HEADER HYDROLASE 28-MAY-12 4AVL TITLE INFLUENZA STRAIN PH1N1 2009 POLYMERASE SUBUNIT PA ENDONUCLEASE IN TITLE 2 COMPLEX WITH DTMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: POLYMERASE PA; COMPND 3 CHAIN: A, B, C, D; COMPND 4 FRAGMENT: ENDONUCLEASE RESIDUES 1-198; COMPND 5 SYNONYM: POLYMERASE PA SUBUNIT; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: INFLUENZA A VIRUS; SOURCE 3 ORGANISM_TAXID: 11320; SOURCE 4 STRAIN: A/CALIFORNIA/04/2009 (H1N1); SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 OTHER_DETAILS: SYNTHETIC GENE KEYWDS HYDROLASE, ENDONUCLEASE, MANGANESE-DEPENDENT EXPDTA X-RAY DIFFRACTION AUTHOR E.KOWALINSKI,C.ZUBIETA,A.WOLKERSTORFER,O.H.J.SZOLAR,R.W.H.RUIGROK, AUTHOR 2 S.CUSACK REVDAT 3 20-DEC-23 4AVL 1 REMARK LINK REVDAT 2 30-OCT-19 4AVL 1 REMARK REVDAT 1 22-AUG-12 4AVL 0 JRNL AUTH E.KOWALINSKI,C.ZUBIETA,A.WOLKERSTORFER,O.H.SZOLAR, JRNL AUTH 2 R.W.RUIGROK,S.CUSACK JRNL TITL STRUCTURAL ANALYSIS OF SPECIFIC METAL CHELATING INHIBITOR JRNL TITL 2 BINDING TO THE ENDONUCLEASE DOMAIN OF INFLUENZA PH1N1 (2009) JRNL TITL 3 POLYMERASE. JRNL REF PLOS PATHOG. V. 8 2831 2012 JRNL REFN ISSN 1553-7366 JRNL PMID 22876177 JRNL DOI 10.1371/JOURNAL.PPAT.1002831 REMARK 2 REMARK 2 RESOLUTION. 1.87 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0116 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.87 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 41.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 68174 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.200 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.235 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 3655 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.87 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.92 REMARK 3 REFLECTION IN BIN (WORKING SET) : 4648 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.76 REMARK 3 BIN R VALUE (WORKING SET) : 0.3110 REMARK 3 BIN FREE R VALUE SET COUNT : 249 REMARK 3 BIN FREE R VALUE : 0.3310 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6321 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 92 REMARK 3 SOLVENT ATOMS : 234 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 42.82 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.55000 REMARK 3 B22 (A**2) : -1.11000 REMARK 3 B33 (A**2) : 0.56000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.151 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.140 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.104 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.232 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.945 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6549 ; 0.013 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 4628 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 8802 ; 1.483 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11162 ; 0.880 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 753 ; 5.417 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 341 ;34.799 ;23.255 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1226 ;15.761 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 59 ;17.219 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 938 ; 0.090 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7108 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1447 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 