data_4A9L # _entry.id 4A9L # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.391 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4A9L pdb_00004a9l 10.2210/pdb4a9l/pdb PDBE EBI-50489 ? ? WWPDB D_1290050489 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-01-11 2 'Structure model' 1 1 2012-02-08 3 'Structure model' 1 2 2024-05-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Other 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' chem_comp_atom 2 3 'Structure model' chem_comp_bond 3 3 'Structure model' database_2 4 3 'Structure model' pdbx_database_status 5 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_database_status.status_code_sf' 4 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 5 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 6 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4A9L _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2011-11-26 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 2YEL unspecified 'CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRD4 WITH THE INHIBITOR GW841819X' PDB 2YEM unspecified 'CRYSTAL STRUCTURE OF THE SECOND BROMODOMAIN OF HUMAN BRD4 WITH THE INHIBITOR GW841819X' PDB 3ZYU unspecified 'CRYSTAL STRUCTURE OF THE FIRST BROMODOMAIN OF HUMAN BRD4 IN COMPLEX WITH I-BET151(GSK1210151A)' PDB 4A9K unspecified 'BROMODOMAIN OF HUMAN CREBBP WITH N-(4-HYDROXYPHENYL) ACETAMIDE' PDB 4A9J unspecified 'N-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH N-(4- HYDROXYPHENYL)ACETAMIDE' PDB 4A9E unspecified 'N-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH 3-METHYL-1 ,2,3,4-TETRAHYDROQUINAZOLIN-2-ONE' PDB 4A9H unspecified 'N-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH 1-(2- METHYL-1,2,3,4-TETRAHYDROQUINOLIN-1-YL)ETHAN-1-ONE' PDB 4A9F unspecified 'N-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH 1- METHYLPYRROLIDIN-2-ONE' PDB 4A9I unspecified 'N-TERMINAL BROMODOMAIN OF HUMAN BRD2 WITH 3-METHYL-1 ,2,3,4-TETRAHYDROQUINAZOLIN-2-ONE' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chung, C.W.' 1 'Bamborough, P.' 2 # _citation.id primary _citation.title 'Fragment-Based Discovery of Bromodomain Inhibitors Part 1: Inhibitor Binding Modes and Implications for Lead Discovery.' _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 55 _citation.page_first 576 _citation.page_last ? _citation.year 2012 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 22136404 _citation.pdbx_database_id_DOI 10.1021/JM201320W # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chung, C.W.' 1 ? primary 'Dean, A.W.' 2 ? primary 'Woolven, J.M.' 3 ? primary 'Bamborough, P.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'BROMODOMAIN-CONTAINING PROTEIN 4' 15099.380 1 ? ? 'N-TERMINAL BROMODOMAIN, RESIDUES 44-168' ? 2 non-polymer syn 1,2-ETHANEDIOL 62.068 3 ? ? ? ? 3 non-polymer syn '1,3-dimethyl-6-(morpholin-4-ylsulfonyl)-3,4-dihydroquinazolin-2(1H)-one' 325.383 1 ? ? ? ? 4 non-polymer syn 'NITRATE ION' 62.005 2 ? ? ? ? 5 water nat water 18.015 237 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PROTEIN HUNK1, HUMAN BRD4' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWN AQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _entity_poly.pdbx_seq_one_letter_code_can ;SMNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWN AQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 1,2-ETHANEDIOL EDO 3 '1,3-dimethyl-6-(morpholin-4-ylsulfonyl)-3,4-dihydroquinazolin-2(1H)-one' P9L 4 'NITRATE ION' NO3 5 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ASN n 1 4 PRO n 1 5 PRO n 1 6 PRO n 1 7 PRO n 1 8 GLU n 1 9 THR n 1 10 SER n 1 11 ASN n 1 12 PRO n 1 13 ASN n 1 14 LYS n 1 15 PRO n 1 16 LYS n 1 17 ARG n 1 18 GLN n 1 19 THR n 1 20 ASN n 1 21 GLN n 1 22 LEU n 1 23 GLN n 1 24 TYR n 1 25 LEU n 1 26 LEU n 1 27 ARG n 1 28 VAL n 1 29 VAL n 1 30 LEU n 1 31 LYS n 1 32 THR n 1 33 LEU n 1 34 TRP n 1 35 LYS n 1 36 HIS n 1 37 GLN n 1 38 PHE n 1 39 ALA n 1 40 TRP n 1 41 PRO n 1 42 PHE n 1 43 GLN n 1 44 GLN n 1 45 PRO n 1 46 VAL n 1 47 ASP n 1 48 ALA n 1 49 VAL n 1 50 LYS n 1 51 LEU n 1 52 ASN n 1 53 LEU n 1 54 PRO n 1 55 ASP n 1 56 TYR n 1 57 TYR n 1 58 LYS n 1 59 ILE n 1 60 ILE n 1 61 LYS n 1 62 THR n 1 63 PRO n 1 64 MET n 1 65 ASP n 1 66 MET n 1 67 GLY n 1 68 THR n 1 69 ILE n 1 70 LYS n 1 71 LYS n 1 72 ARG n 1 73 LEU n 1 74 GLU n 1 75 ASN n 1 76 ASN n 1 77 TYR n 1 78 TYR n 1 79 TRP n 1 80 ASN n 1 81 ALA n 1 82 GLN n 1 83 GLU n 1 84 CYS n 1 85 ILE n 1 86 GLN n 1 87 ASP n 1 88 PHE n 1 89 ASN n 1 90 THR n 1 91 MET n 1 92 PHE n 1 93 THR n 1 94 ASN n 1 95 CYS n 1 96 TYR n 1 97 ILE n 1 98 TYR n 1 99 ASN n 1 100 LYS n 1 101 PRO n 1 102 GLY n 1 103 ASP n 1 104 ASP n 1 105 ILE n 1 106 VAL n 1 107 LEU n 1 108 MET n 1 109 ALA n 1 110 GLU n 1 111 ALA n 1 112 LEU n 1 113 GLU n 1 114 LYS n 1 115 LEU n 1 116 PHE n 1 117 LEU n 1 118 GLN n 1 119 LYS n 1 120 ILE n 1 121 ASN n 1 122 GLU n 1 123 LEU n 1 124 PRO n 1 125 THR n 1 126 GLU n 1 127 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET26B _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NO3 non-polymer . 'NITRATE ION' ? 'N O3 -1' 62.005 P9L non-polymer . '1,3-dimethyl-6-(morpholin-4-ylsulfonyl)-3,4-dihydroquinazolin-2(1H)-one' ? 