HEADER OXIDOREDUCTASE 01-MAY-12 4ASK TITLE CRYSTAL STRUCTURE OF JMJD3 WITH GSK-J1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: LYSINE-SPECIFIC DEMETHYLASE 6B; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CATALYTIC AND ZBD DOMAIN; COMPND 5 SYNONYM: JMJC DOMAIN-CONTAINING PROTEIN 3, JUMONJI DOMAIN-CONTAINING COMPND 6 PROTEIN 3, LYSINE DEMETHYLASE 6B JMJD3; COMPND 7 EC: 1.14.11.-; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_TAXID: 9606; SOURCE 4 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 5 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 7 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS KEYWDS OXIDOREDUCTASE, KDM6B, GSK-J1, INHIBITOR, LYSINE SPECIFIC HISTONE KEYWDS 2 DEMETHYLASE EXPDTA X-RAY DIFFRACTION AUTHOR C.CHUNG,J.MOSLEY,J.LIDDLE REVDAT 3 20-DEC-23 4ASK 1 REMARK LINK REVDAT 2 29-AUG-12 4ASK 1 JRNL REVDAT 1 25-JUL-12 4ASK 0 JRNL AUTH L.KRUIDENIER,C.CHUNG,Z.CHENG,J.LIDDLE,K.CHE,G.JOBERTY, JRNL AUTH 2 M.BANTSCHEFF,C.BOUNTRA,A.BRIDGES,H.DIALLO,D.EBERHARD, JRNL AUTH 3 S.HUTCHINSON,E.JONES,R.KATSO,M.LEVERIDGE,P.K.MANDER, JRNL AUTH 4 J.MOSLEY,C.RAMIREZ-MOLINA,P.ROWLAND,C.J.SCHOFIELD, JRNL AUTH 5 R.J.SHEPPARD,J.E.SMITH,C.SWALES,R.TANNER,P.THOMAS,A.TUMBER, JRNL AUTH 6 G.DREWES,U.OPPERMANN,D.J.PATEL,K.LEE,D.M.WILSON JRNL TITL A SELECTIVE JUMONJI H3K27 DEMETHYLASE INHIBITOR MODULATES JRNL TITL 2 THE PROINFLAMMATORY MACROPHAGE RESPONSE JRNL REF NATURE V. 488 404 2012 JRNL REFN ISSN 0028-0836 JRNL PMID 22842901 JRNL DOI 10.1038/NATURE11262 REMARK 2 REMARK 2 RESOLUTION. 1.86 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.86 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 71.37 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.2 REMARK 3 NUMBER OF REFLECTIONS : 80137 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.166 REMARK 3 R VALUE (WORKING SET) : 0.165 REMARK 3 FREE R VALUE : 0.209 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3319 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.86 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.91 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5684 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.75 REMARK 3 BIN R VALUE (WORKING SET) : 0.2370 REMARK 3 BIN FREE R VALUE SET COUNT : 225 REMARK 3 BIN FREE R VALUE : 0.2620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6800 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 62 REMARK 3 SOLVENT ATOMS : 1239 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.28 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.25000 REMARK 3 B22 (A**2) : 1.33000 REMARK 3 B33 (A**2) : -0.14000 REMARK 3 B12 (A**2) : -1.41000 REMARK 3 B13 (A**2) : -0.10000 REMARK 3 B23 (A**2) : 1.22000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.131 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.128 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.087 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.442 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.964 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.940 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7184 ; 0.006 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 4803 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9819 ; 1.083 ; 1.933 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11685 ; 0.797 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 887 ; 7.108 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 341 ;32.102 ;23.812 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1156 ;11.909 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 