HEADER TRANSFERASE 19-MAY-15 4ZWV TITLE CRYSTAL STRUCTURE OF AMINOTRANSFERASE ATMS13 FROM ACTINOMADURA TITLE 2 MELLIAURA COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE AMINOTRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACTINOMADURA MELLIAURA; SOURCE 3 ORGANISM_TAXID: 360723; SOURCE 4 GENE: ATS13; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PMCSG68 KEYWDS AMINOTRANSFERASE, STRUCTURAL GENOMICS, PSI-BIOLOGY, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, ENZYME DISCOVERY FOR NATURAL PRODUCT BIOSYNTHESIS, KEYWDS 3 NATPRO, MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.KIM,L.BIGELOW,M.ENDRES,F.WANG,G.N.PHILLIPS JR.,A.JOACHIMIAK,ENZYME AUTHOR 2 DISCOVERY FOR NATURAL PRODUCT BIOSYNTHESIS (NATPRO),MIDWEST CENTER AUTHOR 3 FOR STRUCTURAL GENOMICS (MCSG) REVDAT 7 04-DEC-19 4ZWV 1 REMARK REVDAT 6 27-SEP-17 4ZWV 1 COMPND REMARK HETNAM FORMUL REVDAT 5 14-OCT-15 4ZWV 1 REMARK REVDAT 4 29-JUL-15 4ZWV 1 JRNL REVDAT 3 01-JUL-15 4ZWV 1 KEYWDS REVDAT 2 24-JUN-15 4ZWV 1 JRNL REVDAT 1 03-JUN-15 4ZWV 0 SPRSDE 03-JUN-15 4ZWV 4RXK JRNL AUTH S.SINGH,Y.KIM,F.WANG,L.BIGELOW,M.ENDRES,M.K.KHAREL, JRNL AUTH 2 G.BABNIGG,C.A.BINGMAN,A.JOACHIMIAK,J.S.THORSON,G.N.PHILLIPS JRNL TITL STRUCTURAL CHARACTERIZATION OF ATMS13, A PUTATIVE SUGAR JRNL TITL 2 AMINOTRANSFERASE INVOLVED IN INDOLOCARBAZOLE AT2433 JRNL TITL 3 AMINOPENTOSE BIOSYNTHESIS. JRNL REF PROTEINS V. 83 1547 2015 JRNL REFN ESSN 1097-0134 JRNL PMID 26061967 JRNL DOI 10.1002/PROT.24844 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 49.59 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 250342 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.167 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.020 REMARK 3 FREE R VALUE TEST SET COUNT : 12571 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 49.6129 - 4.6685 0.94 7832 395 0.1420 0.1629 REMARK 3 2 4.6685 - 3.7059 0.97 7966 456 0.1157 0.1361 REMARK 3 3 3.7059 - 3.2375 0.97 7986 477 0.1284 0.1455 REMARK 3 4 3.2375 - 2.9416 0.98 8083 416 0.1420 0.1613 REMARK 3 5 2.9416 - 2.7307 0.98 8152 425 0.1466 0.1804 REMARK 3 6 2.7307 - 2.5698 0.98 8095 425 0.1406 0.1522 REMARK 3 7 2.5698 - 2.4411 0.99 8185 425 0.1443 0.1632 REMARK 3 8 2.4411 - 2.3348 0.98 8230 383 0.1391 0.1551 REMARK 3 9 2.3348 - 2.2449 0.99 8242 425 0.1373 0.1668 REMARK 3 10 2.2449 - 2.1675 0.99 8148 404 0.1405 0.1679 REMARK 3 11 2.1675 - 2.0997 0.99 8214 444 0.1426 0.1632 REMARK 3 12 2.0997 - 2.0397 0.99 8246 434 