HEADER TRANSFERASE 20-MAY-15 4ZXG TITLE LIGANDIN BINDING SITE OF PFGST COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUTATHIONE S-TRANSFERASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 3-207; COMPND 5 SYNONYM: PFGST; COMPND 6 EC: 2.5.1.18; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLASMODIUM FALCIPARUM; SOURCE 3 ORGANISM_TAXID: 5833; SOURCE 4 GENE: GST; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS GST, PLASMODIUM FALCIPARUM, HEMIN, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR M.PERBANDT,R.EBERLE,C.BETZEL REVDAT 4 10-JAN-24 4ZXG 1 REMARK REVDAT 3 07-MAR-18 4ZXG 1 REMARK REVDAT 2 09-SEP-15 4ZXG 1 JRNL REVDAT 1 24-JUN-15 4ZXG 0 JRNL AUTH M.PERBANDT,R.EBERLE,L.FISCHER-RIEPE,H.CANG,E.LIEBAU,C.BETZEL JRNL TITL HIGH RESOLUTION STRUCTURES OF PLASMODIUM FALCIPARUM GST JRNL TITL 2 COMPLEXES PROVIDE NOVEL INSIGHTS INTO THE DIMER-TETRAMER JRNL TITL 3 TRANSITION AND A NOVEL LIGAND-BINDING SITE. JRNL REF J.STRUCT.BIOL. V. 191 365 2015 JRNL REFN ESSN 1095-8657 JRNL PMID 26072058 JRNL DOI 10.1016/J.JSB.2015.06.008 REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 273546 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING + TEST SET) : NULL REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.229 REMARK 3 FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 FREE R VALUE TEST SET COUNT : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3161 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 56 REMARK 3 SOLVENT ATOMS : 273 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 34.46 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): NULL REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): NULL REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 DISTANCE RESTRAINTS. RMS SIGMA REMARK 3 BOND LENGTH (A) : NULL ; NULL REMARK 3 ANGLE DISTANCE (A) : NULL ; NULL REMARK 3 INTRAPLANAR 1-4 DISTANCE (A) : NULL ; NULL REMARK 3 H-BOND OR METAL COORDINATION (A) : NULL ; NULL REMARK 3 REMARK 3 PLANE RESTRAINT (A) : NULL ; NULL REMARK 3 CHIRAL-CENTER RESTRAINT (A**3) : NULL ; NULL REMARK 3 REMARK 3 NON-BONDED CONTACT RESTRAINTS. REMARK 3 SINGLE TORSION (A) : NULL ; NULL REMARK 3 MULTIPLE TORSION (A) : NULL ; NULL REMARK 3 H-BOND (X...Y) (A) : NULL ; NULL REMARK 3 H-BOND (X-H...Y) (A) : NULL ; NULL REMARK 3 REMARK 3 CONFORMATIONAL TORSION ANGLE RESTRAINTS. REMARK 3 SPECIFIED (DEGREES) : NULL ; NULL REMARK 3 PLANAR (DEGREES) : NULL ; NULL REMARK 3 STAGGERED (DEGREES) : NULL ; NULL REMARK 3 TRANSVERSE (DEGREES) : NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZXG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000210043. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PETRA III, EMBL C/O DESY REMARK 200 BEAMLINE : P14 (MX2) REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.24 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 273546 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.02600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 30.