46 ;12.359 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1071 ; 0.062 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 8045 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 1535 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1141 A 1643 REMARK 3 ORIGIN FOR THE GROUP (A): 57.3802 17.1219 -13.8749 REMARK 3 T TENSOR REMARK 3 T11: 0.0497 T22: 0.0080 REMARK 3 T33: 0.0251 T12: -0.0064 REMARK 3 T13: -0.0046 T23: -0.0110 REMARK 3 L TENSOR REMARK 3 L11: 0.6161 L22: 0.1835 REMARK 3 L33: 0.5307 L12: -0.1774 REMARK 3 L13: 0.2870 L23: -0.1930 REMARK 3 S TENSOR REMARK 3 S11: -0.0030 S12: -0.0018 S13: 0.0195 REMARK 3 S21: 0.0032 S22: 0.0019 S23: 0.0025 REMARK 3 S31: -0.0202 S32: -0.0190 S33: 0.0011 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1141 B 1643 REMARK 3 ORIGIN FOR THE GROUP (A): 74.6706 46.2503 19.4864 REMARK 3 T TENSOR REMARK 3 T11: 0.0382 T22: 0.0179 REMARK 3 T33: 0.0378 T12: -0.0003 REMARK 3 T13: 0.0172 T23: -0.0129 REMARK 3 L TENSOR REMARK 3 L11: 0.5998 L22: 0.5133 REMARK 3 L33: 0.4765 L12: -0.1466 REMARK 3 L13: 0.2316 L23: -0.2052 REMARK 3 S TENSOR REMARK 3 S11: -0.0153 S12: 0.0428 S13: -0.0488 REMARK 3 S21: -0.0079 S22: 0.0278 S23: -0.0480 REMARK 3 S31: 0.0117 S32: -0.0477 S33: -0.0125 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 4ASK COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 01-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1290052333. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-SEP-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97625 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 83457 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.860 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.3 REMARK 200 DATA REDUNDANCY : 1.900 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.86 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.4 REMARK 200 DATA REDUNDANCY IN SHELL : 1.80 REMARK 200 R MERGE FOR SHELL (I) : 0.36000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 2XUE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M TRIS HCL, BICINE PH 8.5, 37.5% REMARK 280 MPD, PEG1K, PEG3350, 0.03M MGCL2, 0.03M CACL2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1140 REMARK 465 ASP A 1141 REMARK 465 VAL A 1142 REMARK 465 VAL A 1143 REMARK 465 ARG A 1144 REMARK 465 ALA A 1145 REMARK 465 SER A 1146 REMARK 465 ARG A 1147 REMARK 465 ASN A 1148 REMARK 465 ALA A 1149 REMARK 465 LYS A 1150 REMARK 465 VAL A 1151 REMARK 465 LYS A 1152 REMARK 465 GLY A 1153 REMARK 465 LYS A 1154 REMARK 465 PHE A 1155 REMARK 465 ARG A 1156 REMARK 465 GLU A 1157 REMARK 465 SER A 1158 REMARK 465 TYR A 1159 REMARK 465 LEU A 1160 REMARK 465 SER A 1161 REMARK 465 PRO A 1162 REMARK 465 ALA A 1163 REMARK 465 GLN A 1164 REMARK 465 SER A 1165 REMARK 465 VAL A 1166 REMARK 465 LYS A 1167 REMARK 465 PRO A 1168 REMARK 465 LYS A 1169 REMARK 465 ILE A 1170 REMARK 465 ASN A 1171 REMARK 465 THR A 1172 REMARK 465 GLU A 1173 REMARK 465 GLU A 1174 REMARK 465 LYS A 1175 REMARK 465 LEU A 1176 REMARK 465 GLN A 1293 REMARK 465 GLU A 1294 REMARK 465 GLU A 1295 REMARK 465 LYS A 1296 REMARK 465 GLU A 1297 REMARK 465 SER A 1298 REMARK 465 GLU A 1299 REMARK 465 ASP A 1300 REMARK 465 GLU A 1301 REMARK 465 GLU A 1302 REMARK 465 SER A 1303 REMARK 465 GLU A 1304 REMARK 465 GLU A 1305 REMARK 465 PRO A 1306 REMARK 465 ASP A 1307 REMARK 465 SER A 1308 REMARK 465 THR A 1309 REMARK 465 THR A 1310 REMARK 465 GLY A 1311 REMARK 465 THR A 1312 REMARK 465 PRO A 1313 REMARK 465 PRO A 1314 REMARK 465 SER A 1315 REMARK 465 SER A 1316 REMARK 465 ALA A 1317 REMARK 465 