HEADER TRANSFERASE/RNA 07-MAR-12 4AM3 TITLE CRYSTAL STRUCTURE OF C. CRESCENTUS PNPASE BOUND TO RNA COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: POLYNUCLEOTIDE PHOSPHORYLASE, PNPASE; COMPND 5 EC: 2.7.7.8; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RNA, 5'-R(*UP*AP*AP*CP*UP*UP*UP*GP*GP)-3'; COMPND 9 CHAIN: D, E, H, I; COMPND 10 FRAGMENT: CO-PURIFIED RNA FROM E. COLI EXPRESSION STRAIN SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAULOBACTER VIBRIOIDES; SOURCE 3 ORGANISM_TAXID: 190650; SOURCE 4 STRAIN: CB15; SOURCE 5 ATCC: 19089; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 MOL_ID: 2; SOURCE 10 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 11 ORGANISM_TAXID: 469008; SOURCE 12 STRAIN: BL21(DE3) KEYWDS TRANSFERASE-RNA COMPLEX, KH DOMAIN, RNASE E EXPDTA X-RAY DIFFRACTION AUTHOR S.W.HARDWICK,T.GUBBEY,I.HUG,U.JENAL,B.F.LUISI REVDAT 4 20-DEC-23 4AM3 1 REMARK REVDAT 3 05-FEB-14 4AM3 1 SOURCE JRNL REVDAT 2 04-JUL-12 4AM3 1 JRNL REVDAT 1 18-APR-12 4AM3 0 JRNL AUTH S.W.HARDWICK,T.GUBBEY,I.HUG,U.JENAL,B.F.LUISI JRNL TITL CRYSTAL STRUCTURE OF CAULOBACTER CRESCENTUS POLYNUCLEOTIDE JRNL TITL 2 PHOSPHORYLASE REVEALS A MECHANISM OF RNA SUBSTRATE JRNL TITL 3 CHANNELLING AND RNA DEGRADOSOME ASSEMBLY. JRNL REF OPEN BIOL. V. 2 20028 2012 JRNL REFN ESSN 2046-2441 JRNL PMID 22724061 JRNL DOI 10.1098/RSOB.120028 REMARK 2 REMARK 2 RESOLUTION. 3.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.87 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.9 REMARK 3 NUMBER OF REFLECTIONS : 47529 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.210 REMARK 3 FREE R VALUE : 0.254 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2539 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 3.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 3.08 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3210 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.30 REMARK 3 BIN R VALUE (WORKING SET) : 0.3280 REMARK 3 BIN FREE R VALUE SET COUNT : 188 REMARK 3 BIN FREE R VALUE : 0.3740 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 13720 REMARK 3 NUCLEIC ACID ATOMS : 211 REMARK 3 HETEROGEN ATOMS : 30 REMARK 3 SOLVENT ATOMS : 54 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 54.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.03000 REMARK 3 B22 (A**2) : 0.10000 REMARK 3 B33 (A**2) : -0.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.422 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.332 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 37.328 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.915 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.881 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 14193 ; 0.012 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 19274 ; 1.822 ; 1.966 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1861 ; 6.975 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 542 ;39.664 ;24.760 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 2328 ;18.313 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 80 ;16.540 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 2238 ; 0.124 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 10525 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 556 A 619 REMARK 3 ORIGIN FOR THE GROUP (A): -46.4013 54.5885 -74.6216 REMARK 3 T TENSOR REMARK 3 T11: 0.6183 T22: 0.0918 REMARK 3 T33: 0.2133 T12: -0.0086 REMARK 3 T13: -0.0216 T23: 0.0285 REMARK 3 L TENSOR REMARK 3 L11: 4.4676 L22: 8.6637 REMARK 3 L33: 3.9860 L12: -2.0557 REMARK 3 L13: -1.8450 L23: 3.4963 REMARK 3 S TENSOR REMARK 3 S11: -0.0316 S12: -0.0532 S13: 0.1063 REMARK 3 S21: -0.3922 S22: -0.0383 S23: -0.5440 REMARK 3 S31: -0.1528 S32: -0.2159 S33: 0.0699 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 556 B 619 REMARK 3 ORIGIN FOR THE GROUP (A): -21.9828 36.2460 -79.1428 REMARK 3 T TENSOR REMARK 3 T11: 0.5669 T22: 0.2396 REMARK 3 T33: 0.0504 T12: 0.0976 REMARK 3 T13: 0.0457 T23: 0.0214 REMARK 3 L TENSOR REMARK 3 L11: 4.1570 L22: 4.1348 REMARK 3 L33: 9.6021 L12: 0.6238 REMARK 3 L13: 1.1311 L23: -3.3530 REMARK 3 S TENSOR REMARK 3 S11: 0.0686 S12: 0.1578 S13: 0.4284 REMARK 3 S21: -0.5563 S22: -0.3392 S23: 0.0715 REMARK 3 S31: 1.0314 S32: 0.9515 S33: 0.2706 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 556 C 619 REMARK 3 ORIGIN FOR THE GROUP (A): -18.1809 63.4945 -79.3499 REMARK 3 T TENSOR REMARK 3 T11: 0.3197 T22: 0.4473 REMARK 3 T33: 0.1508 T12: -0.0474 REMARK 3 T13: 0.1712 T23: 0.1022 REMARK 3 L TENSOR REMARK 3 L11: 5.9419 L22: 3.8826 REMARK 3 L33: 5.7331 L12: 0.8007 REMARK 3 L13: 3.0235 L23: 2.5874 REMARK 3 S TENSOR REMARK 3 S11: 0.0048 S12: 0.0300 S13: -0.1671 REMARK 3 S21: -0.3106 S22: 0.0756 S23: -0.0265 REMARK 3 S31: -0.0288 S32: 0.3218 S33: -0.0804 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 230 REMARK 3 ORIGIN FOR THE GROUP (A): -39.7345 27.7610 -36.2859 REMARK 3 T TENSOR REMARK 3 T11: 0.6268 T22: 0.2143 REMARK 3 T33: 0.2603 T12: 0.0007 REMARK 3 T13: -0.0532 T23: -0.0186 REMARK 3 L TENSOR REMARK 3 L11: 0.9124 L22: 0.6039 REMARK 3 L33: 0.6285 L12: -0.5408 REMARK 3 L13: 0.3961 L23: -0.0679 REMARK 3 S TENSOR REMARK 3 S11: 0.0562 S12: -0.0448 S13: 0.1421 REMARK 3 S21: 0.0374 S22: -0.0066 S23: 0.0069 REMARK 3 S31: 0.4989 S32: -0.0103 S33: -0.0496 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 230 REMARK 3 ORIGIN FOR THE GROUP (A): -0.2674 56.9861 -40.5016 REMARK 3 T TENSOR REMARK 3 T11: 0.0284 T22: 0.7786 REMARK 3 T33: 0.3467 T12: 0.0650 REMARK 3 T13: 0.0244 T23: 0.1145 REMARK 3 L TENSOR REMARK 3 L11: 0.1520 L22: 1.6539 REMARK 3 L33: 0.4380 L12: -0.2974 REMARK 3 L13: 0.1633 L23: 0.0163 REMARK 3 S TENSOR REMARK 3 S11: 0.0290 S12: 