'C14 H19 N3 O4 S' 325.383 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 42 42 SER SER A . n A 1 2 MET 2 43 43 MET MET A . n A 1 3 ASN 3 44 44 ASN ASN A . n A 1 4 PRO 4 45 45 PRO PRO A . n A 1 5 PRO 5 46 46 PRO PRO A . n A 1 6 PRO 6 47 47 PRO PRO A . n A 1 7 PRO 7 48 48 PRO PRO A . n A 1 8 GLU 8 49 49 GLU GLU A . n A 1 9 THR 9 50 50 THR THR A . n A 1 10 SER 10 51 51 SER SER A . n A 1 11 ASN 11 52 52 ASN ASN A . n A 1 12 PRO 12 53 53 PRO PRO A . n A 1 13 ASN 13 54 54 ASN ASN A . n A 1 14 LYS 14 55 55 LYS LYS A . n A 1 15 PRO 15 56 56 PRO PRO A . n A 1 16 LYS 16 57 57 LYS LYS A . n A 1 17 ARG 17 58 58 ARG ARG A . n A 1 18 GLN 18 59 59 GLN GLN A . n A 1 19 THR 19 60 60 THR THR A . n A 1 20 ASN 20 61 61 ASN ASN A . n A 1 21 GLN 21 62 62 GLN GLN A . n A 1 22 LEU 22 63 63 LEU LEU A . n A 1 23 GLN 23 64 64 GLN GLN A . n A 1 24 TYR 24 65 65 TYR TYR A . n A 1 25 LEU 25 66 66 LEU LEU A . n A 1 26 LEU 26 67 67 LEU LEU A . n A 1 27 ARG 27 68 68 ARG ARG A . n A 1 28 VAL 28 69 69 VAL VAL A . n A 1 29 VAL 29 70 70 VAL VAL A . n A 1 30 LEU 30 71 71 LEU LEU A . n A 1 31 LYS 31 72 72 LYS LYS A . n A 1 32 THR 32 73 73 THR THR A . n A 1 33 LEU 33 74 74 LEU LEU A . n A 1 34 TRP 34 75 75 TRP TRP A . n A 1 35 LYS 35 76 76 LYS LYS A . n A 1 36 HIS 36 77 77 HIS HIS A . n A 1 37 GLN 37 78 78 GLN GLN A . n A 1 38 PHE 38 79 79 PHE PHE A . n A 1 39 ALA 39 80 80 ALA ALA A . n A 1 40 TRP 40 81 81 TRP TRP A . n A 1 41 PRO 41 82 82 PRO PRO A . n A 1 42 PHE 42 83 83 PHE PHE A . n A 1 43 GLN 43 84 84 GLN GLN A . n A 1 44 GLN 44 85 85 GLN GLN A . n A 1 45 PRO 45 86 86 PRO PRO A . n A 1 46 VAL 46 87 87 VAL VAL A . n A 1 47 ASP 47 88 88 ASP ASP A . n A 1 48 ALA 48 89 89 ALA ALA A . n A 1 49 VAL 49 90 90 VAL VAL A . n A 1 50 LYS 50 91 91 LYS LYS A . n A 1 51 LEU 51 92 92 LEU LEU A . n A 1 52 ASN 52 93 93 ASN ASN A . n A 1 53 LEU 53 94 94 LEU LEU A . n A 1 54 PRO 54 95 95 PRO PRO A . n A 1 55 ASP 55 96 96 ASP ASP A . n A 1 56 TYR 56 97 97 TYR TYR A . n A 1 57 TYR 57 98 98 TYR TYR A . n A 1 58 LYS 58 99 99 LYS LYS A . n A 1 59 ILE 59 100 100 ILE ILE A . n A 1 60 ILE 60 101 101 ILE ILE A . n A 1 61 LYS 61 102 102 LYS LYS A . n A 1 62 THR 62 103 103 THR THR A . n A 1 63 PRO 63 104 104 PRO PRO A . n A 1 64 MET 64 105 105 MET MET A . n A 1 65 ASP 65 106 106 ASP ASP A . n A 1 66 MET 66 107 107 MET MET A . n A 1 67 GLY 67 108 108 GLY GLY A . n A 1 68 THR 68 109 109 THR THR A . n A 1 69 ILE 69 110 110 ILE ILE A . n A 1 70 LYS 70 111 111 LYS LYS A . n A 1 71 LYS 71 112 112 LYS LYS A . n A 1 72 ARG 72 113 113 ARG ARG A . n A 1 73 LEU 73 114 114 LEU LEU A . n A 1 74 GLU 74 115 115 GLU GLU A . n A 1 75 ASN 75 116 116 ASN ASN A . n A 1 76 ASN 76 117 117 ASN ASN A . n A 1 77 TYR 77 118 118 TYR TYR A . n A 1 78 TYR 78 119 119 TYR TYR A . n A 1 79 TRP 79 120 120 TRP TRP A . n A 1 80 ASN 80 121 121 ASN ASN A . n A 1 81 ALA 81 122 122 ALA ALA A . n A 1 82 GLN 82 123 123 GLN GLN A . n A 1 83 GLU 83 124 124 GLU GLU A . n A 1 84 CYS 84 125 125 CYS CYS A . n A 1 85 ILE 85 126 126 ILE ILE A . n A 1 86 GLN 86 127 127 GLN GLN A . n A 1 87 ASP 87 128 128 ASP ASP A . n A 1 88 PHE 88 129 129 PHE PHE A . n A 1 89 ASN 89 130 130 ASN ASN A . n A 1 90 THR 90 131 131 THR THR A . n A 1 91 MET 91 132 132 MET MET A . n A 1 92 PHE 92 133 133 PHE PHE A . n A 1 93 THR 93 134 134 THR THR A . n A 1 94 ASN 94 135 135 ASN ASN A . n A 1 95 CYS 95 136 136 CYS CYS A . n A 1 96 TYR 96 137 137 TYR TYR A . n A 1 97 ILE 97 138 138 ILE ILE A . n A 1 98 TYR 98 139 139 TYR TYR A . n A 1 99 ASN 99 140 140 ASN ASN A . n A 1 100 LYS 100 141 141 LYS LYS A . n A 1 101 PRO 101 142 142 PRO PRO A . n A 1 102 GLY 102 143 143 GLY GLY A . n A 1 103 ASP 103 144 144 ASP ASP A . n A 1 104 ASP 104 145 145 ASP ASP A . n A 1 105 ILE 105 146 146 ILE ILE A . n A 1 106 VAL 106 147 147 VAL VAL A . n A 1 107 LEU 107 148 148 LEU LEU A . n A 1 108 MET 108 149 149 MET MET A . n A 1 109 ALA 109 150 150 ALA ALA A . n A 1 110 GLU 110 151 151 GLU GLU A . n A 1 111 ALA 111 152 152 ALA ALA A . n A 1 112 LEU 112 153 153 LEU LEU A . n A 1 113 GLU 113 154 154 GLU GLU A . n A 1 114 LYS 114 155 155 LYS LYS A . n A 1 115 LEU 115 156 156 LEU LEU A . n A 1 116 PHE 116 157 157 PHE PHE A . n A 1 117 LEU 117 158 158 LEU LEU A . n A 1 118 GLN 118 159 159 GLN GLN A . n A 1 119 LYS 119 160 160 LYS LYS A . n A 1 120 ILE 120 161 161 ILE ILE A . n A 1 121 ASN 121 162 162 ASN ASN A . n A 1 122 GLU 122 163 163 GLU GLU A . n A 1 123 LEU 123 164 164 LEU LEU A . n A 1 124 PRO 124 165 165 PRO PRO A . n A 1 125 THR 125 166 166 THR THR A . n A 1 126 GLU 126 167 167 GLU GLU A . n A 1 127 GLU 127 168 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 EDO 1 1168 1168 EDO EDO A . C 2 EDO 1 1169 1169 EDO EDO A . D 2 EDO 1 1170 1170 EDO EDO A . E 3 P9L 1 1171 1171 P9L P9L A . F 4 NO3 1 1172 1172 NO3 NO3 A . G 4 NO3 1 1173 1173 NO3 NO3 A . H 5 HOH 1 2001 2001 HOH HOH A . H 5 HOH 2 2002 2002 HOH HOH A . H 5 HOH 3 2003 2003 HOH HOH A . H 5 HOH 4 2004 2004 HOH HOH A . H 5 HOH 5 2005 2005 HOH HOH A . H 5 HOH 6 2006 2006 HOH HOH A . H 5 HOH 7 2007 2007 HOH HOH A . H 5 HOH 8 2008 2008 HOH HOH A . H 5 HOH 9 2009 2009 HOH HOH A . H 5 HOH 10 2010 2010 HOH HOH A . H 5 HOH 11 2011 2011 HOH HOH A . H 5 HOH 12 2012 2012 HOH HOH A . H 5 HOH 13 2013 2013 HOH HOH A . H 5 HOH 14 2014 2014 HOH HOH A . H 5 HOH 15 2015 2015 HOH HOH A . H 5 HOH 16 2016 2016 HOH HOH A . H 5 HOH 17 2017 2017 HOH HOH A . H 5 HOH 18 2018 2018 HOH HOH A . H 5 HOH 19 2019 2019 HOH HOH A . H 5 HOH 20 2020 2020 HOH