HEADER TRANSFERASE/TRANSFERASE INHIBITOR 22-MAY-15 4ZZ2 TITLE HUMAN GAR TRANSFORMYLASE IN COMPLEX WITH GAR AND (S)-2-({5-[3-(2- TITLE 2 AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3-D]PYRIMIDIN-6-YL)-PROPYL]- TITLE 3 THIOPHENE-3-CARBONYL}-AMINO)-PENTANEDIOIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: GAR TRANSFORMYLASE DOMAIN; COMPND 5 EC: 6.3.4.13,6.3.3.1,2.1.2.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GART, PGFT, PRGS; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET22B KEYWDS GAR TRANSFORMYLASE, ANTIFOLATE, TRANSFERASE-TRANSFERASE INHIBITOR KEYWDS 2 COMPLEX, STRUCTURAL GENOMICS EXPDTA X-RAY DIFFRACTION AUTHOR S.M.DEIS,C.E.DANN III REVDAT 4 27-SEP-23 4ZZ2 1 REMARK REVDAT 3 04-DEC-19 4ZZ2 1 REMARK REVDAT 2 20-SEP-17 4ZZ2 1 JRNL REMARK REVDAT 1 16-DEC-15 4ZZ2 0 JRNL AUTH L.WANG,A.WALLACE,S.RAGHAVAN,S.M.DEIS,M.R.WILSON,S.YANG, JRNL AUTH 2 L.POLIN,K.WHITE,J.KUSHNER,S.ORR,C.GEORGE,C.O'CONNOR,Z.HOU, JRNL AUTH 3 S.MITCHELL-RYAN,C.E.DANN,L.H.MATHERLY,A.GANGJEE JRNL TITL 6-SUBSTITUTED PYRROLO[2,3-D]PYRIMIDINE THIENOYL REGIOISOMERS JRNL TITL 2 AS TARGETED ANTIFOLATES FOR FOLATE RECEPTOR ALPHA AND THE JRNL TITL 3 PROTON-COUPLED FOLATE TRANSPORTER IN HUMAN TUMORS. JRNL REF J.MED.CHEM. V. 58 6938 2015 JRNL REFN ISSN 0022-2623 JRNL PMID 26317331 JRNL DOI 10.1021/ACS.JMEDCHEM.5B00801 REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX PHENIX.REFINE 1.9 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 3 NUMBER OF REFLECTIONS : 57888 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.142 REMARK 3 R VALUE (WORKING SET) : 0.142 REMARK 3 FREE R VALUE : 0.162 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.460 REMARK 3 FREE R VALUE TEST SET COUNT : 2005 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.9963 - 3.4963 0.97 4212 154 0.1278 0.1569 REMARK 3 2 3.4963 - 2.7753 1.00 4179 153 0.1448 0.1644 REMARK 3 3 2.7753 - 2.4246 1.00 4116 143 0.1491 0.1795 REMARK 3 4 2.4246 - 2.2029 1.00 4117 148 0.1388 0.1491 REMARK 3 5 2.2029 - 2.0450 1.00 4084 145 0.1374 0.1667 REMARK 3 6 2.0450 - 1.9245 1.00 4101 149 0.1419 0.1811 REMARK 3 7 1.9245 - 1.8281 1.00 4096 145 0.1411 0.1433 REMARK 3 8 1.8281 - 1.7485 1.00 4059 148 0.1389 0.1444 REMARK 3 9 1.7485 - 1.6812 1.00 4049 143 0.1417 0.1495 REMARK 3 10 1.6812 - 1.6232 1.00 4070 150 0.1381 0.1457 REMARK 3 11 1.6232 - 1.5724 1.00 4065 146 0.1411 0.1609 REMARK 3 12 1.5724 - 1.5275 1.00 4087 143 0.1605 0.1815 REMARK 3 13 1.5275 - 1.4873 0.98 3958 142 0.1793 0.1866 REMARK 3 14 1.4873 - 1.4510 0.66 2690 96 0.2002 0.2026 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.100 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 14.180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 13.69 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 22.92 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 