0.1669 S13: 0.1626 REMARK 3 S21: 0.0735 S22: -0.1886 S23: -0.0470 REMARK 3 S31: 0.0950 S32: 0.4792 S33: 0.1596 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 230 REMARK 3 ORIGIN FOR THE GROUP (A): -44.8585 76.5288 -36.4699 REMARK 3 T TENSOR REMARK 3 T11: 0.4329 T22: 0.2912 REMARK 3 T33: 0.3490 T12: 0.0246 REMARK 3 T13: -0.0307 T23: -0.0230 REMARK 3 L TENSOR REMARK 3 L11: 0.3647 L22: 1.1529 REMARK 3 L33: 0.9193 L12: 0.1658 REMARK 3 L13: -0.0575 L23: -0.1145 REMARK 3 S TENSOR REMARK 3 S11: 0.0069 S12: 0.0249 S13: -0.0590 REMARK 3 S21: 0.1181 S22: -0.1023 S23: 0.0410 REMARK 3 S31: -0.2767 S32: -0.0963 S33: 0.0954 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 331 A 553 REMARK 3 ORIGIN FOR THE GROUP (A): -56.6500 47.2946 -39.8728 REMARK 3 T TENSOR REMARK 3 T11: 0.3019 T22: 0.4128 REMARK 3 T33: 0.3951 T12: -0.0505 REMARK 3 T13: -0.0249 T23: -0.0301 REMARK 3 L TENSOR REMARK 3 L11: 0.0833 L22: 1.1062 REMARK 3 L33: 1.1333 L12: 0.1561 REMARK 3 L13: -0.1968 L23: -0.1488 REMARK 3 S TENSOR REMARK 3 S11: 0.0340 S12: -0.0610 S13: 0.0547 REMARK 3 S21: -0.0673 S22: -0.0356 S23: 0.1439 REMARK 3 S31: 0.1370 S32: -0.1928 S33: 0.0016 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 331 B 553 REMARK 3 ORIGIN FOR THE GROUP (A): -9.6092 32.7353 -44.0443 REMARK 3 T TENSOR REMARK 3 T11: 0.4039 T22: 0.4816 REMARK 3 T33: 0.2377 T12: 0.3230 REMARK 3 T13: 0.0346 T23: -0.0351 REMARK 3 L TENSOR REMARK 3 L11: 0.9262 L22: 0.5505 REMARK 3 L33: 1.0100 L12: 0.5096 REMARK 3 L13: 0.3188 L23: -0.3009 REMARK 3 S TENSOR REMARK 3 S11: 0.0398 S12: 0.1050 S13: 0.0937 REMARK 3 S21: -0.1407 S22: -0.1152 S23: 0.0069 REMARK 3 S31: 0.4408 S32: 0.4087 S33: 0.0754 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 331 C 553 REMARK 3 ORIGIN FOR THE GROUP (A): -20.3490 81.2001 -44.1694 REMARK 3 T TENSOR REMARK 3 T11: 0.3349 T22: 0.3940 REMARK 3 T33: 0.3719 T12: -0.1429 REMARK 3 T13: -0.0508 T23: 0.1127 REMARK 3 L TENSOR REMARK 3 L11: 0.4963 L22: 0.4060 REMARK 3 L33: 1.0126 L12: -0.1105 REMARK 3 L13: 0.0693 L23: -0.1191 REMARK 3 S TENSOR REMARK 3 S11: -0.0288 S12: 0.0728 S13: 0.0282 REMARK 3 S21: 0.0321 S22: -0.1814 S23: -0.0602 REMARK 3 S31: -0.2199 S32: 0.2725 S33: 0.2102 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 233 A 310 REMARK 3 ORIGIN FOR THE GROUP (A): -49.5469 44.3560 -5.1727 REMARK 3 T TENSOR REMARK 3 T11: 0.7768 T22: 0.3250 REMARK 3 T33: 0.1704 T12: 0.0822 REMARK 3 T13: -0.0084 T23: -0.0810 REMARK 3 L TENSOR REMARK 3 L11: 5.2753 L22: 1.1893 REMARK 3 L33: 2.9526 L12: -1.2881 REMARK 3 L13: 2.1865 L23: -1.8709 REMARK 3 S TENSOR REMARK 3 S11: -0.3753 S12: -0.1728 S13: 0.6322 REMARK 3 S21: 0.2689 S22: 0.0290 S23: -0.1912 REMARK 3 S31: -0.4046 S32: -0.0475 S33: 0.3463 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 233 B 310 REMARK 3 ORIGIN FOR THE GROUP (A): -4.6062 39.0656 -8.8134 REMARK 3 T TENSOR REMARK 3 T11: 0.4216 T22: 0.6681 REMARK 3 T33: 0.3830 T12: -0.1683 REMARK 3 T13: 0.0586 T23: 0.1482 REMARK 3 L TENSOR REMARK 3 L11: 0.3283 L22: 7.0012 REMARK 3 L33: 5.3948 L12: -1.1561 REMARK 3 L13: -0.2398 L23: 4.7490 REMARK 3 S TENSOR REMARK 3 S11: -0.2579 S12: 0.3773 S13: 0.0874 REMARK 3 S21: 1.3074 S22: -0.9361 S23: 0.6588 REMARK 3 S31: 0.7502 S32: 0.3065 S33: 1.1940 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 233 C 310 REMARK 3 ORIGIN FOR THE GROUP (A): -20.9525 82.5278 -7.1930 REMARK 3 T TENSOR REMARK 3 T11: 0.5617 T22: 0.5348 REMARK 3 T33: 0.2139 T12: -0.0418 REMARK 3 T13: -0.2152 T23: -0.0221 REMARK 3 L TENSOR REMARK 3 L11: 2.0504 L22: 1.3323 REMARK 3 L33: 6.3973 L12: 1.4800 REMARK 3 L13: -3.4694 L23: -2.1349 REMARK 3 S TENSOR REMARK 3 S11: 0.1502 S12: -0.5606 S13: -0.0973 REMARK 3 S21: 0.3567 S22: -0.3701 S23: -0.0431 REMARK 3 S31: 0.1556 S32: 1.0228 S33: 0.2200 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. RNA CHAIN E RESIDUE 7 IS DISORDERED AND BASE IS NOT REMARK 3 MODELLED RNA CHAINS D I AND H ARE DISORDERED AND BASE ONLY IS REMARK 3 MODELLED. S1 DOMAINS RESIDUES 623-712 WERE NOT MODELLED REMARK 4 REMARK 4 4AM3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 07-MAR-12. REMARK 100 THE DEPOSITION ID IS D_1290051593. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 50090 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.000 REMARK 200 RESOLUTION RANGE LOW (A) : 35.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 4.500 REMARK 200 R MERGE (I) : 0.13000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.16 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 4.50 REMARK 200 R MERGE FOR SHELL (I) : 0.52000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3GME REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 52.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.58 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 24% WT/V PEG 3350, 0.1 M BIS-TRIS PH REMARK 280 5.5, 0.1 M AMMONIUM ACETATE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 2 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 X,-Y,-Z REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 -X,-Y+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 56.03000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 118.11000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 56.03000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 118.11000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEPTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEPTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 12620 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 72740 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -88.