0 A 197 REMARK 3 RESIDUE RANGE : A 910 A 910 REMARK 3 ORIGIN FOR THE GROUP (A): 47.5480 75.7510 13.0270 REMARK 3 T TENSOR REMARK 3 T11: 0.0854 T22: 0.1101 REMARK 3 T33: 0.0292 T12: 0.0586 REMARK 3 T13: -0.0167 T23: -0.0004 REMARK 3 L TENSOR REMARK 3 L11: 4.3390 L22: 2.0458 REMARK 3 L33: 2.7850 L12: -0.1021 REMARK 3 L13: -0.7773 L23: -0.6187 REMARK 3 S TENSOR REMARK 3 S11: -0.0619 S12: -0.5017 S13: -0.0828 REMARK 3 S21: 0.2336 S22: 0.0663 S23: 0.0317 REMARK 3 S31: 0.2506 S32: 0.2919 S33: -0.0043 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 0 B 196 REMARK 3 RESIDUE RANGE : B 910 B 910 REMARK 3 ORIGIN FOR THE GROUP (A): 62.3630 42.5300 15.4010 REMARK 3 T TENSOR REMARK 3 T11: 0.2435 T22: 0.0709 REMARK 3 T33: 0.2257 T12: 0.0341 REMARK 3 T13: 0.0766 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 4.2300 L22: 3.6887 REMARK 3 L33: 2.6044 L12: 1.1614 REMARK 3 L13: 0.4748 L23: -0.4558 REMARK 3 S TENSOR REMARK 3 S11: 0.0216 S12: 0.1529 S13: 0.4764 REMARK 3 S21: -0.1991 S22: 0.1386 S23: 0.3521 REMARK 3 S31: -0.3321 S32: -0.0743 S33: -0.1603 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 0 C 196 REMARK 3 RESIDUE RANGE : C 910 C 910 REMARK 3 ORIGIN FOR THE GROUP (A): 44.0280 43.8350 -15.5320 REMARK 3 T TENSOR REMARK 3 T11: 0.2238 T22: 0.0926 REMARK 3 T33: 0.1738 T12: -0.0608 REMARK 3 T13: 0.0109 T23: -0.0611 REMARK 3 L TENSOR REMARK 3 L11: 3.1000 L22: 5.1541 REMARK 3 L33: 2.6833 L12: -0.4438 REMARK 3 L13: 0.3723 L23: 0.2591 REMARK 3 S TENSOR REMARK 3 S11: 0.0911 S12: -0.2209 S13: 0.1756 REMARK 3 S21: 0.3511 S22: 0.0858 S23: -0.4892 REMARK 3 S31: -0.2357 S32: 0.0569 S33: -0.1769 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 0 D 197 REMARK 3 RESIDUE RANGE : D 910 D 910 REMARK 3 ORIGIN FOR THE GROUP (A): 58.2920 75.8210 -13.1620 REMARK 3 T TENSOR REMARK 3 T11: 0.0689 T22: 0.0636 REMARK 3 T33: 0.0540 T12: -0.0240 REMARK 3 T13: -0.0076 T23: -0.0189 REMARK 3 L TENSOR REMARK 3 L11: 4.6588 L22: 2.8034 REMARK 3 L33: 2.7770 L12: 0.7244 REMARK 3 L13: 0.2155 L23: 0.9908 REMARK 3 S TENSOR REMARK 3 S11: 0.0066 S12: 0.3613 S13: -0.1203 REMARK 3 S21: -0.2753 S22: 0.0138 S23: 0.0596 REMARK 3 S31: 0.1912 S32: -0.1331 S33: -0.0204 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 4AVL COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 28-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1290052666. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9765 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 71829 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.870 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.020 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 16.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.87 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.92 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 5.17 REMARK 200 R MERGE FOR SHELL (I) : 0.87000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.220 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2W69 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 45.