HEADER TRANSFERASE 29-MAR-12 4AOT
TITLE CRYSTAL STRUCTURE OF HUMAN SERINE THREONINE KINASE-10 (LOK) BOUND TO
TITLE 2 GW830263A
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE 10;
COMPND 3 CHAIN: A, B;
COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 18-317;
COMPND 5 SYNONYM: LYMPHOCYTE-ORIENTED KINASE;
COMPND 6 EC: 2.7.11.1;
COMPND 7 ENGINEERED: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: STK10, LOK;
SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);
SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008;
SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID;
SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PNIC28-BSA4
KEYWDS TRANSFERASE, STK10, LOK
EXPDTA X-RAY DIFFRACTION
AUTHOR J.M.ELKINS,E.SALAH,M.SZKLARZ,P.CANNING,F.VON DELFT,W.YUE,Y.LIU,
AUTHOR 2 C.BOUNTRA,C.ARROWSMITH,A.EDWARDS,S.KNAPP
REVDAT 6 20-DEC-23 4AOT 1 REMARK
REVDAT 5 13-JUN-18 4AOT 1 COMPND SOURCE DBREF
REVDAT 4 24-JAN-18 4AOT 1 AUTHOR JRNL
REVDAT 3 05-DEC-12 4AOT 1 AUTHOR JRNL
REVDAT 2 05-SEP-12 4AOT 1 REMARK
REVDAT 1 11-APR-12 4AOT 0
JRNL AUTH J.M.ELKINS,E.SALAH,M.SZKLARZ,P.CANNING,F.VON DELFT,W.YUE,
JRNL AUTH 2 Y.LIU,C.BOUNTRA,C.ARROWSMITH,A.EDWARDS,S.KNAPP
JRNL TITL CRYSTAL STRUCTURE OF HUMAN SERINE THREONINE KINASE-10 (LOK)
JRNL TITL 2 BOUND TO GW830263A
JRNL REF TO BE PUBLISHED
JRNL REFN
REMARK 2
REMARK 2 RESOLUTION. 2.33 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : REFMAC 5.6.0117
REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER,
REMARK 3 : NICHOLLS,WINN,LONG,VAGIN
REMARK 3
REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.33
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 75.40
REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7
REMARK 3 NUMBER OF REFLECTIONS : 30113
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.219
REMARK 3 R VALUE (WORKING SET) : 0.217
REMARK 3 FREE R VALUE : 0.252
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000
REMARK 3 FREE R VALUE TEST SET COUNT : 1600
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 20
REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.33
REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.39
REMARK 3 REFLECTION IN BIN (WORKING SET) : 1986
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.76
REMARK 3 BIN R VALUE (WORKING SET) : 0.2930
REMARK 3 BIN FREE R VALUE SET COUNT : 106
REMARK 3 BIN FREE R VALUE : 0.3730
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 4291
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 96
REMARK 3 SOLVENT ATOMS : 119
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : NULL
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 37.84
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -1.07000
REMARK 3 B22 (A**2) : 1.52000
REMARK 3 B33 (A**2) : -0.45000
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED OVERALL COORDINATE ERROR.