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, H, I REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -4 REMARK 465 PRO A -3 REMARK 465 LEU A -2 REMARK 465 ALA A 621 REMARK 465 GLU A 622 REMARK 465 VAL A 623 REMARK 465 GLY A 624 REMARK 465 LYS A 625 REMARK 465 ILE A 626 REMARK 465 TYR A 627 REMARK 465 ASP A 628 REMARK 465 GLY A 629 REMARK 465 LYS A 630 REMARK 465 VAL A 631 REMARK 465 VAL A 632 REMARK 465 LYS A 633 REMARK 465 VAL A 634 REMARK 465 VAL A 635 REMARK 465 ASP A 636 REMARK 465 PHE A 637 REMARK 465 GLY A 638 REMARK 465 ALA A 639 REMARK 465 PHE A 640 REMARK 465 VAL A 641 REMARK 465 ASN A 642 REMARK 465 PHE A 643 REMARK 465 PHE A 644 REMARK 465 GLY A 645 REMARK 465 ALA A 646 REMARK 465 LYS A 647 REMARK 465 ASP A 648 REMARK 465 GLY A 649 REMARK 465 LEU A 650 REMARK 465 VAL A 651 REMARK 465 HIS A 652 REMARK 465 VAL A 653 REMARK 465 SER A 654 REMARK 465 GLN A 655 REMARK 465 ILE A 656 REMARK 465 SER A 657 REMARK 465 ASN A 658 REMARK 465 GLU A 659 REMARK 465 ARG A 660 REMARK 465 VAL A 661 REMARK 465 ALA A 662 REMARK 465 LYS A 663 REMARK 465 PRO A 664 REMARK 465 SER A 665 REMARK 465 ASP A 666 REMARK 465 VAL A 667 REMARK 465 LEU A 668 REMARK 465 LYS A 669 REMARK 465 GLU A 670 REMARK 465 GLY A 671 REMARK 465 GLN A 672 REMARK 465 MET A 673 REMARK 465 VAL A 674 REMARK 465 LYS A 675 REMARK 465 VAL A 676 REMARK 465 LYS A 677 REMARK 465 LEU A 678 REMARK 465 LEU A 679 REMARK 465 GLY A 680 REMARK 465 PHE A 681 REMARK 465 ASP A 682 REMARK 465 ASP A 683 REMARK 465 ARG A 684 REMARK 465 GLY A 685 REMARK 465 LYS A 686 REMARK 465 THR A 687 REMARK 465 LYS A 688 REMARK 465 LEU A 689 REMARK 465 SER A 690 REMARK 465 MET A 691 REMARK 465 LYS A 692 REMARK 465 VAL A 693 REMARK 465 VAL A 694 REMARK 465 ASP A 695 REMARK 465 GLN A 696 REMARK 465 GLU A 697 REMARK 465 THR A 698 REMARK 465 GLY A 699 REMARK 465 GLU A 700 REMARK 465 ASP A 701 REMARK 465 LEU A 702 REMARK 465 SER A 703 REMARK 465 LYS A 704 REMARK 465 LYS A 705 REMARK 465 GLU A 706 REMARK 465 ALA A 707 REMARK 465 ALA A 708 REMARK 465 ALA A 709 REMARK 465 GLU A 710 REMARK 465 GLU A 711 REMARK 465 ALA A 712 REMARK 465 GLY B -4 REMARK 465 PRO B -3 REMARK 465 LEU B -2 REMARK 465 GLU B 620 REMARK 465 ALA B 621 REMARK 465 GLU B 622 REMARK 465 VAL B 623 REMARK 465 GLY B 624 REMARK 465 LYS B 625 REMARK 465 ILE B 626 REMARK 465 TYR B 627 REMARK 465 ASP B 628 REMARK 465 GLY B 629 REMARK 465 LYS B 630 REMARK 465 VAL B 631 REMARK 465 VAL B 632 REMARK 465 LYS B 633 REMARK 465 VAL B 634 REMARK 465 VAL B 635 REMARK 465 ASP B 636 REMARK 465 PHE B 637 REMARK 465 GLY B 638 REMARK 465 ALA B 639 REMARK 465 PHE B 640 REMARK 465 VAL B 641 REMARK 465 ASN B 642 REMARK 465 PHE B 643 REMARK 465 PHE B 644 REMARK 465 GLY B 645 REMARK 465 ALA B 646 REMARK 465 LYS B 647 REMARK 465 ASP B 648 REMARK 465 GLY B 649 REMARK 465 LEU B 650 REMARK 465 VAL B 651 REMARK 465 HIS B 652 REMARK 465 VAL B 653 REMARK 465 SER B 654 REMARK 465 GLN B 655 REMARK 465 ILE B 656 REMARK 465 SER B 657 REMARK 465 ASN B 658 REMARK 465 GLU B 659 REMARK 465 ARG B 660 REMARK 465 VAL B 661 REMARK 465 ALA B 662 REMARK 465 LYS B 663 REMARK 465 PRO B 664 REMARK 465 SER B 665 REMARK 465 ASP B 666 REMARK 465 VAL B 667 REMARK 465 LEU B 668 REMARK 465 LYS B 669 REMARK 465 GLU B 670 REMARK 465 GLY B 671 REMARK 465 GLN B 672 REMARK 465 MET B 673 REMARK 465 VAL B 674 REMARK 465 LYS B 675 REMARK 465 VAL B 676 REMARK 465 LYS B 677 REMARK 465 LEU B 678 REMARK 465 LEU B 679 REMARK 465 GLY B 680 REMARK 465 PHE B 681 REMARK 465 ASP B 682 REMARK 465 ASP B 683 REMARK 465 ARG B 684 REMARK 465 GLY B 685 REMARK 465 LYS B 686 REMARK 465 THR B 687 REMARK 465 LYS B 688 REMARK 465 LEU B 689 REMARK 465 SER B 690 REMARK 465 MET B 691 REMARK 465 LYS B 692 REMARK 465 VAL B 693 REMARK 465 VAL B 694 REMARK 465 ASP B 695 REMARK 465 GLN B 696 REMARK 465 GLU B 697 REMARK 465 THR B 698 REMARK 465 GLY B 699 REMARK 465 GLU B 700 REMARK 465 ASP B 701 REMARK 465 LEU B 702 REMARK 465 SER B 703 REMARK 465 LYS B 704 REMARK 465 LYS B 705 REMARK 465 GLU B 706 REMARK 465 ALA B 707 REMARK 465 ALA B 708 REMARK 465 ALA B 709 REMARK 465 GLU B 710 REMARK 465 GLU B 711 REMARK 465 ALA B 712 REMARK 465 GLY C -4 REMARK 465 PRO C -3 REMARK 465 LEU C -2 REMARK 465 GLU C 620 REMARK 465 ALA C 621 REMARK 465 GLU C 622 REMARK 465 VAL C 623 REMARK 465 GLY C 624 REMARK 465 LYS C 625 REMARK 465 ILE C 626 REMARK 465 TYR C 627 REMARK 465 ASP C 628 REMARK 465 GLY C 629 REMARK 465 LYS C 630 REMARK 465 VAL C 631 REMARK 465 VAL C 632 REMARK 465 LYS C 633 REMARK 465 VAL C 634 REMARK 465 VAL C 635 REMARK 465 ASP C 636 REMARK 465 PHE C 637 REMARK 465 GLY C 638 REMARK 465 ALA C 639 REMARK 465 PHE C 640 REMARK 465 VAL C 641 REMARK 465 ASN C 642 REMARK 465 PHE C 643 REMARK 465 PHE C 644 REMARK 465 GLY C 645 REMARK 465 ALA C 646 REMARK 465 LYS C 647 REMARK 465 ASP C 648 REMARK 465 GLY C 649 REMARK 465 LEU C 650 REMARK 465 VAL C 651 REMARK 465 HIS C 652 REMARK 465 VAL C 653 REMARK 465 SER C 654 REMARK 465 GLN C 655 REMARK 465 ILE C 656 REMARK 465 SER C 657 REMARK 465 ASN C 658 REMARK 465 GLU C 659 REMARK 465 ARG C 660 REMARK 465 VAL C 661 REMARK 465 ALA C 662 REMARK 465 LYS C 663 REMARK 465 PRO C 664 REMARK 465 SER C 665 REMARK 465 ASP C 666 REMARK 465 VAL C 667 REMARK 465 LEU C 668 REMARK 465 LYS C 669 REMARK 465 GLU C 670 REMARK 465 GLY C 671 REMARK 465 GLN C 672 REMARK 465 MET C 673 REMARK 465 VAL C 674 REMARK 465 LYS C 675 REMARK 465 VAL C 676 REMARK 465 LYS C 677 REMARK 465 LEU C 678 REMARK 465 LEU C 679 REMARK 465 GLY C 680 REMARK 465 PHE C 681 REMARK 465 ASP C 682 REMARK 465 ASP C 683 REMARK 465 ARG C 684 REMARK 465 GLY C 685 REMARK 465 LYS C 686 REMARK 465 THR C 687 REMARK 465 LYS C 688 REMARK 465 LEU C 689 REMARK 465 SER C 690 REMARK 465 MET C 691 REMARK 465 LYS C 692 REMARK 465 VAL C 693 REMARK 465 VAL C 694 REMARK 465 ASP C 695 REMARK 465 GLN C 696 