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1PA3 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: AMMONIUM SULFATE, MES, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 43.20000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.45000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 43.20000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 30.45000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 36110 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -134.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 172.80000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 60.90000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 432 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 449 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 443 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 448 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 510 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 148 REMARK 465 ASP A 149 REMARK 465 SER A 178 REMARK 465 ASN B 38 REMARK 465 GLY B 39 REMARK 465 HIS B 143 REMARK 465 THR B 144 REMARK 465 ASN B 145 REMARK 465 ASN B 146 REMARK 465 ASN B 147 REMARK 465 ASN B 148 REMARK 465 PRO B 177 REMARK 465 SER B 178 REMARK 465 SER B 179 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 3 OD1 REMARK 470 ILE A 5 CD1 REMARK 470 VAL A 37 CG1 REMARK 470 LYS A 46 CD CE NZ REMARK 470 LYS A 50 CG CD CE NZ REMARK 470 GLU A 51 CG CD OE2 REMARK 470 LEU A 67 CD1 REMARK 470 LYS A 81 CD CE NZ REMARK 470 LYS A 82 CE NZ REMARK 470 GLU A 126 CD OE1 OE2 REMARK 470 LYS A 130 CE NZ REMARK 470 LYS A 137 CD REMARK 470 LYS A 140 CD CE NZ REMARK 470 LYS A 141 NZ REMARK 470 ASN A 142 CB REMARK 470 THR A 144 C CB OG1 CG2 REMARK 470 ASN A 147 CB REMARK 470 ASN A 156 OD1 ND2 REMARK 470 PRO A 177 CB CG CD REMARK 470 SER A 179 CB OG REMARK 470 LYS A 181 CB CG CD CE NZ REMARK 470 LYS A 200 CD CE NZ REMARK 470 ASN A 201 OD1 REMARK 470 ILE A 203 CD1 REMARK 470 ASN A 205 CG OD1 ND2 REMARK 470 LYS A 207 CA CB CG CD CE NZ REMARK 470 ASP B 3 CB CG OD1 REMARK 470 ASN B 4 CA CB CG OD1 ND2 REMARK 470 ARG B 13 NH1 NH2 REMARK 470 ILE B 28 CD1 REMARK 470 GLU B 29 CD OE1 OE2 REMARK 470 LYS B 33 CD CE NZ REMARK 470 VAL B 37 CG1 CG2 REMARK 470 ASP B 40 CG OD2 REMARK 470 VAL B 43 CG1 CG2 REMARK 470 LYS B 46 CD CE NZ REMARK 470 LYS B 50 CE NZ REMARK 470 GLU B 51 CG CD OE1 OE2 REMARK 470 LYS B 52 NZ REMARK 470 ASP B 66 OD2 REMARK 470 LYS B 81 CD CE NZ REMARK 470 LEU B 91 CG CD1 CD2 REMARK 470 GLU B 126 CG REMARK 470 LYS B 137 CD CE NZ REMARK 470 LYS B 140 CE NZ REMARK 470 LYS B 141 CD CE NZ REMARK 470 ASP B 149 C O CB CG OD1 OD2 REMARK 470 LYS B 150 N CA CB CG CD CE NZ REMARK 470 TYR B 151 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR B 151 OH REMARK 470 ASN B 156 OD1 ND2 REMARK 470 GLU B 173 OE2 REMARK 470 LYS B 181 CA CB CG CD CE NZ REMARK 470 ASN B 182 CG OD1 ND2 REMARK 470 ASN B 190 CB CG OD1 ND2 REMARK 470 LYS B 200 CG CD CE NZ REMARK 470 ASN B 205 OD1 REMARK 470 LYS B 207 CB CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 490 O HOH A 528 1.42 REMARK 500 O HOH