1664 REMARK 3 ANGLE : 1.144 2275 REMARK 3 CHIRALITY : 0.046 266 REMARK 3 PLANARITY : 0.006 297 REMARK 3 DIHEDRAL : 13.759 618 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 808 THROUGH 818 ) REMARK 3 ORIGIN FOR THE GROUP (A): 36.3529 17.2201 25.9102 REMARK 3 T TENSOR REMARK 3 T11: 0.1600 T22: 0.1263 REMARK 3 T33: 0.1355 T12: -0.0473 REMARK 3 T13: -0.0183 T23: 0.0180 REMARK 3 L TENSOR REMARK 3 L11: 1.7651 L22: 1.3801 REMARK 3 L33: 5.3080 L12: -0.2786 REMARK 3 L13: 0.9044 L23: -0.2355 REMARK 3 S TENSOR REMARK 3 S11: 0.1250 S12: -0.2686 S13: -0.1451 REMARK 3 S21: 0.1608 S22: -0.0331 S23: 0.1007 REMARK 3 S31: 0.4028 S32: -0.2516 S33: -0.0871 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 819 THROUGH 835 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.6018 28.2796 23.9200 REMARK 3 T TENSOR REMARK 3 T11: 0.1090 T22: 0.1494 REMARK 3 T33: 0.1181 T12: -0.0101 REMARK 3 T13: -0.0190 T23: -0.0162 REMARK 3 L TENSOR REMARK 3 L11: 1.5430 L22: 3.3759 REMARK 3 L33: 8.5474 L12: -1.8958 REMARK 3 L13: 2.8286 L23: -5.0542 REMARK 3 S TENSOR REMARK 3 S11: -0.0880 S12: -0.2831 S13: 0.0325 REMARK 3 S21: 0.1526 S22: 0.1209 S23: 0.0925 REMARK 3 S31: -0.2910 S32: -0.5163 S33: -0.0323 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 836 THROUGH 855 ) REMARK 3 ORIGIN FOR THE GROUP (A): 31.0557 15.7991 29.9077 REMARK 3 T TENSOR REMARK 3 T11: 0.1675 T22: 0.2252 REMARK 3 T33: 0.1967 T12: -0.1183 REMARK 3 T13: 0.0065 T23: 0.0126 REMARK 3 L TENSOR REMARK 3 L11: 2.4277 L22: 4.6350 REMARK 3 L33: 7.6671 L12: -0.0308 REMARK 3 L13: 0.0926 L23: -2.9562 REMARK 3 S TENSOR REMARK 3 S11: 0.2004 S12: -0.4245 S13: -0.1655 REMARK 3 S21: 0.3533 S22: -0.1008 S23: 0.4529 REMARK 3 S31: 0.2501 S32: -0.4830 S33: -0.0876 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 856 THROUGH 870 ) REMARK 3 ORIGIN FOR THE GROUP (A): 34.1781 6.1800 28.4124 REMARK 3 T TENSOR REMARK 3 T11: 0.3807 T22: 0.2158 REMARK 3 T33: 0.2999 T12: -0.1225 REMARK 3 T13: -0.0517 T23: 0.0563 REMARK 3 L TENSOR REMARK 3 L11: 4.1393 L22: 5.4299 REMARK 3 L33: 1.9372 L12: -3.0420 REMARK 3 L13: 0.3328 L23: -0.6242 REMARK 3 S TENSOR REMARK 3 S11: -0.0022 S12: -0.1814 S13: -0.4515 REMARK 3 S21: 0.5272 S22: -0.0746 S23: 0.2559 REMARK 3 S31: 0.6110 S32: -0.1845 S33: 0.0248 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 871 THROUGH 884 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.3720 4.5342 21.1035 REMARK 3 T TENSOR REMARK 3 T11: 0.3483 T22: 0.1134 REMARK 3 T33: 0.2912 T12: -0.0372 REMARK 3 T13: -0.0861 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 4.4957 L22: 5.4774 REMARK 3 L33: 3.0591 L12: -1.1641 REMARK 3 L13: 1.9328 L23: -0.2959 REMARK 3 S TENSOR REMARK 3 S11: 0.2171 S12: 0.0695 S13: -0.4938 REMARK 3 S21: 0.0755 S22: -0.0405 S23: 0.0628 REMARK 3 S31: 0.4365 S32: 