HEADER HYDROLASE/HYDROLASE INHIBITOR 22-MAY-15 4ZZI TITLE SIRT1/ACTIVATOR/INHIBITOR COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: NAD-DEPENDENT PROTEIN DEACETYLASE SIRTUIN-1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HSIRT1,REGULATORY PROTEIN SIR2 HOMOLOG 1,SIR2-LIKE PROTEIN COMPND 5 1,HSIR2; COMPND 6 EC: 3.5.1.-; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SIRT1, SIR2L1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS SIRTUIN, ACTIVATOR, DEACYLASE, COMPLEX, HYDROLASE-HYDROLASE INHIBITOR KEYWDS 2 COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR H.DAI REVDAT 3 27-SEP-23 4ZZI 1 REMARK REVDAT 2 23-SEP-15 4ZZI 1 REMARK REVDAT 1 15-JUL-15 4ZZI 0 JRNL AUTH H.DAI,A.W.CASE,T.V.RIERA,T.CONSIDINE,J.E.LEE,Y.HAMURO, JRNL AUTH 2 H.ZHAO,Y.JIANG,S.M.SWEITZER,B.PIETRAK,B.SCHWARTZ,C.A.BLUM, JRNL AUTH 3 J.S.DISCH,R.CALDWELL,B.SZCZEPANKIEWICZ,C.OALMANN,P.YEE NG, JRNL AUTH 4 B.H.WHITE,R.CASAUBON,R.NARAYAN,K.KOPPETSCH,F.BOURBONAIS, JRNL AUTH 5 B.WU,J.WANG,D.QIAN,F.JIANG,C.MAO,M.WANG,E.HU,J.C.WU, JRNL AUTH 6 R.B.PERNI,G.P.VLASUK,J.L.ELLIS JRNL TITL CRYSTALLOGRAPHIC STRUCTURE OF A SMALL MOLECULE SIRT1 JRNL TITL 2 ACTIVATOR-ENZYME COMPLEX. JRNL REF NAT COMMUN V. 6 7645 2015 JRNL REFN ESSN 2041-1723 JRNL PMID 26134520 JRNL DOI 10.1038/NCOMMS8645 REMARK 2 REMARK 2 RESOLUTION. 2.73 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.9_1692 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.73 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.98 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 12698 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.193 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 636 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.9872 - 4.6742 1.00 2557 136 0.1905 0.2224 REMARK 3 2 4.6742 - 3.7109 1.00 2417 126 0.1714 0.2096 REMARK 3 3 3.7109 - 3.2420 1.00 2377 126 0.1985 0.2653 REMARK 3 4 3.2420 - 2.9457 1.00 2367 125 0.2160 0.2840 REMARK 3 5 2.9457 - 2.7346 1.00 2344 123 0.2365 0.3003 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.810 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 2814 REMARK 3 ANGLE : 0.898 3826 REMARK 3 CHIRALITY : 0.031 417 REMARK 3 PLANARITY : 0.007 495 REMARK 3 DIHEDRAL : 14.895 1089 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 183 THROUGH 216 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.0728 49.1881 -19.4313 REMARK 3 T TENSOR REMARK 3 T11: 0.8787 T22: 0.6228 REMARK 3 T33: 0.6039 T12: 0.2202 REMARK 3 T13: -0.1717 T23: -0.0457 REMARK 3 L TENSOR REMARK 3 L11: 8.8747 L22: 3.1028 REMARK 3 L33: 10.5411 L12: 3.1191 REMARK 3 L13: 1.8653 L23: 3.0482 REMARK 3 S TENSOR REMARK 3 S11: -0.1550 S12: -0.7198 S13: -0.4132 REMARK 3 S21: 0.7188 S22: 0.2378 S23: -1.0511 REMARK 3 S31: -0.1866 S32: 0.4848 S33: -0.4015 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 217 THROUGH 252 ) REMARK 3 ORIGIN FOR THE GROUP (A): 1.3571 58.2399 -5.5357 REMARK 3 T TENSOR REMARK 3 T11: 0.5437 T22: 0.4987 REMARK 3 T33: 0.7014 T12: -0.0113 REMARK 3 T13: -0.0099 T23: -0.1083 REMARK 3 L TENSOR REMARK 3 L11: 3.0485 L22: 2.5080 REMARK 3 L33: 3.2478 L12: -0.4017 REMARK 3 L13: 0.8352 L23: 0.0040 REMARK 3 S TENSOR REMARK 3 S11: -0.0668 S12: 0.1558 S13: 0.2536 REMARK 3 S21: 0.3429 S22: 0.1326 S23: 0.4307 REMARK 3 S31: -0.0805 S32: -0.3478 S33: 0.0150 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 253 