HEADER HYDROLASE 13-APR-15 4ZZP TITLE DICTYOSTELIUM PURPUREUM CELLOBIOHYDROLASE CEL7A APO STRUCTURE COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELLULOSE 1,4-BETA-CELLOBIOSIDASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SECRETED ENZYME, RESIDUES 19-457; COMPND 5 EC: 3.2.1.176; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DICTYOSTELIUM PURPUREUM; SOURCE 3 ORGANISM_COMMON: CELLULAR SLIME MOLD; SOURCE 4 ORGANISM_TAXID: 5786; SOURCE 5 EXPRESSION_SYSTEM: TRICHODERMA REESEI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 431241; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: QM6A; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: AST 1116; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PTRENO KEYWDS HYDROLASE, GLYCOSIDE HYDROLASE, CELLOBIOHYDROLASE, CELLULASE EXPDTA X-RAY DIFFRACTION AUTHOR M.H.MOMENI,S.E.HOBDEY,B.KNOTT,G.T.BECKHAM,J.STAHLBERG REVDAT 5 10-JAN-24 4ZZP 1 HETSYN REVDAT 4 29-JUL-20 4ZZP 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE REVDAT 3 11-MAR-20 4ZZP 1 SEQRES LINK REVDAT 2 01-JUN-16 4ZZP 1 JRNL REVDAT 1 13-APR-16 4ZZP 0 JRNL AUTH S.E.HOBDEY,B.C.KNOTT,M.HADDAD MOMENI,L.E.TAYLOR, JRNL AUTH 2 A.S.BORISOVA,K.K.PODKAMINER,T.A.VANDERWALL,M.E.HIMMEL, JRNL AUTH 3 S.R.DECKER,G.T.BECKHAM,J.STAHLBERG JRNL TITL BIOCHEMICAL AND STRUCTURAL CHARACTERIZATION OF TWO JRNL TITL 2 DICTYOSTELIUM CELLOBIOHYDROLASES FROM THE AMOEBOZOA KINGDOM JRNL TITL 3 REVEAL A HIGH CONSERVATION BETWEEN DISTANT PHYLOGENETIC JRNL TITL 4 TREES OF LIFE. JRNL REF APPL.ENVIRON.MICROBIOL. V. 82 3395 2016 JRNL REFN ISSN 0099-2240 JRNL PMID 27037126 JRNL DOI 10.1128/AEM.00163-16 REMARK 2 REMARK 2 RESOLUTION. 2.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.8.0073 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 84.25 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 21569 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.239 REMARK 3 R VALUE (WORKING SET) : 0.235 REMARK 3 FREE R VALUE : 0.313 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1144 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.77 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1562 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.64 REMARK 3 BIN R VALUE (WORKING SET) : 0.2480 REMARK 3 BIN FREE R VALUE SET COUNT : 87 REMARK 3 BIN FREE R VALUE : 0.4020 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6608 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 42 REMARK 3 SOLVENT ATOMS : 170 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 15.