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 25% PEG 3350 0.1 M BIS-TRIS PH 5.5 0.2 REMARK 280 M AMMONIUM SULPHATE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 27.44500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.51000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 60.62000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.51000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 27.44500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 60.62000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -5 REMARK 465 GLY A -4 REMARK 465 SER A -3 REMARK 465 GLY A -2 REMARK 465 MET A -1 REMARK 465 ASP A 55 REMARK 465 GLU A 56 REMARK 465 ARG A 57 REMARK 465 GLY A 58 REMARK 465 GLU A 59 REMARK 465 SER A 60 REMARK 465 ILE A 61 REMARK 465 ILE A 62 REMARK 465 VAL A 63 REMARK 465 GLU A 64 REMARK 465 SER A 65 REMARK 465 GLY A 66 REMARK 465 ASP A 67 REMARK 465 PRO A 68 REMARK 465 ASN A 69 REMARK 465 ALA A 70 REMARK 465 LEU A 71 REMARK 465 SER A 140 REMARK 465 GLU A 198 REMARK 465 MET B -5 REMARK 465 GLY B -4 REMARK 465 SER B -3 REMARK 465 GLY B -2 REMARK 465 MET B -1 REMARK 465 GLY B 66 REMARK 465 ASP B 67 REMARK 465 PRO B 68 REMARK 465 ASN B 69 REMARK 465 ALA B 70 REMARK 465 LYS B 139 REMARK 465 SER B 140 REMARK 465 GLY B 197 REMARK 465 GLU B 198 REMARK 465 MET C -5 REMARK 465 GLY C -4 REMARK 465 SER C -3 REMARK 465 SER C 65 REMARK 465 GLY C 66 REMARK 465 ASP C 67 REMARK 465 PRO C 68 REMARK 465 ASN C 69 REMARK 465 ALA C 70 REMARK 465 LYS C 139 REMARK 465 SER C 140 REMARK 465 GLY C 197 REMARK 465 GLU C 198 REMARK 465 MET D -5 REMARK 465 GLY D -4 REMARK 465 SER D -3 REMARK 465 GLY D -2 REMARK 465 MET D -1 REMARK 465 GLU D 198 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2004 O HOH A 2008 2.03 REMARK 500 OE2 GLU D 77 O HOH D 2025 2.08 REMARK 500 OG1 THR D 151 OE1 GLU D 153 2.16 REMARK 500 NH1 ARG C 174 O HOH C 2042 2.18 REMARK 500 O LYS A 139 N GLU A 141 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS B 41 CG HIS B 41 CD2 0.056 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 82 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG A 82 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ASP A 83 CB - CG - OD1 ANGL. DEV. = 6.9 DEGREES REMARK 500 ARG A 84 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 ARG A 84 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG D 82 NE - CZ - NH1 ANGL. DEV. = 5.1 DEGREES REMARK 500 ARG D 82 NE - CZ - NH2 ANGL. DEV. = -6.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 51 -9.36 74.10 REMARK 500 THR A 162 -60.47 67.22 REMARK 500 ASP B 50 135.12 -39.46 REMARK 500 GLU B 64 -63.10 -93.81 REMARK 500 ARG B 125 -156.53 -91.44 REMARK 500 ALA B 159 19.44 57.45 REMARK 500 THR B 162 -66.62 67.47 REMARK 500 PHE C 51 -1.81 76.72 REMARK 500 GLU C 56 20.60 -72.53 REMARK 500 ARG C 57 15.25 -148.48 REMARK 500 GLU C 59 139.63 173.27 REMARK 500 ARG C 125 -133.42 -102.12 REMARK 500 THR C 162 -65.68 72.37 REMARK 500 PHE D 51 -0.85 75.89 REMARK 500 ARG D 125 -168.69 -100.61 REMARK 500 LYS D 139 -34.56 64.49 REMARK 500 THR D 162 -61.24 66.86 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1198 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 41 NE2 REMARK 620 2 ASP A 108 OD2 93.4 REMARK 620 3 GLU A 119 OE2 174.1 86.8 REMARK 620 4 ILE A 120 O 89.6 93.0 84.6 REMARK 620 5 TMP A1200 O1P 92.1 168.0 88.8 97.7 REMARK 620 6 TMP A1200 O2P 88.3 101.4 97.4 165.5 68.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1199 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 80 OE1 REMARK 620 2 ASP A 108 OD1 90.9 REMARK 620 3 TMP A1200 O2P 96.0 91.4 REMARK 620 4 HOH A2043 O 87.8 86.3 175.6 REMARK 620 5 HOH A2044 O 86.0 172.2 96.1 86.5 REMARK 620 6 HOH A2063 O 176.8 86.3 85.6 90.5 96.