HEADER HYDROLASE 13-MAR-12 4AMT TITLE CRYSTAL STRUCTURE AT 2.6A OF HUMAN PRORENIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RENIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PRORENIN, ANGIOTENSINOGENASE; COMPND 5 EC: 3.4.23.15; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: HOMO SAPIENS; SOURCE 6 EXPRESSION_SYSTEM_COMMON: HUMAN; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 9606; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: HEK293 EBNA; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PCEP4 KEYWDS HYDROLASE, HORMONE EXPDTA X-RAY DIFFRACTION AUTHOR A.ZHOU REVDAT 3 20-DEC-23 4AMT 1 HETSYN REVDAT 2 29-JUL-20 4AMT 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE ATOM REVDAT 1 20-MAR-13 4AMT 0 JRNL AUTH A.ZHOU JRNL TITL THE CRYSTAL STRUCTURE OF PRORENIN JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 3 NUMBER OF REFLECTIONS : 21623 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.266 REMARK 3 R VALUE (WORKING SET) : 0.264 REMARK 3 FREE R VALUE : 0.300 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1162 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1607 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.12 REMARK 3 BIN R VALUE (WORKING SET) : 0.4140 REMARK 3 BIN FREE R VALUE SET COUNT : 86 REMARK 3 BIN FREE R VALUE : 0.4680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2716 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 74 REMARK 3 SOLVENT ATOMS : 9 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 80.37 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.98000 REMARK 3 B22 (A**2) : -4.98000 REMARK 3 B33 (A**2) : 9.95000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.364 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.287 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.306 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 32.726 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.920 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.898 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2852 ; 0.007 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1924 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3863 ; 1.098 ; 1.990 REMARK 3 BOND ANGLES OTHERS (DEGREES): 4663 ; 0.778 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 345 ; 7.859 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 116 ;31.439 ;23.448 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 466 ;14.789 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;17.101 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 437 ; 0.060 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3085 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 588 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1722 ; 0.242 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 717 ; 0.025 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2781 ; 0.461 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1130 ; 1.169 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1082 ; 1.885 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 6 A 383 REMARK 3 ORIGIN FOR THE GROUP (A): -20.9138 2.2415 12.8802 REMARK 3 T TENSOR REMARK 3 T11: 0.6258 T22: 0.6553 REMARK 3 T33: 0.8953 T12: 0.0697 REMARK 3 T13: -0.1099 T23: -0.0076 REMARK 3 L TENSOR REMARK 3 L11: 1.6065 L22: 6.4287 REMARK 3 L33: 1.9469 L12: 0.7297 REMARK 3 L13: 0.7883 L23: 1.7963 REMARK 3 S TENSOR REMARK 3 S11: 0.2378 S12: -0.1073 S13: -1.1690 REMARK 3 S21: -0.0125 S22: 0.1707 S23: -0.2994 REMARK 3 S31: 0.2193 S32: 0.1791 S33: -0.4086 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4AMT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-MAR-12. REMARK 100 THE DEPOSITION ID IS D_1290051677. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 300 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9763 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : CCP4 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 22788 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 44.690 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.5 REMARK 200 DATA REDUNDANCY : 4.600 REMARK 200 R MERGE (I) : 0.07700 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.74 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 4.60 REMARK 200 R MERGE FOR SHELL (I) : 0.71800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CCP4 REMARK 200 STARTING MODEL: PDB ENTRY 2V0Z REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.82 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0 M LITHIUM SULFATE, 0.1 M CITRATE REMARK 280 PH 5.6, 0.5 M AMMONIUM SULFATE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y,Z REMARK 290 7555 -Y+1/2,X,Z+3/4 REMARK 290 8555 Y,-X+1/2,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 70.66000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 70.66000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 37.92500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 70.66000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 18.96250 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 70.66000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 56.88750 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 70.66000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 70.66000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 37.92500 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 70.66000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 56.88750 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 70.66000 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 18.96250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5980 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 30840 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -118.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 1 REMARK 465 PRO A 2 REMARK 465 THR A 3 REMARK 465 ASP A 4 REMARK 465 THR A 5 REMARK 465 TRP A 37 REMARK 465 SER A 38 REMARK 465 GLN A 39 REMARK 465 PRO A 40 REMARK 465 MET A 41 REMARK 465 LYS A 42 REMARK 465 ARG A 43 REMARK 465 LEU A 44 REMARK 465 THR A 45 REMARK 465 LEU A 46 REMARK 465 GLY A 47 REMARK 465 ASN A 48 REMARK 465 THR A 49 REMARK 465 THR A 50 REMARK 465 SER A 51 REMARK 465 SER A 52 REMARK 465 VAL A 53 REMARK 465 SER A 209 REMARK 465 GLU A 210 REMARK 465 ASN A 211 REMARK 465 SER A 212 REMARK 465 GLN A 213 REMARK 465 SER A 214 REMARK 465 GLN A 330 REMARK 465 GLU A 331 REMARK 465 SER A 332 REMARK 465 TYR A 333 REMARK 465 SER A 334 REMARK 465 SER A 335 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 72 C - N - CD ANGL. DEV. = -17.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 35 6.06 -63.85 REMARK 500 THR A 56 109.61 -168.45 REMARK 500 PRO A 72 127.47 17.03 REMARK 500 ARG A 96 -137.86 52.90 REMARK 500 ASN A 118 -67.61 -144.06 REMARK 500 LEU A 160 -72.13 -56.39 REMARK 500 GLN A 178 31.91 -99.32 REMARK 500 ILE A 186 -36.45 -36.24 REMARK 500 LEU A 258 -62.31 -97.15 REMARK 500 ALA A 342 34.84 -96.88 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 THR A 71 PRO A 72 -104.