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.81000 REMARK 3 B22 (A**2) : 2.29000 REMARK 3 B33 (A**2) : -1.48000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.485 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.382 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 18.448 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.884 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.797 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6860 ; 0.006 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 5974 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9363 ; 1.269 ; 1.943 REMARK 3 BOND ANGLES OTHERS (DEGREES): 13830 ; 0.733 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 881 ; 6.239 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 314 ;35.253 ;25.796 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1022 ;15.015 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 18 ;19.129 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1017 ; 0.060 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8030 ; 0.003 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1548 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3504 ; 0.316 ; 1.614 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 3503 ; 0.316 ; 1.614 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4378 ; 0.587 ; 2.421 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): 4379 ; 0.587 ; 2.421 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3356 ; 0.186 ; 1.601 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): 3356 ; 0.186 ; 1.601 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): 4979 ; 0.349 ; 2.399 REMARK 3 LONG RANGE B REFINED ATOMS (A**2): 7749 ; 1.465 ;12.680 REMARK 3 LONG RANGE B OTHER ATOMS (A**2): 7694 ; 1.453 ;12.746 REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 4ZZP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-APR-15. REMARK 100 THE DEPOSITION ID IS D_1290063398. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-JUL-14 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.87 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : SILICON TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22787 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.700 REMARK 200 RESOLUTION RANGE LOW (A) : 46.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.600 REMARK 200 R MERGE (I) : 0.25000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 6.30 REMARK 200 R MERGE FOR SHELL (I) : 0.50000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: REFMAC REMARK 200 STARTING MODEL: PDB ENTRY 4D5J REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM MALONATE PH 7.0, 12% W/V REMARK 280 PEG 3350. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.82150 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 84.25150 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 42.59250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 84.25150 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.82150 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 42.59250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASN A 438 REMARK 465 ASN A 439 REMARK 465 ASN B 438 REMARK 465 ASN B 439 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 ND2 ASN A 269 O5 NAG A 1438 1.45 REMARK 500 OD1 ASN A 269 C1 NAG A 1438 1.48 REMARK 500 CG ASN A 269 C1 NAG A 1438 1.56 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 THR A 47 103.57 54.70 REMARK 500 ASP A 87 -100.54 56.24 REMARK 500 SER A 98 -119.60 -150.86 REMARK 500 GLN A 124 -168.85 -115.52 REMARK 500 SER A 239 -83.63 48.65 REMARK 500 ASP A 379 25.65 47.60 REMARK 500 SER A 385 178.42 65.99 REMARK 500 ASN B 53 29.81 -144.51 REMARK 500 GLU B 86 119.46 -169.20 REMARK 500 ASP B 87 -105.48 62.58 REMARK 500 SER B 98 130.54 100.24 REMARK 500 SER B 239 -139.36 49.79 REMARK 500 SER B 248 -71.47 -69.79 REMARK 500 LYS B 303 -44.81 -137.39 REMARK 500 ALA B 378 18.20 -144.33 REMARK 500 ASP B 379 12.67 54.87 REMARK 500 THR B 394 33.90 -96.25 REMARK 500 PRO B 396 -163.75 -119.03 REMARK 500 PRO B 431 157.16 -46.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2099 DISTANCE = 6.94 ANGSTROMS REMARK 525 HOH A2100 DISTANCE = 8.37 ANGSTROMS REMARK 525 HOH B2017 DISTANCE = 6.06 ANGSTROMS REMARK 525 HOH B2068 DISTANCE = 6.24 ANGSTROMS REMARK 525 HOH B2069 DISTANCE = 8.34 ANGSTROMS REMARK 525 HOH B2075 DISTANCE = 8.02 ANGSTROMS REMARK 525 HOH B2076 DISTANCE = 7.71 ANGSTROMS REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 PYROGLUTAMIC ACID (PCA): MODIFIED N-TERMINAL GLN SIDECHAIN REMARK 600 N-ACETYL-D-GLUCOSAMINE (NAG): N-GLYCOSYLATION REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4ZZQ RELATED DB: PDB REMARK 900 DICTYOSTELIUM DISCOIDEUM CELLOBIOHYDROLASE CEL7A APO STRUCTURE DBREF 4ZZP A 1 439 UNP F0ZJZ1 F0ZJZ1_DICPU 19 457 DBREF 4ZZP B 1 439 UNP F0ZJZ1 F0ZJZ1_DICPU 19 457 SEQRES 1 A 439 PCA LYS VAL GLY LYS PHE SER PRO GLU VAL HIS PRO PRO SEQRES 2 A 439 ILE THR TRP GLN GLU CYS ALA ASP ASP GLY SER CYS LYS SEQRES 3 A 439 THR MET ASN GLY GLU ILE VAL ILE ASP ALA ASN TRP ARG SEQRES 4 A 439 TRP VAL HIS SER GLU GLN GLY THR ASN CYS TYR THR GLY SEQRES 5 A 439 ASN THR TRP ASN PRO THR LEU CYS PRO ASP ASP LYS THR SEQRES 6 A 439 CYS ALA GLU ASN CYS TYR LEU ASP GLY ALA ASN TYR GLU SEQRES 7 A 439 SER VAL TYR GLY ILE THR THR GLU ASP ASP SER VAL ARG SEQRES 8 A 439 LEU ASN PHE ILE THR GLN SER GLN GLY LYS ASN ILE GLY SEQRES 9 A 439 SER ARG THR PHE LEU MET ALA ASN SER THR ASN TYR GLN SEQRES 10 A 439 MET PHE TYR VAL LEU GLY GLN GLU PHE SER PHE ASP VAL SEQRES 11 A 439 ASP VAL SER ASN LEU ASP CYS GLY LEU ASN GLY ALA LEU SEQRES 12 A 439 TYR LEU VAL SER MET ASP SER ASP GLY GLY ILE