HEADER CELL ADHESION 18-JAN-12 4AFB TITLE CRYSTAL STRUCTURE OF SUBTYPE-SWITCHED EPITHELIAL ADHESIN 1 TO 3 A TITLE 2 DOMAIN (EPA1TO3A) FROM CANDIDA GLABRATA IN COMPLEX WITH GLYCEROL COMPND MOL_ID: 1; COMPND 2 MOLECULE: EPA1P; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ADHESION DOMAIN (A DOMAIN), RESIDUES 31-271; COMPND 5 SYNONYM: EPITHELIAL ADHESIN 1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES; COMPND 8 OTHER_DETAILS: SUB-TYPE SWITCHED EPA1A VARIANT WHICH EMULATES THE COMPND 9 BINDING POCKET OF EPA3A SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CANDIDA GLABRATA; SOURCE 3 ORGANISM_TAXID: 5478; SOURCE 4 STRAIN: CBS138; SOURCE 5 ATCC: 2001; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: SHUFFLE T7 EXPRESS (C3029); SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS CELL ADHESION, LECTIN, TISSUE INVASION, PATHOGENICITY EXPDTA X-RAY DIFFRACTION AUTHOR M.MAESTRE-REYNA,R.DIDERRICH,M.S.VEELDERS,G.EULENBURG,V.KALUGIN, AUTHOR 2 S.BRUECKNER,P.KELLER,S.RUPP,H.-U.MOESCH,L.-O.ESSEN REVDAT 3 01-MAY-24 4AFB 1 REMARK LINK REVDAT 2 31-OCT-12 4AFB 1 JRNL REVDAT 1 17-OCT-12 4AFB 0 JRNL AUTH M.MAESTRE-REYNA,R.DIDERRICH,M.S.VEELDERS,G.EULENBURG, JRNL AUTH 2 V.KALUGIN,S.BRUCKNER,P.KELLER,S.RUPP,H.MOSCH,L.ESSEN JRNL TITL STRUCTURAL BASIS FOR PROMISCUITY AND SPECIFICITY DURING JRNL TITL 2 CANDIDA GLABRATA INVASION OF HOST EPITHELIA. JRNL REF PROC.NATL.ACAD.SCI.USA V. 109 16864 2012 JRNL REFN ISSN 0027-8424 JRNL PMID 23035251 JRNL DOI 10.1073/PNAS.1207653109 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.87 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 22056 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.169 REMARK 3 R VALUE (WORKING SET) : 0.168 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.500 REMARK 3 FREE R VALUE TEST SET COUNT : 782 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 37.8775 - 3.4519 0.98 3642 143 0.1652 0.1756 REMARK 3 2 3.4519 - 2.7401 0.99 3572 130 0.1579 0.2325 REMARK 3 3 2.7401 - 2.3938 1.00 3544 117 0.1569 0.2346 REMARK 3 4 2.3938 - 2.1750 1.00 3532 134 0.1612 0.2063 REMARK 3 5 2.1750 - 2.0191 1.00 3520 119 0.1743 0.2683 REMARK 3 6 2.0191 - 1.9000 0.99 3464 139 0.2296 0.3234 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.30 REMARK 3 SHRINKAGE RADIUS : 1.11 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 57.81 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.250 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.430 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.39 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.23660 REMARK 3 B22 (A**2) : 6.85020 REMARK 3 B33 (A**2) : -2.61360 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 1918 REMARK 3 ANGLE : 1.275 2623 REMARK 3 CHIRALITY : 0.088 266 REMARK 3 PLANARITY : 0.006 338 REMARK 3 DIHEDRAL : 11.744 674 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESSEQ 40:266) REMARK 3 ORIGIN FOR THE GROUP (A): 1.4539 35.4497 1.6428 REMARK 3 T TENSOR REMARK 3 T11: 0.0950 T22: 0.0781 REMARK 3 T33: 0.0890 T12: -0.0074 REMARK 3 T13: -0.0246 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 1.6250 L22: 0.8790 REMARK 3 L33: 1.6458 L12: -0.1264 REMARK 3 L13: -0.4141 L23: 0.2496 REMARK 3 S TENSOR REMARK 3 S11: -0.0026 S12: 0.0460 S13: 0.1794 REMARK 3 S21: 0.0171 S22: 0.0170 S23: -0.0013 REMARK 3 S31: -0.0962 S32: 0.0813 S33: 0.0037 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4AFB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-JAN-12. REMARK 100 THE DEPOSITION ID IS D_1290050742. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : HORIZONTALLY SIDE DIFFRACTING REMARK 200 SILICON 111 CRYSTAL REMARK 200 OPTICS : FOCUSING MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA, XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22061 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 46.180 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.4 REMARK 200 DATA REDUNDANCY IN SHELL : 4.70 REMARK 200 R MERGE FOR SHELL (I) : 0.49000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: EPA1A WILD TYPE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.89 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.24000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 35.24000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 37.87000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 51.76500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 37.87000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 51.76500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 35.24000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 37.87000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 51.76500 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 35.24000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 37.87000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 51.76500 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3420 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 103.53000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2001 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2047 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2138 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, ARG 226 TO ILE REMARK 400 ENGINEERED RESIDUE IN CHAIN A, GLU 227 TO GLY REMARK 400 ENGINEERED RESIDUE IN CHAIN A, TYR 228 TO LYS REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 10 REMARK 465 GLY A 11 REMARK 465 SER A 12 REMARK 465 SER A 13 REMARK 465 HIS A 14 REMARK 465 HIS A 15 REMARK 465 HIS A 16 REMARK 465 HIS A 17 REMARK 465 HIS A 18 REMARK 465 HIS A 19 REMARK 465 SER A 20 REMARK 465 SER A 21 REMARK 465 GLY A 22 REMARK 465 LEU A 23 REMARK 465 VAL A 24 REMARK 465 PRO A 25 REMARK 465 ARG A 26 REMARK 465 GLY A 27 REMARK 465 SER A 28 REMARK 465 HIS A 29 REMARK 465 MET A 30 REMARK 465 THR A 31 REMARK 465 SER A 32 REMARK 465 SER A 33 REMARK 465 ASN A 34 REMARK 465 ASP A 35 REMARK 465 ILE A 36 REMARK 465 SER A 37 REMARK 465 LEU A 38 REMARK 465 ALA A 39 REMARK 465 TYR A 268 REMARK 465 ASP A 269 REMARK 465 SER A 270 REMARK 465 SER A 271 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 58 CG CD CE NZ REMARK 470 LYS A 72 CG CD CE NZ REMARK 470 LYS A 73 CG CD CE NZ REMARK 470 LYS A 201 CG CD CE NZ REMARK 470 THR A 202 OG1 CG2 REMARK 470 SER A 267 CA C O CB OG REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 LYS A 134 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2037 O HOH A 2062 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 53 -137.15 -87.54 REMARK 500 TYR A 68 89.51 -151.06 REMARK 500 ALA A 176 -64.42 -91.54 REMARK 500 ARG A 181 40.13 -140.34 REMARK 500 THR A 202 63.70 -117.36 REMARK 500 LYS A 228 -137.89 57.