A 504 O HOH A 528 1.69 REMARK 500 O HOH A 428 O HOH A 441 1.73 REMARK 500 O HOH A 466 O HOH A 531 2.05 REMARK 500 O HOH A 488 O HOH A 511 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O1 GOL B 302 O3 GOL B 302 2765 1.77 REMARK 500 O1 GOL B 302 O2 GOL B 302 2765 1.93 REMARK 500 O1 GOL B 302 C3 GOL B 302 2765 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LEU A 124 N LEU A 124 CA 0.157 REMARK 500 LEU A 124 N LEU A 124 CA 0.159 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 124 CA - C - N ANGL. DEV. = -13.6 DEGREES REMARK 500 LEU A 124 CA - C - N ANGL. DEV. = -14.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLN A 71 104.23 83.62 REMARK 500 GLN A 71 106.66 83.62 REMARK 500 GLN B 71 110.20 82.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 LEU A 124 14.27 REMARK 500 LEU A 124 14.57 REMARK 500 THR B 113 12.88 REMARK 500 THR B 113 12.34 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B 510 DISTANCE = 6.37 ANGSTROMS REMARK 525 HOH B 516 DISTANCE = 6.51 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue SO4 B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GOL B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue MES B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Ligand LYS B 181 bound to ASN A REMARK 800 148 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Ligand LYS B 181 bound to ASN A REMARK 800 148 REMARK 800 REMARK 800 SITE_IDENTIFIER: AD2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for Ligand LYS B 181 bound to ASN A REMARK 800 148 DBREF 4ZXG A 3 207 UNP Q8MU52 GST_PLAFA 3 207 DBREF 4ZXG B 3 207 UNP Q8MU52 GST_PLAFA 3 207 SEQRES 1 A 205 ASP ASN ILE VAL LEU TYR TYR PHE ASP ALA ARG GLY LYS SEQRES 2 A 205 ALA GLU LEU ILE ARG LEU ILE PHE ALA TYR LEU GLY ILE SEQRES 3 A 205 GLU TYR THR ASP LYS ARG PHE GLY VAL ASN GLY ASP ALA SEQRES 4 A 205 PHE VAL GLU PHE LYS ASN PHE LYS LYS GLU LYS ASP THR SEQRES 5 A 205 PRO PHE GLU GLN VAL PRO ILE LEU GLN ILE GLY ASP LEU SEQRES 6 A 205 ILE LEU ALA GLN SER GLN ALA ILE VAL ARG TYR LEU SER SEQRES 7 A 205 LYS LYS TYR ASN ILE CYS GLY GLU SER GLU LEU ASN GLU SEQRES 8 A 205 PHE TYR ALA ASP MET ILE PHE CYS GLY VAL GLN ASP ILE SEQRES 9 A 205 HIS TYR LYS PHE ASN ASN THR ASN LEU PHE LYS GLN ASN SEQRES 10 A 205 GLU THR THR PHE LEU ASN GLU ASP LEU PRO LYS TRP SER SEQRES 11 A 205 GLY TYR PHE GLU LYS LEU LEU LYS LYS ASN HIS THR ASN SEQRES 12 A 205 ASN ASN ASN ASP LYS TYR TYR PHE VAL GLY ASN ASN LEU SEQRES 13 A 205 THR TYR ALA ASP LEU ALA VAL PHE ASN LEU TYR ASP ASP SEQRES 14 A 205 ILE GLU THR LYS TYR PRO SER SER LEU LYS ASN PHE PRO SEQRES 15 A 205 LEU LEU LYS ALA HIS ASN GLU PHE ILE SER ASN LEU PRO SEQRES 16 A 205 ASN ILE LYS ASN TYR ILE THR ASN ARG LYS SEQRES 1 B 205 ASP ASN ILE VAL LEU TYR TYR PHE ASP ALA ARG GLY LYS SEQRES 2 B 205 ALA GLU LEU ILE ARG LEU ILE PHE ALA TYR LEU GLY ILE SEQRES 3 B 205 GLU TYR THR ASP LYS ARG PHE GLY VAL ASN GLY ASP ALA SEQRES 4 B 205 PHE VAL GLU PHE LYS ASN PHE LYS LYS GLU LYS ASP THR SEQRES 5 B 205 PRO PHE GLU GLN VAL PRO ILE LEU GLN ILE GLY ASP LEU SEQRES 