THROUGH 298 ) REMARK 3 ORIGIN FOR THE GROUP (A): 12.7096 36.9425 -3.7339 REMARK 3 T TENSOR REMARK 3 T11: 0.5665 T22: 0.4412 REMARK 3 T33: 0.6746 T12: 0.0259 REMARK 3 T13: 0.1389 T23: -0.0206 REMARK 3 L TENSOR REMARK 3 L11: 9.0527 L22: 6.6949 REMARK 3 L33: 8.4122 L12: -2.9168 REMARK 3 L13: -2.5078 L23: 3.8122 REMARK 3 S TENSOR REMARK 3 S11: -0.1317 S12: 0.6869 S13: -0.4652 REMARK 3 S21: 0.1927 S22: 0.2032 S23: -0.8434 REMARK 3 S31: 0.7994 S32: 0.4894 S33: -0.0392 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 299 THROUGH 361 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.1568 33.5017 4.5676 REMARK 3 T TENSOR REMARK 3 T11: 0.8648 T22: 0.5077 REMARK 3 T33: 0.6994 T12: -0.0385 REMARK 3 T13: 0.1884 T23: 0.0842 REMARK 3 L TENSOR REMARK 3 L11: 6.8198 L22: 4.0818 REMARK 3 L33: 5.5813 L12: -0.5825 REMARK 3 L13: -0.3461 L23: 1.6573 REMARK 3 S TENSOR REMARK 3 S11: -0.3298 S12: -0.1245 S13: -1.5153 REMARK 3 S21: 0.7421 S22: -0.1240 S23: -0.0350 REMARK 3 S31: 1.1127 S32: -0.1042 S33: 0.3748 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 362 THROUGH 388 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.8245 20.7044 2.2094 REMARK 3 T TENSOR REMARK 3 T11: 1.5269 T22: 0.7868 REMARK 3 T33: 1.5736 T12: -0.2740 REMARK 3 T13: 0.5078 T23: -0.0866 REMARK 3 L TENSOR REMARK 3 L11: 3.4337 L22: 8.0646 REMARK 3 L33: 3.1880 L12: 1.8960 REMARK 3 L13: 1.2323 L23: 3.8153 REMARK 3 S TENSOR REMARK 3 S11: -0.1380 S12: -0.1013 S13: -2.1591 REMARK 3 S21: 1.6180 S22: 0.1799 S23: 0.6740 REMARK 3 S31: 2.2749 S32: -0.4015 S33: -0.0100 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 389 THROUGH 409 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.1939 12.1608 -3.6699 REMARK 3 T TENSOR REMARK 3 T11: 2.1089 T22: 0.7535 REMARK 3 T33: 1.9872 T12: -0.2588 REMARK 3 T13: 0.1488 T23: -0.3113 REMARK 3 L TENSOR REMARK 3 L11: 2.2850 L22: 7.1453 REMARK 3 L33: 2.7463 L12: -0.0691 REMARK 3 L13: -1.6448 L23: -3.1638 REMARK 3 S TENSOR REMARK 3 S11: 0.4331 S12: 0.7529 S13: -2.0594 REMARK 3 S21: 0.9348 S22: -0.0386 S23: -0.8253 REMARK 3 S31: 2.5293 S32: -0.1825 S33: -0.2758 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 410 THROUGH 447 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.3268 39.8283 -2.2725 REMARK 3 T TENSOR REMARK 3 T11: 0.5735 T22: 0.9383 REMARK 3 T33: 0.6054 T12: -0.0520 REMARK 3 T13: 0.1883 T23: -0.0604 REMARK 3 L TENSOR REMARK 3 L11: 5.4521 L22: 5.8129 REMARK 3 L33: 2.9907 L12: 0.4219 REMARK 3 L13: -1.7509 L23: 1.9153 REMARK 3 S TENSOR REMARK 3 S11: -0.1620 S12: 0.8865 S13: -0.6832 REMARK 3 S21: 0.4137 S22: -0.2679 S23: 0.6587 REMARK 3 S31: 0.3768 S32: -1.3001 S33: 0.3461 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 448 THROUGH 493 ) REMARK 3 ORIGIN FOR THE GROUP (A): 3.6681 53.6507 3.1571 REMARK 3 T TENSOR REMARK 3 T11: 0.4618 T22: 0.4506 REMARK 3 T33: 0.3466 T12: 0.0601 REMARK 3 T13: 0.0739 T23: -0.0783 REMARK 3 L TENSOR REMARK 3 L11: 8.1915 L22: 6.1123 REMARK 3 L33: 6.8906 L12: 2.2424 REMARK 3 L13: 1.9658 L23: 1.3558 REMARK 3 S TENSOR REMARK 3 S11: -0.1277 S12: -0.0190 S13: 0.4112 REMARK 3 S21: 0.3861 S22: -0.0074 S23: 0.1113 REMARK 3 S31: -0.0711 S32: -0.0511 S33: 0.1368 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 494 THROUGH 655 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.5005 57.6185 11.1329 REMARK 3 T TENSOR REMARK 3 T11: 1.0681 T22: 0.5791 REMARK 