REMARK 3 ESU BASED ON R VALUE (A): 0.315
REMARK 3 ESU BASED ON FREE R VALUE (A): 0.232
REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.178
REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 14.080
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.932
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.908
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT
REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4491 ; 0.014 ; 0.020
REMARK 3 BOND LENGTHS OTHERS (A): 2971 ; 0.005 ; 0.020
REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6109 ; 1.593 ; 1.995
REMARK 3 BOND ANGLES OTHERS (DEGREES): 7277 ; 1.335 ; 3.009
REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 552 ; 5.937 ; 5.000
REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 179 ;35.916 ;24.358
REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 739 ;14.264 ;15.000
REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;22.639 ;15.000
REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 690 ; 0.084 ; 0.200
REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4930 ; 0.008 ; 0.021
REMARK 3 GENERAL PLANES OTHERS (A): 872 ; 0.004 ; 0.020
REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL
REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT
REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL
REMARK 3
REMARK 3 NCS RESTRAINTS STATISTICS
REMARK 3 NCS TYPE: LOCAL
REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1
REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT
REMARK 3 1 A 16 314 B 16 314 9023 0.11 0.05
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 4
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 1 A 112
REMARK 3 ORIGIN FOR THE GROUP (A): 5.2680 -20.8900 -6.9970
REMARK 3 T TENSOR
REMARK 3 T11: 0.0206 T22: 0.1773
REMARK 3 T33: 0.0757 T12: 0.0190
REMARK 3 T13: 0.0102 T23: 0.0090
REMARK 3 L TENSOR
REMARK 3 L11: 4.3367 L22: 1.1625
REMARK 3 L33: 1.1557 L12: 0.4687
REMARK 3 L13: 0.6801 L23: -0.0325
REMARK 3 S TENSOR
REMARK 3 S11: 0.0360 S12: 0.5066 S13: -0.2796
REMARK 3 S21: -0.1412 S22: -0.0405 S23: -0.1225
REMARK 3 S31: -0.0159 S32: 0.1184 S33: 0.0044
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : A 113 A 317
REMARK 3 ORIGIN FOR THE GROUP (A): -2.4750 4.0850 -9.1780
REMARK 3 T TENSOR
REMARK 3 T11: 0.1657 T22: 0.1535
REMARK 3 T33: 0.1983 T12: 0.0968
REMARK 3 T13: -0.0071 T23: 0.0993
REMARK 3 L TENSOR
REMARK 3 L11: 2.1247 L22: 2.6832
REMARK 3 L33: 2.2371 L12: 0.4863
REMARK 3 L13: -0.0014 L23: -0.3523
REMARK 3 S TENSOR
REMARK 3 S11: -0.0778 S12: 0.2284 S13: 0.4730
REMARK 3 S21: -0.0420 S22: 0.1408 S23: 0.4283
REMARK 3 S31: -0.5295 S32: -0.2667 S33: -0.0630
REMARK 3
REMARK 3 TLS GROUP : 3
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 1 B 112
REMARK 3 ORIGIN FOR THE GROUP (A): 27.0680 4.1460 16.3000
REMARK 3 T TENSOR
REMARK 3 T11: 0.4181 T22: 0.4205
REMARK 3 T33: 0.3920 T12: -0.1705
REMARK 3 T13: 0.0693 T23: -0.1257
REMARK 3 L TENSOR
REMARK 3 L11: 3.3957 L22: 1.7429
REMARK 3 L33: 2.7259 L12: 0.5752
REMARK 3 L13: 1.4711 L23: 0.4171
REMARK 3 S TENSOR
REMARK 3 S11: -0.0253 S12: -0.1689 S13: 0.6066
REMARK 3 S21: 0.1453 S22: 0.1605 S23: -0.2655
REMARK 3 S31: -0.6088 S32: 0.5176 S33: -0.1352
REMARK 3
REMARK 3 TLS GROUP : 4
REMARK 3 NUMBER OF COMPONENTS GROUP : 1
REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI
REMARK 3 RESIDUE RANGE : B 113 B 317
REMARK 3 ORIGIN FOR THE GROUP (A): 6.4090 -3.0210 27.7840
REMARK 3 T TENSOR
REMARK 3 T11: 0.2399 T22: 0.2419
REMARK 3 T33: 0.1538 T12: -0.0134
REMARK 3 T13: 0.0592 T23: -0.1175
REMARK 3 L TENSOR
REMARK 3 L11: 2.3194 L22: 1.3480
REMARK 3 L33: 3.6959 L12: 0.4319
REMARK 3 L13: -0.0174 L23: 0.4064
REMARK 3 S TENSOR
REMARK 3 S11: 0.0523 S12: -0.1471 S13: 0.2488
REMARK 3 S21: 0.1596 S22: -0.0731 S23: 0.1565
REMARK 3 S31: -0.2623 S32: -0.4335 S33: 0.0208
REMARK 3
REMARK 3 BULK SOLVENT MODELLING.