HOH A . H 5 HOH 21 2021 2021 HOH HOH A . H 5 HOH 22 2022 2022 HOH HOH A . H 5 HOH 23 2023 2023 HOH HOH A . H 5 HOH 24 2024 2024 HOH HOH A . H 5 HOH 25 2025 2025 HOH HOH A . H 5 HOH 26 2026 2026 HOH HOH A . H 5 HOH 27 2027 2027 HOH HOH A . H 5 HOH 28 2028 2028 HOH HOH A . H 5 HOH 29 2029 2029 HOH HOH A . H 5 HOH 30 2030 2030 HOH HOH A . H 5 HOH 31 2031 2031 HOH HOH A . H 5 HOH 32 2032 2032 HOH HOH A . H 5 HOH 33 2033 2033 HOH HOH A . H 5 HOH 34 2034 2034 HOH HOH A . H 5 HOH 35 2035 2035 HOH HOH A . H 5 HOH 36 2036 2036 HOH HOH A . H 5 HOH 37 2037 2037 HOH HOH A . H 5 HOH 38 2038 2038 HOH HOH A . H 5 HOH 39 2039 2039 HOH HOH A . H 5 HOH 40 2040 2040 HOH HOH A . H 5 HOH 41 2041 2041 HOH HOH A . H 5 HOH 42 2042 2042 HOH HOH A . H 5 HOH 43 2043 2043 HOH HOH A . H 5 HOH 44 2044 2044 HOH HOH A . H 5 HOH 45 2045 2045 HOH HOH A . H 5 HOH 46 2046 2046 HOH HOH A . H 5 HOH 47 2047 2047 HOH HOH A . H 5 HOH 48 2048 2048 HOH HOH A . H 5 HOH 49 2049 2049 HOH HOH A . H 5 HOH 50 2050 2050 HOH HOH A . H 5 HOH 51 2051 2051 HOH HOH A . H 5 HOH 52 2052 2052 HOH HOH A . H 5 HOH 53 2053 2053 HOH HOH A . H 5 HOH 54 2054 2054 HOH HOH A . H 5 HOH 55 2055 2055 HOH HOH A . H 5 HOH 56 2056 2056 HOH HOH A . H 5 HOH 57 2057 2057 HOH HOH A . H 5 HOH 58 2058 2058 HOH HOH A . H 5 HOH 59 2059 2059 HOH HOH A . H 5 HOH 60 2060 2060 HOH HOH A . H 5 HOH 61 2061 2061 HOH HOH A . H 5 HOH 62 2062 2062 HOH HOH A . H 5 HOH 63 2063 2063 HOH HOH A . H 5 HOH 64 2064 2064 HOH HOH A . H 5 HOH 65 2065 2065 HOH HOH A . H 5 HOH 66 2066 2066 HOH HOH A . H 5 HOH 67 2067 2067 HOH HOH A . H 5 HOH 68 2068 2068 HOH HOH A . H 5 HOH 69 2069 2069 HOH HOH A . H 5 HOH 70 2070 2070 HOH HOH A . H 5 HOH 71 2071 2071 HOH HOH A . H 5 HOH 72 2072 2072 HOH HOH A . H 5 HOH 73 2073 2073 HOH HOH A . H 5 HOH 74 2074 2074 HOH HOH A . H 5 HOH 75 2075 2075 HOH HOH A . H 5 HOH 76 2076 2076 HOH HOH A . H 5 HOH 77 2077 2077 HOH HOH A . H 5 HOH 78 2078 2078 HOH HOH A . H 5 HOH 79 2079 2079 HOH HOH A . H 5 HOH 80 2080 2080 HOH HOH A . H 5 HOH 81 2081 2081 HOH HOH A . H 5 HOH 82 2082 2082 HOH HOH A . H 5 HOH 83 2083 2083 HOH HOH A . H 5 HOH 84 2084 2084 HOH HOH A . H 5 HOH 85 2085 2085 HOH HOH A . H 5 HOH 86 2086 2086 HOH HOH A . H 5 HOH 87 2087 2087 HOH HOH A . H 5 HOH 88 2088 2088 HOH HOH A . H 5 HOH 89 2089 2089 HOH HOH A . H 5 HOH 90 2090 2090 HOH HOH A . H 5 HOH 91 2091 2091 HOH HOH A . H 5 HOH 92 2092 2092 HOH HOH A . H 5 HOH 93 2093 2093 HOH HOH A . H 5 HOH 94 2094 2094 HOH HOH A . H 5 HOH 95 2095 2095 HOH HOH A . H 5 HOH 96 2096 2096 HOH HOH A . H 5 HOH 97 2097 2097 HOH HOH A . H 5 HOH 98 2098 2098 HOH HOH A . H 5 HOH 99 2099 2099 HOH HOH A . H 5 HOH 100 2100 2100 HOH HOH A . H 5 HOH 101 2101 2101 HOH HOH A . H 5 HOH 102 2102 2102 HOH HOH A . H 5 HOH 103 2103 2103 HOH HOH A . H 5 HOH 104 2104 2104 HOH HOH A . H 5 HOH 105 2105 2105 HOH HOH A . H 5 HOH 106 2106 2106 HOH HOH A . H 5 HOH 107 2107 2107 HOH HOH A . H 5 HOH 108 2108 2108 HOH HOH A . H 5 HOH 109 2109 2109 HOH HOH A . H 5 HOH 110 2110 2110 HOH HOH A . H 5 HOH 111 2111 2111 HOH HOH A . H 5 HOH 112 2112 2112 HOH HOH A . H 5 HOH 113 2113 2113 HOH HOH A . H 5 HOH 114 2114 2114 HOH HOH A . H 5 HOH 115 2115 2115 HOH HOH A . H 5 HOH 116 2116 2116 HOH HOH A . H 5 HOH 117 2117 2117 HOH HOH A . H 5 HOH 118 2118 2118 HOH HOH A . H 5 HOH 119 2119 2119 HOH HOH A . H 5 HOH 120 2120 2120 HOH HOH A . H 5 HOH 121 2121 2121 HOH HOH A . H 5 HOH 122 2122 2122 HOH HOH A . H 5 HOH 123 2123 2123 HOH HOH A . H 5 HOH 124 2124 2124 HOH HOH A . H 5 HOH 125 2125 2125 HOH HOH A . H 5 HOH 126 2126 2126 HOH HOH A . H 5 HOH 127 2127 2127 HOH HOH A . H 5 HOH 128 2128 2128 HOH HOH A . H 5 HOH 129 2129 2129 HOH HOH A . H 5 HOH 130 2130 2130 HOH HOH A . H 5 HOH 131 2131 2131 HOH HOH A . H 5 HOH 132 2132 2132 HOH HOH A . H 5 HOH 133 2133 2133 HOH HOH A . H 5 HOH 134 2134 2134 HOH HOH A . H 5 HOH 135 2135 2135 HOH HOH A . H 5 HOH 136 2136 2136 HOH HOH A . H 5 HOH 137 2137 2137 HOH HOH A . H 5 HOH 138 2138 2138 HOH HOH A . H 5 HOH 139 2139 2139 HOH HOH A . H 5 HOH 140 2140 2140 HOH HOH A . H 5 HOH 141 2141 2141 HOH HOH A . H 5 HOH 142 2142 2142 HOH HOH A . H 5 HOH 143 2143 2143 HOH HOH A . H 5 HOH 144 2144 2144 HOH HOH A . H 5 HOH 145 2145 2145 HOH HOH A . H 5 HOH 146 2146 2146 HOH HOH A . H 5 HOH 147 2147 2147 HOH HOH A . H 5 HOH 148 2148 2148 HOH HOH A . H 5 HOH 149 2149 2149 HOH HOH A . H 5 HOH 150 2150 2150 HOH HOH A . H 5 HOH 151 2151 2151 HOH HOH A . H 5 HOH 152 2152 2152 HOH HOH A . H 5 HOH 153 2153 2153 HOH HOH A . H 5 HOH 154 2154 2154 HOH HOH A . H 5 HOH 155 2155 2155 HOH HOH A . H 5 HOH 156 2156 2156 HOH HOH A . H 5 HOH 157 2157 2157 HOH HOH A . H 5 HOH 158 2158 2158 HOH HOH A . H 5 HOH 159 2159 2159 HOH HOH A . H 5 HOH 160 2160 2160 HOH HOH A . H 5 HOH 161 2161 2161 HOH HOH A . H 5 HOH 162 2162 2162 HOH HOH A . H 5 HOH 163 2163 2163 HOH HOH A . H 5 HOH 164 2164 2164 HOH HOH A . H 5 HOH 165 2165 2165 HOH HOH A . H 5 HOH 166 2166 2166 HOH HOH A . H 5 HOH 167 2167 2167 HOH HOH A . H 5 HOH 168 2168 2168 HOH HOH A . H 5 HOH 169 2169 2169 HOH HOH A . H 5 HOH 170 2170 2170 HOH HOH A . H 5 HOH 171 2171 2171 HOH HOH A . H 5 HOH 172 2172 2172 HOH HOH A . H 5 HOH 173 2173 2173 HOH HOH A . H 5 HOH 174 2174 2174 HOH HOH A . H 5 HOH 175 2175 2175 HOH HOH A . H 5 HOH 176 2176 2176 HOH HOH A . H 5 HOH 177 2177 2177 HOH HOH A . H 5 HOH 178 2178 2178 HOH