HEADER HYDROLASE 20-APR-12 4AR1 TITLE CRYSTAL STRUCTURE OF THE PEPTIDASE DOMAIN OF COLLAGENASE H FROM TITLE 2 CLOSTRIDIUM HISTOLYTICUM AT 2.01 ANGSTROM RESOLUTION. COMPND MOL_ID: 1; COMPND 2 MOLECULE: COLH PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: PEPTIDASE DOMAIN, RESIDUES 331-721; COMPND 5 SYNONYM: COLLAGENASE; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM HISTOLYTICUM; SOURCE 3 ORGANISM_TAXID: 1498; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET-15B KEYWDS HYDROLASE, COLLAGEN, COLLAGENOLYSIS, PEPTIDASE M9, BACTERIAL KEYWDS 2 PEPTIDASE EXPDTA X-RAY DIFFRACTION AUTHOR U.ECKHARD,H.BRANDSTETTER REVDAT 3 20-DEC-23 4AR1 1 REMARK LINK REVDAT 2 31-JUL-13 4AR1 1 JRNL REVDAT 1 05-JUN-13 4AR1 0 JRNL AUTH U.ECKHARD,E.SCHONAUER,H.BRANDSTETTER JRNL TITL STRUCTURAL BASIS FOR ACTIVITY REGULATION AND SUBSTRATE JRNL TITL 2 PREFERENCE OF CLOSTRIDIAL COLLAGENASES G, H, AND T. JRNL REF J.BIOL.CHEM. V. 288 20184 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 23703618 JRNL DOI 10.1074/JBC.M112.448548 REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 28276 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.203 REMARK 3 R VALUE (WORKING SET) : 0.200 REMARK 3 FREE R VALUE : 0.250 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1511 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.01 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.07 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1891 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.06 REMARK 3 BIN R VALUE (WORKING SET) : 0.2940 REMARK 3 BIN FREE R VALUE SET COUNT : 102 REMARK 3 BIN FREE R VALUE : 0.3440 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3106 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 2 REMARK 3 SOLVENT ATOMS : 168 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 23.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.76 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.78000 REMARK 3 B22 (A**2) : 1.55000 REMARK 3 B33 (A**2) : -2.33000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.174 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.139 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.684 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.917 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3193 ; 0.006 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2155 ; 0.002 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4310 ; 0.988 ; 1.941 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5197 ; 0.829 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 380 ; 5.661 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 171 ;33.139 ;24.444 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 528 ;15.206 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;19.851 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 444 ; 0.059 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3605 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 698 ; 0.003 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 5348 ; 4.546 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 65 ;20.475 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 5369 ; 8.327 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 331 A 721 REMARK 3 ORIGIN FOR THE GROUP (A): -6.3618 -30.8765 13.8016 REMARK 3 T TENSOR REMARK 3 T11: 0.0098 T22: 0.0497 REMARK 3 T33: 0.0026 T12: -0.0033 REMARK 3 T13: -0.0012 T23: -0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.3617 L22: 0.1625 REMARK 3 L33: 0.5265 L12: -0.1588 REMARK 3 L13: 0.1243 L23: -0.1414 REMARK 3 S TENSOR REMARK 3 S11: -0.0255 S12: -0.0033 S13: 0.0234 REMARK 3 S21: 0.0172 S22: 0.0040 S23: -0.0055 REMARK 3 S31: -0.0143 S32: 0.0103 S33: 0.0215 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 4AR1 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-APR-12. REMARK 100 THE DEPOSITION ID IS D_1290052129. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 10-SEP-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.25 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29831 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.010 REMARK 200 RESOLUTION RANGE LOW (A) : 46.330 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.14000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.12 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.20 REMARK 200 R MERGE FOR SHELL (I) : 0.76000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2Y3U REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.31 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.47 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 22.5% PEG3350 AND 0.15M SODIUM REMARK 280 FORMATE, PH 7.25 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 39.52500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.11500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 39.52500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 54.11500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 328 REMARK 465 GLY A 329 REMARK 465 THR A 330 REMARK 465 LEU A 331 REMARK 465 ASP A 332 REMARK 465 LYS A 333 REMARK 465 PHE A 334 REMARK 465 LYS A 335 REMARK 465 LYS A 336 REMARK 465 GLU A 337 REMARK 465 GLY A 338 REMARK 465 LYS A 339 REMARK 465 GLU A 340 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 341 CG CD CE NZ REMARK 470 TYR A 342 CE1 CE2 CZ OH REMARK 470 LYS A 345 NZ REMARK 470 LYS A 412 CE NZ REMARK 470 LYS A 475 NZ REMARK 470 ARG A 576 NE CZ NH1 NH2 REMARK 470 GLU A 629 CD OE1 OE2 REMARK 470 LYS A 634 CD CE NZ REMARK 470 LYS A 637 CE NZ REMARK 470 LYS A 642 CE NZ REMARK 470 LYS A 661 NZ REMARK 470 LYS A 668 NZ REMARK 470 LYS A 680 NZ REMARK 470 LYS A 700 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 421 O HOH A 2053 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 GLU A 430 OE1 - CD - OE2 ANGL. DEV. = -9.8 DEGREES REMARK 500 GLU A 430 CG - CD - OE1 ANGL. DEV. = 14.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 420 -115.69 58.34 REMARK 500 ASP A 552 63.60 -154.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A1722 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 421 OD2 REMARK 620 2 HIS A 455 NE2 114.7 REMARK 620 3 HIS A 459 NE2 134.0 110.4 REMARK 620 4 GLU A 487 OE1 68.3 109.8 104.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1723 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 430 OE2 REMARK 620 2 GLU A 430 OE1 52.4 REMARK 620 3 GLY A 463 O 73.4 107.0 REMARK 620 4 VAL A 467 O 157.1 138.7 83.7 REMARK 620 5 GLY A 469 O 107.1 87.7 159.9 94.4 REMARK 620 6 HOH A2041 O 91.4 137.7 76.8 83.3 83.0 REMARK 620 7 HOH A2058 O 102.6 57.4 101.4 81.6 98.1 164.8 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 1722 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 1723 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THREE SEQUENCE CONFLICTS ARISE FROM A DIFFERENT STRAIN USED DBREF 4AR1 A 331 721 UNP Q46085 Q46085_CLOHI 331 721 SEQADV 4AR1 GLY A 328 UNP Q46085 EXPRESSION TAG SEQADV 4AR1 GLY A 329 UNP Q46085 EXPRESSION TAG SEQADV 4AR1 THR A 330 UNP Q46085 EXPRESSION TAG SEQADV 4AR1 HIS A 582 UNP Q46085 TYR 582 SEE REMARK 999 SEQADV 4AR1 VAL A 659 UNP Q46085 ALA 659 SEE REMARK 999 SEQADV 4AR1 LYS A 706 UNP Q46085 ARG 706 SEE REMARK 999 SEQRES 1 A 394 GLY GLY THR LEU ASP LYS PHE LYS LYS GLU GLY LYS GLU SEQRES 2 A 394 LYS TYR CYS PRO LYS THR TYR THR PHE ASP ASP GLY LYS SEQRES 3 A 394 VAL ILE ILE LYS ALA GLY ALA ARG VAL GLU GLU GLU LYS SEQRES 4 A 394 VAL LYS ARG LEU TYR TRP ALA SER LYS GLU VAL ASN SER SEQRES 5 A 394 GLN PHE PHE ARG VAL TYR GLY ILE ASP LYS PRO LEU GLU SEQRES 6 A 394 GLU GLY ASN PRO ASP ASP ILE LEU THR MET VAL ILE TYR SEQRES 7 A 394 ASN SER PRO GLU GLU TYR LYS LEU ASN SER VAL