ALA ARG SEQRES 13 A 439 PHE PRO SER ASN GLU ALA GLY ALA GLN TYR GLY THR GLY SEQRES 14 A 439 TYR CYS ASP ALA GLN CYS PRO ARG ASP LEU LYS PHE ILE SEQRES 15 A 439 SER GLY SER ALA ASN VAL GLU GLY TRP ILE PRO SER SER SEQRES 16 A 439 ASN ASN PRO ASN THR GLY TYR GLY ASN HIS GLY SER CYS SEQRES 17 A 439 CYS ALA GLU MET ASP LEU TRP GLU ALA ASN ASN MET ALA SEQRES 18 A 439 THR ALA LEU THR PRO HIS PRO CYS ASP THR SER SER GLN SEQRES 19 A 439 THR VAL CYS GLU SER ASP SER CYS GLY GLY ALA THR SER SEQRES 20 A 439 SER ASN ARG TYR GLY GLY LEU CYS ASP PRO ASP GLY CYS SEQRES 21 A 439 ASP TYR ASN PRO TYR ARG MET GLY ASN THR THR PHE PHE SEQRES 22 A 439 GLY PRO GLY GLN THR VAL ASP THR LYS SER VAL MET THR SEQRES 23 A 439 VAL VAL THR GLN PHE ILE THR ASN ASP GLY THR THR THR SEQRES 24 A 439 GLY THR LEU LYS SER ILE LYS ARG LEU TYR VAL GLN ASN SEQRES 25 A 439 GLY GLN VAL ILE SER GLN SER GLU SER THR VAL PRO GLY SEQRES 26 A 439 VAL ALA GLY ASN GLU ILE THR GLU ASP PHE CYS HIS ASN SEQRES 27 A 439 GLN LYS GLN VAL PHE GLY ASP LYS ASP SER PHE THR LYS SEQRES 28 A 439 HIS GLY GLY LEU ALA ALA MET GLY ASP ALA LEU LYS ASN SEQRES 29 A 439 GLY MET VAL LEU VAL LEU SER LEU TRP ASP ASP TYR LEU SEQRES 30 A 439 ALA ASP MET LEU TRP LEU ASP SER ASN TYR PRO THR THR SEQRES 31 A 439 SER PRO VAL THR GLU PRO GLY VAL ALA ARG GLY PRO CYS SEQRES 32 A 439 SER THR SER SER GLY THR PRO THR ASP VAL GLU SER LYS SEQRES 33 A 439 TYR PRO ASN ALA TYR VAL VAL TYR SER ASN ILE LYS VAL SEQRES 34 A 439 GLY PRO ILE ASN SER THR PHE LYS ASN ASN SEQRES 1 B 439 PCA LYS VAL GLY LYS PHE SER PRO GLU VAL HIS PRO PRO SEQRES 2 B 439 ILE THR TRP GLN GLU CYS ALA ASP ASP GLY SER CYS LYS SEQRES 3 B 439 THR MET ASN GLY GLU ILE VAL ILE ASP ALA ASN TRP ARG SEQRES 4 B 439 TRP VAL HIS SER GLU GLN GLY THR ASN CYS TYR THR GLY SEQRES 5 B 439 ASN THR TRP ASN PRO THR LEU CYS PRO ASP ASP LYS THR SEQRES 6 B 439 CYS ALA GLU ASN CYS TYR LEU ASP GLY ALA ASN TYR GLU SEQRES 7 B 439 SER VAL TYR GLY ILE THR THR GLU ASP ASP SER VAL ARG SEQRES 8 B 439 LEU ASN PHE ILE THR GLN SER GLN GLY LYS ASN ILE GLY SEQRES 9 B 439 SER ARG THR PHE LEU MET ALA ASN SER THR ASN TYR GLN SEQRES 10 B 439 MET PHE TYR VAL LEU GLY GLN GLU PHE SER PHE ASP VAL SEQRES 11 B 439 ASP VAL SER ASN LEU ASP CYS GLY LEU ASN GLY ALA LEU SEQRES 12 B 439 TYR LEU VAL SER MET ASP SER ASP GLY GLY ILE ALA ARG SEQRES 13 B 439 PHE PRO SER ASN GLU ALA GLY ALA GLN TYR GLY THR GLY SEQRES 14 B 439 TYR CYS ASP ALA GLN CYS PRO ARG ASP LEU LYS PHE ILE SEQRES 15 B 439 SER GLY SER ALA ASN VAL GLU GLY TRP ILE PRO SER SER SEQRES 16 B 439 ASN ASN PRO ASN THR GLY TYR GLY ASN HIS GLY SER CYS SEQRES 17 B 439 CYS ALA GLU MET ASP LEU TRP GLU ALA ASN ASN MET ALA SEQRES 18 B 439 THR ALA LEU THR PRO HIS PRO CYS ASP THR SER SER GLN SEQRES 19 B 