0.1382 0.1548 REMARK 3 13 2.0397 - 1.9860 0.99 8273 400 0.1426 0.1839 REMARK 3 14 1.9860 - 1.9375 0.99 8238 461 0.1433 0.1419 REMARK 3 15 1.9375 - 1.8935 0.99 8176 435 0.1488 0.1698 REMARK 3 16 1.8935 - 1.8532 0.99 8279 426 0.1480 0.1715 REMARK 3 17 1.8532 - 1.8161 0.99 8301 423 0.1472 0.1806 REMARK 3 18 1.8161 - 1.7818 0.99 8116 440 0.1513 0.1670 REMARK 3 19 1.7818 - 1.7500 0.99 8358 394 0.1483 0.1835 REMARK 3 20 1.7500 - 1.7203 0.99 8243 410 0.1573 0.1929 REMARK 3 21 1.7203 - 1.6926 1.00 8184 504 0.1642 0.1717 REMARK 3 22 1.6926 - 1.6665 1.00 8250 443 0.1724 0.1851 REMARK 3 23 1.6665 - 1.6420 1.00 8252 430 0.1846 0.2224 REMARK 3 24 1.6420 - 1.6189 0.98 8069 460 0.1939 0.2224 REMARK 3 25 1.6189 - 1.5970 0.96 8016 440 0.1936 0.2335 REMARK 3 26 1.5970 - 1.5763 0.93 7762 432 0.2033 0.2074 REMARK 3 27 1.5763 - 1.5566 0.87 7233 374 0.2065 0.2182 REMARK 3 28 1.5566 - 1.5378 0.82 6764 376 0.2116 0.2309 REMARK 3 29 1.5378 - 1.5199 0.76 6338 325 0.2242 0.2583 REMARK 3 30 1.5199 - 1.5029 0.68 5540 289 0.2363 0.2407 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 16.010 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.79 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.73 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 6475 REMARK 3 ANGLE : 1.104 8870 REMARK 3 CHIRALITY : 0.045 952 REMARK 3 PLANARITY : 0.006 1181 REMARK 3 DIHEDRAL : 13.234 2414 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN 'A' AND RESID 0 THROUGH 369) REMARK 3 ORIGIN FOR THE GROUP (A): 24.4360 70.4995 12.7621 REMARK 3 T TENSOR REMARK 3 T11: 0.0841 T22: 0.0790 REMARK 3 T33: 0.1015 T12: -0.0091 REMARK 3 T13: -0.0049 T23: -0.0042 REMARK 3 L TENSOR REMARK 3 L11: 0.5766 L22: 0.7330 REMARK 3 L33: 0.6120 L12: -0.0053 REMARK 3 L13: -0.0206 L23: 0.2279 REMARK 3 S TENSOR REMARK 3 S11: 0.0175 S12: -0.0563 S13: 0.1140 REMARK 3 S21: 0.0467 S22: -0.0430 S23: 0.0756 REMARK 3 S31: -0.0421 S32: -0.0568 S33: 0.0173 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN 'B' AND RESID 0 THROUGH 369) REMARK 3 ORIGIN FOR THE GROUP (A): 27.1854 38.6697 3.3028 REMARK 3 T TENSOR REMARK 3 T11: 0.0790 T22: 0.0751 REMARK 3 T33: 0.0763 T12: -0.0077 REMARK 3 T13: -0.0055 T23: 0.0051 REMARK 3 L TENSOR REMARK 3 L11: 0.6827 L22: 0.8058 REMARK 3 L33: 0.5746 L12: -0.0382 REMARK 3 L13: -0.2254 L23: 0.2178 REMARK 3 S TENSOR REMARK 3 S11: -0.0192 S12: 0.0591 S13: -0.0710 REMARK 3 S21: 0.0088 S22: -0.0163 S23: 0.0062 REMARK 3 S31: 0.0750 S32: -0.0408 S33: 0.0285 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : 1 REMARK 3 NCS GROUP : 1 REMARK 3 NCS OPERATOR : 1 REMARK 3 REFERENCE SELECTION: CHAIN A REMARK 3 SELECTION : CHAIN B REMARK 3 ATOM PAIRS NUMBER : 3290 REMARK 3 RMSD : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZWV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000210046. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97929 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 250365 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 200 DATA REDUNDANCY : 4.300 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.59 REMARK 200 COMPLETENESS FOR SHELL (%) : 80.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.32100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: NULL REMARK 200 SOFTWARE USED: PHENIX, SHELXDE, HKL-3000 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.53 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M MAGNESIUM CHLORIDE, 20 % (W/V) REMARK 280 PEG3350, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 102.06850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 36.51250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 102.06850 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 36.51250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5880 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 26020 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -33.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 793 O HOH A 843 2.02 REMARK 500 O LEU B 26 O HOH B 502 2.04 REMARK 500 O HOH B 802 O HOH B 846 2.04 REMARK 500 O HOH A 615 O HOH A 621 2.07 REMARK 500 O HOH B 773 O HOH B 883 2.09 REMARK 500 O3 LLP A 187 O HOH A 502 2.09 REMARK 500 O HOH A 515 O HOH A 815 2.10 REMARK 500 O HOH B 606 O HOH B 1008 2.10 REMARK 500 O HOH A 599 O HOH A 1009 2.10 REMARK 500 O HOH A 621 O HOH A 689 2.11 REMARK 500 O LEU A 26 O HOH A 503 2.11 REMARK 500 O HOH B 602 O HOH B 924 2.12 REMARK 500 O HOH A 811 O HOH A 879 2.12 REMARK 500 O HOH A 913 O HOH A 992 2.12 REMARK 500 O HOH A 857 O HOH A 1009 2.12 REMARK 500 O HOH A 715 O HOH A 963 2.13 REMARK 500 OE2 GLU A 19 O HOH A 504 2.13 REMARK 500 O HOH B 897 O HOH B 956 2.14 REMARK 500 O HOH B 540 O HOH B 605 2.15 REMARK 500 O HOH B 806 O HOH B 931 2.15 REMARK 500 O HOH A 787 O HOH A 1013 2.16 REMARK 500 NE ARG A 63 O HOH A 505 2.16 REMARK 500 O HOH A 523 O HOH A 879 2.16 REMARK 500 O HOH A 897 O HOH A 964 2.16 REMARK 500 O HOH A 552 O HOH B 912 2.16 