REMARK 465 GLU C 697 REMARK 465 THR C 698 REMARK 465 GLY C 699 REMARK 465 GLU C 700 REMARK 465 ASP C 701 REMARK 465 LEU C 702 REMARK 465 SER C 703 REMARK 465 LYS C 704 REMARK 465 LYS C 705 REMARK 465 GLU C 706 REMARK 465 ALA C 707 REMARK 465 ALA C 708 REMARK 465 ALA C 709 REMARK 465 GLU C 710 REMARK 465 GLU C 711 REMARK 465 ALA C 712 REMARK 465 A D 2 REMARK 465 A D 3 REMARK 465 C D 4 REMARK 465 U D 5 REMARK 465 U D 6 REMARK 465 U D 7 REMARK 465 G D 8 REMARK 465 G D 9 REMARK 465 U H 1 REMARK 465 A H 3 REMARK 465 C H 4 REMARK 465 U H 5 REMARK 465 U H 6 REMARK 465 U H 7 REMARK 465 G H 8 REMARK 465 G H 9 REMARK 465 A I 2 REMARK 465 A I 3 REMARK 465 C I 4 REMARK 465 U I 5 REMARK 465 U I 6 REMARK 465 U I 7 REMARK 465 G I 8 REMARK 465 G I 9 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 239 CG OD1 OD2 REMARK 470 LYS A 244 CD CE NZ REMARK 470 LYS A 246 CD CE NZ REMARK 470 LYS A 261 CG CD CE NZ REMARK 470 GLN A 263 CG CD OE1 NE2 REMARK 470 TYR A 266 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU A 267 CG CD OE1 OE2 REMARK 470 LYS A 273 CG CD CE NZ REMARK 470 LEU A 282 CG CD1 CD2 REMARK 470 LYS A 300 CE NZ REMARK 470 LYS A 608 CD CE NZ REMARK 470 GLU A 620 CG CD OE1 OE2 REMARK 470 ARG B 6 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 7 CG CD CE NZ REMARK 470 LYS B 51 CD CE NZ REMARK 470 LYS B 174 CD CE NZ REMARK 470 HIS B 225 O REMARK 470 LYS B 242 CG CD CE NZ REMARK 470 LYS B 244 CG CD CE NZ REMARK 470 LYS B 258 CG CD CE NZ REMARK 470 ILE B 259 CG1 CG2 CD1 REMARK 470 LYS B 261 CG CD CE NZ REMARK 470 LYS B 262 CG CD CE NZ REMARK 470 GLN B 263 CG CD OE1 NE2 REMARK 470 ARG B 265 CD NE CZ NH1 NH2 REMARK 470 TYR B 266 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU B 267 CG CD OE1 OE2 REMARK 470 VAL B 269 CG1 CG2 REMARK 470 LYS B 273 CG CD CE NZ REMARK 470 LYS B 274 CG CD CE NZ REMARK 470 LYS B 275 CE NZ REMARK 470 ILE B 277 CG1 CG2 CD1 REMARK 470 LEU B 280 CG CD1 CD2 REMARK 470 LEU B 282 CG CD1 CD2 REMARK 470 GLU B 285 CG CD OE1 OE2 REMARK 470 ASN B 286 CG OD1 ND2 REMARK 470 TYR B 290 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 LEU B 293 CG CD1 CD2 REMARK 470 VAL B 306 CG1 CG2 REMARK 470 LYS B 324 CG CD CE NZ REMARK 470 GLN B 474 CG CD OE1 NE2 REMARK 470 ILE B 516 CG1 CG2 CD1 REMARK 470 GLU B 522 CG CD OE1 OE2 REMARK 470 LYS B 529 CE NZ REMARK 470 ALA B 554 O REMARK 470 LYS B 566 CE NZ REMARK 470 ARG B 568 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 588 CE NZ REMARK 470 LYS B 598 CE NZ REMARK 470 ASP B 619 CG OD1 OD2 REMARK 470 HIS C 225 O REMARK 470 GLU C 236 CG CD OE1 OE2 REMARK 470 LYS C 242 CG CD CE NZ REMARK 470 LYS C 244 CG CD CE NZ REMARK 470 LYS C 246 CG CD CE NZ REMARK 470 LEU C 248 CG CD1 CD2 REMARK 470 LYS C 258 CG CD CE NZ REMARK 470 LYS C 261 CG CD CE NZ REMARK 470 LYS C 262 CG CD CE NZ REMARK 470 GLN C 263 CG CD OE1 NE2 REMARK 470 ASP C 264 CG OD1 OD2 REMARK 470 TYR C 266 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLU C 267 CG CD OE1 OE2 REMARK 470 VAL C 269 CG1 CG2 REMARK 470 LYS C 273 CE NZ REMARK 470 LYS C 274 CG CD CE NZ REMARK 470 LYS C 275 CG CD CE NZ REMARK 470 LEU C 280 CG CD1 CD2 REMARK 470 LEU C 282 CG CD1 CD2 REMARK 470 TYR C 290 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 ASP C 291 CG OD1 OD2 REMARK 470 LEU C 293 CG CD1 CD2 REMARK 470 LYS C 294 CG CD CE NZ REMARK 470 LEU C 295 CG CD1 CD2 REMARK 470 LYS C 300 CG CD CE NZ REMARK 470 ARG C 394 CG CD NE CZ NH1 NH2 REMARK 470 GLN C 474 CG CD OE1 NE2 REMARK 470 ASP C 552 O REMARK 470 LYS C 556 NZ REMARK 470 LYS C 588 CG CD CE NZ REMARK 470 LYS C 615 CG CD CE NZ REMARK 470 SER C 616 O REMARK 470 U D 1 O5' C5' C4' O4' C3' O3' C2' REMARK 470 U D 1 O2' REMARK 470 U E 7 N1 C2 O2 N3 C4 O4 C5 REMARK 470 U E 7 C6 REMARK 470 A H 2 P OP1 OP2 O5' C5' C4' O4' REMARK 470 A H 2 C3' O3' C2' O2' REMARK 470 U I 1 O5' C5' C4' O4' C3' O3' C2' REMARK 470 U I 1 O2' REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG B 317 O ASP B 319 1.76 REMARK 500 O ILE C 277 O LEU C 280 1.79 REMARK 500 OD1 ASP C 488 OD2 ASP C 494 1.79 REMARK 500 O LYS B 262 OD1 ASP B 264 1.87 REMARK 500 OD2 ASP C 237 OD2 ASP C 239 2.01 REMARK 500 O ASP C 291 N LEU C 293 2.02 REMARK 500 CB ALA A 272 CZ PHE A 299 2.12 REMARK 500 O ALA B 276 CB LEU B 280 2.14 REMARK 500 O ALA B 254 N ALA B 256 2.14 REMARK 500 N LEU C 484 OE1 GLU C 487 2.16 REMARK 500 C GLY B 281 O GLY B 289 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 225 CG HIS A 225 CD2 0.057 REMARK 500 HIS C 489 CG HIS C 489 CD2 0.057 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 93 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 GLY B 315 N - CA - C ANGL. DEV. = -15.5 DEGREES REMARK 500 GLU C 10 N - CA - C ANGL. DEV. = -16.6 DEGREES REMARK 500 ILE C 259 CB - CA - C ANGL. DEV. = 15.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 4 88.07 73.50 REMARK 500 LYS A 7 19.50 -58.29 REMARK 500 ILE A 9 117.62 60.00 REMARK 500 GLU A 37 -25.29 69.49 REMARK 500 PRO A 52 -102.14 -4.98 REMARK 500 GLN A 54 -75.21 -55.88 REMARK 500 ASP A 55 -47.64 113.04 REMARK 500 VAL A 104 135.73 -36.61 REMARK 500 LYS A 108 35.83 -145.81 REMARK 500 GLU A 123 -54.36 -136.92 REMARK 500 CYS A 139 50.05 -93.47 REMARK 500 LEU A 140 -23.04 -141.71 REMARK 500 MET A 146 35.57 -85.14 REMARK 500 ALA A 226 -13.84 -149.66 REMARK 500 PRO A 235 -170.02 -60.50 REMARK 500 ASP A 237 105.78 -52.96 REMARK 500 ALA A 240 -79.09 -49.06 REMARK 500 LEU A 248 -73.63 -96.90 REMARK 500 LYS A 258 -25.52 -36.86 REMARK 500 ILE A 259 -146.42 -66.61 REMARK 500 GLN A 260 144.29 112.81 REMARK 500 ASP A 264 -44.56 -130.84 REMARK 500 GLU A 267 -73.30 -48.88 REMARK 500 VAL A 269 -76.79 -44.63 REMARK 500 ALA A 272 -114.85 -83.93 REMARK 500 LYS A 273 -143.79 46.41 