PRO A 1318 REMARK 465 ASP A 1319 REMARK 465 PRO A 1320 REMARK 465 LYS A 1321 REMARK 465 ASN A 1322 REMARK 465 ASN A 1592 REMARK 465 GLY A 1593 REMARK 465 SER A 1594 REMARK 465 ARG A 1595 REMARK 465 ALA A 1639 REMARK 465 SER A 1640 REMARK 465 THR A 1641 REMARK 465 SER A 1642 REMARK 465 ARG A 1643 REMARK 465 HIS A 1644 REMARK 465 HIS A 1645 REMARK 465 HIS A 1646 REMARK 465 HIS A 1647 REMARK 465 HIS A 1648 REMARK 465 HIS A 1649 REMARK 465 MET B 1140 REMARK 465 ASP B 1141 REMARK 465 VAL B 1142 REMARK 465 VAL B 1143 REMARK 465 ARG B 1144 REMARK 465 ALA B 1145 REMARK 465 SER B 1146 REMARK 465 ARG B 1147 REMARK 465 ASN B 1148 REMARK 465 ALA B 1149 REMARK 465 LYS B 1150 REMARK 465 VAL B 1151 REMARK 465 LYS B 1152 REMARK 465 GLY B 1153 REMARK 465 LYS B 1154 REMARK 465 PHE B 1155 REMARK 465 ARG B 1156 REMARK 465 GLU B 1157 REMARK 465 SER B 1158 REMARK 465 TYR B 1159 REMARK 465 LEU B 1160 REMARK 465 SER B 1161 REMARK 465 PRO B 1162 REMARK 465 ALA B 1163 REMARK 465 GLN B 1164 REMARK 465 SER B 1165 REMARK 465 VAL B 1166 REMARK 465 LYS B 1167 REMARK 465 PRO B 1168 REMARK 465 LYS B 1169 REMARK 465 ILE B 1170 REMARK 465 ASN B 1171 REMARK 465 THR B 1172 REMARK 465 GLU B 1173 REMARK 465 GLU B 1174 REMARK 465 LYS B 1175 REMARK 465 LEU B 1176 REMARK 465 PRO B 1177 REMARK 465 ARG B 1178 REMARK 465 GLU B 1179 REMARK 465 GLN B 1293 REMARK 465 GLU B 1294 REMARK 465 GLU B 1295 REMARK 465 LYS B 1296 REMARK 465 GLU B 1297 REMARK 465 SER B 1298 REMARK 465 GLU B 1299 REMARK 465 ASP B 1300 REMARK 465 GLU B 1301 REMARK 465 GLU B 1302 REMARK 465 SER B 1303 REMARK 465 GLU B 1304 REMARK 465 GLU B 1305 REMARK 465 PRO B 1306 REMARK 465 ASP B 1307 REMARK 465 SER B 1308 REMARK 465 THR B 1309 REMARK 465 THR B 1310 REMARK 465 GLY B 1311 REMARK 465 THR B 1312 REMARK 465 PRO B 1313 REMARK 465 PRO B 1314 REMARK 465 SER B 1315 REMARK 465 SER B 1316 REMARK 465 ALA B 1317 REMARK 465 PRO B 1318 REMARK 465 ASP B 1319 REMARK 465 PRO B 1320 REMARK 465 LYS B 1321 REMARK 465 ASN B 1322 REMARK 465 GLU B 1591 REMARK 465 ASN B 1592 REMARK 465 GLY B 1593 REMARK 465 SER B 1594 REMARK 465 ARG B 1595 REMARK 465 ASN B 1596 REMARK 465 ALA B 1639 REMARK 465 SER B 1640 REMARK 465 THR B 1641 REMARK 465 SER B 1642 REMARK 465 ARG B 1643 REMARK 465 HIS B 1644 REMARK 465 HIS B 1645 REMARK 465 HIS B 1646 REMARK 465 HIS B 1647 REMARK 465 HIS B 1648 REMARK 465 HIS B 1649 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A1178 CG CD NE CZ NH1 NH2 REMARK 470 LYS A1180 CG CD CE NZ REMARK 470 HIS A1323 CG ND1 CD2 CE1 NE2 REMARK 470 GLU A1591 CG CD OE1 OE2 REMARK 470 ASN A1596 CG OD1 ND2 REMARK 470 THR A1597 OG1 CG2 REMARK 470 LYS B1180 CG CD CE NZ REMARK 470 GLU B1290 CG CD OE1 OE2 REMARK 470 LEU B1292 CG CD1 CD2 REMARK 470 SER B1590 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A1238 72.80 -161.38 REMARK 500 MET A1373 -62.35 -105.52 REMARK 500 ASN A1584 -68.45 72.59 REMARK 500 SER B1238 60.54 -151.10 REMARK 500 SER B1238 57.88 -149.72 REMARK 500 MET B1373 -60.26 -106.77 REMARK 500 ASN B1584 -71.57 72.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 1404 PRO A 1405 68.51 REMARK 500 GLY B 1404 PRO B 1405 83.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLY A1404 11.