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1BBS RELATED DB: PDB REMARK 900 RENIN REMARK 900 RELATED ID: 1BIL RELATED DB: PDB REMARK 900 RELATED ID: 1BIM RELATED DB: PDB REMARK 900 RELATED ID: 1HRN RELATED DB: PDB REMARK 900 RENIN COMPLEXED WITH POLYHYDROXYMONOAMIDE INHIBITOR BILA 980 REMARK 900 RELATED ID: 1RNE RELATED DB: PDB REMARK 900 RENIN (ACTIVATED, GLYCOSYLATED, INHIBITED) COMPLEX WITH CGP 38'560 REMARK 900 RELATED ID: 2BKS RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RENIN-PF00074777 COMPLEX REMARK 900 RELATED ID: 2BKT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RENIN-PF00257567 COMPLEX REMARK 900 RELATED ID: 2FS4 RELATED DB: PDB REMARK 900 KETOPIPERAZINE-BASED RENIN INHIBITORS: OPTIMIZATION OF THEC RING REMARK 900 RELATED ID: 2G1N RELATED DB: PDB REMARK 900 KETOPIPERAZINE-BASED RENIN INHIBITORS: OPTIMIZATION OF THE "C" RING REMARK 900 RELATED ID: 2G1O RELATED DB: PDB REMARK 900 KETOPIPERAZINE-BASED RENIN INHIBITORS: OPTIMIZATION OF THE "C" RING REMARK 900 RELATED ID: 2G1R RELATED DB: PDB REMARK 900 KETOPIPERAZINE-BASED RENIN INHIBITORS: OPTIMIZATION OF THEC RING REMARK 900 RELATED ID: 2G1S RELATED DB: PDB REMARK 900 KETOPIPERAZINE-BASED RENIN INHIBITORS: OPTIMIZATION OF THEC RING REMARK 900 RELATED ID: 2G1Y RELATED DB: PDB REMARK 900 KETOPIPERAZINE-BASED RENIN INHIBITORS: OPTIMIZATION OF THE "C" RING REMARK 900 RELATED ID: 2G20 RELATED DB: PDB REMARK 900 KETOPIPERAZINE-BASED RENIN INHIBITORS: OPTIMIZATION OF THEC RING REMARK 900 RELATED ID: 2G21 RELATED DB: PDB REMARK 900 KETOPIPERAZINE-BASED RENIN INHIBITORS: OPTIMIZATION OF THE "C" RING REMARK 900 RELATED ID: 2G22 RELATED DB: PDB REMARK 900 KETOPIPERAZINE-BASED RENIN INHIBITORS: OPTIMIZATION OF THE "C" RING REMARK 900 RELATED ID: 2G24 RELATED DB: PDB REMARK 900 KETOPIPERAZINE-BASED RENIN INHIBITORS: OPTIMIZATION OF THE "C" RING REMARK 900 RELATED ID: 2G26 RELATED DB: PDB REMARK 900 KETOPIPERAZINE-BASED RENIN INHIBITORS: OPTIMIZATION OF THE "C" RING REMARK 900 RELATED ID: 2G27 RELATED DB: PDB REMARK 900 KETOPIPERAZINE-BASED RENIN INHIBITORS: OPTIMIZATION OF THE "C" RING REMARK 900 RELATED ID: 2REN RELATED DB: PDB REMARK 900 RENIN REMARK 900 RELATED ID: 2V0Z RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RENIN WITH INHIBITOR 10 (ALISKIREN) REMARK 900 RELATED ID: 2V10 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RENIN WITH INHIBITOR 9 REMARK 900 RELATED ID: 2V11 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RENIN WITH INHIBITOR 6 REMARK 900 RELATED ID: 2V12 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RENIN WITH INHIBITOR 8 REMARK 900 RELATED ID: 2V13 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RENIN WITH INHIBITOR 7 REMARK 900 RELATED ID: 2V16 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RENIN WITH INHIBITOR 3 REMARK 900 RELATED ID: 2X0B RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF HUMAN ANGIOTENSINOGEN COMPLEXED WITH RENIN DBREF 4AMT A 1 383 UNP P00797 RENI_HUMAN 24 406 SEQRES 1 A 383 LEU PRO THR ASP THR THR THR PHE LYS ARG ILE PHE LEU SEQRES 2 A 383 LYS ARG MET PRO SER ILE ARG GLU SER LEU LYS GLU ARG SEQRES 3 A 383 GLY VAL ASP MET ALA ARG LEU GLY PRO GLU TRP SER GLN SEQRES 4 A 383 PRO MET LYS ARG LEU THR LEU GLY ASN THR THR SER SER SEQRES 5 A 383 VAL ILE LEU THR ASN TYR MET ASP THR GLN TYR TYR GLY SEQRES 6 A 383 GLU ILE GLY ILE GLY THR PRO PRO GLN THR PHE LYS VAL SEQRES 7 A 383 VAL PHE ASP THR GLY SER SER ASN VAL TRP VAL PRO SER SEQRES 8 A 383 SER LYS CYS SER ARG LEU TYR THR ALA CYS VAL TYR HIS SEQRES 9 A 383 LYS LEU PHE ASP ALA SER ASP SER SER SER TYR LYS HIS SEQRES 10 A 383 ASN GLY THR GLU LEU THR LEU ARG TYR SER THR GLY THR SEQRES 11 A 383 VAL SER GLY PHE LEU SER GLN ASP ILE ILE THR VAL GLY SEQRES 12 A 383 GLY ILE THR VAL THR GLN MET PHE GLY GLU VAL THR GLU SEQRES 13 A 383 MET PRO ALA LEU PRO PHE MET LEU ALA GLU PHE ASP GLY SEQRES 14 A 383 VAL VAL GLY MET GLY PHE ILE GLU GLN ALA ILE GLY ARG SEQRES 15 A 383 VAL THR PRO ILE PHE ASP ASN ILE ILE SER GLN GLY VAL SEQRES 16 A 383 LEU LYS GLU ASP VAL PHE SER PHE TYR TYR ASN ARG ASP SEQRES 17 A 383 SER GLU ASN SER GLN SER LEU GLY GLY GLN ILE VAL LEU SEQRES 18 A 383 GLY GLY SER