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1197 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 41 NE2 REMARK 620 2 ASP B 108 OD2 91.3 REMARK 620 3 GLU B 119 OE2 177.4 88.6 REMARK 620 4 ILE B 120 O 89.1 96.3 88.4 REMARK 620 5 TMP B1199 O1P 91.8 162.0 89.1 101.4 REMARK 620 6 TMP B1199 O2P 88.2 97.6 94.4 165.9 64.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1198 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 80 OE2 REMARK 620 2 ASP B 108 OD1 90.8 REMARK 620 3 TMP B1199 O2P 104.3 89.0 REMARK 620 4 HOH B2026 O 82.7 85.0 170.9 REMARK 620 5 HOH B2027 O 93.3 159.7 109.1 75.9 REMARK 620 6 HOH B2032 O 170.8 87.3 84.7 88.1 85.5 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C1197 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 41 NE2 REMARK 620 2 ASP C 108 OD2 93.9 REMARK 620 3 GLU C 119 OE2 171.5 88.6 REMARK 620 4 ILE C 120 O 84.2 93.8 87.6 REMARK 620 5 TMP C1199 O2P 88.9 98.9 98.8 165.9 REMARK 620 6 TMP C1199 O1P 93.4 164.0 86.3 101.1 67.0 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN C1198 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU C 80 OE2 REMARK 620 2 ASP C 108 OD1 86.0 REMARK 620 3 TMP C1199 O2P 94.2 92.8 REMARK 620 4 HOH C2023 O 85.6 87.0 179.8 REMARK 620 5 HOH C2024 O 96.0 175.8 90.7 89.5 REMARK 620 6 HOH C2030 O 168.6 86.0 94.3 85.9 91.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D1198 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS D 41 NE2 REMARK 620 2 ASP D 108 OD2 92.2 REMARK 620 3 GLU D 119 OE2 173.5 90.0 REMARK 620 4 ILE D 120 O 82.4 93.0 91.4 REMARK 620 5 TMP D1200 O2P 91.7 98.5 94.1 167.2 REMARK 620 6 TMP D1200 O1P 91.5 167.5 87.7 99.3 69.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN D1199 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 80 OE1 REMARK 620 2 ASP D 108 OD1 91.2 REMARK 620 3 TMP D1200 O2P 95.3 91.6 REMARK 620 4 HOH D2010 O 85.5 173.9 93.9 REMARK 620 5 HOH D2028 O 86.3 87.2 178.0 87.5 REMARK 620 6 HOH D2043 O 173.1 88.8 91.7 93.8 86.7 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 1198 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 1199 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TMP A 1200 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 1197 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 1198 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TMP B 1199 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 1197 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN C 1198 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TMP C 1199 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN D 1198 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN D 1199 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TMP D 1200 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4AVG RELATED DB: PDB REMARK 900 INFLUENZA STRAIN PH1N1 2009 POLYMERASE SUBUNIT PA ENDONUCLEASE IN REMARK 900 COMPLEX WITH DIKETO COMPOUND 2 REMARK 999 REMARK 999 SEQUENCE REMARK 999 GENBANK NUMBER ACP44156 DBREF 4AVL A 1 198 UNP C3W5S0 C3W5S0_I09A0 1 198 DBREF 4AVL B 1 198 UNP C3W5S0 C3W5S0_I09A0 1 198 DBREF 4AVL C 1 198 UNP C3W5S0 C3W5S0_I09A0 1 198 DBREF 4AVL D 1 198 UNP C3W5S0 C3W5S0_I09A0 1 198 SEQADV 4AVL MET A -5 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL GLY A -4 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL SER A -3 