HOH A . H 5 HOH 179 2179 2179 HOH HOH A . H 5 HOH 180 2180 2180 HOH HOH A . H 5 HOH 181 2181 2181 HOH HOH A . H 5 HOH 182 2182 2182 HOH HOH A . H 5 HOH 183 2183 2183 HOH HOH A . H 5 HOH 184 2184 2184 HOH HOH A . H 5 HOH 185 2185 2185 HOH HOH A . H 5 HOH 186 2186 2186 HOH HOH A . H 5 HOH 187 2187 2187 HOH HOH A . H 5 HOH 188 2188 2188 HOH HOH A . H 5 HOH 189 2189 2189 HOH HOH A . H 5 HOH 190 2190 2190 HOH HOH A . H 5 HOH 191 2191 2191 HOH HOH A . H 5 HOH 192 2192 2192 HOH HOH A . H 5 HOH 193 2193 2193 HOH HOH A . H 5 HOH 194 2194 2194 HOH HOH A . H 5 HOH 195 2195 2195 HOH HOH A . H 5 HOH 196 2196 2196 HOH HOH A . H 5 HOH 197 2197 2197 HOH HOH A . H 5 HOH 198 2198 2198 HOH HOH A . H 5 HOH 199 2199 2199 HOH HOH A . H 5 HOH 200 2200 2200 HOH HOH A . H 5 HOH 201 2201 2201 HOH HOH A . H 5 HOH 202 2202 2202 HOH HOH A . H 5 HOH 203 2203 2203 HOH HOH A . H 5 HOH 204 2204 2204 HOH HOH A . H 5 HOH 205 2205 2205 HOH HOH A . H 5 HOH 206 2206 2206 HOH HOH A . H 5 HOH 207 2207 2207 HOH HOH A . H 5 HOH 208 2208 2208 HOH HOH A . H 5 HOH 209 2209 2209 HOH HOH A . H 5 HOH 210 2210 2210 HOH HOH A . H 5 HOH 211 2211 2211 HOH HOH A . H 5 HOH 212 2212 2212 HOH HOH A . H 5 HOH 213 2213 2213 HOH HOH A . H 5 HOH 214 2214 2214 HOH HOH A . H 5 HOH 215 2215 2215 HOH HOH A . H 5 HOH 216 2216 2216 HOH HOH A . H 5 HOH 217 2217 2217 HOH HOH A . H 5 HOH 218 2218 2218 HOH HOH A . H 5 HOH 219 2219 2219 HOH HOH A . H 5 HOH 220 2220 2220 HOH HOH A . H 5 HOH 221 2221 2221 HOH HOH A . H 5 HOH 222 2222 2222 HOH HOH A . H 5 HOH 223 2223 2223 HOH HOH A . H 5 HOH 224 2224 2224 HOH HOH A . H 5 HOH 225 2225 2225 HOH HOH A . H 5 HOH 226 2226 2226 HOH HOH A . H 5 HOH 227 2227 2227 HOH HOH A . H 5 HOH 228 2228 2228 HOH HOH A . H 5 HOH 229 2229 2229 HOH HOH A . H 5 HOH 230 2230 2230 HOH HOH A . H 5 HOH 231 2231 2231 HOH HOH A . H 5 HOH 232 2232 2232 HOH HOH A . H 5 HOH 233 2233 2233 HOH HOH A . H 5 HOH 234 2234 2234 HOH HOH A . H 5 HOH 235 2235 2235 HOH HOH A . H 5 HOH 236 2236 2236 HOH HOH A . H 5 HOH 237 2237 2237 HOH HOH A . # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A ARG 68 ? CG ? A ARG 27 CG 2 1 Y 1 A ARG 68 ? CD ? A ARG 27 CD 3 1 Y 1 A ARG 68 ? NE ? A ARG 27 NE 4 1 Y 1 A ARG 68 ? CZ ? A ARG 27 CZ 5 1 Y 1 A ARG 68 ? NH1 ? A ARG 27 NH1 6 1 Y 1 A ARG 68 ? NH2 ? A ARG 27 NH2 7 1 Y 1 A LYS 141 ? CE ? A LYS 100 CE 8 1 Y 1 A LYS 141 ? NZ ? A LYS 100 NZ # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0109 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 # _cell.entry_id 4A9L _cell.length_a 37.594 _cell.length_b 42.899 _cell.length_c 79.410 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4A9L _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # _exptl.entry_id 4A9L _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.12 _exptl_crystal.density_percent_sol 41.99 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '20-30% PEG 3350, 0.2 M NACL, 0.1 HEPES PH 8.5, 10% ETHYLGLYCOL.' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RIGAKU SATURN A200' _diffrn_detector.pdbx_collection_date 2010-09-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54178 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E+ SUPERBRIGHT' _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? _diffrn_source.pdbx_wavelength 1.54178 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4A9L _reflns.observed_criterion_sigma_I . _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 23.03 _reflns.d_resolution_high 1.60 _reflns.number_obs 16542 _reflns.number_all ? _reflns.percent_possible_obs 94.1 _reflns.pdbx_Rmerge_I_obs 0.04 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.60 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.4 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.69 _reflns_shell.percent_possible_all 67.2 _reflns_shell.Rmerge_I_obs 0.31 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.20 _reflns_shell.pdbx_redundancy 2.2 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4A9L _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 15665 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 23.03 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 100.00 _refine.ls_R_factor_obs 0.17931 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17801 _refine.ls_R_factor_R_free 0.20600 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 834 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.962 _refine.correlation_coeff_Fo_to_Fc_free 0.955 _refine.B_iso_mean 25.575 _refine.aniso_B[1][1] 1.81 _refine.aniso_B[2][2] -0.89 _refine.aniso_B[3][3] -0.92 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.105 _refine.pdbx_overall_ESU_R_Free 0.098 _refine.overall_SU_ML 0.071 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 4.321 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1044 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 42 _refine_hist.number_atoms_solvent 237 _refine_hist.number_atoms_total 1323 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 23.03 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.007 0.022 ? 1142 'X-RAY DIFFRACTION' ? r_bond_other_d 0.001 0.020 ? 777 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.126 1.988 ? 1560 'X-RAY DIFFRACTION' ? r_angle_other_deg 0.827 3.000 ? 1922 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.004 5.000 ? 