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2049 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH A2119 DISTANCE = 6.63 ANGSTROMS REMARK 525 HOH A2125 DISTANCE = 6.28 ANGSTROMS REMARK 525 HOH A2131 DISTANCE = 6.70 ANGSTROMS REMARK 525 HOH A2177 DISTANCE = 6.40 ANGSTROMS REMARK 525 HOH A2214 DISTANCE = 6.16 ANGSTROMS REMARK 525 HOH A2224 DISTANCE = 6.25 ANGSTROMS REMARK 525 HOH A2233 DISTANCE = 6.04 ANGSTROMS REMARK 525 HOH A2573 DISTANCE = 6.87 ANGSTROMS REMARK 525 HOH B2022 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH B2042 DISTANCE = 5.81 ANGSTROMS REMARK 525 HOH B2052 DISTANCE = 6.49 ANGSTROMS REMARK 525 HOH B2057 DISTANCE = 5.95 ANGSTROMS REMARK 525 HOH B2201 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH B2202 DISTANCE = 7.12 ANGSTROMS REMARK 525 HOH B2485 DISTANCE = 6.91 ANGSTROMS REMARK 525 HOH B2487 DISTANCE = 6.44 ANGSTROMS REMARK 525 HOH B2489 DISTANCE = 6.07 ANGSTROMS REMARK 525 HOH B2493 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH B2537 DISTANCE = 7.67 ANGSTROMS REMARK 525 HOH B2538 DISTANCE = 8.70 ANGSTROMS REMARK 525 HOH B2539 DISTANCE = 9.25 ANGSTROMS REMARK 525 HOH B2540 DISTANCE = 6.59 ANGSTROMS REMARK 525 HOH B2541 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH B2542 DISTANCE = 8.89 ANGSTROMS REMARK 525 HOH B2543 DISTANCE = 6.99 ANGSTROMS REMARK 525 HOH B2544 DISTANCE = 8.45 ANGSTROMS REMARK 525 HOH B2546 DISTANCE = 9.82 ANGSTROMS REMARK 525 HOH B2547 DISTANCE = 6.05 ANGSTROMS REMARK 525 HOH B2548 DISTANCE = 7.70 ANGSTROMS REMARK 525 HOH B2549 DISTANCE = 8.03 ANGSTROMS REMARK 525 HOH B2551 DISTANCE = 8.92 ANGSTROMS REMARK 525 HOH B2553 DISTANCE = 8.80 ANGSTROMS REMARK 525 HOH B2554 DISTANCE = 7.37 ANGSTROMS REMARK 525 HOH B2555 DISTANCE = 7.93 ANGSTROMS REMARK 525 HOH B2557 DISTANCE = 5.96 ANGSTROMS REMARK 525 HOH B2558 DISTANCE = 7.06 ANGSTROMS REMARK 525 HOH B2560 DISTANCE = 6.01 ANGSTROMS REMARK 525 HOH B2561 DISTANCE = 5.93 ANGSTROMS REMARK 525 HOH B2563 DISTANCE = 7.71 ANGSTROMS REMARK 525 HOH B2564 DISTANCE = 8.48 ANGSTROMS REMARK 525 HOH B2565 DISTANCE = 7.33 ANGSTROMS REMARK 525 HOH B2566 DISTANCE = 7.26 ANGSTROMS REMARK 525 HOH B2567 DISTANCE = 9.73 ANGSTROMS REMARK 525 HOH B2568 DISTANCE = 9.55 ANGSTROMS REMARK 525 HOH B2569 DISTANCE = 6.46 ANGSTROMS REMARK 525 HOH B2571 DISTANCE = 6.66 ANGSTROMS REMARK 525 HOH B2572 DISTANCE = 8.62 ANGSTROMS REMARK 525 HOH B2573 DISTANCE = 9.83 ANGSTROMS REMARK 525 HOH B2574 DISTANCE = 6.61 ANGSTROMS REMARK 525 HOH B2575 DISTANCE = 7.56 ANGSTROMS REMARK 525 HOH B2576 DISTANCE = 8.26 ANGSTROMS REMARK 525 HOH B2577 DISTANCE = 7.14 ANGSTROMS REMARK 525 HOH B2579 DISTANCE = 8.88 ANGSTROMS REMARK 525 HOH B2580 DISTANCE = 6.89 ANGSTROMS REMARK 525 HOH B2581 DISTANCE = 6.26 ANGSTROMS REMARK 525 HOH B2582 DISTANCE = 8.34 ANGSTROMS REMARK 525 HOH B2584 DISTANCE = 8.12 ANGSTROMS REMARK 525 HOH B2585 DISTANCE = 8.59 ANGSTROMS REMARK 525 HOH B2587 DISTANCE = 7.21 ANGSTROMS REMARK 525 HOH B2588 DISTANCE = 9.31 ANGSTROMS REMARK 525 HOH B2589 DISTANCE = 6.01 ANGSTROMS REMARK 525 HOH B2590 DISTANCE = 9.15 ANGSTROMS REMARK 525 HOH B2591 DISTANCE = 7.88 ANGSTROMS REMARK 525 HOH B2592 DISTANCE = 7.46 ANGSTROMS REMARK 525 HOH B2593 DISTANCE = 9.50 ANGSTROMS REMARK 525 HOH B2594 DISTANCE = 9.14 ANGSTROMS REMARK 525 HOH B2596 DISTANCE = 6.74 ANGSTROMS REMARK 525 HOH B2597 DISTANCE = 9.36 ANGSTROMS REMARK 525 HOH B2598 DISTANCE = 8.41 ANGSTROMS REMARK 525 HOH B2599 DISTANCE = 9.15 ANGSTROMS REMARK 525 HOH B2600 DISTANCE = 9.38 ANGSTROMS REMARK 525 HOH B2603 DISTANCE = 7.48 ANGSTROMS REMARK 525 HOH B2604 DISTANCE = 9.28 ANGSTROMS REMARK 525 HOH B2606 DISTANCE = 6.78 ANGSTROMS REMARK 525 HOH B2607 DISTANCE = 6.64 ANGSTROMS REMARK 525 HOH B2609 DISTANCE = 6.01 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A3000 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A1390 NE2 REMARK 620 2 GLU A1392 OE2 87.8 REMARK 620 3 HOH A2327 O 89.9 87.6 REMARK 620 4 HOH A2335 O 176.2 88.4 89.5 REMARK 620 5 K0I A2639 N4 92.5 98.1 173.8 88.4 REMARK 620 6 K0I A2639 C12 92.5 77.9 165.2 87.1 20.2 REMARK 620 7 K0I A2639 C8 87.9 121.6 150.5 94.4 24.2 44.2 REMARK 620 8 K0I A2639 C7 87.7 150.3 121.7 95.8 52.8 73.0 28.8 REMARK 620 9 K0I A2639 N3 92.8 174.8 97.5 91.0 76.7 96.9 53.3 24.7 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A2000 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A1575 SG REMARK 620 2 CYS A1578 SG 109.2 REMARK 620 3 CYS A1602 SG 113.8 111.3 REMARK 620 4 CYS A1605 SG 105.9 116.5 100.