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL GLY A -2 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL MET A -1 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL ALA A 0 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL MET B -5 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL GLY B -4 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL SER B -3 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL GLY B -2 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL MET B -1 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL ALA B 0 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL MET C -5 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL GLY C -4 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL SER C -3 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL GLY C -2 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL MET C -1 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL ALA C 0 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL MET D -5 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL GLY D -4 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL SER D -3 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL GLY D -2 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL MET D -1 UNP C3W5S0 EXPRESSION TAG SEQADV 4AVL ALA D 0 UNP C3W5S0 EXPRESSION TAG SEQRES 1 A 204 MET GLY SER GLY MET ALA MET GLU ASP PHE VAL ARG GLN SEQRES 2 A 204 CYS PHE ASN PRO MET ILE VAL GLU LEU ALA GLU LYS ALA SEQRES 3 A 204 MET LYS GLU TYR GLY GLU ASP PRO LYS ILE GLU THR ASN SEQRES 4 A 204 LYS PHE ALA ALA ILE CYS THR HIS LEU GLU VAL CYS PHE SEQRES 5 A 204 MET TYR SER ASP PHE HIS PHE ILE ASP GLU ARG GLY GLU SEQRES 6 A 204 SER ILE ILE VAL GLU SER GLY ASP PRO ASN ALA LEU LEU SEQRES 7 A 204 LYS HIS ARG PHE GLU ILE ILE GLU GLY ARG ASP ARG ILE SEQRES 8 A 204 MET ALA TRP THR VAL VAL ASN SER ILE CYS ASN THR THR SEQRES 9 A 204 GLY VAL GLU LYS PRO LYS PHE LEU PRO ASP LEU TYR ASP SEQRES 10 A 204 TYR LYS GLU ASN ARG PHE ILE GLU ILE GLY VAL THR ARG SEQRES 11 A 204 ARG GLU VAL HIS ILE TYR TYR LEU GLU LYS ALA ASN LYS SEQRES 12 A 204 ILE LYS SER GLU LYS THR HIS ILE HIS ILE PHE SER PHE SEQRES 13 A 204 THR GLY GLU GLU MET ALA THR LYS ALA ASP TYR THR LEU SEQRES 14 A 204 ASP GLU GLU SER ARG ALA ARG ILE LYS THR ARG LEU PHE SEQRES 15 A 204 THR ILE ARG GLN GLU MET ALA SER ARG SER LEU TRP ASP SEQRES 16 A 204 SER PHE ARG GLN SER GLU ARG GLY GLU SEQRES 1 B 204 MET GLY SER GLY MET ALA MET GLU ASP PHE VAL ARG GLN SEQRES 2 B 204 CYS PHE ASN PRO MET ILE VAL GLU LEU ALA GLU LYS ALA SEQRES 3 B 204 MET LYS GLU TYR GLY GLU ASP PRO LYS ILE GLU THR ASN SEQRES 4 B 204 LYS PHE ALA ALA ILE CYS THR HIS LEU GLU VAL CYS PHE SEQRES 5 B 204 MET TYR SER ASP PHE HIS PHE ILE ASP GLU ARG GLY GLU SEQRES 6 B 204 SER ILE ILE VAL GLU SER GLY ASP PRO ASN ALA LEU LEU SEQRES 7 B 204 LYS HIS ARG PHE GLU ILE ILE GLU GLY ARG ASP ARG ILE SEQRES 8 B 204 MET ALA TRP THR VAL VAL ASN SER ILE CYS ASN THR THR SEQRES 9 B 204 GLY VAL GLU LYS PRO LYS PHE LEU PRO ASP LEU TYR ASP SEQRES 10 B 204 TYR LYS GLU ASN ARG PHE ILE GLU ILE GLY VAL THR ARG SEQRES 11 B 204 ARG GLU VAL HIS ILE TYR TYR LEU GLU LYS ALA ASN LYS SEQRES 12 B 204 ILE LYS SER GLU LYS THR HIS ILE HIS ILE PHE SER PHE SEQRES 13 B 204 THR GLY GLU GLU MET ALA THR LYS ALA ASP TYR THR LEU SEQRES 14 B 204 ASP GLU GLU SER ARG ALA ARG ILE LYS THR ARG LEU PHE SEQRES 