135 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 38.734 26.296 ? 54 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.458 15.000 ? 197 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 7.870 15.000 ? 2 'X-RAY DIFFRACTION' ? r_chiral_restr 0.069 0.200 ? 166 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.021 ? 1229 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.001 0.020 ? 199 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.623 2.000 ? 660 'X-RAY DIFFRACTION' ? r_mcbond_other 0.084 2.000 ? 246 'X-RAY DIFFRACTION' ? r_mcangle_it 1.245 4.000 ? 1081 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.701 4.000 ? 482 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 2.599 6.000 ? 474 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.600 _refine_ls_shell.d_res_low 1.641 _refine_ls_shell.number_reflns_R_work 697 _refine_ls_shell.R_factor_R_work 0.287 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.381 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 31 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _database_PDB_matrix.entry_id 4A9L _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4A9L _struct.title 'N-TERMINAL BROMODOMAIN OF HUMAN BRD4 WITH 1,3-DIMETHYL-6-(MORPHOLINE- 4-SULFONYL)-1,2,3,4-TETRAHYDROQUINAZOLIN-2-ONE' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4A9L _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'INHIBITOR, HISTONE, EPIGENETIC READER, SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 4 ? G N N 4 ? H N N 5 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BRD4_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession O60885 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4A9L _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 127 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O60885 _struct_ref_seq.db_align_beg 44 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 168 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 44 _struct_ref_seq.pdbx_auth_seq_align_end 168 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4A9L SER A 1 ? UNP O60885 ? ? 'expression tag' 42 1 1 4A9L MET A 2 ? UNP O60885 ? ? 'expression tag' 43 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 19 ? VAL A 28 ? THR A 60 VAL A 69 1 ? 10 HELX_P HELX_P2 2 VAL A 28 ? LYS A 35 ? VAL A 69 LYS A 76 1 ? 8 HELX_P HELX_P3 3 ALA A 39 ? GLN A 43 ? ALA A 80 GLN A 84 5 ? 5 HELX_P HELX_P4 4 ASP A 55 ? ILE A 60 ? ASP A 96 ILE A 101 1 ? 6 HELX_P HELX_P5 5 ASP A 65 ? ASN A 75 ? ASP A 106 ASN A 116 1 ? 11 HELX_P HELX_P6 6 ASN A 80 ? ASN A 99 ? ASN A 121 ASN A 140 1 ? 20 HELX_P HELX_P7 7 ASP A 103 ? ASN A 121 ? ASP A 144 ASN A 162 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A EDO 1168 ? 6 'BINDING SITE FOR RESIDUE EDO A 1168' AC2 Software A EDO 1169 ? 5 'BINDING SITE FOR RESIDUE EDO A 1169' AC3 Software A EDO 1170 ? 2 'BINDING SITE FOR RESIDUE EDO A 1170' AC4 Software A P9L 1171 ? 11 'BINDING SITE FOR RESIDUE P9L A 1171' AC5 Software A NO3 1172 ? 5 'BINDING SITE FOR RESIDUE NO3 A 1172' AC6 Software A NO3 1173 ? 6 'BINDING SITE FOR RESIDUE NO3 A 1173' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 ILE A 59 ? ILE A 100 . ? 1_555 ? 2 AC1 6 ILE A 60 ? ILE A 101 . ? 1_555 ? 3 AC1 6 LYS A 61 ? LYS A 102 . ? 1_555 ? 4 AC1 6 THR A 62 ? THR A 103 . ? 1_555 ? 5 AC1 6 ASN A 94 ? ASN A 135 . ? 1_555 ? 6 AC1 6 HOH H . ? HOH A 2235 . ? 1_555 ? 7 AC2 5 TRP A 40 ? TRP A 81 . ? 1_555 ? 8 AC2 5 GLN A 44 ? GLN A 85 . ? 1_555 ? 9 AC2 5 ASP A 55 ? ASP A 96 . ? 4_575 ? 10 AC2 5 HOH H . ? HOH A 2117 . ? 1_555 ? 11 AC2 5 HOH H . ? HOH A 2126 . ? 4_575 ? 12 AC3 2 LEU A 26 ? LEU A 67 . ? 1_555 ? 13 AC3 2 GLU A 74 ? GLU A 115 . ? 1_555 ? 14 AC4 11 TRP A 40 ? TRP A 81 . ? 1_555 ? 15 AC4 11 PRO A 41 ? PRO A 82 . ? 1_555 ? 16 AC4 11 PHE A 42 ? PHE A 83 . ? 1_555 ? 17 AC4 11 LEU A 53 ? LEU A 94 . ? 1_555 ? 18 AC4 11 LYS A 58 ? LYS A 99 . ? 4_575 ? 19 AC4 11 TYR A 98 ? TYR A 139 . ? 1_555 ? 20 AC4 11 ASN A 99 ? ASN A 140 . ? 1_555 ? 21 AC4 11 ILE A 105 ? ILE A 146 . ? 1_555 ? 22 AC4 11 MET A 108 ? MET A 149 . ? 1_555 ? 23 AC4 11 HOH H . ? HOH A 2130 . ? 1_555 ? 24 AC4 11 HOH H . ? HOH A 2237 . ? 1_555 ? 25 AC5 5 LYS A 16 ? LYS A 57 . ? 2_674 ? 26 AC5 5 ASN A 75 ? ASN A 116 . ? 2_674 ? 27 AC5 5 ASN A 76 ? ASN A 117 . ? 2_674 ? 28 AC5 5 ASP A 104 ? ASP A 145 . ? 1_555 ? 29 AC5 5 HOH H . ? HOH A 2160 . ? 2_674 ? 30 AC6 6 THR A 19 ? THR A 60 . ? 1_555 ? 31 AC6 6 GLN A 21 ? GLN A 62 . ? 1_555 ? 32 AC6 6 ASN A 80 ? ASN A 121 . ? 1_555 ? 33 AC6 6 ALA A 81 ? ALA A 122 . ? 1_555 ? 34 AC6 6 GLU A 126 ? GLU A 167 . ? 1_555 ? 35 AC6 6 HOH H . ? HOH A 2165 . ? 