REMARK 500 O HOH A 753 O HOH A 971 2.16 REMARK 500 NH1 ARG A 258 O HOH A 506 2.16 REMARK 500 O HOH B 568 O HOH B 638 2.17 REMARK 500 O HOH A 703 O HOH A 806 2.17 REMARK 500 OD1 ASP A 254 O HOH A 507 2.17 REMARK 500 O HOH A 592 O HOH A 971 2.17 REMARK 500 O HOH B 559 O HOH B 695 2.17 REMARK 500 O HOH B 694 O HOH B 871 2.17 REMARK 500 O HOH A 502 O HOH A 877 2.18 REMARK 500 O HOH B 875 O HOH B 932 2.18 REMARK 500 O HOH A 628 O HOH A 953 2.18 REMARK 500 O HOH A 1038 O HOH B 699 2.18 REMARK 500 O TRP A 128 O HOH A 508 2.18 REMARK 500 O HOH A 945 O HOH A 998 2.18 REMARK 500 O HOH A 506 O HOH A 948 2.18 REMARK 500 O TYR A 131 O HOH A 508 2.19 REMARK 500 NH1 ARG B 258 O HOH B 503 2.19 REMARK 500 O HOH A 683 O HOH A 945 2.19 REMARK 500 O HOH A 535 O HOH A 695 2.19 REMARK 500 NH1 ARG B 343 O HOH B 504 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1000 O HOH B 604 4555 2.11 REMARK 500 O HOH A 809 O HOH B 1069 1565 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 226 59.52 -90.21 REMARK 500 LEU A 234 -159.48 -112.93 REMARK 500 VAL A 349 -0.02 -143.02 REMARK 500 LEU B 234 -159.22 -112.77 REMARK 500 VAL B 349 -0.52 -143.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1072 DISTANCE = 5.84 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC109739 RELATED DB: TARGETTRACK DBREF 4ZWV A 1 369 UNP Q0H2X1 Q0H2X1_9ACTO 1 369 DBREF 4ZWV B 1 369 UNP Q0H2X1 Q0H2X1_9ACTO 1 369 SEQADV 4ZWV SER A -2 UNP Q0H2X1 EXPRESSION TAG SEQADV 4ZWV ASN A -1 UNP Q0H2X1 EXPRESSION TAG SEQADV 4ZWV ALA A 0 UNP Q0H2X1 EXPRESSION TAG SEQADV 4ZWV SER B -2 UNP Q0H2X1 EXPRESSION TAG SEQADV 4ZWV ASN B -1 UNP Q0H2X1 EXPRESSION TAG SEQADV 4ZWV ALA B 0 UNP Q0H2X1 EXPRESSION TAG SEQRES 1 A 372 SER ASN ALA MSE ILE PRO LEU PHE LYS VAL ALA VAL SER SEQRES 2 A 372 PRO THR ALA LEU ASP ARG VAL ALA GLU VAL PHE ALA SER SEQRES 3 A 372 GLY TYR LEU GLY GLN GLY PRO ARG VAL ALA GLU PHE GLU SEQRES 4 A 372 SER ALA LEU ALA ALA ARG LEU GLY ASN PRO ARG VAL VAL SEQRES 5 A 372 SER VAL HIS SER GLY THR SER GLY LEU CYS LEU ALA LEU SEQRES 6 A 372 ARG LEU LEU ASP ALA PRO GLU GLU ARG ASP GLU VAL LEU SEQRES 7 A 372 SER THR PRO LEU THR PHE GLU ALA THR ASN TRP ALA ILE SEQRES 8 A 372 LEU ALA ASP GLY ARG ARG ILE THR TRP VAL ASP VAL ASP SEQRES 9 A 372 PRO ALA THR LEU THR MSE ASP LEU ASP ASP LEU GLU ARG SEQRES 10 A 372 LYS ILE SER PRO ALA THR ARG ALA ILE ILE VAL VAL HIS SEQRES 11 A 372 TRP THR GLY TYR PRO VAL ASP LEU ASP ARG LEU ALA GLY SEQRES 12 A 372 ILE LEU ASP ARG ALA