3 T33: 0.5164 T12: -0.0274 REMARK 3 T13: -0.0074 T23: -0.1330 REMARK 3 L TENSOR REMARK 3 L11: 3.4574 L22: 5.5221 REMARK 3 L33: 8.5197 L12: 1.3706 REMARK 3 L13: -1.4745 L23: -5.2726 REMARK 3 S TENSOR REMARK 3 S11: -0.4743 S12: -0.7685 S13: -0.0446 REMARK 3 S21: 1.7298 S22: -0.0702 S23: -0.2713 REMARK 3 S31: -0.1360 S32: -0.2627 S33: 0.5995 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4ZZI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 22-MAY-15. REMARK 100 THE DEPOSITION ID IS D_1000210081. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-FEB-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 21-ID-D REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.12713 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : XIA2 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12735 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.730 REMARK 200 RESOLUTION RANGE LOW (A) : 39.983 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 17.60 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 38.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.73 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 18.20 REMARK 200 R MERGE FOR SHELL (I) : 0.80300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3GLU AND 4IG9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.55 M SODIUM CHLORIDE, 0.1 M MES PH REMARK 280 6.5, AND 20 % W/V PEG 4000, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.97333 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 69.94667 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 52.46000 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 87.43333 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 17.48667 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 34.97333 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 69.94667 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 87.43333 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 52.46000 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 17.48667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2020 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 31730 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 61.07500 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 105.78500 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -17.48667 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 825 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 630 REMARK 465 PRO A 631 REMARK 465 VAL A 632 REMARK 465 GLY A 633 REMARK 465 GLY A 634 REMARK 465 GLY A 635 REMARK 465 SER A 636 REMARK 465 GLY A 637 REMARK 465 GLY A 638 REMARK 465 GLY A 639 REMARK 465 SER A 640 REMARK 465 GLU A 656 REMARK 465 VAL A 657 REMARK 465 TYR A 658 REMARK 465 SER A 659 REMARK 465 ASP A 660 REMARK 465 SER A 661 REMARK 465 GLU A 662 REMARK 465 ASP A 663 REMARK 465 ASP A 664 REMARK 465 VAL A 665 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 208 27.46 46.56 REMARK 500 ASN A 241 -44.72 -143.16 REMARK 500 ASP A 305 97.92 -164.78 REMARK 500 GLN A 320 -18.23 -143.75 REMARK 500 ARG A 341 143.46 -172.04 REMARK 500 ALA A 405 78.80 -69.30 REMARK 500 ASN A 648 19.16 -147.62 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 703 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 371 SG REMARK 620 2 CYS A 374 SG 117.2 REMARK 620 3 CYS A 395 SG 116.2 89.3 REMARK 620 4 CYS A 398 SG 113.5 111.5 106.