0.1003 S33: -0.1167 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 885 THROUGH 906 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.0175 11.8898 21.9286 REMARK 3 T TENSOR REMARK 3 T11: 0.2257 T22: 0.0903 REMARK 3 T33: 0.1728 T12: -0.0058 REMARK 3 T13: -0.0633 T23: -0.0110 REMARK 3 L TENSOR REMARK 3 L11: 1.5798 L22: 2.2615 REMARK 3 L33: 2.3917 L12: -0.7972 REMARK 3 L13: 0.6427 L23: -0.1167 REMARK 3 S TENSOR REMARK 3 S11: 0.2228 S12: 0.0040 S13: -0.3591 REMARK 3 S21: 0.0039 S22: 0.0118 S23: -0.0106 REMARK 3 S31: 0.4874 S32: 0.0620 S33: -0.1844 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 907 THROUGH 954 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.9422 20.0373 30.5440 REMARK 3 T TENSOR REMARK 3 T11: 0.1007 T22: 0.0615 REMARK 3 T33: 0.0998 T12: 0.0069 REMARK 3 T13: -0.0057 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 1.6327 L22: 1.1985 REMARK 3 L33: 3.4284 L12: 0.4890 REMARK 3 L13: 1.5635 L23: 1.2068 REMARK 3 S TENSOR REMARK 3 S11: 0.1330 S12: 0.0548 S13: -0.2009 REMARK 3 S21: 0.0053 S22: -0.0148 S23: -0.0433 REMARK 3 S31: 0.2718 S32: 0.1182 S33: -0.1041 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 955 THROUGH 968 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.2302 30.7713 38.7799 REMARK 3 T TENSOR REMARK 3 T11: 0.0665 T22: 0.0710 REMARK 3 T33: 0.0743 T12: -0.0173 REMARK 3 T13: -0.0063 T23: 0.0018 REMARK 3 L TENSOR REMARK 3 L11: 1.4627 L22: 1.5060 REMARK 3 L33: 2.0322 L12: 0.2075 REMARK 3 L13: 0.9512 L23: 0.4467 REMARK 3 S TENSOR REMARK 3 S11: 0.0292 S12: -0.1073 S13: 0.0159 REMARK 3 S21: 0.1038 S22: -0.0837 S23: 0.0326 REMARK 3 S31: -0.1938 S32: -0.0648 S33: 0.0717 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 969 THROUGH 992 ) REMARK 3 ORIGIN FOR THE GROUP (A): 43.8240 28.2318 31.9549 REMARK 3 T TENSOR REMARK 3 T11: 0.0894 T22: 0.0745 REMARK 3 T33: 0.1023 T12: -0.0109 REMARK 3 T13: -0.0039 T23: 0.0055 REMARK 3 L TENSOR REMARK 3 L11: 0.9534 L22: 0.1578 REMARK 3 L33: 8.5321 L12: -0.0040 REMARK 3 L13: 2.0019 L23: 0.5594 REMARK 3 S TENSOR REMARK 3 S11: 0.0185 S12: -0.0092 S13: -0.0519 REMARK 3 S21: -0.0113 S22: 0.0181 S23: 0.0753 REMARK 3 S31: -0.0383 S32: -0.1407 S33: -0.0371 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 993 THROUGH 1007 ) REMARK 3 ORIGIN FOR THE GROUP (A): 52.3608 25.5297 12.8013 REMARK 3 T TENSOR REMARK 3 T11: 0.2097 T22: 0.3822 REMARK 3 T33: 0.2154 T12: 0.0491 REMARK 3 T13: 0.0307 T23: 0.0182 REMARK 3 L TENSOR REMARK 3 L11: 8.0454 L22: 7.5973 REMARK 3 L33: 4.5853 L12: -2.0516 REMARK 3 L13: -1.6575 L23: 1.4738 REMARK 3 S TENSOR REMARK 3 S11: 0.0704 S12: 0.8485 S13: -0.1177 REMARK 3 S21: -0.3891 S22: -0.2113 S23: -0.7846 REMARK 3 S31: 0.2625 S32: 0.9989 S33: 0.1027 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZZ2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000210130. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 24-AUG-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 4.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0001 REMARK 200 MONOCHROMATOR : ROSENBAUM-ROCK SI(111) SAGITALLY REMARK 200 FOCUSED MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CMOS REMARK 200 DETECTOR MANUFACTURER : RDI CMOS_8M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 59354 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 10.30 REMARK 200 R MERGE (I) : 0.06600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 18.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.8 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.52100 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.5.6 REMARK 200 STARTING MODEL: 4X7A REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.90 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 18 % PEG4000, 2 % PEG400, 0.33 M NACL, REMARK 280 PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 67.33000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.66500 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 33.66500 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 67.33000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A1482 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 807 REMARK 465 LYS A 1008 REMARK 465 GLU A 1009 REMARK 465 GLU A 1010 REMARK 465 HIS A 1011 REMARK 465 HIS A 1012 REMARK 465 HIS A 1013 REMARK 465 HIS A 1014 REMARK 465 HIS A 1015 REMARK 465 HIS A 1016 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 869 CG CD CE NZ REMARK 470 GLU A1000 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1209 O HOH A 1266 2.15 REMARK 500 NH1 ARG A 829 O ALA A 856 2.17 REMARK 500 O HOH A 1320 O HOH A 1345 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1266 O HOH A 1266 5555 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 939 -152.36 -123.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A1495 DISTANCE = 6.09 ANGSTROMS REMARK 525 HOH A1496 DISTANCE = 6.38 ANGSTROMS REMARK 525 HOH A1497 DISTANCE = 6.40 ANGSTROMS REMARK 525 HOH A1498 DISTANCE = 6.61 ANGSTROMS REMARK 525 HOH A1499 DISTANCE = 6.64 ANGSTROMS REMARK 525 HOH A1500 DISTANCE = 6.77 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue GAR A 1101 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 3YG A 1102 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4EW2 RELATED DB: PDB REMARK 900 4EW2 IS THE SAME PROTEIN COMPLEXED WITH 10S-METHYLTHIO-DDATHF REMARK 900 RELATED ID: 4EW3 RELATED DB: PDB REMARK 900 4EW3 IS THE SAME PROTEIN COMPLEXED WITH 10R-METHYLTHIO-DDATHF REMARK 900 RELATED ID: 1RBM RELATED DB: PDB REMARK 900 1RBM IS THE SAME PROTEIN COMPLEXED WITH POLYGLUTAMINATED 10- REMARK 900 (TRIFLUOROACETYL)-5,10-DIDEAZAACYCLIC-5,6,7,8-TETRAHYDROFOLIC