ASP PRO GLN HIS TYR GLU GLY ASN PHE HIS SEQRES 19 A 383 TYR ILE ASN LEU ILE LYS THR GLY VAL TRP GLN ILE GLN SEQRES 20 A 383 MET LYS GLY VAL SER VAL GLY SER SER THR LEU LEU CYS SEQRES 21 A 383 GLU ASP GLY CYS LEU ALA LEU VAL ASP THR GLY ALA SER SEQRES 22 A 383 TYR ILE SER GLY SER THR SER SER ILE GLU LYS LEU MET SEQRES 23 A 383 GLU ALA LEU GLY ALA LYS LYS ARG LEU PHE ASP TYR VAL SEQRES 24 A 383 VAL LYS CYS ASN GLU GLY PRO THR LEU PRO ASP ILE SER SEQRES 25 A 383 PHE HIS LEU GLY GLY LYS GLU TYR THR LEU THR SER ALA SEQRES 26 A 383 ASP TYR VAL PHE GLN GLU SER TYR SER SER LYS LYS LEU SEQRES 27 A 383 CYS THR LEU ALA ILE HIS ALA MET ASP ILE PRO PRO PRO SEQRES 28 A 383 THR GLY PRO THR TRP ALA LEU GLY ALA THR PHE ILE ARG SEQRES 29 A 383 LYS PHE TYR THR GLU PHE ASP ARG ARG ASN ASN ARG ILE SEQRES 30 A 383 GLY PHE ALA LEU ALA ARG MODRES 4AMT ASN A 118 ASN GLYCOSYLATION SITE HET NAG B 1 14 HET NAG B 2 14 HET BMA B 3 11 HET FUC B 4 10 HET SO4 A1384 5 HET SO4 A1385 5 HET SO4 A1386 5 HET SO4 A1387 5 HET SO4 A1388 5 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM BMA BETA-D-MANNOPYRANOSE HETNAM FUC ALPHA-L-FUCOPYRANOSE HETNAM SO4 SULFATE ION HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN BMA BETA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN FUC ALPHA-L-FUCOSE; 6-DEOXY-ALPHA-L-GALACTOPYRANOSE; L- HETSYN 2 FUC FUCOSE; FUCOSE FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 2 BMA C6 H12 O6 FORMUL 2 FUC C6 H12 O5 FORMUL 3 SO4 5(O4 S 2-) FORMUL 8 HOH *9(H2 O) HELIX 1 1 SER A 18 GLY A 27 1 10 HELIX 2 2 SER A 95 THR A 99 5 5 HELIX 3 3 ASP A 108 SER A 112 5 5 HELIX 4 4 PRO A 158 MET A 163 1 6 HELIX 5 5 PHE A 175 ALA A 179 5 5 HELIX 6 6 PRO A 185 GLN A 193 1 9 HELIX 7 7 ASP A 225 GLN A 227 5 3 HELIX 8 8 SER A 278 GLY A 290 1 13 HELIX 9 9 GLU A 304 LEU A 308 5 5 HELIX 10 10 THR A 323 VAL A 328 1 6 HELIX 11 11 GLY A 359 LYS A 365 1 7 SHEET 1 AA 6 ARG A 10 PHE A 12 0 SHEET 2 AA 6 GLN A 218 LEU A 221 -1 O ILE A 219 N ILE A 11 SHEET 3 AA 6 VAL A 200 TYR A 204 -1 O SER A 202 N VAL A 220 SHEET 4 AA 6 PHE A 366 ASP A 371 -1 O THR A 368 N PHE A 203 SHEET 5 AA 6 ARG A 376 ALA A 382 -1 O ARG A 376 N ASP A 371 SHEET 6 AA 6 TYR A 229 ASN A 237 -1 O GLU A 230 N LEU A 381 SHEET 1 AB 2 LYS A 14 ARG A 15 0 SHEET 2 AB 2 TYR A 63 ILE A 69 -1 O TYR A 64 N LYS A 14 SHEET 1 AC 2 LYS A 116 ARG A 125 0 SHEET 2 AC 2 THR A 130 THR A 141 -1 O VAL A 131 N LEU A 124 SHEET 1 AD 2 SER A 256 LEU A 259 0 SHEET 2 AD 2 GLN A 245 VAL A 253 -1 O VAL A 251 N LEU A 258 SHEET 1 AE 4 LYS A 318 LEU A 322 0 SHEET 2 AE 4 ILE A 311 LEU A 315 -1 O ILE A 311 N LEU A 322 SHEET 3 AE 4 GLN A 245 VAL A 253 -1 N LYS A 249 O HIS A 314 SHEET 4 AE 4 SER A 256 LEU A 259 -1 O SER A 256 N VAL A 253 SHEET 1 AF 5 LYS A 318 LEU A 322 0 SHEET 2 AF 5 ILE A 311 LEU A 315 -1 O ILE A 311 N LEU A 322 SHEET 3 AF 5 GLN A 245 VAL A 253 -1 N LYS A 249 O HIS A 314 SHEET 4 AF 5 CYS A 264 VAL A 268 -1 O CYS A 264 N MET A 248 SHEET 5 AF 5 TRP A 356 LEU A 358 1 O TRP A 356 N LEU A 267 SHEET 1 AG 2 ILE A 275 GLY A 277 0 SHEET 2 AG 2 ILE A 343 ALA A 345 1 O HIS A 344 N GLY A 277 SHEET 1 AH 2 VAL A 299 VAL A 300 0 SHEET 2 AH 2 CYS A 339 THR A 340 -1 O CYS A 339 N VAL A 300 SSBOND 1 CYS A 94 CYS A 101 1555 1555 2.05 SSBOND 2 CYS A 260 CYS A 264 1555 1555 2.03 SSBOND 3 CYS A 302 CYS A 339 1555 1555 2.03 LINK ND2 ASN A 118 C1 NAG B 1 1555 1555 1.45 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.42 LINK O6 NAG B 1 C1 FUC B 4 1555 1555 1.42 LINK O4 NAG B 2 C1 BMA B 3 1555 1555 1.45 CRYST1 141.320 141.320 75.850 90.00 90.00 90.00 I 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007076 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007076 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013184 0.00000