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 4TQ A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue 1NS A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: binding site for residue ZN A 703 DBREF 4ZZI A 183 632 UNP Q96EB6 SIR1_HUMAN 183 505 SEQADV 4ZZI GLY A 633 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI GLY A 634 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI GLY A 635 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI SER A 636 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI GLY A 637 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI GLY A 638 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI GLY A 639 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI SER A 640 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI GLN A 641 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI TYR A 642 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI LEU A 643 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI PHE A 644 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI LEU A 645 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI PRO A 646 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI PRO A 647 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI ASN A 648 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI ARG A 649 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI TYR A 650 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI ILE A 651 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI PHE A 652 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI HIS A 653 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI GLY A 654 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI ALA A 655 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI GLU A 656 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI VAL A 657 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI TYR A 658 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI SER A 659 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI ASP A 660 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI SER A 661 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI GLU A 662 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI ASP A 663 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI ASP A 664 UNP Q96EB6 EXPRESSION TAG SEQADV 4ZZI VAL A 665 UNP Q96EB6 EXPRESSION TAG SEQRES 1 A 356 GLY PRO TYR THR PHE VAL GLN GLN HIS LEU MET ILE GLY SEQRES 2 A 356 THR ASP PRO ARG THR ILE LEU LYS ASP LEU LEU PRO GLU SEQRES 3 A 356 THR ILE PRO PRO PRO GLU LEU ASP ASP MET THR LEU TRP SEQRES 4 A 356 GLN ILE VAL ILE ASN ILE LEU SER GLU PRO PRO LYS ARG SEQRES 5 A 356 LYS LYS ARG LYS ASP ILE ASN THR ILE GLU ASP ALA VAL SEQRES 6 A 356 LYS LEU LEU GLN GLU CYS LYS LYS ILE ILE VAL LEU THR SEQRES 7 A 356 GLY ALA GLY VAL SER VAL SER CYS GLY ILE PRO ASP PHE SEQRES 8 A 356 ARG SER ARG ASP GLY ILE TYR ALA ARG LEU ALA VAL ASP SEQRES 9 A 356 PHE PRO ASP LEU PRO ASP PRO GLN ALA MET PHE ASP ILE SEQRES 10 A 356 GLU TYR PHE ARG LYS ASP PRO ARG PRO PHE PHE LYS PHE SEQRES 11 A 356 ALA LYS GLU ILE TYR PRO GLY GLN PHE GLN PRO SER LEU SEQRES 12 A 356 CYS HIS LYS PHE ILE ALA LEU SER ASP LYS GLU GLY LYS SEQRES 13 A 356 LEU LEU ARG ASN TYR THR GLN ASN ILE ASP THR LEU GLU SEQRES 14 A 356 GLN VAL ALA GLY ILE GLN ARG ILE ILE GLN CYS HIS GLY SEQRES 15 A 356 