GLU ARG GLU HIS GLY PHE ARG PRO SEQRES 13 A 372 ALA VAL ILE GLU ASP CYS ALA HIS ALA TRP GLY ALA SER SEQRES 14 A 372 TYR ARG GLY VAL PRO LEU GLY SER HIS GLY ASN MSE CYS SEQRES 15 A 372 VAL PHE SER PHE GLN ALA LEU LLP HIS LEU THR CYS GLY SEQRES 16 A 372 ASP GLY GLY LEU LEU THR LEU PRO GLY ASP GLU LEU HIS SEQRES 17 A 372 GLU ARG ALA MSE LEU ARG ARG PHE TYR GLY ILE ASP ARG SEQRES 18 A 372 THR ALA ASP ARG LEU ARG GLY ALA TYR ASP VAL ALA GLU SEQRES 19 A 372 TRP GLY LEU LYS TRP HIS MSE THR ASP LEU ASN ALA ALA SEQRES 20 A 372 ILE GLY LEU ALA ASN LEU GLU THR VAL ASP GLU GLN LEU SEQRES 21 A 372 ARG LEU HIS ARG GLU ASN ALA ALA PHE TYR ASP LYS GLU SEQRES 22 A 372 LEU THR GLY VAL PRO GLY LEU GLU LEU LEU GLN ARG SER SEQRES 23 A 372 PRO ASP ARG GLU GLY SER PHE TYR VAL TYR ASP VAL LYS SEQRES 24 A 372 VAL ASP ASP ARG PRO ALA PHE HIS ARG LYS MSE GLU ALA SEQRES 25 A 372 ALA GLY ILE MSE ALA GLY LEU VAL SER ARG ARG ASN ASP SEQRES 26 A 372 GLU HIS SER CYS VAL ALA HIS LEU ARG THR SER LEU PRO SEQRES 27 A 372 GLY LEU ASP SER VAL TYR ASP ARG MSE VAL SER LEU PRO SEQRES 28 A 372 VAL GLY TRP TRP LEU THR GLU GLN ASP ARG GLU HIS VAL SEQRES 29 A 372 VAL ALA THR ILE ARG SER GLY TRP SEQRES 1 B 372 SER ASN ALA MSE ILE PRO LEU PHE LYS VAL ALA VAL SER SEQRES 2 B 372 PRO THR ALA LEU ASP ARG VAL ALA GLU VAL PHE ALA SER SEQRES 3 B 372 GLY TYR LEU GLY GLN GLY PRO ARG VAL ALA GLU PHE GLU SEQRES 4 B 372 SER ALA LEU ALA ALA ARG LEU GLY ASN PRO ARG VAL VAL SEQRES 5 B 372 SER VAL HIS SER GLY THR SER GLY LEU CYS LEU ALA LEU SEQRES 6 B 372 ARG LEU LEU ASP ALA PRO GLU GLU ARG ASP GLU VAL LEU SEQRES 7 B 372 SER THR PRO LEU THR PHE GLU ALA THR ASN TRP ALA ILE SEQRES 8 B 372 LEU ALA ASP GLY ARG ARG ILE THR TRP VAL ASP VAL ASP SEQRES 9 B 372 PRO ALA THR LEU THR MSE ASP LEU ASP ASP LEU GLU ARG SEQRES 10 B 372 LYS ILE SER PRO ALA THR ARG ALA ILE ILE VAL VAL HIS SEQRES 11 B 372 TRP THR GLY TYR PRO VAL ASP LEU ASP ARG LEU ALA GLY SEQRES 12 B 372 ILE LEU ASP ARG ALA GLU ARG GLU HIS GLY PHE ARG PRO SEQRES 13 B 372 ALA VAL ILE GLU ASP CYS ALA HIS ALA TRP GLY ALA SER SEQRES 14 B 372 TYR ARG GLY VAL PRO LEU GLY SER HIS GLY ASN MSE CYS SEQRES 15 B 372 VAL PHE SER PHE GLN ALA LEU LLP HIS LEU THR CYS GLY SEQRES 16 B 372 ASP GLY GLY LEU LEU THR LEU PRO GLY ASP GLU LEU HIS SEQRES 17 B 372 GLU ARG ALA MSE LEU ARG ARG PHE TYR GLY ILE ASP ARG SEQRES 18 B 372 THR ALA ASP ARG LEU ARG GLY ALA TYR ASP VAL ALA GLU SEQRES 19 B 372 TRP GLY LEU LYS TRP HIS MSE THR ASP LEU ASN ALA