REMARK 3 METHOD USED : MASK
REMARK 3 PARAMETERS FOR MASK CALCULATION
REMARK 3 VDW PROBE RADIUS : 1.20
REMARK 3 ION PROBE RADIUS : 0.80
REMARK 3 SHRINKAGE RADIUS : 0.80
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING
REMARK 3 POSITIONS.
REMARK 4
REMARK 4 4AOT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 29-MAR-12.
REMARK 100 THE DEPOSITION ID IS D_1290051911.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 18-FEB-12
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 6.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : DIAMOND
REMARK 200 BEAMLINE : I04-1
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.9173
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : NULL
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : ADSC CCD
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM
REMARK 200 DATA SCALING SOFTWARE : AIMLESS
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31773
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.330
REMARK 200 RESOLUTION RANGE LOW (A) : 56.640
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8
REMARK 200 DATA REDUNDANCY : 6.100
REMARK 200 R MERGE (I) : 0.13500
REMARK 200 R SYM (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 9.8000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.33
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42
REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9
REMARK 200 DATA REDUNDANCY IN SHELL : 6.40
REMARK 200 R MERGE FOR SHELL (I) : 1.19000
REMARK 200 R SYM FOR SHELL (I) : NULL
REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.100
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: PDB ENTRY 2J7T
REMARK 200
REMARK 200 REMARK: NONE
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 53.40
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M NAI, 0.1M BISTRISPROPANE PH 6.5,
REMARK 280 20% PEG3350, 10% ETHYLENE GLYCOL
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X+1/2,-Y,Z+1/2
REMARK 290 3555 -X,Y+1/2,-Z+1/2
REMARK 290 4555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.84500
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 74.29500
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.75500
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 74.29500
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.84500
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.75500
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1, 2
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 350
REMARK 350 BIOMOLECULE: 2
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: B
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 LYS A 181
REMARK 465 ASN A 182
REMARK 465 LEU A 183
REMARK 465 LYS A 184
REMARK 465 THR A 185
REMARK 465 LEU A 186
REMARK 465 GLN A 187
REMARK 465 LYS A 188