REMARK 500 SER A 283 -178.61 169.87 REMARK 500 ASP A 284 66.62 63.60 REMARK 500 GLU A 285 -84.11 -71.72 REMARK 500 PRO A 287 -125.99 -68.28 REMARK 500 THR A 288 116.14 -4.36 REMARK 500 GLU A 303 -70.89 -42.57 REMARK 500 THR A 314 104.57 100.59 REMARK 500 THR A 360 -163.87 -116.55 REMARK 500 SER A 397 112.50 60.54 REMARK 500 PHE A 423 83.49 -150.39 REMARK 500 PRO A 424 38.93 -78.91 REMARK 500 SER A 439 86.41 2.71 REMARK 500 PRO A 458 69.29 -63.59 REMARK 500 ASP A 482 75.41 49.64 REMARK 500 MET A 543 -62.51 -135.95 REMARK 500 ASP A 544 -51.06 92.30 REMARK 500 ALA A 554 -151.67 69.32 REMARK 500 ASP A 565 3.32 -69.02 REMARK 500 SER A 573 102.86 -59.23 REMARK 500 ASN A 592 -120.59 -77.84 REMARK 500 ASP A 593 -44.24 -139.46 REMARK 500 ASP A 594 -9.99 -58.27 REMARK 500 ASP A 619 -178.21 -61.81 REMARK 500 MET B 1 160.47 43.97 REMARK 500 REMARK 500 THIS ENTRY HAS 159 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 289 TYR A 290 -148.93 REMARK 500 PHE A 553 ALA A 554 141.27 REMARK 500 ASP B 264 ARG B 265 33.36 REMARK 500 GLY B 574 GLY B 575 -37.39 REMARK 500 LYS C 258 ILE C 259 36.51 REMARK 500 ILE C 259 GLN C 260 40.77 REMARK 500 THR C 314 GLY C 315 31.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 ADENOSINE-5'-MONOPHOSPHATE (A): H1 DISORDERED AND BASE ONLY REMARK 600 IS MODELLED REMARK 600 PHOSPHATE ION (PO4): TWO PHOSPHATES MOLECULES MODELLED AT REMARK 600 EACH ACTIVE SITE REMARK 600 URIDINE-5'-MONOPHOSPHATE (U): E7, D1, I1 DISORDERED AND REMARK 600 BASE ONLY IS MODELLED REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1621 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1622 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 1620 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 C 1620 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 1621 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 C 1621 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4AID RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF C. CRESCENTUS PNPASE BOUND TO RNASE E REMARK 900 RECOGNITION PEPTIDE REMARK 900 RELATED ID: 4AIM RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF C. CRESCENTUS PNPASE BOUND TO RNASE E REMARK 900 RECOGNITION PEPTIDE REMARK 999 REMARK 999 SEQUENCE REMARK 999 N-TERMINAL GST TAG, GST TAG REMOVED. DBREF 4AM3 A 1 712 UNP Q9AC32 PNP_CAUCR 1 712 DBREF 4AM3 B 1 712 UNP Q9AC32 PNP_CAUCR 1 712 DBREF 4AM3 C 1 712 UNP Q9AC32 PNP_CAUCR 1 712 DBREF 4AM3 D 1 9 PDB 4AM3 4AM3 1 9 DBREF 4AM3 E 1 9 PDB 4AM3 4AM3 1 9 DBREF 4AM3 H 1 9 PDB 4AM3 4AM3 1 9 DBREF 4AM3 I 1 9 PDB 4AM3 4AM3 1 9 SEQADV 4AM3 GLY A -4 UNP Q9AC32 EXPRESSION TAG SEQADV 4AM3 PRO A -3 UNP Q9AC32 EXPRESSION TAG SEQADV 4AM3 LEU A -2 UNP Q9AC32 EXPRESSION TAG SEQADV 4AM3 GLY A -1 UNP Q9AC32 EXPRESSION TAG SEQADV 4AM3 SER A 0 UNP Q9AC32 EXPRESSION TAG SEQADV 4AM3 GLY B -4 UNP Q9AC32 EXPRESSION TAG SEQADV 4AM3 PRO B -3 UNP Q9AC32 EXPRESSION TAG SEQADV 4AM3 LEU B -2 UNP Q9AC32 EXPRESSION TAG SEQADV 4AM3 GLY B -1 UNP Q9AC32 EXPRESSION TAG SEQADV 4AM3 SER B 0 UNP Q9AC32 EXPRESSION TAG SEQADV 4AM3 GLY C -4 UNP Q9AC32 EXPRESSION TAG SEQADV 4AM3 PRO C -3 UNP Q9AC32 EXPRESSION TAG SEQADV 4AM3 LEU C -2 UNP Q9AC32 EXPRESSION TAG SEQADV 4AM3 GLY C -1 UNP Q9AC32 EXPRESSION TAG SEQADV 4AM3 SER C 0 UNP Q9AC32 EXPRESSION TAG SEQRES 1 A 717 GLY PRO LEU GLY SER MET PHE ASP ILE LYS ARG LYS THR SEQRES 2 A 717 ILE GLU TRP GLY GLY LYS THR LEU VAL LEU GLU THR GLY SEQRES 3 A 717 ARG ILE ALA ARG GLN ALA ASP GLY ALA VAL LEU ALA THR SEQRES 4 A 717 MET GLY GLU THR VAL VAL LEU ALA THR ALA VAL PHE ALA SEQRES 5 A 717 LYS SER GLN LYS PRO GLY GLN ASP PHE PHE PRO LEU THR SEQRES 6 A 717 VAL ASN TYR GLN GLU LYS THR PHE ALA ALA GLY LYS ILE SEQRES 7 A 717 PRO GLY GLY PHE PHE LYS ARG GLU GLY ARG PRO SER GLU SEQRES 8 A 717 LYS GLU THR LEU VAL SER ARG LEU ILE ASP ARG PRO ILE SEQRES 9 A 717 ARG PRO LEU PHE VAL LYS GLY PHE LYS ASN GLU VAL GLN SEQRES 10 A 717 VAL VAL VAL THR VAL LEU GLN HIS ASP LEU GLU ASN ASP SEQRES 11 A 717 PRO ASP ILE LEU GLY MET VAL ALA ALA SER ALA ALA LEU SEQRES 12 A 717 CYS LEU SER GLY ALA PRO PHE MET GLY PRO ILE GLY ALA SEQRES 13 A 717 ALA ARG VAL GLY TRP VAL ASP GLY ALA TYR VAL LEU ASN SEQRES 14 A 717 PRO THR LEU ASP GLU MET LYS GLU SER LYS MET ASP LEU SEQRES 15 A 717 VAL VAL ALA GLY THR ALA ASP ALA VAL MET MET VAL GLU SEQRES 16 A 717 SER GLU ILE GLN GLU LEU SER GLU GLU ILE VAL LEU GLY SEQRES 17 A 717 GLY VAL ASN PHE ALA HIS GLN GLN MET GLN ALA VAL ILE SEQRES 18 A 717 ASP ALA ILE ILE ASP LEU ALA GLU HIS ALA ALA LYS GLU SEQRES 19 A 717 PRO PHE ALA PHE GLU PRO GLU ASP THR ASP ALA ILE LYS SEQRES 20 A 717 ALA LYS MET LYS ASP LEU VAL GLY ALA ASP ILE ALA ALA SEQRES 21 A 717 ALA TYR LYS ILE GLN LYS LYS GLN ASP ARG TYR GLU ALA SEQRES 22 A 717 VAL GLY ALA ALA LYS LYS LYS ALA ILE ALA ALA LEU GLY SEQRES 23 A 717 LEU SER ASP GLU ASN PRO THR GLY TYR ASP PRO LEU LYS SEQRES 24 A 717 LEU GLY ALA ILE PHE LYS GLU LEU GLU ALA ASP VAL VAL SEQRES 25 A 717 ARG ARG GLY ILE LEU ASP THR GLY LEU ARG ILE ASP GLY SEQRES 26 A 717 ARG ASP VAL LYS THR VAL ARG PRO ILE LEU GLY GLU VAL SEQRES 27 A 717 GLY ILE LEU PRO ARG THR HIS GLY SER ALA LEU PHE THR SEQRES 28 A 717 ARG GLY GLU THR GLN ALA ILE VAL VAL ALA THR LEU GLY SEQRES 29 A 717 THR GLY ASP ASP GLU GLN PHE ILE ASP ALA LEU GLU GLY SEQRES 30 A 717 THR TYR LYS GLU SER PHE LEU LEU HIS TYR ASN PHE PRO SEQRES 31 A 717 PRO TYR SER VAL GLY GLU THR GLY ARG MET GLY SER PRO SEQRES 32 A 717 GLY ARG ARG GLU ILE GLY HIS GLY LYS LEU ALA TRP ARG SEQRES 33 A 717 ALA LEU ARG PRO MET LEU PRO THR LYS GLU ASP PHE PRO SEQRES 34 A 717 TYR THR ILE ARG LEU VAL SER GLU ILE THR GLU SER ASN SEQRES 35 A 717 GLY SER SER SER MET ALA THR VAL CYS GLY SER SER LEU SEQRES 36 A 717 ALA MET MET ASP ALA