ALA SEQRES 20 B 372 ILE GLY LEU ALA ASN LEU GLU THR VAL ASP GLU GLN LEU SEQRES 21 B 372 ARG LEU HIS ARG GLU ASN ALA ALA PHE TYR ASP LYS GLU SEQRES 22 B 372 LEU THR GLY VAL PRO GLY LEU GLU LEU LEU GLN ARG SER SEQRES 23 B 372 PRO ASP ARG GLU GLY SER PHE TYR VAL TYR ASP VAL LYS SEQRES 24 B 372 VAL ASP ASP ARG PRO ALA PHE HIS ARG LYS MSE GLU ALA SEQRES 25 B 372 ALA GLY ILE MSE ALA GLY LEU VAL SER ARG ARG ASN ASP SEQRES 26 B 372 GLU HIS SER CYS VAL ALA HIS LEU ARG THR SER LEU PRO SEQRES 27 B 372 GLY LEU ASP SER VAL TYR ASP ARG MSE VAL SER LEU PRO SEQRES 28 B 372 VAL GLY TRP TRP LEU THR GLU GLN ASP ARG GLU HIS VAL SEQRES 29 B 372 VAL ALA THR ILE ARG SER GLY TRP MODRES 4ZWV MSE A 1 MET MODIFIED RESIDUE MODRES 4ZWV MSE A 107 MET MODIFIED RESIDUE MODRES 4ZWV MSE A 178 MET MODIFIED RESIDUE MODRES 4ZWV LLP A 187 LYS MODIFIED RESIDUE MODRES 4ZWV MSE A 209 MET MODIFIED RESIDUE MODRES 4ZWV MSE A 238 MET MODIFIED RESIDUE MODRES 4ZWV MSE A 307 MET MODIFIED RESIDUE MODRES 4ZWV MSE A 313 MET MODIFIED RESIDUE MODRES 4ZWV MSE A 344 MET MODIFIED RESIDUE MODRES 4ZWV MSE B 1 MET MODIFIED RESIDUE MODRES 4ZWV MSE B 107 MET MODIFIED RESIDUE MODRES 4ZWV MSE B 178 MET MODIFIED RESIDUE MODRES 4ZWV LLP B 187 LYS MODIFIED RESIDUE MODRES 4ZWV MSE B 209 MET MODIFIED RESIDUE MODRES 4ZWV MSE B 238 MET MODIFIED RESIDUE MODRES 4ZWV MSE B 307 MET MODIFIED RESIDUE MODRES 4ZWV MSE B 313 MET MODIFIED RESIDUE MODRES 4ZWV MSE B 344 MET MODIFIED RESIDUE HET MSE A 1 8 HET MSE A 107 8 HET MSE A 178 8 HET LLP A 187 48 HET MSE A 209 16 HET MSE A 238 8 HET MSE A 307 8 HET MSE A 313 8 HET MSE A 344 8 HET MSE B 1 8 HET MSE B 107 8 HET MSE B 178 8 HET LLP B 187 48 HET MSE B 209 16 HET MSE B 238 8 HET MSE B 307 8 HET MSE B 313 8 HET MSE B 344 8 HET GOL A 401 6 HET GOL A 402 6 HET GOL B 401 6 HET GOL B 402 6 HETNAM MSE SELENOMETHIONINE HETNAM LLP (2S)-2-AMINO-6-[[3-HYDROXY-2-METHYL-5- HETNAM 2 LLP (PHOSPHONOOXYMETHYL)PYRIDIN-4- HETNAM 3 LLP YL]METHYLIDENEAMINO]HEXANOIC ACID HETNAM GOL GLYCEROL HETSYN LLP N'-PYRIDOXYL-LYSINE-5'-MONOPHOSPHATE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 1 MSE 16(C5 H11 N O2 SE) FORMUL 1 LLP 2(C14 H22 N3 O7 P) FORMUL 3 GOL 4(C3 H8 O3) FORMUL 7 HOH *1155(H2 O) HELIX 1 AA1 THR A 12 GLY A 24 1 13 HELIX 2 AA2 GLY A 29 GLY A 44 1 16 HELIX 3 AA3 SER A 53 LEU A 64 1 12 HELIX 4 AA4 PHE A 81 ASP A 91 1 11 HELIX 5 AA5 ASP A 108 ILE A 116 1 9 HELIX 6 AA6 TRP A 128 TYR A 131 5 4 HELIX 7 AA7 ASP A 134 GLY A 150 1 17 HELIX 8 AA8 GLY A 