HEADER HYDROLASE 16-JAN-12 4AF1 TITLE ARCHEAL RELEASE FACTOR ARF1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: TRANSLATION TERMINATION FACTOR ARF1, RELEASE FACTOR 1; COMPND 5 EC: 3.6.5.3; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALOBACTERIUM SALINARUM; SOURCE 3 ORGANISM_TAXID: 478009; SOURCE 4 STRAIN: R1; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: CODONPLUS RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET19B KEYWDS HYDROLASE, TRANSLATION EXPDTA X-RAY DIFFRACTION AUTHOR J.L.KARLSEN,M.KJELDGAARD REVDAT 5 23-OCT-24 4AF1 1 REMARK REVDAT 4 20-DEC-23 4AF1 1 REMARK LINK REVDAT 3 08-MAY-19 4AF1 1 REMARK REVDAT 2 09-AUG-17 4AF1 1 REMARK REVDAT 1 20-MAR-13 4AF1 0 JRNL AUTH J.L.KARLSEN,M.KJELDGAARD JRNL TITL ARCHEAL RELEASE FACTOR ARF1 CONTAINS A METAL BINDING DOMAIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : MLHL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 64.16 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 3 NUMBER OF REFLECTIONS : 29073 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.255 REMARK 3 R VALUE (WORKING SET) : 0.254 REMARK 3 FREE R VALUE : 0.279 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1385 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 51.0251 - 4.3136 1.00 2919 154 0.2028 0.2135 REMARK 3 2 4.3136 - 3.4240 1.00 2803 148 0.2035 0.2420 REMARK 3 3 3.4240 - 2.9913 1.00 2790 146 0.2358 0.2482 REMARK 3 4 2.9913 - 2.7178 1.00 2757 145 0.2905 0.3207 REMARK 3 5 2.7178 - 2.5230 1.00 2748 145 0.3135 0.3832 REMARK 3 6 2.5230 - 2.3743 1.00 2760 145 0.3134 0.3777 REMARK 3 7 2.3743 - 2.2553 0.99 2691 142 0.3228 0.3337 REMARK 3 8 2.2553 - 2.1572 0.99 2724 144 0.3316 0.3435 REMARK 3 9 2.1572 - 2.0741 0.95 2635 138 0.3530 0.3825 REMARK 3 10 2.0741 - 2.0026 0.55 1485 78 0.3816 0.3981 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.60 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 46.47 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.300 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 31.520 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.24 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.04270 REMARK 3 B22 (A**2) : 2.19560 REMARK 3 B33 (A**2) : -2.23840 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.27220 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3284 REMARK 3 ANGLE : 1.088 4439 REMARK 3 CHIRALITY : 0.055 480 REMARK 3 PLANARITY : 0.003 596 REMARK 3 DIHEDRAL : 13.559 1236 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID 6:144 REMARK 3 ORIGIN FOR THE GROUP (A): 23.7272 -3.7180 44.3788 REMARK 3 T TENSOR REMARK 3 T11: 0.1374 T22: 0.2977 REMARK 3 T33: 0.0737 T12: 0.0241 REMARK 3 T13: 0.0150 T23: -0.0783 REMARK 3 L TENSOR REMARK 3 L11: 0.1036 L22: 0.2192 REMARK 3 L33: 0.2715 L12: 0.0508 REMARK 3 L13: -0.0705 L23: 0.0867 REMARK 3 S TENSOR REMARK 3 S11: -0.3016 S12: 0.0334 S13: 0.0719 REMARK 3 S21: -0.1345 S22: 0.2625 S23: 0.3388 REMARK 3 S31: -0.2198 S32: 1.0557 S33: -0.0438 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESID 145:279 REMARK 3 ORIGIN FOR THE GROUP (A): 50.9260 -7.0361 12.0916 REMARK 3 T TENSOR REMARK 3 T11: 0.1603 T22: 0.6810 REMARK 3 T33: 0.2071 T12: 0.0703 REMARK 3 T13: 0.0044 T23: -0.0123 REMARK 3 L TENSOR REMARK 3 L11: 0.0633 L22: 0.1810 REMARK 3 L33: 0.0773 L12: 0.0391 REMARK 3 L13: -0.0073 L23: 0.0411 REMARK 3 S TENSOR REMARK 3 S11: 0.4096 S12: 0.1387 S13: 0.2987 REMARK 3 S21: 0.3076 S22: -0.2628 S23: 0.1874 REMARK 3 S31: 0.1244 S32: 0.2407 S33: 0.0014 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESID 280:500 REMARK 3 ORIGIN FOR THE GROUP (A): 9.4273 -21.3147 22.0064 REMARK 3 T TENSOR REMARK 3 T11: 0.2478 T22: 0.0304 REMARK 3 T33: 0.1207 T12: -0.0394 REMARK 3 T13: -0.0719 T23: -0.0375 REMARK 3 L TENSOR REMARK 3 L11: 0.3417 L22: 0.3241 REMARK 3 L33: 0.5042 L12: -0.0417 REMARK 3 L13: 0.0850 L23: 0.1969 REMARK 3 S TENSOR REMARK 3 S11: 0.5609 S12: -0.1440 S13: 0.0116 REMARK 3 S21: 0.2855 S22: -0.3372 S23: -0.6573 REMARK 3 S31: 0.6933 S32: -0.4804 S33: 0.1746 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4AF1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1290049908. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JUN-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9756 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, UCLA MBI DIFFRACTION REMARK 200 ANISOTROPY SERVER REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29222 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 64.160 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 48.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.50 REMARK 200 R MERGE FOR SHELL (I) : 1.23000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1DT9 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.80 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.27 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: VAPOR DIFFUSION IN SITTING DROPS WITH REMARK 280 RESERVOIR CONTAINING 1.8-2.2 M NA MALONATE (PH 8), 50 MM MES PH REMARK 280 6.5, 7 MM 2-MERCAPTOETHANOL., VAPOR DIFFUSION, SITTING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 65.51000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 15.99500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 65.51000 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 15.99500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLU A 3 REMARK 465 GLN A 4 REMARK 465 ASP A 5 REMARK 465 GLU A 6 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 197 CG CD1 CD2 REMARK 470 PRO A 217 CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PHE A 237 O HOH A 2118 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2037 O HOH A 2085 4556 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 217 N - CA - CB ANGL. DEV. = 7.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 86 -147.67 -81.32 REMARK 500 PRO A 90 -173.84 -60.76 REMARK 500 SER A 103 -135.54 -89.30 REMARK 500 SER A 117 78.05 58.99 REMARK 500 ASP A 154 -155.14 -127.57 REMARK 500 PRO A 179 154.18 -47.61 REMARK 500 LYS A 181 -87.07 43.45 REMARK 500 GLN A 182 -142.29 19.39 REMARK 500 ALA A 193 -76.16 -36.90 REMARK 500 ARG A 219 -92.25 -47.79 REMARK 500 SER A 231 -168.66 58.66 REMARK 500 HIS A 244 121.56 67.00 REMARK 500 ASP A 261 -165.68 -73.89 REMARK 500 ARG A 327 48.08 -140.59 REMARK 500 ASP A 338 46.29 70.86 REMARK 500 ASP A 358 -17.70 92.31 REMARK 500 CYS A 359 -28.41 -153.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 500 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 335 SG REMARK 620 2 HIS A 339 NE2 125.0 REMARK 620 3 CYS A 356 SG 63.5 119.9 REMARK 620 4 CYS A 359 SG 106.9 117.8 112.1 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 500 DBREF 4AF1 A 1 416 UNP Q9HNF0 RF1_HALSA 1 416 SEQRES 1 A 416 MET SER GLU GLN ASP GLU VAL PRO SER GLU ASP ARG ARG SEQRES 2 A 416 LYS TYR GLU PHE ARG LYS VAL ILE GLU GLU LEU LYS ASP SEQRES 3 A 416 TYR GLU GLY SER GLY THR GLN LEU VAL THR ILE TYR ILE SEQRES 4 A 416 PRO PRO ASP LYS GLN ILE SER ASP VAL VAL ALA HIS VAL SEQRES 5 A 416 THR GLN GLU HIS SER GLU ALA SER ASN ILE LYS SER LYS SEQRES 6 A 416 GLN THR ARG THR ASN VAL GLN ASP ALA LEU THR SER ILE SEQRES 7 A 416 LYS ASP ARG LEU ARG TYR TYR ASP THR PHE PRO PRO ASP SEQRES 8 A 416 ASN GLY MET VAL VAL PHE