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO B3000 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B1390 NE2 REMARK 620 2 GLU B1392 OE2 87.2 REMARK 620 3 HOH B2262 O 89.5 87.9 REMARK 620 4 HOH B2270 O 172.8 85.7 90.4 REMARK 620 5 K0I B2639 C12 91.3 76.1 163.9 86.8 REMARK 620 6 K0I B2639 N4 93.2 96.8 174.7 87.5 20.7 REMARK 620 7 K0I B2639 C8 89.8 120.6 151.4 93.7 44.6 24.2 REMARK 620 8 K0I B2639 C7 90.6 149.4 122.6 95.5 73.4 52.8 28.9 REMARK 620 9 K0I B2639 N3 96.5 172.8 98.4 90.7 97.5 76.7 53.4 24.9 REMARK 620 N 1 2 3 4 5 6 7 8 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B2000 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B1575 SG REMARK 620 2 CYS B1578 SG 108.2 REMARK 620 3 CYS B1602 SG 113.4 113.1 REMARK 620 4 CYS B1605 SG 106.2 117.3 98.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 2000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 3000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 2000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO B 3000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K0I A 2639 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K0I B 2639 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2XUE RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF JMJD3 REMARK 900 RELATED ID: 2XXZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE HUMAN JMJD3 JUMONJI DOMAIN DBREF 4ASK A 1141 1643 UNP O15054 KDM6B_HUMAN 1141 1643 DBREF 4ASK B 1141 1643 UNP O15054 KDM6B_HUMAN 1141 1643 SEQADV 4ASK MET A 1140 UNP O15054 EXPRESSION TAG SEQADV 4ASK HIS A 1644 UNP O15054 EXPRESSION TAG SEQADV 4ASK HIS A 1645 UNP O15054 EXPRESSION TAG SEQADV 4ASK HIS A 1646 UNP O15054 EXPRESSION TAG SEQADV 4ASK HIS A 1647 UNP O15054 EXPRESSION TAG SEQADV 4ASK HIS A 1648 UNP O15054 EXPRESSION TAG SEQADV 4ASK HIS A 1649 UNP O15054 EXPRESSION TAG SEQADV 4ASK MET B 1140 UNP O15054 EXPRESSION TAG SEQADV 4ASK HIS B 1644 UNP O15054 EXPRESSION TAG SEQADV 4ASK HIS B 1645 UNP O15054 EXPRESSION TAG SEQADV 4ASK HIS B 1646 UNP O15054 EXPRESSION TAG SEQADV 4ASK HIS B 1647 UNP O15054 EXPRESSION TAG SEQADV 4ASK HIS B 1648 UNP O15054 EXPRESSION TAG SEQADV 4ASK HIS B 1649 UNP O15054 EXPRESSION TAG SEQRES 1 A 510 MET ASP VAL VAL ARG ALA SER ARG ASN ALA LYS VAL LYS SEQRES 2 A 510 GLY LYS PHE ARG GLU SER TYR LEU SER PRO ALA GLN SER SEQRES 3 A 510 VAL LYS PRO LYS ILE ASN THR GLU GLU LYS LEU PRO ARG SEQRES 4 A 510 GLU LYS LEU ASN PRO PRO THR PRO SER ILE TYR LEU GLU SEQRES 5 A 510 SER LYS ARG ASP ALA PHE SER PRO VAL LEU LEU GLN PHE SEQRES 6 A 510 CYS THR ASP PRO ARG ASN PRO ILE THR VAL ILE ARG GLY SEQRES 7 A 510 LEU ALA GLY SER LEU ARG LEU ASN LEU GLY LEU PHE SER SEQRES 8 A 510 THR LYS THR LEU VAL GLU ALA SER GLY GLU HIS THR VAL SEQRES 9 A 510 GLU VAL ARG THR GLN VAL GLN GLN PRO SER ASP GLU ASN SEQRES 10 A 510 TRP ASP LEU THR GLY THR ARG GLN ILE TRP PRO CYS GLU SEQRES 11 A 510 SER SER ARG SER HIS THR THR ILE ALA LYS TYR ALA GLN SEQRES 12 A 510 TYR GLN ALA SER SER PHE GLN GLU SER LEU GLN GLU GLU SEQRES 13 A 510 LYS GLU SER GLU ASP GLU GLU SER GLU GLU PRO ASP SER SEQRES 