ACID REMARK 900 RELATED ID: 1RBQ RELATED DB: PDB REMARK 900 1RBQ IS THE SAME PROTEIN COMPLEXED WITH 10-(TRIFLUOROACETYL)-5,10- REMARK 900 DIDEAZAACYCLIC-5,6,7,8-TETRAHYDROFOLIC ACID REMARK 900 RELATED ID: 1RBY RELATED DB: PDB REMARK 900 1RBY IS THE SAME PROTEIN COMPLEXED WITH 10-(TRIFLUOROACETYL)-5,10- REMARK 900 DIDEAZAACYCLIC-5,6,7,8-TETRAHYDROFOLIC ACID AND BETA-GAR REMARK 900 RELATED ID: 1RBZ RELATED DB: PDB REMARK 900 1RBZ IS THE SAME PROTEIN COMPLEXED WITH POLYGLUTAMINATED 10- REMARK 900 (TRIFLUOROACETYL)-5,10-DIDEAZAACYCLIC-5,6,7,8-TETRAHYDROFOLIC ACID REMARK 900 RELATED ID: 1RC0 RELATED DB: PDB REMARK 900 1RC0 IS THE SAME PROTEIN COMPLEXED WITH POLYGLUTAMINATED 10- REMARK 900 (TRIFLUOROACETYL)-5,10-DIDEAZAACYCLIC-5,6,7,8-TETRAHYDROFOLIC ACID REMARK 900 RELATED ID: 1RC1 RELATED DB: PDB REMARK 900 1RC1 IS THE SAME PROTEIN COMPLEXED WITH POLYGLUTAMINATED 10- REMARK 900 (TRIFLUOROACETYL)-5,10-DIDEAZAACYCLIC-5,6,7,8-TETRAHYDROFOLIC ACID REMARK 900 RELATED ID: 1NJS RELATED DB: PDB REMARK 900 1NJS IS THE SAME PROTEIN COMPLEXED WITH A HYDROLYZED FORM OF 10- REMARK 900 (TRIFLUOROACETYL)-5,10-DIDEAZAACYCLIC-5,6,7,8-TETRAHYDROFOLIC ACID REMARK 900 RELATED ID: 1MEN RELATED DB: PDB REMARK 900 1MEN IS THE SAME PROTEIN COMPLEXED WITH BETA-GAR REMARK 900 RELATED ID: 1MEJ RELATED DB: PDB REMARK 900 1MEJ IS THE SAME PROTEIN IN APO FORM AT PH 8.5 REMARK 900 RELATED ID: 1MEO RELATED DB: PDB REMARK 900 1MEO IS THE SAME PROTEIN IN APO FORM AT PH 4.2 REMARK 900 RELATED ID: 1ZLX RELATED DB: PDB REMARK 900 1ZLX IS THE SAME PROTEIN IN APO FORM REMARK 900 RELATED ID: 1ZLY RELATED DB: PDB REMARK 900 1ZLY IS THE SAME PROTEIN COMPLEXED WITH 4-[(4-{[(2-AMINO-4-OXO-3,4- REMARK 900 DIHYDROQUINAZOLIN- 6-YL)METHYL]AMINO}BENZOYL)AMINO]BUTANOIC ACID REMARK 900 AND 5-O-PHOSPHONO-BETA-D-RIBOFURANOSYLAMINE REMARK 900 RELATED ID: 4ZYT RELATED DB: PDB REMARK 900 RELATED ID: 4ZYU RELATED DB: PDB REMARK 900 RELATED ID: 4ZYV RELATED DB: PDB REMARK 900 RELATED ID: 4ZYW RELATED DB: PDB REMARK 900 RELATED ID: 4ZYX RELATED DB: PDB REMARK 900 RELATED ID: 4ZZ1 RELATED DB: PDB REMARK 900 RELATED ID: 4ZYY RELATED DB: PDB REMARK 900 RELATED ID: 4ZYZ RELATED DB: PDB REMARK 900 RELATED ID: 4ZZ0 RELATED DB: PDB REMARK 900 RELATED ID: 4ZZ3 RELATED DB: PDB DBREF 4ZZ2 A 808 1010 UNP P22102 PUR2_HUMAN 808 1010 SEQADV 4ZZ2 MET A 807 UNP P22102 INITIATING METHIONINE SEQADV 4ZZ2 HIS A 1011 UNP P22102 EXPRESSION TAG SEQADV 4ZZ2 HIS A 1012 UNP P22102 EXPRESSION TAG SEQADV 4ZZ2 HIS A 1013 UNP P22102 EXPRESSION TAG SEQADV 4ZZ2 HIS A 1014 UNP P22102 EXPRESSION TAG SEQADV 4ZZ2 HIS A 1015 UNP P22102 EXPRESSION TAG SEQADV 4ZZ2 HIS A 1016 UNP P22102 EXPRESSION TAG SEQRES 1 A 210 MET ALA ARG VAL ALA VAL LEU ILE SER GLY THR GLY SER SEQRES 2 A 210 ASN LEU GLN ALA LEU ILE ASP SER THR ARG GLU PRO ASN SEQRES 3 A 210 SER