1_555 ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 52 ? ? -164.12 100.52 2 1 ASN A 162 ? ? -63.39 2.01 # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 25.8733 _pdbx_refine_tls.origin_y 39.5673 _pdbx_refine_tls.origin_z 9.4001 _pdbx_refine_tls.T[1][1] 0.0257 _pdbx_refine_tls.T[2][2] 0.0261 _pdbx_refine_tls.T[3][3] 0.0353 _pdbx_refine_tls.T[1][2] 0.0062 _pdbx_refine_tls.T[1][3] 0.0154 _pdbx_refine_tls.T[2][3] -0.0023 _pdbx_refine_tls.L[1][1] 0.7121 _pdbx_refine_tls.L[2][2] 0.9108 _pdbx_refine_tls.L[3][3] 1.9821 _pdbx_refine_tls.L[1][2] 0.3339 _pdbx_refine_tls.L[1][3] -0.4269 _pdbx_refine_tls.L[2][3] -0.5674 _pdbx_refine_tls.S[1][1] -0.0966 _pdbx_refine_tls.S[1][2] 0.0067 _pdbx_refine_tls.S[1][3] -0.0605 _pdbx_refine_tls.S[2][1] -0.0180 _pdbx_refine_tls.S[2][2] -0.0148 _pdbx_refine_tls.S[2][3] -0.0881 _pdbx_refine_tls.S[3][1] 0.1649 _pdbx_refine_tls.S[3][2] 0.0629 _pdbx_refine_tls.S[3][3] 0.1114 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 42 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 167 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _pdbx_distant_solvent_atoms.id _pdbx_distant_solvent_atoms.PDB_model_num _pdbx_distant_solvent_atoms.auth_atom_id _pdbx_distant_solvent_atoms.label_alt_id _pdbx_distant_solvent_atoms.auth_asym_id _pdbx_distant_solvent_atoms.auth_comp_id _pdbx_distant_solvent_atoms.auth_seq_id _pdbx_distant_solvent_atoms.PDB_ins_code _pdbx_distant_solvent_atoms.neighbor_macromolecule_distance _pdbx_distant_solvent_atoms.neighbor_ligand_distance 1 1 O ? A HOH 2070 ? 5.86 . 2 1 O ? A HOH 2091 ? 6.03 . 3 1 O ? A HOH 2114 ? 7.54 . # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLU _pdbx_unobs_or_zero_occ_residues.auth_seq_id 168 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id GLU _pdbx_unobs_or_zero_occ_residues.label_seq_id 127 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 EDO C1 C N N 88 EDO O1 O N N 89 EDO C2 C N N 90 EDO O2 O N N 91 EDO H11 H N N 92 EDO H12 H N N 93 EDO HO1 H N N 94 EDO H21 H N N 95 EDO H22 H N N 96 EDO HO2 H N N 97 GLN N N N N 98 GLN CA C N S 99 GLN C C N N 100 GLN O O N N 101 GLN CB C N N 102 GLN CG C N N 103 GLN CD C N N 104 GLN OE1 O N N 105 GLN NE2 N N N 106 GLN OXT O N N 107 GLN H H N N 108 GLN H2 H N N 109 GLN HA H N N 110 GLN HB2 H N N 111 GLN HB3 H N N 112 GLN HG2 H N N 113 GLN HG3 H N N 114 GLN HE21 H N N 115 GLN HE22 H N N 116 GLN HXT H N N 117 GLU N N N N 118 GLU CA C N S 119 GLU C C N N 120 GLU O O N N 121 GLU CB C N N 122 GLU CG C N N 123 GLU CD C N N 124 GLU OE1 O N N 125 GLU OE2 O N N 126 GLU OXT O N N 127 GLU H H N N 128 GLU H2 H N N 129 GLU HA H N N 130 GLU HB2 H N N 131 GLU HB3 H N N 132 GLU HG2 H N N 133 GLU HG3 H N N 134 GLU HE2 H N N 135 GLU HXT H N N 136 GLY N N N N 137 GLY CA C N N 138 GLY C C N N 139 GLY O O N N 140 GLY OXT O N N 141 GLY H H N N 142 GLY H2 H N N 143 GLY HA2 H N N 144 GLY HA3 H N N 145 GLY HXT H N N 146 HIS N N N N 147 HIS CA C N S 148 HIS C C N N 149 HIS O O N N 150 HIS CB C N N 151 HIS CG C Y N 152 HIS ND1 N Y N 153 HIS CD2 C Y N 154 HIS CE1 C Y N 155 HIS NE2 N Y N 156 HIS OXT O N N 157 HIS H H N N 158 HIS H2 H N N 159 HIS HA H N N 160 HIS HB2 H N N 161 HIS HB3 H N N 162 HIS HD1 H N N 163 HIS HD2 H N N 164 HIS HE1 H N N 165 HIS HE2 H N N 166 HIS HXT H N N 167 HOH O O N N 168 HOH H1 H N N 169 HOH H2 H N N 170 ILE N N N N 171 ILE CA C N S 172 ILE C C N N 173 ILE O O N N 174 ILE CB C N S 175 ILE CG1 C N N 176 ILE CG2 C N N 177 ILE CD1 C N N 178 ILE OXT O N N 179 ILE H H N N 180 ILE H2 H N N 181 ILE HA H N N 182 ILE HB H N N 183 ILE HG12 H N N 184 ILE HG13 H N N 185 ILE HG21 H N N 186 ILE HG22 H N N 187 ILE HG23 H N N 188 ILE HD11 H N N 189 ILE HD12 H N N 190 ILE HD13 H N N 191 ILE HXT H N N 192 LEU N N N N 193 LEU CA C N S 194 LEU C C N N 195 LEU O O N N 196 LEU CB C N N 197 LEU CG C N N 198 LEU CD1 C N N 199 LEU CD2 C N N 200 LEU OXT O N N 201 LEU H H N N 202 LEU H2 H N N 203 LEU HA H N N 204 LEU HB2 H N N 205 LEU HB3 H N N 206 LEU HG H N N 207 LEU HD11 H N N 208 LEU HD12 H N N 209 LEU HD13 H N N 210 LEU HD21 H N N 211 LEU HD22 H N N 212 LEU HD23 H N N 213 LEU HXT H N N 214 LYS N N N N 215 LYS CA C N S 216 LYS C C N N 217 LYS O O N N 218 LYS CB C N N 219 LYS CG C N N 220 LYS CD C N N 221 LYS CE C N N 222 LYS NZ N N N 223 LYS OXT O N N 224 LYS H H N N 225 LYS H2 H N N 226 LYS HA H N N 227 LYS HB2 H N N 228 LYS HB3 H N N 229 LYS HG2 H N N 230 LYS HG3 H N N 231 LYS HD2 H N N 232 LYS HD3 H N N 233 LYS HE2 H N N 234 LYS HE3 H N N 235 LYS HZ1 H N N 236 LYS HZ2 H N N 237 LYS HZ3 H N N 238 LYS HXT H N N 239 MET N N N N 240 MET CA C N S 241 MET C C N N 242 MET O O N N 243 MET CB C N N 244 MET CG C N N 245 MET SD S N N 246 MET CE C N N 247 MET OXT O N N 248 MET H H N N 249 MET H2 H N N 250 MET HA H N N 251 MET HB2 H N N 252 MET HB3 H N N 253 MET HG2 H N N 254 MET HG3 H N N 255 MET HE1 H N N 256 MET HE2 H N N 257 MET HE3 H N N 258 MET HXT H N N 259 NO3 N N N N 260 NO3 O1 O N N 261 NO3 O2 O N N 262 NO3 O3 O N N 263 P9L O3 O N N 264 P9L S S N N 265 P9L O2 O N N 266 P9L N3 N N N 267 P9L C14 C N N 268 P9L C13 C N N 269 P9L O4 O N N 270 P9L C12 C N N 271 P9L C11 C N N 272 P9L C5 C Y N 273 P9L C4 C Y N 274 P9L C6 C Y N 275 P9L C7 C Y N 276 P9L C8 C Y N 277 P9L C3 C Y N 278 P9L C2 C N N 279 P9L N2 N N N 280 P9L C9 C N N 281 P9L C10 C N N 282 P9L O1 O N N 283 P9L N1 N N N 284 P9L C1 C N N 285 P9L H141 H N N 286 P9L H142 H N N 287 P9L H111 H N N 288 P9L H112 H N N 289 P9L H131 H N N 290 P9L H132 H N N 291 P9L H121 H N N 292 P9L H122 H N N 293 P9L H4 H N N 294 P9L H6 H N N 295 P9L H7 H N N 296 P9L H21C H N N 297 P9L H22C H N N 298 P9L H91C H N N 299 P9L H92C H N N 300 P9L H93C H N N 301 P9L H11C H N N 302 P9L H12C H N N 303 P9L H13C H N N 304 PHE N N N N 305 PHE CA C N S 306 PHE C C N N 307 PHE O O N N 308 PHE CB C N N 309 PHE CG C Y N 310 PHE CD1 C Y N 311 PHE CD2 C Y N 312 PHE CE1 C Y N 313 PHE CE2 C Y N 314 PHE CZ C Y N 315 PHE OXT O N N 316 PHE H H N N 317 PHE H2 H N N 318 PHE HA H N N 319 PHE HB2 H N N 320 PHE HB3 H N N 321 PHE HD1 H N N 322 PHE HD2 H N N 323 PHE HE1 H N N 324 PHE