14 A 510 THR THR GLY THR PRO PRO SER SER ALA PRO ASP PRO LYS SEQRES 15 A 510 ASN HIS HIS ILE ILE LYS PHE GLY THR ASN ILE ASP LEU SEQRES 16 A 510 SER ASP ALA LYS ARG TRP LYS PRO GLN LEU GLN GLU LEU SEQRES 17 A 510 LEU LYS LEU PRO ALA PHE MET ARG VAL THR SER THR GLY SEQRES 18 A 510 ASN MET LEU SER HIS VAL GLY HIS THR ILE LEU GLY MET SEQRES 19 A 510 ASN THR VAL GLN LEU TYR MET LYS VAL PRO GLY SER ARG SEQRES 20 A 510 THR PRO GLY HIS GLN GLU ASN ASN ASN PHE CYS SER VAL SEQRES 21 A 510 ASN ILE ASN ILE GLY PRO GLY ASP CYS GLU TRP PHE ALA SEQRES 22 A 510 VAL HIS GLU HIS TYR TRP GLU THR ILE SER ALA PHE CYS SEQRES 23 A 510 ASP ARG HIS GLY VAL ASP TYR LEU THR GLY SER TRP TRP SEQRES 24 A 510 PRO ILE LEU ASP ASP LEU TYR ALA SER ASN ILE PRO VAL SEQRES 25 A 510 TYR ARG PHE VAL GLN ARG PRO GLY ASP LEU VAL TRP ILE SEQRES 26 A 510 ASN ALA GLY THR VAL HIS TRP VAL GLN ALA THR GLY TRP SEQRES 27 A 510 CYS ASN ASN ILE ALA TRP ASN VAL GLY PRO LEU THR ALA SEQRES 28 A 510 TYR GLN TYR GLN LEU ALA LEU GLU ARG TYR GLU TRP ASN SEQRES 29 A 510 GLU VAL LYS ASN VAL LYS SER ILE VAL PRO MET ILE HIS SEQRES 30 A 510 VAL SER TRP ASN VAL ALA ARG THR VAL LYS ILE SER ASP SEQRES 31 A 510 PRO ASP LEU PHE LYS MET ILE LYS PHE CYS LEU LEU GLN SEQRES 32 A 510 SER MET LYS HIS CYS GLN VAL GLN ARG GLU SER LEU VAL SEQRES 33 A 510 ARG ALA GLY LYS LYS ILE ALA TYR GLN GLY ARG VAL LYS SEQRES 34 A 510 ASP GLU PRO ALA TYR TYR CYS ASN GLU CYS ASP VAL GLU SEQRES 35 A 510 VAL PHE ASN ILE LEU PHE VAL THR SER GLU ASN GLY SER SEQRES 36 A 510 ARG ASN THR TYR LEU VAL HIS CYS GLU GLY CYS ALA ARG SEQRES 37 A 510 ARG ARG SER ALA GLY LEU GLN GLY VAL VAL VAL LEU GLU SEQRES 38 A 510 GLN TYR ARG THR GLU GLU LEU ALA GLN ALA TYR ASP ALA SEQRES 39 A 510 PHE THR LEU ALA PRO ALA SER THR SER ARG HIS HIS HIS SEQRES 40 A 510 HIS HIS HIS SEQRES 1 B 510 MET ASP VAL VAL ARG ALA SER ARG ASN ALA LYS VAL LYS SEQRES 2 B 510 GLY LYS PHE ARG GLU SER TYR LEU SER PRO ALA GLN SER SEQRES 3 B 510 VAL LYS PRO LYS ILE ASN THR GLU GLU LYS LEU PRO ARG SEQRES 4 B 510 GLU LYS LEU ASN PRO PRO THR PRO SER ILE TYR LEU GLU SEQRES 5 B 510 SER LYS ARG ASP ALA PHE SER PRO VAL LEU LEU GLN PHE SEQRES 6 B 510 CYS THR ASP PRO ARG ASN PRO ILE THR VAL ILE ARG GLY SEQRES 7 B 510 LEU ALA GLY SER LEU ARG LEU ASN LEU GLY LEU PHE SER SEQRES 8 B 510 THR LYS THR LEU VAL GLU ALA SER GLY GLU HIS THR VAL SEQRES 9 B 510 GLU VAL ARG THR GLN VAL GLN GLN PRO SER ASP GLU ASN SEQRES 10 B 510 TRP ASP LEU THR GLY THR ARG GLN ILE TRP PRO CYS GLU SEQRES 11 B 510 SER SER ARG SER HIS THR THR ILE ALA LYS TYR ALA GLN SEQRES 12 B 510 TYR GLN ALA SER SER PHE GLN GLU SER LEU GLN GLU GLU SEQRES 13 B 510 LYS GLU SER GLU ASP GLU GLU SER GLU GLU PRO ASP SER SEQRES 14 B 510 THR THR GLY THR PRO PRO SER SER ALA PRO ASP PRO LYS SEQRES 15 B 510 ASN HIS HIS ILE ILE LYS PHE GLY THR ASN ILE ASP LEU SEQRES 16 B 510 SER ASP ALA LYS ARG TRP LYS PRO GLN LEU GLN GLU LEU SEQRES 17 B 510 LEU LYS LEU PRO ALA PHE MET ARG VAL THR SER THR GLY SEQRES 18 B 510 ASN MET LEU SER HIS VAL GLY HIS THR ILE LEU GLY MET SEQRES 19 B 510 ASN THR VAL GLN LEU TYR MET LYS VAL PRO GLY SER ARG SEQRES 20 B 510 THR PRO GLY HIS GLN GLU ASN ASN ASN PHE CYS SER VAL SEQRES 21 B 510 ASN ILE ASN ILE GLY PRO GLY ASP CYS GLU TRP PHE ALA SEQRES 22 B 510 VAL HIS GLU HIS TYR TRP GLU THR ILE SER ALA PHE CYS SEQRES 23 B 510 ASP ARG HIS GLY VAL ASP TYR LEU THR GLY SER TRP TRP SEQRES 24 B 510 PRO ILE LEU ASP ASP LEU TYR ALA SER ASN ILE PRO VAL SEQRES 25 B 510 TYR ARG PHE VAL GLN ARG PRO GLY ASP LEU VAL TRP ILE SEQRES 26 B 510 ASN ALA GLY THR VAL HIS TRP VAL GLN ALA THR GLY TRP SEQRES 27 B 