SER PHE ALA THR ALA SER CYS LEU ILE CYS LYS TYR LYS SEQRES 16 A 356 VAL ASP CYS GLU ALA VAL ARG GLY ASP ILE PHE ASN GLN SEQRES 17 A 356 VAL VAL PRO ARG CYS PRO ARG CYS PRO ALA ASP GLU PRO SEQRES 18 A 356 LEU ALA ILE MET LYS PRO GLU ILE VAL PHE PHE GLY GLU SEQRES 19 A 356 ASN LEU PRO GLU GLN PHE HIS ARG ALA MET LYS TYR ASP SEQRES 20 A 356 LYS ASP GLU VAL ASP LEU LEU ILE VAL ILE GLY SER SER SEQRES 21 A 356 LEU LYS VAL ARG PRO VAL ALA LEU ILE PRO SER SER ILE SEQRES 22 A 356 PRO HIS GLU VAL PRO GLN ILE LEU ILE ASN ARG GLU PRO SEQRES 23 A 356 LEU PRO HIS LEU HIS PHE ASP VAL GLU LEU LEU GLY ASP SEQRES 24 A 356 CYS ASP VAL ILE ILE ASN GLU LEU CYS HIS ARG LEU GLY SEQRES 25 A 356 GLY GLU TYR ALA LYS LEU CYS CYS ASN PRO VAL GLY GLY SEQRES 26 A 356 GLY SER GLY GLY GLY SER GLN TYR LEU PHE LEU PRO PRO SEQRES 27 A 356 ASN ARG TYR ILE PHE HIS GLY ALA GLU VAL TYR SER ASP SEQRES 28 A 356 SER GLU ASP ASP VAL HET 4TQ A 701 36 HET 1NS A 702 25 HET ZN A 703 1 HETNAM 4TQ (3S)-1,3-DIMETHYL-N-[3-(1,3-OXAZOL-5-YL)PHENYL]-6-[3- HETNAM 2 4TQ (TRIFLUOROMETHYL)PHENYL]-2,3-DIHYDROPYRIDO[2,3- HETNAM 3 4TQ B]PYRAZINE-4(1H)-CARBOXAMIDE HETNAM 1NS 4-(4-{2-[(METHYLSULFONYL)AMINO]ETHYL}PIPERIDIN-1-YL) HETNAM 2 1NS THIENO[3,2-D]PYRIMIDINE-6-CARBOXAMIDE HETNAM ZN ZINC ION FORMUL 2 4TQ C26 H22 F3 N5 O2 FORMUL 3 1NS C15 H21 N5 O3 S2 FORMUL 4 ZN ZN 2+ FORMUL 5 HOH *26(H2 O) HELIX 1 AA1 GLY A 183 GLY A 195 1 13 HELIX 2 AA2 ASP A 197 LEU A 206 1 10 HELIX 3 AA3 ASP A 216 SER A 229 1 14 HELIX 4 AA4 THR A 242 CYS A 253 1 12 HELIX 5 AA5 ALA A 262 VAL A 266 5 5 HELIX 6 AA6 ARG A 282 PHE A 287 1 6 HELIX 7 AA7 PRO A 293 PHE A 297 5 5 HELIX 8 AA8 ASP A 298 ASP A 305 1 8 HELIX 9 AA9 PRO A 306 ILE A 316 1 11 HELIX 10 AB1 SER A 324 GLU A 336 1 13 HELIX 11 AB2 THR A 349 GLY A 355 1 7 HELIX 12 AB3 CYS A 380 ASN A 389 1 10 HELIX 13 AB4 PRO A 419 LYS A 430 1 12 HELIX 14 AB5 PRO A 447 SER A 454 5 8 HELIX 15 AB6 ASP A 481 GLY A 494 1 14 HELIX 16 AB7 GLY A 494 LYS A 499 1 6 SHEET 1 AA1 8 ILE A 359 GLN A 361 0 SHEET 2 AA1 8 LEU A 339 THR A 344 1 N ASN A 342 O ILE A 360 SHEET 3 AA1 8 ILE A 256 THR A 260 1 N VAL A 258 O ARG A 341 SHEET 4 AA1 8 LEU A 435 ILE A 439 1 O LEU A 435 N ILE A 257 SHEET 5 AA1 8 GLN A 461 ASN A 465 1 O ILE A 464 N VAL A 438 SHEET 6 AA1 8 VAL A 476 LEU A 479 1 O LEU A 478 N LEU A 463 SHEET 7 AA1 8 ARG A 649 ILE A 651 1 O TYR A 650 N LEU A 479 SHEET 8 AA1 8 LEU A 643 LEU A 645 -1 N LEU A 645 O ARG A 649 SHEET 1 AA2 3 LYS A 377 ASP A 379 0 SHEET 2 AA2 3 GLY A 364 CYS A 371 -1 N ALA A 369 O VAL A 378 SHEET 3 AA2 3 MET A 407 ILE A 411 -1 O LYS A 408 N SER A 370 LINK SG CYS A 371 ZN ZN A 703 1555 1555 2.42 LINK SG CYS A 374 ZN ZN A 703 1555 1555 2.42 LINK SG CYS A 395 ZN ZN A 703 1555 1555 2.57 LINK SG CYS A 398 ZN ZN A 703 1555 1555 2.37 CISPEP 1 ARG A 446 PRO A 447 0 9.03 CISPEP 2 PRO A 646 PRO A 647 0 1.73 SITE 1 AC1 6 LEU A 206 THR A 209 PRO A 211 PRO A 212 SITE 2 AC1 6 ILE A 223 ASN A 226 SITE 1 AC2 13 ALA A 262 ILE A 270 ASP A 272 PHE A 273 SITE 2 AC2 13 PHE A 297 GLN A 345 ASN A 346 ILE A 347 SITE 3 AC2 13 ASP A 348 HIS A 363 VAL A 412 PHE A 414 SITE 4 AC2 13 HOH A 808 SITE 1 AC3 4 CYS A 371 CYS A 374 CYS A 395 CYS A 398 CRYST1 122.150 122.150 104.920 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008187 0.004727 0.000000 0.00000 SCALE2 0.000000 0.009453 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009531 0.00000