HE2 H N N 325 PHE HZ H N N 326 PHE HXT H N N 327 PRO N N N N 328 PRO CA C N S 329 PRO C C N N 330 PRO O O N N 331 PRO CB C N N 332 PRO CG C N N 333 PRO CD C N N 334 PRO OXT O N N 335 PRO H H N N 336 PRO HA H N N 337 PRO HB2 H N N 338 PRO HB3 H N N 339 PRO HG2 H N N 340 PRO HG3 H N N 341 PRO HD2 H N N 342 PRO HD3 H N N 343 PRO HXT H N N 344 SER N N N N 345 SER CA C N S 346 SER C C N N 347 SER O O N N 348 SER CB C N N 349 SER OG O N N 350 SER OXT O N N 351 SER H H N N 352 SER H2 H N N 353 SER HA H N N 354 SER HB2 H N N 355 SER HB3 H N N 356 SER HG H N N 357 SER HXT H N N 358 THR N N N N 359 THR CA C N S 360 THR C C N N 361 THR O O N N 362 THR CB C N R 363 THR OG1 O N N 364 THR CG2 C N N 365 THR OXT O N N 366 THR H H N N 367 THR H2 H N N 368 THR HA H N N 369 THR HB H N N 370 THR HG1 H N N 371 THR HG21 H N N 372 THR HG22 H N N 373 THR HG23 H N N 374 THR HXT H N N 375 TRP N N N N 376 TRP CA C N S 377 TRP C C N N 378 TRP O O N N 379 TRP CB C N N 380 TRP CG C Y N 381 TRP CD1 C Y N 382 TRP CD2 C Y N 383 TRP NE1 N Y N 384 TRP CE2 C Y N 385 TRP CE3 C Y N 386 TRP CZ2 C Y N 387 TRP CZ3 C Y N 388 TRP CH2 C Y N 389 TRP OXT O N N 390 TRP H H N N 391 TRP H2 H N N 392 TRP HA H N N 393 TRP HB2 H N N 394 TRP HB3 H N N 395 TRP HD1 H N N 396 TRP HE1 H N N 397 TRP HE3 H N N 398 TRP HZ2 H N N 399 TRP HZ3 H N N 400 TRP HH2 H N N 401 TRP HXT H N N 402 TYR N N N N 403 TYR CA C N S 404 TYR C C N N 405 TYR O O N N 406 TYR CB C N N 407 TYR CG C Y N 408 TYR CD1 C Y N 409 TYR CD2 C Y N 410 TYR CE1 C Y N 411 TYR CE2 C Y N 412 TYR CZ C Y N 413 TYR OH O N N 414 TYR OXT O N N 415 TYR H H N N 416 TYR H2 H N N 417 TYR HA H N N 418 TYR HB2 H N N 419 TYR HB3 H N N 420 TYR HD1 H N N 421 TYR HD2 H N N 422 TYR HE1 H N N 423 TYR HE2 H N N 424 TYR HH H N N 425 TYR HXT H N N 426 VAL N N N N 427 VAL CA C N S 428 VAL C C N N 429 VAL O O N N 430 VAL CB C N N 431 VAL CG1 C N N 432 VAL CG2 C N N 433 VAL OXT O N N 434 VAL H H N N 435 VAL H2 H N N 436 VAL HA H N N 437 VAL HB H N N 438 VAL HG11 H N N 439 VAL HG12 H N N 440 VAL HG13 H N N 441 VAL HG21 H N N 442 VAL HG22 H N N 443 VAL HG23 H N N 444 VAL HXT H N N 445 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 EDO C1 O1 sing N N 83 EDO C1 C2 sing N N 84 EDO C1 H11 sing N N 85 EDO C1 H12 sing N N 86 EDO O1 HO1 sing N N 87 EDO C2 O2 sing N N 88 EDO C2 H21 sing N N 89 EDO C2 H22 sing N N 90 EDO O2 HO2 sing N N 91 GLN N CA sing N N 92 GLN N H sing N N 93 GLN N H2 sing N N 94 GLN CA C sing N N 95 GLN CA CB sing N N 96 GLN CA HA sing N N 97 GLN C O doub N N 98 GLN C OXT sing N N 99 GLN CB CG sing N N 100 GLN CB HB2 sing N N 101 GLN CB HB3 sing N N 102 GLN CG CD sing N N 103 GLN CG HG2 sing N N 104 GLN CG HG3 sing N N 105 GLN CD OE1 doub N N 106 GLN CD NE2 sing N N 107 GLN NE2 HE21 sing N N 108 GLN NE2 HE22 sing N N 109 GLN OXT HXT sing N N 110 GLU N CA sing N N 111 GLU N H sing N N 112 GLU N H2 sing N N 113 GLU CA C sing N N 114 GLU CA CB sing N N 115 GLU CA HA sing N N 116 GLU C O doub N N 117 GLU C OXT sing N N 118 GLU CB CG sing N N 119 GLU CB HB2 sing N N 120 GLU CB HB3 sing N N 121 GLU CG CD sing N N 122 GLU CG HG2 sing N N 123 GLU CG HG3 sing N N 124 GLU CD OE1 doub N N 125 GLU CD OE2 sing N N 126 GLU OE2 HE2 sing N N 127 GLU OXT HXT sing N N 128 GLY N CA sing N N 129 GLY N H sing N N 130 GLY N H2 sing N N 131 GLY CA C sing N N 132 GLY CA HA2 sing N N 133 GLY CA HA3 sing N N 134 GLY C O doub N N 135 GLY C OXT sing N N 136 GLY OXT HXT sing N N 137 HIS N CA sing N N 138 HIS N H sing N N 139 HIS N H2 sing N N 140 HIS CA C sing N N 141 HIS CA CB sing N N 142 HIS CA HA sing N N 143 HIS C O doub N N 144 HIS C OXT sing N N 145 HIS CB CG sing N N 146 HIS CB HB2 sing N N 147 HIS CB HB3 sing N N 148 HIS CG ND1 sing Y N 149 HIS CG CD2 doub Y N 150 HIS ND1 CE1 doub Y N 151 HIS ND1 HD1 sing N N 152 HIS CD2 NE2 sing Y N 153 HIS CD2 HD2 sing N N 154 HIS CE1 NE2 sing Y N 155 HIS CE1 HE1 sing N N 156 HIS NE2 HE2 sing N N 157 HIS OXT HXT sing N N 158 HOH O H1 sing N N 159 HOH O H2 sing N N 160 ILE N CA sing N N 161 ILE N H sing N N 162 ILE N H2 sing N N 163 ILE CA C sing N N 164 ILE CA CB sing N N 165 ILE CA HA sing N N 166 ILE C O doub N N 167 ILE C OXT sing N N 168 ILE CB CG1 sing N N 169 ILE CB CG2 sing N N 170 ILE CB HB sing N N 171 ILE CG1 CD1 sing N N 172 ILE CG1 HG12 sing N N 173 ILE CG1 HG13 sing N N 174 ILE CG2 HG21 sing N N 175 ILE CG2 HG22 sing N N 176 ILE CG2 HG23 sing N N 177 ILE CD1 HD11 sing N N 178 ILE CD1 HD12 sing N N 179 ILE CD1 HD13 sing N N 180 ILE OXT HXT sing N N 181 LEU N CA sing N N 182 LEU N H sing N N 183 LEU N H2 sing N N 184 LEU CA C sing N N 185 LEU CA CB sing N N 186 LEU CA HA sing N N 187 LEU C O doub N N 188 LEU C OXT sing N N 189 LEU CB CG sing N N 190 LEU CB HB2 sing N N 191 LEU CB HB3 sing N N 192 LEU CG CD1 sing N N 193 LEU CG CD2 sing N N 194 LEU CG HG sing N N 195 LEU CD1 HD11 sing N N 196 LEU CD1 HD12 sing N N 197 LEU CD1 HD13 sing N N 198 LEU CD2 HD21 sing N N 199 LEU CD2 HD22 sing N N 200 LEU CD2 HD23 sing N N 201 LEU OXT HXT sing N N 202 LYS N CA sing N N 203 LYS N H sing N N 204 LYS N H2 sing N N 205 LYS CA C sing N N 206 LYS CA CB sing N N 207 LYS CA HA sing N N 208 LYS C O doub N N 209 LYS C OXT sing N N 210 LYS CB CG sing N N 211 LYS CB HB2 sing N N 212 LYS CB HB3 sing N N 213 LYS CG CD sing N N 214 LYS CG HG2 sing N N 215 LYS CG HG3 sing N N 216 LYS CD CE