510 CYS ASN ASN ILE ALA TRP ASN VAL GLY PRO LEU THR ALA SEQRES 28 B 510 TYR GLN TYR GLN LEU ALA LEU GLU ARG TYR GLU TRP ASN SEQRES 29 B 510 GLU VAL LYS ASN VAL LYS SER ILE VAL PRO MET ILE HIS SEQRES 30 B 510 VAL SER TRP ASN VAL ALA ARG THR VAL LYS ILE SER ASP SEQRES 31 B 510 PRO ASP LEU PHE LYS MET ILE LYS PHE CYS LEU LEU GLN SEQRES 32 B 510 SER MET LYS HIS CYS GLN VAL GLN ARG GLU SER LEU VAL SEQRES 33 B 510 ARG ALA GLY LYS LYS ILE ALA TYR GLN GLY ARG VAL LYS SEQRES 34 B 510 ASP GLU PRO ALA TYR TYR CYS ASN GLU CYS ASP VAL GLU SEQRES 35 B 510 VAL PHE ASN ILE LEU PHE VAL THR SER GLU ASN GLY SER SEQRES 36 B 510 ARG ASN THR TYR LEU VAL HIS CYS GLU GLY CYS ALA ARG SEQRES 37 B 510 ARG ARG SER ALA GLY LEU GLN GLY VAL VAL VAL LEU GLU SEQRES 38 B 510 GLN TYR ARG THR GLU GLU LEU ALA GLN ALA TYR ASP ALA SEQRES 39 B 510 PHE THR LEU ALA PRO ALA SER THR SER ARG HIS HIS HIS SEQRES 40 B 510 HIS HIS HIS HET ZN A2000 1 HET K0I A2639 29 HET CO A3000 1 HET ZN B2000 1 HET K0I B2639 29 HET CO B3000 1 HETNAM ZN ZINC ION HETNAM K0I 3-[[2-PYRIDIN-2-YL-6-(1,2,4,5-TETRAHYDRO-3-BENZAZEPIN- HETNAM 2 K0I 3-YL)PYRIMIDIN-4-YL]AMINO]PROPANOIC ACID HETNAM CO COBALT (II) ION HETSYN K0I 3-((6-(4,5-DIHYDRO-1H-BENZO[D]AZEPIN-3(2H)-YL)-2- HETSYN 2 K0I (PYRIDIN-2-YL)PYRIMIDIN-4-YL)AMINO)PROPANOIC ACID FORMUL 3 ZN 2(ZN 2+) FORMUL 4 K0I 2(C22 H23 N5 O2) FORMUL 5 CO 2(CO 2+) FORMUL 9 HOH *1239(H2 O) HELIX 1 1 PRO A 1177 ASN A 1182 1 6 HELIX 2 2 SER A 1192 PHE A 1197 1 6 HELIX 3 3 SER A 1198 ASP A 1207 1 10 HELIX 4 4 GLY A 1217 LEU A 1222 1 6 HELIX 5 5 ASN A 1225 PHE A 1229 5 5 HELIX 6 6 SER A 1230 GLY A 1239 1 10 HELIX 7 7 ILE A 1277 LEU A 1292 1 16 HELIX 8 8 TRP A 1340 LEU A 1347 1 8 HELIX 9 9 LEU A 1348 LEU A 1350 5 3 HELIX 10 10 PRO A 1351 ARG A 1355 5 5 HELIX 11 11 MET A 1362 VAL A 1366 5 5 HELIX 12 12 GLU A 1392 PHE A 1396 5 5 HELIX 13 13 HIS A 1414 HIS A 1416 5 3 HELIX 14 14 TYR A 1417 HIS A 1428 1 12 HELIX 15 15 ILE A 1440 SER A 1447 1 8 HELIX 16 16 THR A 1489 LYS A 1506 1 18 HELIX 17 17 PRO A 1513 VAL A 1525 1 13 HELIX 18 18 ASP A 1529 GLY A 1558 1 30 HELIX 19 19 CYS A 1602 ARG A 1609 1 8 HELIX 20 20 ARG A 1623 PHE A 1634 1 12 HELIX 21 21 SER B 1192 PHE B 1197 1 6 HELIX 22 22 SER B 1198 ASP B 1207 1 10 HELIX 23 23 GLY B 1217 LEU B 1222 1 6 HELIX 24 24 ASN B 1225 PHE B 1229 5 5 HELIX 25 25 SER B 1230 GLY B 1239 1 10 HELIX 26 26 ILE B 1277 SER B 1291 1 15 HELIX 27 27 TRP B 1340 LEU B 1347 1 8 HELIX 28 28 LEU B 1348 LEU B 1350 5 3 HELIX 29 29 PRO B 1351 ARG B 1355 5 5 HELIX 30 30 MET B 1362 VAL B 1366 5 5 HELIX 31 31 GLU B 1392 PHE B 1396 5 5 HELIX 32 32 HIS B 1414 HIS B 1416 5 3 HELIX 33 33 TYR B 1417 HIS B 1428 1 12 HELIX 34 34 ILE B 1440 SER B 1447 1 8 HELIX 35 35 THR B 1489 LYS B 1506 1 18 HELIX 36 36 PRO B 1513 VAL B 1525 1 13 HELIX 37 37 ASP B 1529 GLY B 1558 1 30 HELIX 38 38 CYS B 1602 ARG B 1609 1 8 HELIX 39 39 ARG B 1623 PHE B 1634 1 12 SHEET 1 AA 9 SER A1187 TYR A1189 0 SHEET 2 AA 9 ILE A1212 ARG A1216 1 O VAL A1214 N ILE A1188 SHEET 3 AA 9 LEU A1461 ILE A1464 -1 O LEU A1461 N ILE A1215 SHEET 4 AA 9 CYS A1397 PRO A1405 -1 O SER A1398 N ILE A1464 SHEET 5 AA 9 CYS A1478 VAL A1485 -1 O ASN A1479 N ILE A1403 SHEET 6 AA 9 GLN A1377 LYS A1381 -1 O GLN A1377 N ALA A1482 SHEET 7 AA 9 ILE A1325 ASP A1333 -1 O GLY A1329 N MET A1380 SHEET 8 AA 9 THR A1242 VAL A1249 -1 O GLU A1244 N THR A1330 SHEET 9 AA 9 SER A1271 THR A1276 -1 O SER A1271 N THR A1247 SHEET 1 AB 4 ARG A1386 HIS A1390 0 SHEET 2 AB 4 VAL A1469 ALA A1474 -1 O HIS A1470 N HIS A1390 SHEET 3 AB 4 CYS A1408 VAL A1413 -1 O GLU A1409 N GLN A1473 SHEET 4 AB 4 TYR A1452 GLN A1456 -1 