REMARK 465 ARG A 189
REMARK 465 ASP A 190
REMARK 465 SER A 191
REMARK 465 PHE A 192
REMARK 465 ILE A 193
REMARK 465 CYS A 206
REMARK 465 GLU A 207
REMARK 465 THR A 208
REMARK 465 MET A 209
REMARK 465 LYS A 210
REMARK 465 ASP A 211
REMARK 465 THR A 212
REMARK 465 PRO A 213
REMARK 465 MET A 315
REMARK 465 GLU A 316
REMARK 465 GLU A 317
REMARK 465 ASP B 29
REMARK 465 LEU B 30
REMARK 465 ASN B 182
REMARK 465 LEU B 183
REMARK 465 LYS B 184
REMARK 465 THR B 185
REMARK 465 LEU B 186
REMARK 465 GLN B 187
REMARK 465 LYS B 188
REMARK 465 ARG B 189
REMARK 465 ASP B 190
REMARK 465 SER B 191
REMARK 465 PHE B 192
REMARK 465 CYS B 206
REMARK 465 GLU B 207
REMARK 465 THR B 208
REMARK 465 MET B 209
REMARK 465 LYS B 210
REMARK 465 ASP B 211
REMARK 465 THR B 212
REMARK 465 MET B 315
REMARK 465 GLU B 316
REMARK 465 GLU B 317
REMARK 470
REMARK 470 MISSING ATOM
REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;
REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;
REMARK 470 I=INSERTION CODE):
REMARK 470 M RES CSSEQI ATOMS
REMARK 470 SER A 16 OG
REMARK 470 ARG A 21 CD NE CZ NH1 NH2
REMARK 470 ASP A 29 CG OD1 OD2
REMARK 470 GLU A 68 CG CD OE1 OE2
REMARK 470 LYS A 70 CD CE NZ
REMARK 470 GLU A 72 CG CD OE1 OE2
REMARK 470 ASP A 103 CG OD1 OD2
REMARK 470 LYS A 105 NZ
REMARK 470 ARG A 156 CD NE CZ NH1 NH2
REMARK 470 LYS A 251 CD CE NZ
REMARK 470 LYS A 262 CD CE NZ
REMARK 470 LYS A 272 CE NZ
REMARK 470 LYS A 311 CG CD CE NZ
REMARK 470 SER B 20 OG
REMARK 470 ARG B 27 CG CD NE CZ NH1 NH2
REMARK 470 GLU B 34 CG CD OE1 OE2
REMARK 470 GLU B 37 CG CD OE1 OE2
REMARK 470 VAL B 39 CG1 CG2
REMARK 470 ASP B 44 CG OD1 OD2
REMARK 470 PHE B 47 CG CD1 CD2 CE1 CE2 CZ
REMARK 470 LYS B 49 CG CD CE NZ
REMARK 470 LYS B 54 CD CE NZ
REMARK 470 LYS B 56 CG CD CE NZ
REMARK 470 GLU B 57 CG CD OE1 OE2
REMARK 470 GLU B 68 CD OE1 OE2
REMARK 470 LYS B 70 CG CD CE NZ
REMARK 470 GLU B 73 CG CD OE1 OE2
REMARK 470 LYS B 95 CD CE NZ
REMARK 470 LYS B 105 CE NZ
REMARK 470 LYS B 151 CE NZ
REMARK 470 ARG B 152 CG CD NE CZ NH1 NH2
REMARK 470 ARG B 156 NE CZ NH1 NH2
REMARK 470 ILE B 193 CG1 CG2 CD1
REMARK 470 ASP B 215 CG OD1 OD2
REMARK 470 LYS B 248 NZ
REMARK 470 LYS B 251 CD CE NZ
REMARK 470 LYS B 262 CD CE NZ
REMARK 470 LYS B 272 CE NZ
REMARK 470 LYS B 311 CG CD CE NZ
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES
REMARK 500
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)
REMARK 500
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996
REMARK 500
REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3
REMARK 500 ARG B 18 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES
REMARK 500
REMARK 500 REMARK: NULL
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASP A 44 82.40 -152.69
REMARK 500 LYS A 70 -73.66 -76.97
REMARK 500 ASP A 157 21.30 -143.85