LEU TYR SEQRES 8 A 394 GLY TYR ASP THR ASN ASN GLY GLY MET TYR ILE GLU PRO SEQRES 9 A 394 GLU GLY THR PHE PHE THR TYR GLU ARG GLU ALA GLN GLU SEQRES 10 A 394 SER THR TYR THR LEU GLU GLU LEU PHE ARG HIS GLU TYR SEQRES 11 A 394 THR HIS TYR LEU GLN GLY ARG TYR ALA VAL PRO GLY GLN SEQRES 12 A 394 TRP GLY ARG THR LYS LEU TYR ASP ASN ASP ARG LEU THR SEQRES 13 A 394 TRP TYR GLU GLU GLY GLY ALA GLU LEU PHE ALA GLY SER SEQRES 14 A 394 THR ARG THR SER GLY ILE LEU PRO ARG LYS SER ILE VAL SEQRES 15 A 394 SER ASN ILE HIS ASN THR THR ARG ASN ASN ARG TYR LYS SEQRES 16 A 394 LEU SER ASP THR VAL HIS SER LYS TYR GLY ALA SER PHE SEQRES 17 A 394 GLU PHE TYR ASN TYR ALA CYS MET PHE MET ASP TYR MET SEQRES 18 A 394 TYR ASN LYS ASP MET GLY ILE LEU ASN LYS LEU ASN ASP SEQRES 19 A 394 LEU ALA LYS ASN ASN ASP VAL ASP GLY TYR ASP ASN TYR SEQRES 20 A 394 ILE ARG ASP LEU SER SER ASN HIS ALA LEU ASN ASP LYS SEQRES 21 A 394 TYR GLN ASP HIS MET GLN GLU ARG ILE ASP ASN TYR GLU SEQRES 22 A 394 ASN LEU THR VAL PRO PHE VAL ALA ASP ASP TYR LEU VAL SEQRES 23 A 394 ARG HIS ALA TYR LYS ASN PRO ASN GLU ILE TYR SER GLU SEQRES 24 A 394 ILE SER GLU VAL ALA LYS LEU LYS ASP ALA LYS SER GLU SEQRES 25 A 394 VAL LYS LYS SER GLN TYR PHE SER THR PHE THR LEU ARG SEQRES 26 A 394 GLY SER TYR THR GLY GLY VAL SER LYS GLY LYS LEU GLU SEQRES 27 A 394 ASP GLN LYS ALA MET ASN LYS PHE ILE ASP ASP SER LEU SEQRES 28 A 394 LYS LYS LEU ASP THR TYR SER TRP SER GLY TYR LYS THR SEQRES 29 A 394 LEU THR ALA TYR PHE THR ASN TYR LYS VAL ASP SER SER SEQRES 30 A 394 ASN LYS VAL THR TYR ASP VAL VAL PHE HIS GLY TYR LEU SEQRES 31 A 394 PRO ASN GLU GLY HET ZN A1722 1 HET CA A1723 1 HETNAM ZN ZINC ION HETNAM CA CALCIUM ION FORMUL 2 ZN ZN 2+ FORMUL 3 CA CA 2+ FORMUL 4 HOH *168(H2 O) HELIX 1 1 GLU A 363 GLY A 386 1 24 HELIX 2 2 ASN A 395 ILE A 399 5 5 HELIX 3 3 SER A 407 SER A 415 1 9 HELIX 4 4 GLY A 419 GLY A 425 5 7 HELIX 5 5 GLU A 430 GLU A 432 5 3 HELIX 6 6 GLU A 441 SER A 445 5 5 HELIX 7 7 THR A 448 ALA A 466 1 19 HELIX 8 8 THR A 474 ARG A 481 5 8 HELIX 9 9 LEU A 482 ALA A 494 1 13 HELIX 10 10 ARG A 505 ASN A 511 1 7 HELIX 11 11 THR A 516 ARG A 520 5 5 HELIX 12 12 LYS A 522 VAL A 527 1 6 HELIX 13 13 PHE A 535 ASP A 552 1 18 HELIX 14 14 ASP A 552 ASN A 565 1 14 HELIX 15 15 ASP A 567 SER A 580 1 14 HELIX 16 16 ASN A 581 ASN A 598 1 18 HELIX 17 17 TYR A 599 LEU A 602 5 4 HELIX 18 18 ALA A 608 VAL A 613 5 6 HELIX 19 19 ASN A 619 ALA A 631 1 13 HELIX 20 20 GLY A 662 THR A 683 1 22 HELIX 21 21 TRP A 686 LEU A 692 5 7 SHEET 1 AA 5 LYS A 345 PHE A 349 0 SHEET 2 AA 5 VAL A 354 ALA A 358 -1 O VAL A 354 N PHE A 349 SHEET 3 AA 5 LEU A 400 TYR A 405 1 O LEU A 400 N ILE A 355 SHEET 4 AA 5 THR A 434 TYR A 438 1 O PHE A 435 N VAL A 403 SHEET 5 AA 5 MET A 427 ILE A 429 -1 O MET A 427 N PHE A 436 SHEET 1 AB 4 LYS A 634 LYS A 642 0 SHEET 2 AB 4 SER A 647 VAL A 659 -1 O THR A 648 N LYS A 641 SHEET 3 AB 4 LYS A 706 LEU A 717 -1 O VAL A 707 N GLY A 657 SHEET 4 AB 4 THR A 693 VAL A 701 -1 O THR A 693 N HIS A 714 LINK OD2 ASP A 421 ZN ZN A1722 1555 1555 2.02 LINK OE2 GLU A 430 CA CA A1723 1555 1555 2.21 LINK OE1 GLU A 430 CA CA A1723 1555 1555 2.43 LINK NE2 HIS A 455 ZN ZN A1722 1555 1555 2.03 LINK NE2 HIS A 459 ZN ZN A1722 1555 1555 2.03 LINK O GLY A 463 CA CA A1723 1555 1555 2.36 LINK O VAL A 467 CA CA A1723 1555 1555 2.37 LINK O GLY A 469 CA CA A1723 1555 1555 2.35 LINK OE1 GLU A 487 ZN ZN A1722 1555 1555 1.99 LINK CA CA A1723 O HOH A2041 1555 1555 2.67 LINK CA CA A1723 O HOH A2058 1555 1555 2.18 SITE 1 AC1 4 ASP A 421 HIS A 455 HIS A 459 GLU A 487 SITE 1 AC2 6 GLU A 430 GLY A 463 VAL A 467 GLY A 469 SITE 2 AC2 6 HOH A2041 HOH A2058 CRYST1 79.050 108.230 51.270 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012650 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009240 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019505 0.00000