sing N N 217 LYS CD HD2 sing N N 218 LYS CD HD3 sing N N 219 LYS CE NZ sing N N 220 LYS CE HE2 sing N N 221 LYS CE HE3 sing N N 222 LYS NZ HZ1 sing N N 223 LYS NZ HZ2 sing N N 224 LYS NZ HZ3 sing N N 225 LYS OXT HXT sing N N 226 MET N CA sing N N 227 MET N H sing N N 228 MET N H2 sing N N 229 MET CA C sing N N 230 MET CA CB sing N N 231 MET CA HA sing N N 232 MET C O doub N N 233 MET C OXT sing N N 234 MET CB CG sing N N 235 MET CB HB2 sing N N 236 MET CB HB3 sing N N 237 MET CG SD sing N N 238 MET CG HG2 sing N N 239 MET CG HG3 sing N N 240 MET SD CE sing N N 241 MET CE HE1 sing N N 242 MET CE HE2 sing N N 243 MET CE HE3 sing N N 244 MET OXT HXT sing N N 245 NO3 N O1 doub N N 246 NO3 N O2 sing N N 247 NO3 N O3 sing N N 248 P9L O3 S doub N N 249 P9L S O2 doub N N 250 P9L S N3 sing N N 251 P9L S C5 sing N N 252 P9L N3 C14 sing N N 253 P9L N3 C11 sing N N 254 P9L C14 C13 sing N N 255 P9L C13 O4 sing N N 256 P9L O4 C12 sing N N 257 P9L C12 C11 sing N N 258 P9L C5 C4 sing Y N 259 P9L C5 C6 doub Y N 260 P9L C4 C3 doub Y N 261 P9L C6 C7 sing Y N 262 P9L C7 C8 doub Y N 263 P9L C8 C3 sing Y N 264 P9L C8 N2 sing N N 265 P9L C3 C2 sing N N 266 P9L C2 N1 sing N N 267 P9L N2 C9 sing N N 268 P9L N2 C10 sing N N 269 P9L C10 O1 doub N N 270 P9L C10 N1 sing N N 271 P9L N1 C1 sing N N 272 P9L C14 H141 sing N N 273 P9L C14 H142 sing N N 274 P9L C11 H111 sing N N 275 P9L C11 H112 sing N N 276 P9L C13 H131 sing N N 277 P9L C13 H132 sing N N 278 P9L C12 H121 sing N N 279 P9L C12 H122 sing N N 280 P9L C4 H4 sing N N 281 P9L C6 H6 sing N N 282 P9L C7 H7 sing N N 283 P9L C2 H21C sing N N 284 P9L C2 H22C sing N N 285 P9L C9 H91C sing N N 286 P9L C9 H92C sing N N 287 P9L C9 H93C sing N N 288 P9L C1 H11C sing N N 289 P9L C1 H12C sing N N 290 P9L C1 H13C sing N N 291 PHE N CA sing N N 292 PHE N H sing N N 293 PHE N H2 sing N N 294 PHE CA C sing N N 295 PHE CA CB sing N N 296 PHE CA HA sing N N 297 PHE C O doub N N 298 PHE C OXT sing N N 299 PHE CB CG sing N N 300 PHE CB HB2 sing N N 301 PHE CB HB3 sing N N 302 PHE CG CD1 doub Y N 303 PHE CG CD2 sing Y N 304 PHE CD1 CE1 sing Y N 305 PHE CD1 HD1 sing N N 306 PHE CD2 CE2 doub Y N 307 PHE CD2 HD2 sing N N 308 PHE CE1 CZ doub Y N 309 PHE CE1 HE1 sing N N 310 PHE CE2 CZ sing Y N 311 PHE CE2 HE2 sing N N 312 PHE CZ HZ sing N N 313 PHE OXT HXT sing N N 314 PRO N CA sing N N 315 PRO N CD sing N N 316 PRO N H sing N N 317 PRO CA C sing N N 318 PRO CA CB sing N N 319 PRO CA HA sing N N 320 PRO C O doub N N 321 PRO C OXT sing N N 322 PRO CB CG sing N N 323 PRO CB HB2 sing N N 324 PRO CB HB3 sing N N 325 PRO CG CD sing N N 326 PRO CG HG2 sing N N 327 PRO CG HG3 sing N N 328 PRO CD HD2 sing N N 329 PRO CD HD3 sing N N 330 PRO OXT HXT sing N N 331 SER N CA sing N N 332 SER N H sing N N 333 SER N H2 sing N N 334 SER CA C sing N N 335 SER CA CB sing N N 336 SER CA HA sing N N 337 SER C O doub N N 338 SER C OXT sing N N 339 SER CB OG sing N N 340 SER CB HB2 sing N N 341 SER CB HB3 sing N N 342 SER OG HG sing N N 343 SER OXT HXT sing N N 344 THR N CA sing N N 345 THR N H sing N N 346 THR N H2 sing N N 347 THR CA C sing N N 348 THR CA CB sing N N 349 THR CA HA sing N N 350 THR C O doub N N 351 THR C OXT sing N N 352 THR CB OG1 sing N N 353 THR CB CG2 sing N N 354 THR CB HB sing N N 355 THR OG1 HG1 sing N N 356 THR CG2 HG21 sing N N 357 THR CG2 HG22 sing N N 358 THR CG2 HG23 sing N N 359 THR OXT HXT sing N N 360 TRP N CA sing N N 361 TRP N H sing N N 362 TRP N H2 sing N N 363 TRP CA C sing N N 364 TRP CA CB sing N N 365 TRP CA HA sing N N 366 TRP C O doub N N 367 TRP C OXT sing N N 368 TRP CB CG sing N N 369 TRP CB HB2 sing N N 370 TRP CB HB3 sing N N 371 TRP CG CD1 doub Y N 372 TRP CG CD2 sing Y N 373 TRP CD1 NE1 sing Y N 374 TRP CD1 HD1 sing N N 375 TRP CD2 CE2 doub Y N 376 TRP CD2 CE3 sing Y N 377 TRP NE1 CE2 sing Y N 378 TRP NE1 HE1 sing N N 379 TRP CE2 CZ2 sing Y N 380 TRP CE3 CZ3 doub Y N 381 TRP CE3 HE3 sing N N 382 TRP CZ2 CH2 doub Y N 383 TRP CZ2 HZ2 sing N N 384 TRP CZ3 CH2 sing Y N 385 TRP CZ3 HZ3 sing N N 386 TRP CH2 HH2 sing N N 387 TRP OXT HXT sing N N 388 TYR N CA sing N N 389 TYR N H sing N N 390 TYR N H2 sing N N 391 TYR CA C sing N N 392 TYR CA CB sing N N 393 TYR CA HA sing N N 394 TYR C O doub N N 395 TYR C OXT sing N N 396 TYR CB CG sing N N 397 TYR CB HB2 sing N N 398 TYR CB HB3 sing N N 399 TYR CG CD1 doub Y N 400 TYR CG CD2 sing Y N 401 TYR CD1 CE1 sing Y N 402 TYR CD1 HD1 sing N N 403 TYR CD2 CE2 doub Y N 404 TYR CD2 HD2 sing N N 405 TYR CE1 CZ doub Y N 406 TYR CE1 HE1 sing N N 407 TYR CE2 CZ sing Y N 408 TYR CE2 HE2 sing N N 409 TYR CZ OH sing N N 410 TYR OH HH sing N N 411 TYR OXT HXT sing N N 412 VAL N CA sing N N 413 VAL N H sing N N 414 VAL N H2 sing N N 415 VAL CA C sing N N 416 VAL CA CB sing N N 417 VAL CA HA sing N N 418 VAL C O doub N N 419 VAL C OXT sing N N 420 VAL CB CG1 sing N N 421 VAL CB CG2 sing N N 422 VAL CB HB sing N N 423 VAL CG1 HG11 sing N N 424 VAL CG1 HG12 sing N N 425 VAL CG1 HG13 sing N N 426 VAL CG2 HG21 sing N N 427 VAL CG2 HG22 sing N N 428 VAL CG2 HG23 sing N N 429 VAL OXT HXT sing N N 430 # _atom_sites.entry_id 4A9L _atom_sites.fract_transf_matrix[1][1] 0.026600 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.023311 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012593 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_