GLY VAL PRO LEU VAL ARG PRO VAL SEQRES 37 A 717 SER GLY ILE ALA MET GLY LEU ILE LEU GLU GLN ASP GLY SEQRES 38 A 717 PHE ALA VAL LEU SER ASP ILE LEU GLY ASP GLU ASP HIS SEQRES 39 A 717 LEU GLY ASP MET ASP PHE LYS VAL ALA GLY THR SER GLU SEQRES 40 A 717 GLY LEU THR SER LEU GLN MET ASP ILE LYS ILE ALA GLY SEQRES 41 A 717 ILE THR PRO ALA ILE MET GLU GLN ALA LEU ALA GLN ALA SEQRES 42 A 717 LYS GLU GLY ARG ALA HIS ILE LEU GLY GLU MET ASN LYS SEQRES 43 A 717 ALA MET ASP ALA PRO ARG ALA ASP VAL GLY ASP PHE ALA SEQRES 44 A 717 PRO LYS ILE GLU THR ILE ASN ILE PRO THR ASP LYS ILE SEQRES 45 A 717 ARG GLU VAL ILE GLY SER GLY GLY LYS VAL ILE ARG GLU SEQRES 46 A 717 ILE VAL ALA THR THR GLY ALA LYS VAL ASP ILE ASN ASP SEQRES 47 A 717 ASP GLY VAL VAL LYS VAL SER ALA SER ASP GLY ALA LYS SEQRES 48 A 717 ILE LYS ALA ALA ILE ASP TRP ILE LYS SER ILE THR ASP SEQRES 49 A 717 GLU ALA GLU VAL GLY LYS ILE TYR ASP GLY LYS VAL VAL SEQRES 50 A 717 LYS VAL VAL ASP PHE GLY ALA PHE VAL ASN PHE PHE GLY SEQRES 51 A 717 ALA LYS ASP GLY LEU VAL HIS VAL SER GLN ILE SER ASN SEQRES 52 A 717 GLU ARG VAL ALA LYS PRO SER ASP VAL LEU LYS GLU GLY SEQRES 53 A 717 GLN MET VAL LYS VAL LYS LEU LEU GLY PHE ASP ASP ARG SEQRES 54 A 717 GLY LYS THR LYS LEU SER MET LYS VAL VAL ASP GLN GLU SEQRES 55 A 717 THR GLY GLU ASP LEU SER LYS LYS GLU ALA ALA ALA GLU SEQRES 56 A 717 GLU ALA SEQRES 1 B 717 GLY PRO LEU GLY SER MET PHE ASP ILE LYS ARG LYS THR SEQRES 2 B 717 ILE GLU TRP GLY GLY LYS THR LEU VAL LEU GLU THR GLY SEQRES 3 B 717 ARG ILE ALA ARG GLN ALA ASP GLY ALA VAL LEU ALA THR SEQRES 4 B 717 MET GLY GLU THR VAL VAL LEU ALA THR ALA VAL PHE ALA SEQRES 5 B 717 LYS SER GLN LYS PRO GLY GLN ASP PHE PHE PRO LEU THR SEQRES 6 B 717 VAL ASN TYR GLN GLU LYS THR PHE ALA ALA GLY LYS ILE SEQRES 7 B 717 PRO GLY GLY PHE PHE LYS ARG GLU GLY ARG PRO SER GLU SEQRES 8 B 717 LYS GLU THR LEU VAL SER ARG LEU ILE ASP ARG PRO ILE SEQRES 9 B 717 ARG PRO LEU PHE VAL LYS GLY PHE LYS ASN GLU VAL GLN SEQRES 10 B 717 VAL VAL VAL THR VAL LEU GLN HIS ASP LEU GLU ASN ASP SEQRES 11 B 717 PRO ASP ILE LEU GLY MET VAL ALA ALA SER ALA ALA LEU SEQRES 12 B 717 CYS LEU SER GLY ALA PRO PHE MET GLY PRO ILE GLY ALA SEQRES 13 B 717 ALA ARG VAL GLY TRP VAL ASP GLY ALA TYR VAL LEU ASN SEQRES 14 B 717 PRO THR LEU ASP GLU MET LYS GLU SER LYS MET ASP LEU SEQRES 15 B 717 VAL VAL ALA GLY THR ALA ASP ALA VAL MET MET VAL GLU SEQRES 16 B 717 SER GLU ILE GLN GLU LEU SER GLU GLU ILE VAL LEU GLY SEQRES 17 B 717 GLY VAL ASN PHE ALA HIS GLN GLN MET GLN ALA VAL ILE SEQRES 18 B 717 ASP ALA ILE ILE ASP LEU ALA GLU HIS ALA ALA LYS GLU SEQRES 19 B 717 PRO PHE ALA PHE GLU PRO GLU ASP THR ASP ALA ILE LYS SEQRES 20 B 717 ALA LYS MET LYS ASP LEU VAL GLY ALA ASP ILE ALA ALA SEQRES 21 B 717 ALA TYR LYS ILE GLN LYS LYS GLN ASP ARG TYR GLU ALA SEQRES 22 B 717 VAL GLY ALA ALA LYS LYS LYS ALA ILE ALA ALA LEU GLY SEQRES 23 B 717 LEU SER ASP GLU ASN PRO THR GLY TYR ASP PRO LEU LYS SEQRES 24 B 717 LEU GLY ALA ILE PHE LYS GLU LEU GLU ALA ASP VAL VAL SEQRES 25 B 717 ARG ARG GLY ILE LEU ASP THR GLY LEU ARG ILE ASP GLY SEQRES 26 B 717 ARG ASP VAL LYS THR VAL ARG PRO ILE LEU GLY GLU VAL SEQRES 27 B 717 GLY ILE LEU PRO ARG THR HIS GLY SER ALA LEU PHE THR SEQRES 28 B 717 ARG GLY GLU THR GLN ALA ILE VAL VAL ALA THR LEU GLY SEQRES 29 B 717 THR GLY ASP ASP GLU GLN PHE ILE ASP ALA LEU GLU GLY SEQRES 30 B 717 THR TYR LYS GLU SER PHE LEU LEU HIS TYR ASN PHE PRO SEQRES 31 B 717 PRO TYR SER VAL GLY GLU THR GLY ARG MET GLY SER PRO SEQRES 32 B 717 GLY ARG ARG GLU ILE GLY HIS GLY LYS LEU ALA TRP ARG SEQRES 33 B 717 ALA LEU ARG PRO MET LEU PRO THR LYS GLU ASP PHE PRO SEQRES 34 B 717 TYR THR ILE ARG LEU VAL SER GLU ILE THR GLU SER ASN SEQRES 35 B 717 GLY SER SER SER MET ALA THR VAL CYS GLY SER SER LEU SEQRES 36 B 717 ALA MET MET ASP ALA GLY VAL PRO LEU VAL ARG PRO VAL SEQRES 37 B 717 SER GLY ILE ALA MET GLY LEU ILE LEU GLU GLN ASP GLY SEQRES 38 B 717 PHE ALA VAL LEU SER ASP ILE LEU GLY ASP GLU ASP HIS SEQRES 39 B 717 LEU GLY ASP MET ASP PHE LYS VAL ALA GLY THR SER GLU SEQRES 40 B 717 GLY LEU THR SER LEU GLN MET ASP ILE LYS ILE ALA GLY SEQRES 41 B 717 ILE THR PRO ALA ILE MET GLU GLN ALA LEU ALA GLN ALA SEQRES 42 B 717 LYS GLU GLY ARG ALA HIS ILE LEU GLY GLU MET ASN LYS SEQRES 43 B 717 ALA MET ASP ALA PRO ARG ALA ASP VAL GLY ASP PHE ALA SEQRES 44 B 717 PRO LYS ILE GLU THR ILE ASN ILE PRO THR ASP LYS ILE SEQRES 45 B 717 ARG GLU VAL ILE GLY SER GLY GLY LYS VAL ILE ARG GLU SEQRES 46 B 717 ILE VAL ALA THR THR GLY ALA LYS VAL ASP ILE ASN ASP SEQRES 47 B 717 ASP GLY VAL VAL LYS VAL SER ALA SER ASP GLY ALA LYS SEQRES 48 B 717 ILE LYS ALA ALA ILE ASP TRP ILE LYS SER ILE THR ASP SEQRES 49 B 717 GLU ALA GLU VAL GLY LYS ILE TYR ASP GLY LYS VAL VAL SEQRES 50 B 717 LYS VAL VAL ASP PHE GLY ALA PHE VAL ASN PHE PHE GLY SEQRES 51 B 717 ALA LYS ASP GLY LEU VAL HIS VAL SER GLN ILE SER ASN SEQRES 52 B 717 GLU ARG VAL ALA LYS PRO SER ASP VAL LEU LYS GLU GLY SEQRES 53 B 717 GLN MET VAL LYS VAL LYS LEU LEU GLY PHE ASP ASP ARG SEQRES 54 B 717 GLY LYS THR LYS LEU SER MET LYS VAL VAL ASP GLN GLU SEQRES 55 B 717 THR GLY GLU ASP LEU SER LYS LYS GLU ALA ALA ALA GLU SEQRES 56 B 717 GLU ALA SEQRES 1 C 717 GLY PRO LEU GLY SER MET PHE ASP ILE LYS ARG LYS THR SEQRES 2 C 717 ILE GLU TRP GLY GLY LYS THR LEU VAL LEU GLU THR GLY SEQRES 3 C 717 ARG ILE ALA ARG GLN ALA ASP GLY ALA VAL LEU ALA THR SEQRES 4 C 717 MET GLY GLU THR VAL VAL LEU ALA THR ALA VAL PHE ALA SEQRES 5 C 717 LYS SER GLN LYS PRO GLY GLN ASP PHE PHE PRO LEU THR SEQRES 6 C 717 VAL ASN TYR GLN GLU LYS THR PHE ALA ALA GLY LYS ILE SEQRES 7 C 717 PRO GLY GLY PHE PHE LYS ARG GLU GLY ARG PRO SER GLU SEQRES 8 C 717 LYS GLU THR LEU VAL SER ARG LEU ILE ASP ARG PRO ILE SEQRES 9 C 717 ARG