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2146 DISTANCE = 14.70 ANGSTROMS REMARK 525 HOH A2153 DISTANCE = 14.38 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1267 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 164 OD1 REMARK 620 2 ASP A 165 OD2 84.4 REMARK 620 3 ASN A 225 OD1 113.2 69.2 REMARK 620 4 GLY A 227 O 164.9 106.7 80.8 REMARK 620 5 ASP A 229 O 81.8 138.2 80.5 95.7 REMARK 620 6 GOL A1268 O2 76.3 135.9 154.8 88.6 77.9 REMARK 620 7 GOL A1268 O1 88.1 73.1 133.8 85.6 144.9 67.1 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1267 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1268 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1269 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1270 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1271 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4A3X RELATED DB: PDB REMARK 900 STRUCTURE OF THE N-TERMINAL DOMAIN OF THE EPA1 ADHESIN (EPA1-NP) REMARK 900 FROM THE PATHOGENIC YEAST CANDIDA GLABRATA, IN COMPLEX WITH CALCIUM REMARK 900 AND LACTOSE REMARK 900 RELATED ID: 4AF9 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF EPITHELIAL ADHESIN 1 A DOMAIN ( EPA1A) FROM REMARK 900 CANDIDA GLABRATA IN COMPLEX WITH GALB1- 3GLC REMARK 900 RELATED ID: 4AFA RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF SUBTYPE-SWITCHED EPITHELIAL ADHESIN 1 TO 2 A REMARK 900 DOMAIN (EPA1TO2A) FROM CANDIDA GLABRATA IN COMPLEX WITH GLYCEROL REMARK 900 RELATED ID: 4AFC RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF SUBTYPE-SWITCHED EPITHELIAL ADHESIN 1 TO 6 A REMARK 900 DOMAIN (EPA1TO6A) FROM CANDIDA GLABRATA IN COMPLEX WITH GALB1-3GLC REMARK 900 RELATED ID: 4ASL RELATED DB: PDB REMARK 900 STRUCTURE OF EPA1A IN COMPLEX WITH THE T-ANTIGEN ( GAL-B1-3-GALNAC) REMARK 999 REMARK 999 SEQUENCE REMARK 999 EPA1A REPRESENTS ONLY THE SIGNAL PEPTIDE FREE N-TERMINAL REMARK 999 REGION FROM THE Q6VBJ0. WE USED THE Q6VBJ0 NUMBERING REMARK 999 THROUGHOUT OUR WORK. DBREF 4AFB A 31 271 UNP Q6VBJ0 Q6VBJ0_CANGB 31 271 SEQADV 4AFB MET A 10 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB GLY A 11 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB SER A 12 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB SER A 13 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB HIS A 14 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB HIS A 15 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB HIS A 16 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB HIS A 17 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB HIS A 18 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB HIS A 19 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB SER A 20 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB SER A 21 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB GLY A 22 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB LEU A 23 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB VAL A 24 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB PRO A 25 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB ARG A 26 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB GLY A 27 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB SER A 28 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB HIS A 29 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB MET A 30 UNP Q6VBJ0 EXPRESSION TAG SEQADV 4AFB ILE A 226 UNP Q6VBJ0 ARG 226 ENGINEERED MUTATION SEQADV 4AFB GLY A 227 UNP Q6VBJ0 GLU 227 ENGINEERED MUTATION SEQADV 4AFB LYS A 228 UNP Q6VBJ0 TYR 228 ENGINEERED MUTATION SEQRES 1 A 262 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 262 LEU VAL PRO ARG GLY SER HIS MET THR SER SER ASN ASP SEQRES 3 A 262 ILE SER LEU ALA SER LYS ASP PRO THR THR PHE PRO LEU SEQRES 4 A 262 GLY CYS SER PRO ASP ILE THR THR PRO LYS LYS GLY LEU SEQRES 5 A 262 SER