REMARK 500 ILE A 233 -48.80 75.86
REMARK 500 THR A 259 75.73 -116.91
REMARK 500 LYS B 70 -71.04 -80.17
REMARK 500 ARG B 152 30.23 76.93
REMARK 500 ASP B 157 22.21 -141.05
REMARK 500 ILE B 233 -46.66 73.22
REMARK 500 THR B 259 75.08 -117.39
REMARK 500
REMARK 500 REMARK: NULL
REMARK 525
REMARK 525 SOLVENT
REMARK 525
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE
REMARK 525 NUMBER; I=INSERTION CODE):
REMARK 525
REMARK 525 M RES CSSEQI
REMARK 525 HOH A2002 DISTANCE = 7.63 ANGSTROMS
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1315
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1316
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1317
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC4
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 1316
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC5
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 1318
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC6
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GW8 A 1319
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC7
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GW8 B 1319
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 2J7T RELATED DB: PDB
REMARK 900 CRYSTAL STRUCTURE OF HUMAN SERINE THREONINE KINASE-10 BOUND TO
REMARK 900 SU11274
REMARK 900 RELATED ID: 3ZZ2 RELATED DB: PDB
REMARK 900 CRYSTAL STRUCTURE OF HUMAN SERINE THREONINE KINASE-10 BOUND TO 4-
REMARK 900 [(2,4-DICHLORO-5-METHOXYPHENYL)AMINO]-6 - METHOXY-7-[3-(4-
REMARK 900 METHYLPIPERAZIN-1-YL)PROPOXY] QUINOLINE-3-CARBONITRILE APPARENTLY
REMARK 900 MODIFIED THROUGH RADIATION DAMAGE
DBREF 4AOT A 18 317 UNP O94804 STK10_HUMAN 18 317
DBREF 4AOT B 18 317 UNP O94804 STK10_HUMAN 18 317
SEQADV 4AOT SER A 16 UNP O94804 EXPRESSION TAG
SEQADV 4AOT MET A 17 UNP O94804 EXPRESSION TAG
SEQADV 4AOT SER B 16 UNP O94804 EXPRESSION TAG
SEQADV 4AOT MET B 17 UNP O94804 EXPRESSION TAG
SEQRES 1 A 302 SER MET ARG LYS SER ARG GLU TYR GLU HIS VAL ARG ARG
SEQRES 2 A 302 ASP LEU ASP PRO ASN GLU VAL TRP GLU ILE VAL GLY GLU
SEQRES 3 A 302 LEU GLY ASP GLY ALA PHE GLY LYS VAL TYR LYS ALA LYS
SEQRES 4 A 302 ASN LYS GLU THR GLY ALA LEU ALA ALA ALA LYS VAL ILE
SEQRES 5 A 302 GLU THR LYS SER GLU GLU GLU LEU GLU ASP TYR ILE VAL
SEQRES 6 A 302 GLU ILE GLU ILE LEU ALA THR CYS ASP HIS PRO TYR ILE
SEQRES 7 A 302 VAL LYS LEU LEU GLY ALA TYR TYR HIS ASP GLY LYS LEU
SEQRES 8 A 302 TRP ILE MET ILE GLU PHE CYS PRO GLY GLY ALA VAL ASP
SEQRES 9 A 302 ALA ILE MET LEU GLU LEU ASP ARG GLY LEU THR GLU PRO
SEQRES 10 A 302 GLN ILE GLN VAL VAL CYS ARG GLN MET LEU GLU ALA LEU
SEQRES 11 A 302 ASN PHE LEU HIS SER LYS ARG ILE ILE HIS ARG ASP LEU
SEQRES 12 A 302 LYS ALA GLY ASN VAL LEU MET THR LEU GLU GLY ASP ILE
SEQRES 13 A 302 ARG LEU ALA ASP PHE GLY VAL SER ALA LYS ASN LEU LYS