SER ALA GLN ILE ASP ILE VAL ILE SER ASN LYS ALA SEQRES 4 A 210 ALA VAL ALA GLY LEU ASP LYS ALA GLU ARG ALA GLY ILE SEQRES 5 A 210 PRO THR ARG VAL ILE ASN HIS LYS LEU TYR LYS ASN ARG SEQRES 6 A 210 VAL GLU PHE ASP SER ALA ILE ASP LEU VAL LEU GLU GLU SEQRES 7 A 210 PHE SER ILE ASP ILE VAL CYS LEU ALA GLY PHE MET ARG SEQRES 8 A 210 ILE LEU SER GLY PRO PHE VAL GLN LYS TRP ASN GLY LYS SEQRES 9 A 210 MET LEU ASN ILE HIS PRO SER LEU LEU PRO SER PHE LYS SEQRES 10 A 210 GLY SER ASN ALA HIS GLU GLN ALA LEU GLU THR GLY VAL SEQRES 11 A 210 THR VAL THR GLY CYS THR VAL HIS PHE VAL ALA GLU ASP SEQRES 12 A 210 VAL ASP ALA GLY GLN ILE ILE LEU GLN GLU ALA VAL PRO SEQRES 13 A 210 VAL LYS ARG GLY ASP THR VAL ALA THR LEU SER GLU ARG SEQRES 14 A 210 VAL LYS LEU ALA GLU HIS LYS ILE PHE PRO ALA ALA LEU SEQRES 15 A 210 GLN LEU VAL ALA SER GLY THR VAL GLN LEU GLY GLU ASN SEQRES 16 A 210 GLY LYS ILE CYS TRP VAL LYS GLU GLU HIS HIS HIS HIS SEQRES 17 A 210 HIS HIS HET GAR A1101 18 HET 3YG A1102 31 HETNAM GAR GLYCINAMIDE RIBONUCLEOTIDE HETNAM 3YG (S)-2-({5-[3-(2-AMINO-4-OXO-4,7-DIHYDRO-3H-PYRROLO[2,3- HETNAM 2 3YG D]PYRIMIDIN-6-YL)-PROPYL]-THIOPHENE-3-CARBONYL}- HETNAM 3 3YG AMINO)-PENTANEDIOIC ACID FORMUL 2 GAR C7 H13 N2 O8 P 2- FORMUL 3 3YG C19 H21 N5 O6 S FORMUL 4 HOH *300(H2 O) HELIX 1 AA1 GLY A 818 ARG A 829 1 12 HELIX 2 AA2 VAL A 847 ALA A 856 1 10 HELIX 3 AA3 ASN A 864 TYR A 868 5 5 HELIX 4 AA4 ASN A 870 PHE A 885 1 16 HELIX 5 AA5 SER A 900 TRP A 907 1 8 HELIX 6 AA6 ASN A 926 GLY A 935 1 10 HELIX 7 AA7 THR A 968 SER A 993 1 26 SHEET 1 AA1 7 THR A 860 VAL A 862 0 SHEET 2 AA1 7 GLN A 836 SER A 842 1 N VAL A 840 O ARG A 861 SHEET 3 AA1 7 ARG A 809 ILE A 814 1 N VAL A 810 O GLN A 836 SHEET 4 AA1 7 ILE A 889 LEU A 892 1 O CYS A 891 N LEU A 813 SHEET 5 AA1 7 MET A 911 HIS A 915 1 O LEU A 912 N LEU A 892 SHEET 6 AA1 7 VAL A 938 PHE A 945 -1 O THR A 942 N HIS A 915 SHEET 7 AA1 7 ILE A 955 PRO A 962 -1 O VAL A 961 N THR A 939 SHEET 1 AA2 2 VAL A 996 LEU A 998 0 SHEET 2 AA2 2 ILE A1004 TRP A1006 -1 O CYS A1005 N GLN A 997 CISPEP 1 LEU A 919 PRO A 920 0 13.55 SITE 1 AC1 19 THR A 817 GLY A 818 SER A 819 ASN A 820 SITE 2 AC1 19 GLY A 894 MET A 896 ILE A 914 PRO A 916 SITE 3 AC1 19 LYS A 977 GLU A 980 3YG A1102 HOH A1223 SITE 4 AC1 19 HOH A1234 HOH A1241 HOH A1251 HOH A1263 SITE 5 AC1 19 HOH A1298 HOH A1317 HOH A1341 SITE 1 AC2 20 ARG A 871 PHE A 895 MET A 896 ARG A 897 SITE 2 AC2 20 ILE A 898 LEU A 899 VAL A 904 GLY A 924 SITE 3 AC2 20 SER A 925 HIS A 944 VAL A 946 ALA A 947 SITE 4 AC2 20 GLU A 948 VAL A 950 ASP A 951 GAR A1101 SITE 5 AC2 20 HOH A1213 HOH A1224 HOH A1336 HOH A1397 CRYST1 75.577 75.577 100.995 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013232 0.007639 0.000000 0.00000 SCALE2 0.000000 0.015278 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009901 0.00000