439 THR VAL CYS GLU SER ASP SER CYS GLY GLY ALA THR SER SEQRES 20 B 439 SER ASN ARG TYR GLY GLY LEU CYS ASP PRO ASP GLY CYS SEQRES 21 B 439 ASP TYR ASN PRO TYR ARG MET GLY ASN THR THR PHE PHE SEQRES 22 B 439 GLY PRO GLY GLN THR VAL ASP THR LYS SER VAL MET THR SEQRES 23 B 439 VAL VAL THR GLN PHE ILE THR ASN ASP GLY THR THR THR SEQRES 24 B 439 GLY THR LEU LYS SER ILE LYS ARG LEU TYR VAL GLN ASN SEQRES 25 B 439 GLY GLN VAL ILE SER GLN SER GLU SER THR VAL PRO GLY SEQRES 26 B 439 VAL ALA GLY ASN GLU ILE THR GLU ASP PHE CYS HIS ASN SEQRES 27 B 439 GLN LYS GLN VAL PHE GLY ASP LYS ASP SER PHE THR LYS SEQRES 28 B 439 HIS GLY GLY LEU ALA ALA MET GLY ASP ALA LEU LYS ASN SEQRES 29 B 439 GLY MET VAL LEU VAL LEU SER LEU TRP ASP ASP TYR LEU SEQRES 30 B 439 ALA ASP MET LEU TRP LEU ASP SER ASN TYR PRO THR THR SEQRES 31 B 439 SER PRO VAL THR GLU PRO GLY VAL ALA ARG GLY PRO CYS SEQRES 32 B 439 SER THR SER SER GLY THR PRO THR ASP VAL GLU SER LYS SEQRES 33 B 439 TYR PRO ASN ALA TYR VAL VAL TYR SER ASN ILE LYS VAL SEQRES 34 B 439 GLY PRO ILE ASN SER THR PHE LYS ASN ASN MODRES 4ZZP ASN A 112 ASN GLYCOSYLATION SITE MODRES 4ZZP ASN A 269 ASN GLYCOSYLATION SITE MODRES 4ZZP ASN B 269 ASN GLYCOSYLATION SITE MODRES 4ZZP PCA A 1 GLU PYROGLUTAMIC ACID MODRES 4ZZP PCA B 1 GLU PYROGLUTAMIC ACID HET PCA A 1 8 HET PCA B 1 8 HET NAG A1438 14 HET NAG A1439 14 HET NAG B1438 14 HETNAM PCA PYROGLUTAMIC ACID HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 1 PCA 2(C5 H7 N O3) FORMUL 3 NAG 3(C8 H15 N O6) FORMUL 6 HOH *170(H2 O) HELIX 1 1 ALA A 36 ARG A 39 5 4 HELIX 2 2 ASP A 62 CYS A 70 1 9 HELIX 3 3 ALA A 162 GLY A 167 5 6 HELIX 4 4 THR A 332 GLY A 344 1 13 HELIX 5 5 ASP A 347 HIS A 352 1 6 HELIX 6 6 GLY A 353 ASN A 364 1 12 HELIX 7 7 THR A 409 TYR A 417 1 9 HELIX 8 8 ALA B 36 ARG B 39 5 4 HELIX 9 9 ASP B 62 CYS B 70 1 9 HELIX 10 10 ALA B 162 GLY B 167 5 6 HELIX 11 11 ASP B 240 CYS B 242 5 3 HELIX 12 12 THR B 332 GLY B 344 1 13 HELIX 13 13 ASP B 347 HIS B 352 1 6 HELIX 14 14 GLY B 353 ASN B 364 1 12 HELIX 15 15 MET B 380 SER B 385 1 6 HELIX 16 16 THR B 409 TYR B 417 1 9 SHEET 1 AA 2 LYS A 2 VAL A 3 0 SHEET 2 AA 2 TYR A 71 LEU A 72 1 N LEU A 72 O LYS A 2 SHEET 1 AB 7 ILE A 83 GLU A 86 0 SHEET 2 AB 7 SER A 89 ASN A 93 1 O SER A 89 N GLU A 86 SHEET 3 AB 7 TYR A 421 PRO A 431 1 O VAL A 422 N LEU A 92 SHEET 4 AB 7 GLN A 124 ASP A 131 -1 O GLU A 125 N GLY A 430 SHEET 5 AB 7 MET A 285 THR A 293 -1 O MET A 285 N VAL A 130 SHEET 6 AB 7 LEU A 302 GLN A 311 -1 N LYS A 303 O ILE A 292 SHEET 7 AB 7 GLN A 314 SER A 317 -1 O GLN A 314 N GLN A 311 SHEET 1 AC 7 ILE A 83 GLU A 86 0 SHEET 2 AC 7 SER A 89 ASN A 93 1 O SER A 89 N GLU A 86 SHEET 3 AC 7 TYR A 421 PRO A 431 1 O VAL A 422 N LEU A 92 SHEET 4 AC 7 PRO A 13 CYS A 19 