SEQRES 14 A 302 THR LEU GLN LYS ARG ASP SER PHE ILE GLY THR PRO TYR
SEQRES 15 A 302 TRP MET ALA PRO GLU VAL VAL MET CYS GLU THR MET LYS
SEQRES 16 A 302 ASP THR PRO TYR ASP TYR LYS ALA ASP ILE TRP SER LEU
SEQRES 17 A 302 GLY ILE THR LEU ILE GLU MET ALA GLN ILE GLU PRO PRO
SEQRES 18 A 302 HIS HIS GLU LEU ASN PRO MET ARG VAL LEU LEU LYS ILE
SEQRES 19 A 302 ALA LYS SER ASP PRO PRO THR LEU LEU THR PRO SER LYS
SEQRES 20 A 302 TRP SER VAL GLU PHE ARG ASP PHE LEU LYS ILE ALA LEU
SEQRES 21 A 302 ASP LYS ASN PRO GLU THR ARG PRO SER ALA ALA GLN LEU
SEQRES 22 A 302 LEU GLU HIS PRO PHE VAL SER SER ILE THR SER ASN LYS
SEQRES 23 A 302 ALA LEU ARG GLU LEU VAL ALA GLU ALA LYS ALA GLU VAL
SEQRES 24 A 302 MET GLU GLU
SEQRES 1 B 302 SER MET ARG LYS SER ARG GLU TYR GLU HIS VAL ARG ARG
SEQRES 2 B 302 ASP LEU ASP PRO ASN GLU VAL TRP GLU ILE VAL GLY GLU
SEQRES 3 B 302 LEU GLY ASP GLY ALA PHE GLY LYS VAL TYR LYS ALA LYS
SEQRES 4 B 302 ASN LYS GLU THR GLY ALA LEU ALA ALA ALA LYS VAL ILE
SEQRES 5 B 302 GLU THR LYS SER GLU GLU GLU LEU GLU ASP TYR ILE VAL
SEQRES 6 B 302 GLU ILE GLU ILE LEU ALA THR CYS ASP HIS PRO TYR ILE
SEQRES 7 B 302 VAL LYS LEU LEU GLY ALA TYR TYR HIS ASP GLY LYS LEU
SEQRES 8 B 302 TRP ILE MET ILE GLU PHE CYS PRO GLY GLY ALA VAL ASP
SEQRES 9 B 302 ALA ILE MET LEU GLU LEU ASP ARG GLY LEU THR GLU PRO
SEQRES 10 B 302 GLN ILE GLN VAL VAL CYS ARG GLN MET LEU GLU ALA LEU
SEQRES 11 B 302 ASN PHE LEU HIS SER LYS ARG ILE ILE HIS ARG ASP LEU
SEQRES 12 B 302 LYS ALA GLY ASN VAL LEU MET THR LEU GLU GLY ASP ILE
SEQRES 13 B 302 ARG LEU ALA ASP PHE GLY VAL SER ALA LYS ASN LEU LYS
SEQRES 14 B 302 THR LEU GLN LYS ARG ASP SER PHE ILE GLY THR PRO TYR
SEQRES 15 B 302 TRP MET ALA PRO GLU VAL VAL MET CYS GLU THR MET LYS
SEQRES 16 B 302 ASP THR PRO TYR ASP TYR LYS ALA ASP ILE TRP SER LEU
SEQRES 17 B 302 GLY ILE THR LEU ILE GLU MET ALA GLN ILE GLU PRO PRO
SEQRES 18 B 302 HIS HIS GLU LEU ASN PRO MET ARG VAL LEU LEU LYS ILE
SEQRES 19 B 302 ALA LYS SER ASP PRO PRO THR LEU LEU THR PRO SER LYS
SEQRES 20 B 302 TRP SER VAL GLU PHE ARG ASP PHE LEU LYS ILE ALA LEU
SEQRES 21 B 302 ASP LYS ASN PRO GLU THR ARG PRO SER ALA ALA GLN LEU
SEQRES 22 B 302 LEU GLU HIS PRO PHE VAL SER SER ILE THR SER ASN LYS
SEQRES 23 B 302 ALA LEU ARG GLU LEU VAL ALA GLU ALA LYS ALA GLU VAL
SEQRES 24 B 302 MET GLU GLU
HET CL A1315 1
HET CL A1316 1
HET CL A1317 1
HET CL A1318 1
HET GW8 A1319 45
HET CL B1315 1
HET CL B1316 1
HET GW8 B1319 45
HETNAM CL CHLORIDE ION
HETNAM GW8 1-(4-{METHYL[2-({4-[(METHYLSULFONYL)
HETNAM 2 GW8 METHYL]PHENYL}AMINO)PYRIMIDIN-4-YL]AMINO}PHENYL)-3-{3-
HETNAM 3 GW8 [(4-METHYLPIPERAZIN-1-YL)CARBONYL]PHENYL}UREA
HETSYN GW8 GW830263A
FORMUL 3 CL 6(CL 1-)
FORMUL 7 GW8 2(C32 H36 N8 O4 S)
FORMUL 11 HOH *119(H2 O)
HELIX 1 1 ASP A 31 GLU A 34 5 4
HELIX 2 2 SER A 71 THR A 87 1 17