201 ARG A 212 1 12 HELIX 9 AA9 ASP A 221 GLY A 225 5 5 HELIX 10 AB1 THR A 239 LEU A 271 1 33 HELIX 11 AB2 ASP A 299 ALA A 310 1 12 HELIX 12 AB3 ARG A 320 ARG A 331 5 12 HELIX 13 AB4 LEU A 334 ASP A 342 1 9 HELIX 14 AB5 THR A 354 SER A 367 1 14 HELIX 15 AB6 THR B 12 GLY B 24 1 13 HELIX 16 AB7 GLY B 29 GLY B 44 1 16 HELIX 17 AB8 SER B 53 LEU B 64 1 12 HELIX 18 AB9 PHE B 81 ASP B 91 1 11 HELIX 19 AC1 ASP B 108 ILE B 116 1 9 HELIX 20 AC2 TRP B 128 TYR B 131 5 4 HELIX 21 AC3 ASP B 134 GLY B 150 1 17 HELIX 22 AC4 GLY B 201 ARG B 212 1 12 HELIX 23 AC5 ASP B 221 GLY B 225 5 5 HELIX 24 AC6 THR B 239 LEU B 271 1 33 HELIX 25 AC7 ASP B 299 ALA B 310 1 12 HELIX 26 AC8 ARG B 320 ARG B 331 5 12 HELIX 27 AC9 LEU B 334 ASP B 342 1 9 HELIX 28 AD1 THR B 354 SER B 367 1 14 SHEET 1 AA1 7 VAL A 48 VAL A 51 0 SHEET 2 AA1 7 GLY A 195 THR A 198 -1 O LEU A 197 N VAL A 49 SHEET 3 AA1 7 MSE A 178 SER A 182 -1 N PHE A 181 O LEU A 196 SHEET 4 AA1 7 ALA A 154 ASP A 158 1 N GLU A 157 O MSE A 178 SHEET 5 AA1 7 THR A 120 VAL A 126 1 N VAL A 125 O ASP A 158 SHEET 6 AA1 7 GLU A 73 SER A 76 1 N GLU A 73 O ARG A 121 SHEET 7 AA1 7 ARG A 94 TRP A 97 1 O ARG A 94 N VAL A 74 SHEET 1 AA2 3 VAL A 170 PRO A 171 0 SHEET 2 AA2 3 SER A 166 TYR A 167 -1 N TYR A 167 O VAL A 170 SHEET 3 AA2 3 ARG A 286 GLU A 287 -1 O GLU A 287 N SER A 166 SHEET 1 AA3 3 LEU A 277 LEU A 279 0 SHEET 2 AA3 3 TYR A 293 VAL A 297 -1 O LYS A 296 N GLU A 278 SHEET 3 AA3 3 MSE A 344 LEU A 347 -1 O LEU A 347 N TYR A 293 SHEET 1 AA4 7 VAL B 48 VAL B 51 0 SHEET 2 AA4 7 GLY B 195 THR B 198 -1 O LEU B 197 N VAL B 49 SHEET 3 AA4 7 MSE B 178 SER B 182 -1 N PHE B 181 O LEU B 196 SHEET 4 AA4 7 ALA B 154 ASP B 158 1 N GLU B 157 O MSE B 178 SHEET 5 AA4 7 THR B 120 VAL B 126 1 N VAL B 125 O ASP B 158 SHEET 6 AA4 7 GLU B 73 SER B 76 1 N GLU B 73 O ARG B 121 SHEET 7 AA4 7 ARG B 94 TRP B 97 1 O ARG B 94 N VAL B 74 SHEET 1 AA5 3 VAL B 170 PRO B 171 0 SHEET 2 AA5 3 SER B 166 TYR B 167 -1 N TYR B 167 O VAL B 170 SHEET 3 AA5 3 ARG B 286 GLU B 287 -1 O GLU B 287 N SER B 166 SHEET 1 AA6 3 LEU B 277 LEU B 279 0 SHEET 2 AA6 3 TYR B 293 VAL B 297 -1 O LYS B 296 N GLU B 278 SHEET 3 AA6 3 MSE B 344 LEU B 347 -1 O LEU B 347 N TYR B 293 LINK C ALA A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N ILE A 2 1555 1555 1.33 LINK C THR A 106 N MSE A 107 1555 1555 1.33 LINK C MSE A 107 N ASP A 108 1555 1555 1.33 LINK C ASN A 177 N MSE A 178 1555 1555 1.33 LINK C MSE A 178 N CYS A 179 1555 1555 1.33 LINK C LEU