SER GLY ALA VAL ASP SER GLY SEQRES 9 A 416 GLY GLY ARG THR ASP MET VAL THR GLU VAL LEU GLU SER SEQRES 10 A 416 PRO PRO GLN PRO ILE GLU SER PHE ARG TYR HIS CYS ASP SEQRES 11 A 416 SER ALA PHE LEU THR GLU PRO LEU ALA GLU MET LEU GLY SEQRES 12 A 416 ASP LYS GLY LEU TYR GLY LEU ILE VAL LEU ASP ARG ARG SEQRES 13 A 416 GLU SER ASN VAL GLY TRP LEU LYS GLY LYS ARG VAL GLN SEQRES 14 A 416 PRO VAL LYS SER ALA GLU SER LEU VAL PRO GLY LYS GLN SEQRES 15 A 416 ARG LYS GLY GLY GLN SER ALA GLN ARG PHE ALA ARG LEU SEQRES 16 A 416 ARG LEU GLU ALA ILE ASP ASN PHE TYR GLN GLU VAL ALA SEQRES 17 A 416 GLY MET ALA ASP ASP LEU PHE VAL PRO LYS ARG HIS GLU SEQRES 18 A 416 ILE ASP GLY ILE LEU VAL GLY GLY PRO SER PRO THR LYS SEQRES 19 A 416 ASP GLU PHE LEU ASP GLY ASP TYR LEU HIS HIS GLU LEU SEQRES 20 A 416 GLN ASP LYS VAL LEU GLY LYS PHE ASP VAL SER TYR THR SEQRES 21 A 416 ASP GLU SER GLY LEU SER ASP LEU VAL ASP ALA GLY GLN SEQRES 22 A 416 ALA ALA LEU ALA GLU ALA ASP LEU MET ASP ASP LYS SER SEQRES 23 A 416 ASP MET GLU GLU PHE PHE GLU GLU LEU ASN GLY GLY LYS SEQRES 24 A 416 LEU ALA THR TYR GLY PHE GLU GLN THR ARG ARG ASN LEU SEQRES 25 A 416 ILE MET GLY SER VAL ASP ARG LEU LEU VAL SER GLU ASP SEQRES 26 A 416 LEU ARG GLU ASP VAL VAL ILE TYR GLU CYS PRO ASN ASP SEQRES 27 A 416 HIS GLU GLU TYR GLU THR ILE ASP ARG ARG ASN THR SER SEQRES 28 A 416 PRO GLU HIS THR CYS SER ASP CYS GLY GLU GLU ALA THR SEQRES 29 A 416 GLU VAL ASP ARG GLU ASP ALA ILE ASP HIS LEU MET SER SEQRES 30 A 416 ILE ALA ASP GLN ARG GLY THR GLU THR HIS PHE ILE SER SEQRES 31 A 416 THR ASP PHE GLU LYS GLY GLU GLN LEU LEU THR ALA PHE SEQRES 32 A 416 GLY GLY TYR ALA GLY ILE LEU ARG TYR SER THR GLY VAL HET ZN A 500 1 HETNAM ZN ZINC ION FORMUL 2 ZN ZN 2+ FORMUL 3 HOH *181(H2 O) HELIX 1 1 SER A 9 ASP A 26 1 18 HELIX 2 2 GLN A 44 ALA A 59 1 16 HELIX 3 3 SER A 60 ILE A 62 5 3 HELIX 4 4 SER A 64 LEU A 82 1 19 HELIX 5 5 ARG A 83 TYR A 85 5 3 HELIX 6 6 PHE A 192 VAL A 216 1 25 HELIX 7 7 PRO A 230 GLY A 240 1 11 HELIX 8 8 HIS A 244 ASP A 249 1 6 HELIX 9 9 SER A 263 GLY A 272 1 10 HELIX 10 10 GLY A 272 LEU A 281 1 10 HELIX 11 11 LEU A 281 GLY A 297 1 17 HELIX 12 12 GLY A 304 MET A 314 1 11 HELIX 13 13 ALA A 371 ARG A 382 1 12 HELIX 14 14 PHE A 393 ALA A 402 1 10 SHEET 1 AA 4 THR A 108 GLU A 116 0 SHEET 2 AA 4 MET A 94 ASP A 102 -1 O VAL A 95 N LEU A 115 SHEET 3 AA 4 LEU A 34 ILE A 39 -1 O VAL A 35 N SER A 98 SHEET 4 AA 4 ARG A 126 ASP A 130 -1 O ARG A 126 N TYR A 38 SHEET 1 AB 5 ARG A 167 GLU A 175 0 SHEET 2 AB 5 GLU A 157 LYS A 164 -1 O SER A 158 N ALA A 174 SHEET 3 AB 5 LEU A 147 LEU A 153 -1 O TYR A 148 N LEU A 163 SHEET 4 AB 5 ILE A 222 GLY A 229 1 N ASP A 223 O LEU A 147 SHEET 5 AB 5 VAL A 251 ASP A 256 1 N LEU A 252 O ILE A 225 SHEET 1 AC 4 ALA A 301 TYR A 303 0 SHEET 2 AC 4 TYR A 406 LEU A 410 -1 O GLY A 408 N THR A 302 SHEET 3 AC 4 VAL A 317 SER A 323 -1 N ASP A 318 O ILE A 409 SHEET 4 AC 4 GLU A 385 ILE A 389 1 O GLU A 385 N LEU A 320 SHEET 1 AD 3 TYR A 342 ASP A 346 0 SHEET 2 AD 3 GLU A 328 GLU A 334 -1 O ASP A 329 N ILE A 345 SHEET 3 AD 3 THR A 364 ASP A 370 -1 O THR A 364 N GLU A 334 SSBOND 1 CYS A 335 CYS A 356 1555 1555 2.54 LINK SG CYS A 335 ZN ZN A 500 1555 1555 2.45 LINK NE2 HIS A 339 ZN ZN A 500 1555 1555 2.13 LINK SG CYS A 356 ZN ZN A 500 1555 1555 2.37 LINK SG CYS A 359 ZN ZN A 500 1555 1555 2.38 SITE 1 AC1 5 CYS A 335 ASN A 337 HIS A 339 CYS A 356 SITE 2 AC1 5 CYS A 359 CRYST1 131.020 31.990 111.150 90.00 113.47 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007632 0.000000 0.003314 0.00000 SCALE2 0.000000 0.031260 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009808 0.00000