MET GLU LEU TYR SER TYR ASP PHE ARG LYS LYS GLY SEQRES 6 A 262 SER TYR PRO CYS TRP ASP ALA ALA TYR LEU ASP PRO ASN SEQRES 7 A 262 TYR PRO ARG THR GLY TYR LYS SER HIS ARG LEU LEU ALA SEQRES 8 A 262 LYS VAL ASP GLY VAL THR GLY ASN ILE ASN PHE TYR TYR SEQRES 9 A 262 HIS ALA THR LYS GLY CYS THR PRO GLN LEU GLY HIS LEU SEQRES 10 A 262 PRO ALA SER TYR ASN TYR PRO LYS PRO LEU THR MET THR SEQRES 11 A 262 ASN PHE THR MET LEU LEU TYR GLY TYR PHE ARG PRO LYS SEQRES 12 A 262 VAL THR GLY PHE HIS THR PHE THR ILE SER ALA ASP ASP SEQRES 13 A 262 LEU LEU PHE VAL ASN PHE GLY ALA GLY ASN ALA PHE ASP SEQRES 14 A 262 CYS CYS ARG ARG ASP SER SER ALA ASP HIS PHE GLY ASN SEQRES 15 A 262 TYR GLN ALA TYR ALA ILE TRP GLY SER LYS THR ALA LYS SEQRES 16 A 262 ASP GLU LEU THR VAL HIS LEU ASP ALA GLY VAL TYR TYR SEQRES 17 A 262 PRO ILE ARG LEU PHE TYR ASN ASN ILE GLY LYS ASP GLY SEQRES 18 A 262 ALA LEU SER PHE THR PHE LYS THR GLU SER ASN GLU ASN SEQRES 19 A 262 THR VAL SER ASP PHE SER GLU TYR PHE PHE SER LEU ASP SEQRES 20 A 262 ASP THR GLU GLU GLY CYS PRO GLY LEU ILE SER TYR ASP SEQRES 21 A 262 SER SER HET CA A1267 1 HET GOL A1268 12 HET GOL A1269 14 HET GOL A1270 14 HET GOL A1271 14 HETNAM CA CALCIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 CA CA 2+ FORMUL 3 GOL 4(C3 H8 O3) FORMUL 7 HOH *163(H2 O) HELIX 1 1 ALA A 81 ASP A 85 5 5 HELIX 2 2 THR A 91 HIS A 96 5 6 HELIX 3 3 PRO A 127 ASN A 131 5 5 HELIX 4 4 ARG A 181 ALA A 186 1 6 SHEET 1 AA 6 LYS A 58 LYS A 59 0 SHEET 2 AA 6 PHE A 252 SER A 254 -1 O SER A 254 N LYS A 58 SHEET 3 AA 6 PHE A 141 PHE A 149 1 O TYR A 148 N PHE A 253 SHEET 4 AA 6 TYR A 217 ASN A 225 -1 O TYR A 217 N PHE A 149 SHEET 5 AA 6 LEU A 166 PHE A 171 -1 O LEU A 166 N ASN A 224 SHEET 6 AA 6 ALA A 194 ILE A 197 -1 O ALA A 194 N VAL A 169 SHEET 1 AB 5 LYS A 58 LYS A 59 0 SHEET 2 AB 5 PHE A 252 SER A 254 -1 O SER A 254 N LYS A 58 SHEET 3 AB 5 PHE A 141 PHE A 149 1 O TYR A 148 N PHE A 253 SHEET 4 AB 5 LEU A 61 SER A 67 -1 O SER A 62 N TYR A 146 SHEET 5 AB 5 LEU A 98 VAL A 105 -1 N LEU A 99 O LEU A 65 SHEET 1 AC 4 PHE A 111 TYR A 113 0 SHEET 2 AC 4 GLY A 230 THR A 238 -1 O GLY A 230 N TYR A 113 SHEET 3 AC 4 GLY A 155 ASP A 164 -1 O THR A 158 N LYS A 237 SHEET 4 AC 4 LYS A 204 LEU A 211 -1 O ASP A 205 N ILE A 161 SHEET 1 AD 2 LEU A 123 GLY A 124 0 SHEET 2 AD 2 LEU A 136 THR A 137 -1 O LEU A 136 N GLY A 124 SSBOND 1 CYS A 50 CYS A 179 1555 1555 2.05 SSBOND 2 CYS A 78 CYS A 119 1555 1555 2.05 SSBOND 3 CYS A 180 CYS A 262 1555 1555 2.06 LINK OD1 ASP A 164 CA CA A1267 1555 1555 2.30 LINK OD2 ASP A 165 CA CA A1267 1555 1555 2.53 LINK OD1 ASN A 225 CA CA A1267 1555 1555 2.41 LINK O GLY A 227 CA CA A1267 1555 1555 2.39 LINK O ASP A 229 CA CA A1267 1555 1555 2.32 LINK CA CA A1267 O2 GOL A1268 1555 1555 2.52 LINK CA CA A1267 O1 GOL A1268 1555 1555 2.58 CISPEP 1 TYR A 76 PRO A 77 0 -4.11 CISPEP 2 ASP A 164 ASP A 165 0 10.11 SITE 1 AC1 6 ASP A 164 ASP A 165 ASN A 225 GLY A 227 SITE 2 AC1 6 ASP A 229 GOL A1268 SITE 1 AC2 8 ASP A 164 ASP A 165 TRP A 198 GLY A 227 SITE 2 AC2 8 LYS A 228 ASP A 229 CA A1267 HOH A2129 SITE 1 AC3 4 THR A 238 ASN A 241 TYR A 251 HOH A2101 SITE 1 AC4 6 PHE A 156 THR A 158 LYS A 237 THR A 238 SITE 2 AC4 6 HOH A2134 HOH A2162 SITE 1 AC5 6 TYR A 112 HIS A 125 ILE A 266 HOH A2013 SITE 2 AC5 6 HOH A2074 HOH A2090 CRYST1 75.740 103.530 70.480 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013203 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009659 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014188 0.00000