O TYR A1452 N ALA A1412 SHEET 1 AC 4 ILE A1561 TYR A1563 0 SHEET 2 AC 4 VAL A1617 GLU A1620 1 O VAL A1618 N ALA A1562 SHEET 3 AC 4 ILE A1585 SER A1590 -1 O LEU A1586 N LEU A1619 SHEET 4 AC 4 TYR A1598 HIS A1601 -1 O LEU A1599 N THR A1589 SHEET 1 AD 2 TYR A1573 TYR A1574 0 SHEET 2 AD 2 GLU A1581 VAL A1582 -1 O VAL A1582 N TYR A1573 SHEET 1 BA 9 SER B1187 TYR B1189 0 SHEET 2 BA 9 ILE B1212 ARG B1216 1 O VAL B1214 N ILE B1188 SHEET 3 BA 9 LEU B1461 ILE B1464 -1 O LEU B1461 N ILE B1215 SHEET 4 BA 9 CYS B1397 ASN B1402 -1 O SER B1398 N ILE B1464 SHEET 5 BA 9 CYS B1478 VAL B1485 -1 O ILE B1481 N ILE B1401 SHEET 6 BA 9 GLN B1377 LYS B1381 -1 O GLN B1377 N ALA B1482 SHEET 7 BA 9 ILE B1325 ASP B1333 -1 O GLY B1329 N MET B1380 SHEET 8 BA 9 THR B1242 VAL B1249 -1 O GLU B1244 N THR B1330 SHEET 9 BA 9 SER B1271 THR B1276 -1 O SER B1271 N THR B1247 SHEET 1 BB 4 ARG B1386 HIS B1390 0 SHEET 2 BB 4 VAL B1469 ALA B1474 -1 O HIS B1470 N HIS B1390 SHEET 3 BB 4 CYS B1408 VAL B1413 -1 O GLU B1409 N GLN B1473 SHEET 4 BB 4 TYR B1452 GLN B1456 -1 O TYR B1452 N ALA B1412 SHEET 1 BC 4 ILE B1561 TYR B1563 0 SHEET 2 BC 4 VAL B1617 GLU B1620 1 O VAL B1618 N ALA B1562 SHEET 3 BC 4 ILE B1585 THR B1589 -1 O LEU B1586 N LEU B1619 SHEET 4 BC 4 LEU B1599 HIS B1601 -1 O LEU B1599 N THR B1589 SHEET 1 BD 2 TYR B1573 TYR B1574 0 SHEET 2 BD 2 GLU B1581 VAL B1582 -1 O VAL B1582 N TYR B1573 LINK NE2 HIS A1390 CO CO A3000 1555 1555 2.21 LINK OE2 GLU A1392 CO CO A3000 1555 1555 2.17 LINK SG CYS A1575 ZN ZN A2000 1555 1555 2.30 LINK SG CYS A1578 ZN ZN A2000 1555 1555 2.36 LINK SG CYS A1602 ZN ZN A2000 1555 1555 2.39 LINK SG CYS A1605 ZN ZN A2000 1555 1555 2.37 LINK O HOH A2327 CO CO A3000 1555 1555 2.18 LINK O HOH A2335 CO CO A3000 1555 1555 2.21 LINK N4 K0I A2639 CO CO A3000 1555 1555 2.14 LINK C12 K0I A2639 CO CO A3000 1555 1555 3.12 LINK C8 K0I A2639 CO CO A3000 1555 1555 2.97 LINK C7 K0I A2639 CO CO A3000 1555 1555 3.01 LINK N3 K0I A2639 CO CO A3000 1555 1555 2.23 LINK C4 K0I A2639 CO CO A3000 1555 1555 3.27 LINK NE2 HIS B1390 CO CO B3000 1555 1555 2.15 LINK OE2 GLU B1392 CO CO B3000 1555 1555 2.14 LINK SG CYS B1575 ZN ZN B2000 1555 1555 2.24 LINK SG CYS B1578 ZN ZN B2000 1555 1555 2.34 LINK SG CYS B1602 ZN ZN B2000 1555 1555 2.33 LINK SG CYS B1605 ZN ZN B2000 1555 1555 2.38 LINK O HOH B2262 CO CO B3000 1555 1555 2.17 LINK O HOH B2270 CO CO B3000 1555 1555 2.28 LINK C12 K0I B2639 CO CO B3000 1555 1555 3.09 LINK N4 K0I B2639 CO CO B3000 1555 1555 2.11 LINK C8 K0I B2639 CO CO B3000 1555 1555 2.96 LINK C7 K0I B2639 CO CO B3000 1555 1555 3.00 LINK N3 K0I B2639 CO CO B3000 1555 1555 2.24 LINK C4 K0I B2639 CO CO B3000 1555 1555 3.27 SITE 1 AC1 4 CYS A1575 CYS A1578 CYS A1602 CYS A1605 SITE 1 AC2 5 HIS A1390 GLU A1392 HOH A2327 HOH A2335 SITE 2 AC2 5 K0I A2639 SITE 1 AC3 4 CYS B1575 CYS B1578 CYS B1602 CYS B1605 SITE 1 AC4 5 HIS B1390 GLU B1392 HOH B2262 HOH B2270 SITE 2 AC4 5 K0I B2639 SITE 1 AC5 17 ARG A1246 SER A1270 THR A1330 ASN A1331 SITE 2 AC5 17 TYR A1379 LYS A1381 ARG A1386 THR A1387 SITE 3 AC5 17 PRO A1388 HIS A1390 GLU A1392 ASN A1393 SITE 4 AC5 17 ASN A1400 ASN A1480 HOH A2327 HOH A2335 SITE 5 AC5 17 CO A3000 SITE 1 AC6 16 ARG B1246 SER B1270 THR B1330 TYR B1379 SITE 2 AC6 16 LYS B1381 ARG B1386 THR B1387 PRO B1388 SITE 3 AC6 16 HIS B1390 GLU B1392 ASN B1393 ASN B1400 SITE 4 AC6 16 ASN B1480 HOH B2262 HOH B2270 CO B3000 CRYST1 61.359 65.554 77.392 85.98 67.69 68.42 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016298 -0.006446 -0.007232 0.00000 SCALE2 0.000000 0.016404 0.001330 0.00000 SCALE3 0.000000 0.000000 0.014013 0.00000