HOH B . F 3 HOH 47 247 213 HOH HOH B . F 3 HOH 48 248 246 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 2240 ? 1 MORE -2 ? 1 'SSA (A^2)' 10400 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2016-01-27 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.900 _diffrn_reflns.pdbx_d_res_low ? _diffrn_reflns.pdbx_Rmerge_I_obs 0.036 _diffrn_reflns.pdbx_Rsym_value ? _diffrn_reflns.pdbx_chi_squared ? _diffrn_reflns.pdbx_redundancy ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 4.02 5.66 ? 0.022 ? ? ? ? 1 3.28 4.02 ? 0.029 ? ? ? ? 1 2.85 3.28 ? 0.031 ? ? ? ? 1 2.55 2.85 ? 0.041 ? ? ? ? 1 2.33 2.55 ? 0.057 ? ? ? ? 1 2.15 2.33 ? 0.080 ? ? ? ? 1 2.01 2.15 ? 0.143 ? ? ? ? 1 1.90 2.01 ? 0.201 ? ? ? ? # _phasing.method SIRAS # loop_ _software.citation_id _software.classification _software.compiler_name _software.compiler_version _software.contact_author _software.contact_author_email _software.date _software.description _software.dependencies _software.hardware _software.language _software.location _software.mods _software.name _software.os _software.os_version _software.type _software.version _software.pdbx_ordinal ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XDS ? ? ? . 1 ? 'data extraction' ? ? ? ? ? ? ? ? ? ? ? PDB_EXTRACT ? ? ? 3.11 2 ? 'data scaling' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 3 ? refinement ? ? ? ? ? ? ? ? ? ? ? REFMAC ? ? ? 5.6.0117 4 ? phasing ? ? ? ? ? ? ? ? ? ? ? SHELXD ? ? ? . 5 ? 'data reduction' ? ? ? ? ? ? ? ? ? ? ? XSCALE ? ? ? . 6 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 OE1 B GLN 17 ? B O B HOH 202 ? ? 2.00 2 1 O B HOH 202 ? ? O B HOH 205 ? ? 2.01 3 1 CA A GLY 2 ? ? C1 A MYR 101 ? ? 2.11 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 238 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 B _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 220 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 5_565 _pdbx_validate_symm_contact.dist 1.76 # _pdbx_validate_torsion.id 1 _pdbx_validate_torsion.PDB_model_num 1 _pdbx_validate_torsion.auth_comp_id SER _pdbx_validate_torsion.auth_asym_id A _pdbx_validate_torsion.auth_seq_id 4 _pdbx_validate_torsion.PDB_ins_code ? _pdbx_validate_torsion.label_alt_id ? _pdbx_validate_torsion.phi -178.58 _pdbx_validate_torsion.psi 107.24 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER 6 ? OG ? A SER 5 OG 2 1 Y 1 A GLU 70 ? CG ? A GLU 69 CG 3 1 Y 1 A GLU 70 ? CD ? A GLU 69 CD 4 1 Y 1 A GLU 70 ? OE1 ? A GLU 69 OE1 5 1 Y 1 A GLU 70 ? OE2 ? A GLU 69 OE2 6 1 Y 1 A LYS 78 ? CE ? A LYS 77 CE 7 1 Y 1 A LYS 78 ? NZ ? A LYS 77 NZ 8 1 Y 1 B LYS 78 ? CE ? B LYS 77 CE 9 1 Y 1 B LYS 78 ? NZ ? B LYS 77 NZ # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'MYRISTIC ACID' MYR 3 water HOH #