PRO LEU PHE VAL LYS GLY PHE LYS ASN GLU VAL GLN SEQRES 10 C 717 VAL VAL VAL THR VAL LEU GLN HIS ASP LEU GLU ASN ASP SEQRES 11 C 717 PRO ASP ILE LEU GLY MET VAL ALA ALA SER ALA ALA LEU SEQRES 12 C 717 CYS LEU SER GLY ALA PRO PHE MET GLY PRO ILE GLY ALA SEQRES 13 C 717 ALA ARG VAL GLY TRP VAL ASP GLY ALA TYR VAL LEU ASN SEQRES 14 C 717 PRO THR LEU ASP GLU MET LYS GLU SER LYS MET ASP LEU SEQRES 15 C 717 VAL VAL ALA GLY THR ALA ASP ALA VAL MET MET VAL GLU SEQRES 16 C 717 SER GLU ILE GLN GLU LEU SER GLU GLU ILE VAL LEU GLY SEQRES 17 C 717 GLY VAL ASN PHE ALA HIS GLN GLN MET GLN ALA VAL ILE SEQRES 18 C 717 ASP ALA ILE ILE ASP LEU ALA GLU HIS ALA ALA LYS GLU SEQRES 19 C 717 PRO PHE ALA PHE GLU PRO GLU ASP THR ASP ALA ILE LYS SEQRES 20 C 717 ALA LYS MET LYS ASP LEU VAL GLY ALA ASP ILE ALA ALA SEQRES 21 C 717 ALA TYR LYS ILE GLN LYS LYS GLN ASP ARG TYR GLU ALA SEQRES 22 C 717 VAL GLY ALA ALA LYS LYS LYS ALA ILE ALA ALA LEU GLY SEQRES 23 C 717 LEU SER ASP GLU ASN PRO THR GLY TYR ASP PRO LEU LYS SEQRES 24 C 717 LEU GLY ALA ILE PHE LYS GLU LEU GLU ALA ASP VAL VAL SEQRES 25 C 717 ARG ARG GLY ILE LEU ASP THR GLY LEU ARG ILE ASP GLY SEQRES 26 C 717 ARG ASP VAL LYS THR VAL ARG PRO ILE LEU GLY GLU VAL SEQRES 27 C 717 GLY ILE LEU PRO ARG THR HIS GLY SER ALA LEU PHE THR SEQRES 28 C 717 ARG GLY GLU THR GLN ALA ILE VAL VAL ALA THR LEU GLY SEQRES 29 C 717 THR GLY ASP ASP GLU GLN PHE ILE ASP ALA LEU GLU GLY SEQRES 30 C 717 THR TYR LYS GLU SER PHE LEU LEU HIS TYR ASN PHE PRO SEQRES 31 C 717 PRO TYR SER VAL GLY GLU THR GLY ARG MET GLY SER PRO SEQRES 32 C 717 GLY ARG ARG GLU ILE GLY HIS GLY LYS LEU ALA TRP ARG SEQRES 33 C 717 ALA LEU ARG PRO MET LEU PRO THR LYS GLU ASP PHE PRO SEQRES 34 C 717 TYR THR ILE ARG LEU VAL SER GLU ILE THR GLU SER ASN SEQRES 35 C 717 GLY SER SER SER MET ALA THR VAL CYS GLY SER SER LEU SEQRES 36 C 717 ALA MET MET ASP ALA GLY VAL PRO LEU VAL ARG PRO VAL SEQRES 37 C 717 SER GLY ILE ALA MET GLY LEU ILE LEU GLU GLN ASP GLY SEQRES 38 C 717 PHE ALA VAL LEU SER ASP ILE LEU GLY ASP GLU ASP HIS SEQRES 39 C 717 LEU GLY ASP MET ASP PHE LYS VAL ALA GLY THR SER GLU SEQRES 40 C 717 GLY LEU THR SER LEU GLN MET ASP ILE LYS ILE ALA GLY SEQRES 41 C 717 ILE THR PRO ALA ILE MET GLU GLN ALA LEU ALA GLN ALA SEQRES 42 C 717 LYS GLU GLY ARG ALA HIS ILE LEU GLY GLU MET ASN LYS SEQRES 43 C 717 ALA MET ASP ALA PRO ARG ALA ASP VAL GLY ASP PHE ALA SEQRES 44 C 717 PRO LYS ILE GLU THR ILE ASN ILE PRO THR ASP LYS ILE SEQRES 45 C 717 ARG GLU VAL ILE GLY SER GLY GLY LYS VAL ILE ARG GLU SEQRES 46 C 717 ILE VAL ALA THR THR GLY ALA LYS VAL ASP ILE ASN ASP SEQRES 47 C 717 ASP GLY VAL VAL LYS VAL SER ALA SER ASP GLY ALA LYS SEQRES 48 C 717 ILE LYS ALA ALA ILE ASP TRP ILE LYS SER ILE THR ASP SEQRES 49 C 717 GLU ALA GLU VAL GLY LYS ILE TYR ASP GLY LYS VAL VAL SEQRES 50 C 717 LYS VAL VAL ASP PHE GLY ALA PHE VAL ASN PHE PHE GLY SEQRES 51 C 717 ALA LYS ASP GLY LEU VAL HIS VAL SER GLN ILE SER ASN SEQRES 52 C 717 GLU ARG VAL ALA LYS PRO SER ASP VAL LEU LYS GLU GLY SEQRES 53 C 717 GLN MET VAL LYS VAL LYS LEU LEU GLY PHE ASP ASP ARG SEQRES 54 C 717 GLY LYS THR LYS LEU SER MET LYS VAL VAL ASP GLN GLU SEQRES 55 C 717 THR GLY GLU ASP LEU SER LYS LYS GLU ALA ALA ALA GLU SEQRES 56 C 717 GLU ALA SEQRES 1 D 9 U A A C U U U G G SEQRES 1 E 9 U A A C U U U G G SEQRES 1 H 9 U A A C U U U G G SEQRES 1 I 9 U A A C U U U G G HET PO4 A1621 5 HET PO4 A1622 5 HET PO4 B1620 5 HET PO4 B1621 5 HET PO4 C1620 5 HET PO4 C1621 5 HETNAM PO4 PHOSPHATE ION FORMUL 8 PO4 6(O4 P 3-) FORMUL 14 HOH *54(H2 O) HELIX 1 1 THR A 67 GLY A 71 5 5 HELIX 2 2 SER A 85 ARG A 100 1 16 HELIX 3 3 ASP A 125 CYS A 139 1 15 HELIX 4 4 THR A 166 LYS A 171 1 6 HELIX 5 5 SER A 197 MET A 212 1 16 HELIX 6 6 MET A 212 ALA A 227 1 16 HELIX 7 7 THR A 238 ILE A 259 1 22 HELIX 8 8 ARG A 265 ALA A 272 1 8 HELIX 9 9 ALA A 272 LEU A 280 1 9 HELIX 10 10 ASP A 291 ASP A 313 1 23 HELIX 11 11 THR A 360 GLU A 364 5 5 HELIX 12 12 PRO A 385 GLY A 390 5 6 HELIX 13 13 GLY A 399 ARG A 414 1 16 HELIX 14 14 PRO A 415 LEU A 417 5 3 HELIX 15 15 SER A 439 GLY A 456 1 18 HELIX 16 16 GLY A 485 GLY A 491 1 7 HELIX 17 17 THR A 517 ASN A 540 1 24 HELIX 18 18 PRO A 563 ASP A 565 5 3 HELIX 19 19 LYS A 566 GLY A 572 1 7 HELIX 20 20 GLY A 575 GLY A 586 1 12 HELIX 21 21 ASP A 603 ASP A 619 1 17 HELIX 22 22 THR B 67 GLY B 71 5 5 HELIX 23 23 SER B 85 ARG B 100 1 16 HELIX 24 24 ASP B 125 CYS B 139 1 15 HELIX 25 25 THR B 166 LYS B 171 1 6 HELIX 26 26 SER B 197 MET B 212 1 16 HELIX 27 27 MET B 212 GLU B 224 1 13 HELIX 28 28 THR B 238 ALA B 254 1 17 HELIX 29 29 ASP B 264 GLY B 281 1 18 HELIX 30 30 LEU B 293 ASP B 313 1 21 HELIX 31 31 THR B 360 GLU B 364 5 5 HELIX 32 32 PRO B 385 GLY B 390 5 6 HELIX 33 33 GLY B 399 ARG B 414 1 16 HELIX 34 34 PRO B 415 LEU B 417 5 3 HELIX 35 35 THR B 419 PHE B 423 5 5 HELIX 36 36 SER B 439 GLY B 456 1 18 HELIX 37 37 THR B 517 LYS B 541 1 25 HELIX 38 38 PRO B 563 ASP B 565 5 3 HELIX 39 39 LYS B 566 GLY B 572 1 7 HELIX 40 40 GLY B 575 GLY B 586 1 12 HELIX 41 41 ASP B 603 ASP B 619 1 17 HELIX 42 42 THR C 67 GLY C 71 5 5 HELIX 43 43 SER C 85 ARG C 100 1 16 HELIX 44 44 ASP C 125 CYS C 139 1 15 HELIX 45 45 ASP C 168 GLU C 172 5 5 HELIX 46 46 SER C 197 MET C 212 1 16 HELIX 47 47 MET C 212 GLU C 224 1 13 HELIX 48 48 ASP C 237 ASP C 247 1 11 HELIX 49 49 VAL C 249 ALA C 256 1 8 HELIX 50 50 TYR C 266 LEU C 280 1 15 HELIX 51 51 LEU C 293 ASP C 313 1 21 HELIX 52 52 THR C 360 GLU C 364 5 5 HELIX 53 53 PRO C 385 GLY C 390 5 6 HELIX 54 54 GLY C 399 ARG C 414 1 16 HELIX 55 55 PRO C 415 LEU C 417 5 3 HELIX 56 56 SER C 439 GLY C 456 1 18 HELIX 57 57 GLY C 485 GLY C 491 1 7 HELIX 58 58 THR C 517 LYS C 541 1 25 HELIX 59 59 PRO C 563 ASP C 565 5 3 HELIX 60 60 LYS C 566 GLY C 572 1 7 