1 O GLN A 17 N VAL A 429 SHEET 5 AC 7 CYS A 25 ILE A 34 -1 O LYS A 26 N GLU A 18 SHEET 6 AC 7 SER A 105 ASN A 112 -1 O PHE A 108 N VAL A 33 SHEET 7 AC 7 ASN A 115 TYR A 116 -1 O ASN A 115 N ALA A 111 SHEET 1 AD10 ILE A 83 GLU A 86 0 SHEET 2 AD10 SER A 89 ASN A 93 1 O SER A 89 N GLU A 86 SHEET 3 AD10 TYR A 421 PRO A 431 1 O VAL A 422 N LEU A 92 SHEET 4 AD10 PRO A 13 CYS A 19 1 O GLN A 17 N VAL A 429 SHEET 5 AD10 CYS A 25 ILE A 34 -1 O LYS A 26 N GLU A 18 SHEET 6 AD10 SER A 105 ASN A 112 -1 O PHE A 108 N VAL A 33 SHEET 7 AD10 MET A 366 ASP A 374 -1 O LEU A 368 N LEU A 109 SHEET 8 AD10 LEU A 139 VAL A 146 -1 O ASN A 140 N TRP A 373 SHEET 9 AD10 GLU A 211 ALA A 217 -1 O MET A 212 N LEU A 145 SHEET 10 AD10 THR A 222 HIS A 227 -1 O ALA A 223 N GLU A 216 SHEET 1 AE 8 ILE A 83 GLU A 86 0 SHEET 2 AE 8 SER A 89 ASN A 93 1 O SER A 89 N GLU A 86 SHEET 3 AE 8 TYR A 421 PRO A 431 1 O VAL A 422 N LEU A 92 SHEET 4 AE 8 PRO A 13 CYS A 19 1 O GLN A 17 N VAL A 429 SHEET 5 AE 8 CYS A 25 ILE A 34 -1 O LYS A 26 N GLU A 18 SHEET 6 AE 8 SER A 105 ASN A 112 -1 O PHE A 108 N VAL A 33 SHEET 7 AE 8 MET A 366 ASP A 374 -1 O LEU A 368 N LEU A 109 SHEET 8 AE 8 MET A 118 PHE A 119 -1 O PHE A 119 N MET A 366 SHEET 1 AF 2 ASN A 115 TYR A 116 0 SHEET 2 AF 2 SER A 105 ASN A 112 -1 N ALA A 111 O ASN A 115 SHEET 1 AG 2 TYR A 50 THR A 51 0 SHEET 2 AG 2 THR A 54 TRP A 55 -1 O THR A 54 N THR A 51 SHEET 1 AH 2 ILE A 95 GLN A 97 0 SHEET 2 AH 2 LYS A 101 ILE A 103 -1 O ASN A 102 N THR A 96 SHEET 1 AI 2 PHE A 181 ILE A 182 0 SHEET 2 AI 2 SER A 185 ALA A 186 -1 O SER A 185 N ILE A 182 SHEET 1 AJ 2 ILE A 192 PRO A 193 0 SHEET 2 AJ 2 GLY A 201 TYR A 202 -1 O TYR A 202 N ILE A 192 SHEET 1 AK 2 HIS A 205 CYS A 208 0 SHEET 2 AK 2 THR A 235 GLU A 238 -1 O THR A 235 N CYS A 208 SHEET 1 AL 2 PHE A 273 GLY A 274 0 SHEET 2 AL 2 VAL A 279 ASP A 280 1 O VAL A 279 N GLY A 274 SHEET 1 BA 3 LYS B 2 VAL B 3 0 SHEET 2 BA 3 TYR B 71 LEU B 72 1 N LEU B 72 O LYS B 2 SHEET 3 BA 3 VAL B 41 HIS B 42 -1 O HIS B 42 N TYR B 71 SHEET 1 BB 7 ILE B 83 GLU B 86 0 SHEET 2 BB 7 SER B 89 ASN B 93 -1 O SER B 89 N GLU B 86 SHEET 3 BB 7 TYR B 421 GLY B 430 -1 O VAL B 422 N LEU B 92 SHEET 4 BB 7 GLU B 125 ASP B 131 -1 O GLU B 125 N GLY B 430 SHEET 5 BB 7 MET B 285 THR B 293 -1 O MET B 285 N VAL B 130 SHEET 6 BB 7 LEU B 302 GLN B 311 -1 N LYS B 303 O ILE B 292 SHEET 7 BB 7 GLN B 314 SER B 317 -1 O GLN B 314 N GLN B 311 SHEET 1 BC10 ILE B 83 GLU B 86 0 SHEET 2 BC10 SER B 89 ASN B 93 -1 O SER B 89 N GLU B 86 SHEET 3 BC10 TYR B 421 GLY B 430 -1 O VAL B 422 N LEU B 92 SHEET 4 BC10 PRO B 13 CYS B 19 1 O GLN B 17 N VAL B 429 SHEET 5 BC10 CYS B 25 ILE B 34 -1 O LYS B 26 N GLU B 18 SHEET 6 BC10 SER B 105 MET B 110 -1 O PHE B 108 N VAL B 33 SHEET 7 BC10 VAL B 367 