HELIX 3 3 VAL A 118 ASP A 126 1 9
HELIX 4 4 THR A 130 LYS A 151 1 22
HELIX 5 5 LYS A 159 GLY A 161 5 3
HELIX 6 6 ALA A 200 MET A 205 1 6
HELIX 7 7 TYR A 216 ILE A 233 1 18
HELIX 8 8 ASN A 241 MET A 243 5 3
HELIX 9 9 ARG A 244 SER A 252 1 9
HELIX 10 10 THR A 259 TRP A 263 5 5
HELIX 11 11 SER A 264 LEU A 275 1 12
HELIX 12 12 SER A 284 LEU A 289 1 6
HELIX 13 13 ASN A 300 VAL A 314 1 15
HELIX 14 14 ASP B 31 GLU B 34 5 4
HELIX 15 15 SER B 71 THR B 87 1 17
HELIX 16 16 VAL B 118 ASP B 126 1 9
HELIX 17 17 THR B 130 LYS B 151 1 22
HELIX 18 18 LYS B 159 GLY B 161 5 3
HELIX 19 19 ALA B 200 MET B 205 1 6
HELIX 20 20 TYR B 216 ILE B 233 1 18
HELIX 21 21 ASN B 241 MET B 243 5 3
HELIX 22 22 ARG B 244 SER B 252 1 9
HELIX 23 23 THR B 259 TRP B 263 5 5
HELIX 24 24 SER B 264 LEU B 275 1 12
HELIX 25 25 SER B 284 LEU B 289 1 6
HELIX 26 26 ASN B 300 VAL B 314 1 15
SHEET 1 AA 6 VAL A 26 ARG A 28 0
SHEET 2 AA 6 LEU A 96 HIS A 102 1 O ALA A 99 N ARG A 27
SHEET 3 AA 6 LYS A 105 GLU A 111 -1 O LYS A 105 N HIS A 102
SHEET 4 AA 6 LEU A 61 GLU A 68 -1 O ALA A 63 N ILE A 110
SHEET 5 AA 6 LYS A 49 ASN A 55 -1 O LYS A 49 N VAL A 66
SHEET 6 AA 6 TRP A 36 ASP A 44 -1 O GLU A 37 N LYS A 54
SHEET 1 AB 3 GLY A 116 ALA A 117 0
SHEET 2 AB 3 VAL A 163 MET A 165 -1 N MET A 165 O GLY A 116
SHEET 3 AB 3 ILE A 171 LEU A 173 -1 O ARG A 172 N LEU A 164
SHEET 1 AC 2 ILE A 153 ILE A 154 0
SHEET 2 AC 2 MET B 17 ARG B 18 -1 O MET B 17 N ILE A 154
SHEET 1 BA 6 VAL B 26 ARG B 27 0
SHEET 2 BA 6 LEU B 96 HIS B 102 1 O ALA B 99 N ARG B 27
SHEET 3 BA 6 LYS B 105 GLU B 111 -1 O LYS B 105 N HIS B 102
SHEET 4 BA 6 LEU B 61 ILE B 67 -1 O ALA B 63 N ILE B 110
SHEET 5 BA 6 LYS B 49 ASN B 55 -1 O LYS B 49 N VAL B 66
SHEET 6 BA 6 TRP B 36 ASP B 44 -1 O GLU B 37 N LYS B 54
SHEET 1 BB 3 GLY B 116 ALA B 117 0
SHEET 2 BB 3 VAL B 163 MET B 165 -1 N MET B 165 O GLY B 116
SHEET 3 BB 3 ILE B 171 LEU B 173 -1 O ARG B 172 N LEU B 164
SITE 1 AC1 2 ARG A 244 LYS A 248
SITE 1 AC2 1 LYS A 217
SITE 1 AC3 1 HOH A2069
SITE 1 AC4 1 ARG B 244
SITE 1 AC5 1 TYR A 100
SITE 1 AC6 15 LEU A 42 ALA A 63 LYS A 65 TYR A 78
SITE 2 AC6 15 ILE A 108 ILE A 110 GLU A 111 PHE A 112
SITE 3 AC6 15 CYS A 113 ALA A 117 ALA A 120 LEU A 164
SITE 4 AC6 15 ASP A 175 PHE A 176 HOH A2026
SITE 1 AC7 13 LEU B 42 ALA B 63 LYS B 65 ILE B 67
SITE 2 AC7 13 TYR B 78 ILE B 108 ILE B 110 GLU B 111
SITE 3 AC7 13 PHE B 112 CYS B 113 LEU B 164 ASP B 175
SITE 4 AC7 13 PHE B 176
CRYST1 55.690 87.510 148.590 90.00 90.00 90.00 P 21 21 21 8
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.017957 0.000000 0.000000 0.00000
SCALE2 0.000000 0.011427 0.000000 0.00000
SCALE3 0.000000 0.000000 0.006730 0.00000
MTRIX1 1 0.658080 -0.730010 0.184450 -13.88238 1
MTRIX2 1 -0.726100 -0.550440 0.412070 -4.57636 1
MTRIX3 1 -0.199280 -0.405100 -0.892290 15.35894 1