HELIX 61 61 GLY C 575 GLY C 586 1 12 HELIX 62 62 ASP C 603 LYS C 615 1 13 SHEET 1 AA 6 GLU A 10 TRP A 11 0 SHEET 2 AA 6 LYS A 14 GLU A 19 -1 O LYS A 14 N TRP A 11 SHEET 3 AA 6 GLY A 29 MET A 35 -1 O LEU A 32 N GLU A 19 SHEET 4 AA 6 THR A 38 PHE A 46 -1 O THR A 38 N MET A 35 SHEET 5 AA 6 VAL A 111 GLN A 119 -1 O GLN A 112 N VAL A 45 SHEET 6 AA 6 LEU A 59 GLU A 65 1 O THR A 60 N VAL A 113 SHEET 1 AB 8 ALA A 160 LEU A 163 0 SHEET 2 AB 8 GLY A 150 VAL A 157 -1 O GLY A 155 N VAL A 162 SHEET 3 AB 8 MET A 175 GLY A 181 -1 O LEU A 177 N VAL A 154 SHEET 4 AB 8 VAL A 186 ILE A 193 -1 N MET A 187 O ALA A 180 SHEET 5 AB 8 GLY A 503 ILE A 511 -1 O THR A 505 N ILE A 193 SHEET 6 AB 8 MET A 493 THR A 500 -1 O ASP A 494 N ASP A 510 SHEET 7 AB 8 SER A 464 LEU A 472 -1 O SER A 464 N GLY A 499 SHEET 8 AB 8 PHE A 477 SER A 481 -1 O ALA A 478 N ILE A 471 SHEET 1 AC 5 ILE A 329 VAL A 333 0 SHEET 2 AC 5 GLY A 341 ARG A 347 -1 O LEU A 344 N GLU A 332 SHEET 3 AC 5 THR A 350 GLY A 359 -1 O THR A 350 N ARG A 347 SHEET 4 AC 5 THR A 426 GLU A 435 -1 O THR A 426 N GLY A 359 SHEET 5 AC 5 PHE A 378 ASN A 383 1 O LEU A 379 N LEU A 429 SHEET 1 AD 2 GLN A 365 ALA A 369 0 SHEET 2 AD 2 GLY A 372 GLU A 376 -1 O GLY A 372 N ALA A 369 SHEET 1 AE 3 LYS A 556 ASN A 561 0 SHEET 2 AE 3 VAL A 596 ALA A 601 -1 O VAL A 597 N ILE A 560 SHEET 3 AE 3 LYS A 588 ILE A 591 -1 O LYS A 588 N SER A 600 SHEET 1 BA 6 GLU B 10 TRP B 11 0 SHEET 2 BA 6 LYS B 14 GLU B 19 -1 O LYS B 14 N TRP B 11 SHEET 3 BA 6 GLY B 29 MET B 35 -1 O LEU B 32 N GLU B 19 SHEET 4 BA 6 THR B 38 PHE B 46 -1 O THR B 38 N MET B 35 SHEET 5 BA 6 VAL B 111 GLN B 119 -1 O GLN B 112 N VAL B 45 SHEET 6 BA 6 LEU B 59 GLU B 65 1 O THR B 60 N VAL B 113 SHEET 1 BB 8 ALA B 160 LEU B 163 0 SHEET 2 BB 8 GLY B 150 VAL B 157 -1 O GLY B 155 N VAL B 162 SHEET 3 BB 8 MET B 175 GLY B 181 -1 O LEU B 177 N VAL B 154 SHEET 4 BB 8 VAL B 186 ILE B 193 -1 N MET B 187 O ALA B 180 SHEET 5 BB 8 GLY B 503 ILE B 511 -1 O THR B 505 N ILE B 193 SHEET 6 BB 8 MET B 493 THR B 500 -1 O ASP B 494 N ASP B 510 SHEET 7 BB 8 SER B 464 GLU B 473 -1 O SER B 464 N GLY B 499 SHEET 8 BB 8 GLY B 476 LEU B 480 -1 O GLY B 476 N GLU B 473 SHEET 1 BC 5 ILE B 329 VAL B 333 0 SHEET 2 BC 5 GLY B 341 ARG B 347 -1 O LEU B 344 N GLU B 332 SHEET 3 BC 5 THR B 350 GLY B 359 -1 O THR B 350 N ARG B 347 SHEET 4 BC 5 THR B 426 GLU B 435 -1 O THR B 426 N GLY B 359 SHEET 5 BC 5 PHE B 378 ASN B 383 1 O LEU B 379 N LEU B 429 SHEET 1 BD 2 GLN B 365 ILE B 367 0 SHEET 2 BD 2 TYR B 374 GLU B 376 -1 O TYR B 374 N ILE B 367 SHEET 1 BE 3 LYS B 556 ASN B 561 0 SHEET 2 BE 3 VAL B 596 ALA B 601 -1 O VAL B 597 N ILE B 560 SHEET 3 BE 3 LYS B 588 ILE B 591 -1 O LYS B 588 N SER B 600 SHEET 1 CA 6 THR C 8 TRP C 11 0 SHEET 2 CA 6 LYS C 14 GLU C 19 -1 O LYS C 14 N TRP C 11 SHEET 3 CA 6 GLY C 29 MET C 35 -1 O LEU C 32 N GLU C 19 SHEET 4 CA 6 THR C 38 PHE C 46 -1 O THR C 38 N MET C 35 SHEET 5 CA 6 VAL C 111 GLN C 119 -1 O GLN C 112 N VAL C 45 SHEET 6 CA 6 LEU C 59 GLU C 65 1 O THR C 60 N VAL C 113 SHEET 1 CB 8 ALA C 160 LEU C 163 0 SHEET 2 CB 8 GLY C 150 VAL C 157 -1 O GLY C 155 N VAL C 162 SHEET 3 CB 8 MET C 175 GLY C 181 -1 O LEU C 177 N VAL C 154 SHEET 4 CB 8 VAL C 186 ILE C 193 -1 N MET C 187 O ALA C 180 SHEET 5 CB 8 GLY C 503 ILE C 511 -1 O THR C 505 N ILE C 193 SHEET 6 CB 8 MET C 493 THR C 500 -1 O ASP C 494 N ASP C 510 SHEET 7 CB 8 SER C 464 GLU C 473 -1 O SER C 464 N GLY C 499 SHEET 8 CB 8 GLY C 476 LEU C 480 -1 O GLY C 476 N GLU C 473 SHEET 1 CC 5 ILE C 329 VAL C 333 0 SHEET 2 CC 5 GLY C 341 ARG C 347 -1 O LEU C 344 N GLU C 332 SHEET 3 CC 5 THR C 350 GLY C 359 -1 O THR C 350 N ARG C 347 SHEET 4 CC 5 THR C 426 GLU C 435 -1 O THR C 426 N GLY C 359 SHEET 5 CC 5 PHE C 378 ASN C 383 1 O LEU C 379 N LEU C 429 SHEET 1 CD 2 GLN C 365 ALA C 369 0 SHEET 2 CD 2 GLY C 372 GLU C 376 -1 O GLY C 372 N ALA C 369 SHEET 1 CE 3 LYS C 556 ASN C 561 0 SHEET 2 CE 3 VAL C 596 ALA C 601 -1 O VAL C 597 N ILE C 560 SHEET 3 CE 3 LYS C 588 ILE C 591 -1 O LYS C 588 N SER C 600 CISPEP 1 ASP A 3 ILE A 4 0 5.87 CISPEP 2 GLY A 147 PRO A 148 0 0.26 CISPEP 3 GLN A 260 LYS A 261 0 -28.78 CISPEP 4 LYS A 262 GLN A 263 0 -4.99 CISPEP 5 GLN A 263 ASP A 264 0 -2.30 CISPEP 6 ASP A 264 ARG A 265 0 -15.46 CISPEP 7 SER A 283 ASP A 284 0 -18.19 CISPEP 8 ASP A 284 GLU A 285 0 8.27 CISPEP 9 THR A 288 GLY A 289 0 -3.05 CISPEP 10 ALA A 554 PRO A 555 0 -16.18 CISPEP 11 ASP B 3 ILE B 4 0 8.60 CISPEP 12 TYR B 257 LYS B 258 0 -3.03 CISPEP 13 ILE B 259 GLN B 260 0 -17.36 CISPEP 14 LYS B 261 LYS B 262 0 -1.27 CISPEP 15 ASP B 284 GLU B 285 0 8.84 CISPEP 16 GLU B 285 ASN B 286 0 7.47 CISPEP 17 ASN B 286 PRO B 287 0 -10.37 CISPEP 18 THR B 288 GLY B 289 0 -0.21 CISPEP 19 THR B 314 GLY B 315 0 26.19 CISPEP 20 ASN B 592 ASP B 593 0 -13.92 CISPEP 21 ASP C 3 ILE C 4 0 5.65 CISPEP 22 PRO C 235 GLU C 236 0 18.11 CISPEP 23 SER C 283 ASP C 284 0 9.93 CISPEP 24 ASP C 284 GLU C 285 0 -1.92 CISPEP 25 THR C 288 GLY C 289 0 -4.98 CISPEP 26 ASN C 592 ASP C 593 0 -5.78 SITE 1 AC1 8 ARG A 401 HIS A 405 SER A 439 SER A 440 SITE 2 AC1 8 SER A 441 LYS A 496 PO4 A1622 HOH A2018 SITE 1 AC2 4 SER A 436 GLY A 438 PO4 A1621 HOH A2019 SITE 1 AC3 8 ARG B 401 HIS B 405 GLY B 438 SER B 439 SITE 2 AC3 8 SER B 440 SER B 441 LYS B 496 PO4 B1621 SITE 1 AC4 8 ARG C 401 HIS C 405 SER C 439 SER C 440 SITE 2 AC4 8 SER C 441 LYS C 496 PO4 C1621 HOH C2017 SITE 1 AC5 4 SER B 436 GLY B 438 GLY B 485 PO4 B1620 SITE 1 AC6 5 ARG C 401 SER C 436 GLY C 438 PO4 C1620 SITE 2 AC6 5 HOH C2022 CRYST1 93.640 112.060 236.220 90.00 90.00 90.00 P 2 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010679 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008924 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004233 0.00000