ASP B 374 -1 O LEU B 368 N LEU B 109 SHEET 8 BC10 LEU B 139 VAL B 146 -1 O ASN B 140 N TRP B 373 SHEET 9 BC10 GLU B 211 ALA B 217 -1 O MET B 212 N LEU B 145 SHEET 10 BC10 THR B 222 HIS B 227 -1 O ALA B 223 N GLU B 216 SHEET 1 BD 2 TYR B 50 THR B 51 0 SHEET 2 BD 2 THR B 54 TRP B 55 -1 O THR B 54 N THR B 51 SHEET 1 BE 2 ILE B 95 GLN B 97 0 SHEET 2 BE 2 LYS B 101 ILE B 103 -1 O ASN B 102 N THR B 96 SHEET 1 BF 2 ILE B 192 PRO B 193 0 SHEET 2 BF 2 GLY B 201 TYR B 202 -1 O TYR B 202 N ILE B 192 SHEET 1 BG 2 HIS B 205 CYS B 208 0 SHEET 2 BG 2 THR B 235 GLU B 238 -1 O THR B 235 N CYS B 208 SHEET 1 BH 2 PHE B 273 GLY B 274 0 SHEET 2 BH 2 VAL B 279 ASP B 280 1 O VAL B 279 N GLY B 274 SSBOND 1 CYS A 19 CYS A 25 1555 1555 2.01 SSBOND 2 CYS A 49 CYS A 70 1555 1555 2.02 SSBOND 3 CYS A 60 CYS A 66 1555 1555 2.03 SSBOND 4 CYS A 137 CYS A 403 1555 1555 2.00 SSBOND 5 CYS A 171 CYS A 209 1555 1555 2.03 SSBOND 6 CYS A 175 CYS A 208 1555 1555 2.01 SSBOND 7 CYS A 229 CYS A 255 1555 1555 2.04 SSBOND 8 CYS A 237 CYS A 242 1555 1555 2.01 SSBOND 9 CYS A 260 CYS A 336 1555 1555 2.04 SSBOND 10 CYS B 19 CYS B 25 1555 1555 2.03 SSBOND 11 CYS B 49 CYS B 70 1555 1555 2.03 SSBOND 12 CYS B 60 CYS B 66 1555 1555 2.03 SSBOND 13 CYS B 137 CYS B 403 1555 1555 2.03 SSBOND 14 CYS B 171 CYS B 209 1555 1555 2.03 SSBOND 15 CYS B 175 CYS B 208 1555 1555 2.03 SSBOND 16 CYS B 229 CYS B 255 1555 1555 2.03 SSBOND 17 CYS B 237 CYS B 242 1555 1555 2.02 SSBOND 18 CYS B 260 CYS B 336 1555 1555 2.03 LINK C PCA A 1 N LYS A 2 1555 1555 1.33 LINK ND2 ASN A 112 C1 NAG A1439 1555 1555 1.46 LINK ND2 ASN A 269 C1 NAG A1438 1555 1555 1.36 LINK C PCA B 1 N LYS B 2 1555 1555 1.33 LINK ND2 ASN B 269 C1 NAG B1438 1555 1555 1.44 CISPEP 1 GLY A 46 THR A 47 0 15.07 CISPEP 2 PRO A 324 GLY A 325 0 -6.52 CISPEP 3 TYR A 387 PRO A 388 0 -4.48 CISPEP 4 TYR A 387 PRO A 388 0 -4.89 CISPEP 5 GLN B 45 GLY B 46 0 1.75 CISPEP 6 SER B 98 GLN B 99 0 -9.75 CISPEP 7 PRO B 324 GLY B 325 0 -3.02 CISPEP 8 TYR B 387 PRO B 388 0 -5.29 CISPEP 9 GLU B 395 PRO B 396 0 11.78 CISPEP 10 PHE B 436 LYS B 437 0 20.80 CRYST1 55.643 85.185 168.503 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017972 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011739 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005935 0.00000 HETATM 1 N PCA A 1 -2.189 -15.441 -26.026 1.00 26.86 N HETATM 2 CA PCA A 1 -1.044 -14.658 -25.570 1.00 26.51 C HETATM 3 CB PCA A 1 -1.407 -13.214 -25.916 1.00 26.73 C HETATM 4 CG PCA A 1 -2.866 -13.230 -26.370 1.00 26.83 C HETATM 5 CD PCA A 1 -3.211 -14.697 -26.439 1.00 26.82 C HETATM 6 OE PCA A 1 -4.291 -15.111 -26.825 1.00 26.41 O HETATM 7 C PCA A 1 -0.752 -14.780 -24.099 1.00 25.85 C HETATM 8 O PCA A 1 -1.674 -14.856 -23.288 1.00 25.73 O