6 B 205 ILE LEU ALA GLN SER GLN ALA ILE VAL ARG TYR LEU SER SEQRES 7 B 205 LYS LYS TYR ASN ILE CYS GLY GLU SER GLU LEU ASN GLU SEQRES 8 B 205 PHE TYR ALA ASP MET ILE PHE CYS GLY VAL GLN ASP ILE SEQRES 9 B 205 HIS TYR LYS PHE ASN ASN THR ASN LEU PHE LYS GLN ASN SEQRES 10 B 205 GLU THR THR PHE LEU ASN GLU ASP LEU PRO LYS TRP SER SEQRES 11 B 205 GLY TYR PHE GLU LYS LEU LEU LYS LYS ASN HIS THR ASN SEQRES 12 B 205 ASN ASN ASN ASP LYS TYR TYR PHE VAL GLY ASN ASN LEU SEQRES 13 B 205 THR TYR ALA ASP LEU ALA VAL PHE ASN LEU TYR ASP ASP SEQRES 14 B 205 ILE GLU THR LYS TYR PRO SER SER LEU LYS ASN PHE PRO SEQRES 15 B 205 LEU LEU LYS ALA HIS ASN GLU PHE ILE SER ASN LEU PRO SEQRES 16 B 205 ASN ILE LYS ASN TYR ILE THR ASN ARG LYS HET SO4 A 301 5 HET SO4 A 302 5 HET SO4 A 303 5 HET GOL A 304 6 HET MES A 305 12 HET SO4 B 301 5 HET GOL B 302 6 HET MES B 303 12 HETNAM SO4 SULFATE ION HETNAM GOL GLYCEROL HETNAM MES 2-(N-MORPHOLINO)-ETHANESULFONIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 SO4 4(O4 S 2-) FORMUL 6 GOL 2(C3 H8 O3) FORMUL 7 MES 2(C6 H13 N O4 S) FORMUL 11 HOH *273(H2 O) HELIX 1 AA1 ALA A 16 GLY A 27 1 12 HELIX 2 AA2 ASP A 40 LYS A 52 1 13 HELIX 3 AA3 GLN A 71 TYR A 83 1 13 HELIX 4 AA4 SER A 89 ASN A 112 1 24 HELIX 5 AA5 ASN A 119 ASP A 127 1 9 HELIX 6 AA6 ASP A 127 ASN A 142 1 16 HELIX 7 AA7 THR A 159 TYR A 176 1 18 HELIX 8 AA8 PHE A 183 ASN A 195 1 13 HELIX 9 AA9 LEU A 196 ARG A 206 1 11 HELIX 10 AB1 ALA B 16 GLY B 27 1 12 HELIX 11 AB2 ALA B 41 LYS B 52 1 12 HELIX 12 AB3 GLN B 71 TYR B 83 1 13 HELIX 13 AB4 SER B 89 ASN B 112 1 24 HELIX 14 AB5 ASN B 119 GLU B 126 1 8 HELIX 15 AB6 GLU B 126 ASN B 142 1 17 HELIX 16 AB7 THR B 159 TYR B 176 1 18 HELIX 17 AB8 PHE B 183 LEU B 196 1 14 HELIX 18 AB9 LEU B 196 ARG B 206 1 11 SHEET 1 AA1 4 THR A 31 PHE A 35 0 SHEET 2 AA1 4 ILE A 5 PHE A 10 1 N LEU A 7 O THR A 31 SHEET 3 AA1 4 ILE A 61 ILE A 64 -1 O GLN A 63 N VAL A 6 SHEET 4 AA1 4 LEU A 67 ALA A 70 -1 O LEU A 69 N LEU A 62 SHEET 1 AA2 4 THR B 31 PHE B 35 0 SHEET 2 AA2 4 VAL B 6 PHE B 10 1 N TYR B 9 O PHE B 35 SHEET 3 AA2 4 ILE B 61 ILE B 64 -1 O GLN B 63 N VAL B 6 SHEET 4 AA2 4 LEU B 67 ALA B 70 -1 O LEU B 67 N ILE B 64 CISPEP 1 VAL A 59 PRO A 60 0 9.28 CISPEP 2 VAL B 59 PRO B 60 0 7.93 SITE 1 AC1 2 TYR A 8 LYS A 52 SITE 1 AC2 1 MES A 305 SITE 1 AC3 3 TYR A 83 HOH A 406 ASN B 84 SITE 1 AC4 4 ASN A 84 GLU A 88 LYS B 82 TYR B 83 SITE 1 AC5 6 TYR A 25 LEU A 26 LEU A 196 PRO A 197 SITE 2 AC5 6 ASN A 198 SO4 A 302 SITE 1 AC6 7 LYS B 15 GLN B 71 SER B 72 GLN B 73 SITE 2 AC6 7 HOH B 405 HOH B 415 HOH B 432 SITE 1 AC7 3 TYR B 108 HOH B 408 HOH B 434 SITE 1 AC8 5 TYR B 25 LEU B 26 LEU B 196 PRO B 197 SITE 2 AC8 5 ASN B 198 SITE 1 AC9 4 ASN A 201 LEU B 180 ASN B 182 PHE B 183 SITE 1 AD1 4 ASN A 201 LEU B 180 ASN B 182 PHE B 183 SITE 1 AD2 4 ASN A 201 LEU B 180 ASN B 182 PHE B 183 CRYST1 86.400 60.900 74.800 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011574 0.000000 0.000000 0.00000 SCALE2 0.000000 0.016420 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013369 0.00000