A 186 N ALLP A 187 1555 1555 1.33 LINK C LEU A 186 N BLLP A 187 1555 1555 1.33 LINK C ALLP A 187 N HIS A 188 1555 1555 1.33 LINK C BLLP A 187 N HIS A 188 1555 1555 1.34 LINK C ALA A 208 N AMSE A 209 1555 1555 1.33 LINK C ALA A 208 N BMSE A 209 1555 1555 1.33 LINK C AMSE A 209 N LEU A 210 1555 1555 1.33 LINK C BMSE A 209 N LEU A 210 1555 1555 1.33 LINK C HIS A 237 N MSE A 238 1555 1555 1.33 LINK C MSE A 238 N THR A 239 1555 1555 1.33 LINK C LYS A 306 N MSE A 307 1555 1555 1.33 LINK C MSE A 307 N GLU A 308 1555 1555 1.33 LINK C ILE A 312 N MSE A 313 1555 1555 1.33 LINK C MSE A 313 N ALA A 314 1555 1555 1.33 LINK C ARG A 343 N MSE A 344 1555 1555 1.32 LINK C MSE A 344 N AVAL A 345 1555 1555 1.33 LINK C MSE A 344 N BVAL A 345 1555 1555 1.33 LINK C ALA B 0 N MSE B 1 1555 1555 1.33 LINK C MSE B 1 N ILE B 2 1555 1555 1.33 LINK C THR B 106 N MSE B 107 1555 1555 1.33 LINK C MSE B 107 N ASP B 108 1555 1555 1.33 LINK C ASN B 177 N MSE B 178 1555 1555 1.33 LINK C MSE B 178 N CYS B 179 1555 1555 1.33 LINK C LEU B 186 N ALLP B 187 1555 1555 1.33 LINK C LEU B 186 N BLLP B 187 1555 1555 1.33 LINK C ALLP B 187 N HIS B 188 1555 1555 1.33 LINK C BLLP B 187 N HIS B 188 1555 1555 1.33 LINK C ALA B 208 N AMSE B 209 1555 1555 1.33 LINK C ALA B 208 N BMSE B 209 1555 1555 1.33 LINK C AMSE B 209 N LEU B 210 1555 1555 1.33 LINK C BMSE B 209 N LEU B 210 1555 1555 1.33 LINK C HIS B 237 N MSE B 238 1555 1555 1.33 LINK C MSE B 238 N THR B 239 1555 1555 1.33 LINK C LYS B 306 N MSE B 307 1555 1555 1.33 LINK C MSE B 307 N AGLU B 308 1555 1555 1.33 LINK C MSE B 307 N BGLU B 308 1555 1555 1.33 LINK C ILE B 312 N MSE B 313 1555 1555 1.33 LINK C MSE B 313 N ALA B 314 1555 1555 1.33 LINK C AARG B 343 N MSE B 344 1555 1555 1.33 LINK C BARG B 343 N MSE B 344 1555 1555 1.33 LINK C MSE B 344 N AVAL B 345 1555 1555 1.32 LINK C MSE B 344 N BVAL B 345 1555 1555 1.33 SITE 1 AC1 6 ALA A 154 VAL A 155 ASN A 177 MSE A 178 SITE 2 AC1 6 HOH A 681 HOH A 926 SITE 1 AC2 7 PRO A 275 ASP A 299 GLY A 368 TRP A 369 SITE 2 AC2 7 HOH A 509 HOH A 539 HOH A 570 SITE 1 AC3 6 VAL B 155 GLY B 176 ASN B 177 MSE B 178 SITE 2 AC3 6 HOH B 678 HOH B 693 SITE 1 AC4 8 PRO B 275 GLY B 368 TRP B 369 HOH B 531 SITE 2 AC4 8 HOH B 535 HOH B 621 HOH B 851 HOH B 861 CRYST1 204.137 73.025 58.607 90.00 103.68 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.004899 0.000000 0.001193 0.00000 SCALE2 0.000000 0.013694 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017561 0.00000