15 B 204 THR ILE ARG GLN GLU MET ALA SER ARG SER LEU TRP ASP SEQRES 16 B 204 SER PHE ARG GLN SER GLU ARG GLY GLU SEQRES 1 C 204 MET GLY SER GLY MET ALA MET GLU ASP PHE VAL ARG GLN SEQRES 2 C 204 CYS PHE ASN PRO MET ILE VAL GLU LEU ALA GLU LYS ALA SEQRES 3 C 204 MET LYS GLU TYR GLY GLU ASP PRO LYS ILE GLU THR ASN SEQRES 4 C 204 LYS PHE ALA ALA ILE CYS THR HIS LEU GLU VAL CYS PHE SEQRES 5 C 204 MET TYR SER ASP PHE HIS PHE ILE ASP GLU ARG GLY GLU SEQRES 6 C 204 SER ILE ILE VAL GLU SER GLY ASP PRO ASN ALA LEU LEU SEQRES 7 C 204 LYS HIS ARG PHE GLU ILE ILE GLU GLY ARG ASP ARG ILE SEQRES 8 C 204 MET ALA TRP THR VAL VAL ASN SER ILE CYS ASN THR THR SEQRES 9 C 204 GLY VAL GLU LYS PRO LYS PHE LEU PRO ASP LEU TYR ASP SEQRES 10 C 204 TYR LYS GLU ASN ARG PHE ILE GLU ILE GLY VAL THR ARG SEQRES 11 C 204 ARG GLU VAL HIS ILE TYR TYR LEU GLU LYS ALA ASN LYS SEQRES 12 C 204 ILE LYS SER GLU LYS THR HIS ILE HIS ILE PHE SER PHE SEQRES 13 C 204 THR GLY GLU GLU MET ALA THR LYS ALA ASP TYR THR LEU SEQRES 14 C 204 ASP GLU GLU SER ARG ALA ARG ILE LYS THR ARG LEU PHE SEQRES 15 C 204 THR ILE ARG GLN GLU MET ALA SER ARG SER LEU TRP ASP SEQRES 16 C 204 SER PHE ARG GLN SER GLU ARG GLY GLU SEQRES 1 D 204 MET GLY SER GLY MET ALA MET GLU ASP PHE VAL ARG GLN SEQRES 2 D 204 CYS PHE ASN PRO MET ILE VAL GLU LEU ALA GLU LYS ALA SEQRES 3 D 204 MET LYS GLU TYR GLY GLU ASP PRO LYS ILE GLU THR ASN SEQRES 4 D 204 LYS PHE ALA ALA ILE CYS THR HIS LEU GLU VAL CYS PHE SEQRES 5 D 204 MET TYR SER ASP PHE HIS PHE ILE ASP GLU ARG GLY GLU SEQRES 6 D 204 SER ILE ILE VAL GLU SER GLY ASP PRO ASN ALA LEU LEU SEQRES 7 D 204 LYS HIS ARG PHE GLU ILE ILE GLU GLY ARG ASP ARG ILE SEQRES 8 D 204 MET ALA TRP THR VAL VAL ASN SER ILE CYS ASN THR THR SEQRES 9 D 204 GLY VAL GLU LYS PRO LYS PHE LEU PRO ASP LEU TYR ASP SEQRES 10 D 204 TYR LYS GLU ASN ARG PHE ILE GLU ILE GLY VAL THR ARG SEQRES 11 D 204 ARG GLU VAL HIS ILE TYR TYR LEU GLU LYS ALA ASN LYS SEQRES 12 D 204 ILE LYS SER GLU LYS THR HIS ILE HIS ILE PHE SER PHE SEQRES 13 D 204 THR GLY GLU GLU MET ALA THR LYS ALA ASP TYR THR LEU SEQRES 14 D 204 ASP GLU GLU SER ARG ALA ARG ILE LYS THR ARG LEU PHE SEQRES 15 D 204 THR ILE ARG GLN GLU MET ALA SER ARG SER LEU TRP ASP SEQRES 16 D 204 SER PHE ARG GLN SER GLU ARG GLY GLU HET MN A1198 1 HET MN A1199 1 HET TMP A1200 21 HET MN B1197 1 HET MN B1198 1 HET TMP B1199 21 HET MN C1197 1 HET MN C1198 1 HET TMP C1199 21 HET MN D1198 1 HET MN D1199 1 HET TMP D1200 21 HETNAM MN MANGANESE (II) ION HETNAM TMP THYMIDINE-5'-PHOSPHATE FORMUL 5 MN 8(MN 2+) FORMUL 7 TMP 4(C10 H15 N2 O8 P) FORMUL 17 HOH *234(H2 O) HELIX 1 1 ALA A 0 PHE A 9 1 10 HELIX 2 2 ASN A 10 GLY A 25 1 16 HELIX 3 3 GLU A 31 ASP A 50 1 20 HELIX 4 4 ASP A 83 GLY A 99 1 17 HELIX 5 5 GLU A 126 LYS A 139 1 14 HELIX 6 6 LYS A 158 ASP A 160 5 3 HELIX 7 7 ASP A 164 ARG A 185 1 22 HELIX 8 8 LEU A 187 SER A 194 1 8 HELIX 9 9 ALA B 0 PHE B 9 1 10 HELIX 10 10 ASN B 10 GLY B 25 1 16 HELIX 11 11 GLU B 31 ASP B 50 1 20 HELIX 12 12 ASP B 83 GLY B 99 1 17 HELIX 13 13 GLU B 126 ASN B 136 1 11 HELIX 14 14 LYS B 158 ASP B 160 5 3 HELIX 15 15 ASP B 164 ARG B 185 1 22 HELIX 16 16 LEU B 187 GLU B 195 1 9 HELIX 17 17 ALA C 0 PHE C 9 1 10 HELIX 18 18 ASN C 10 TYR C 24 1 15 HELIX 19 19 GLU C 31 ASP C 50 1 20 HELIX 20 20 ASP C 83 GLY C 99 1 17 HELIX 21 21 GLU C 126 ILE C 138 1 13 HELIX 22 22 LYS C 158 ASP C 160 5 3 HELIX 23 23 ASP C 164 ARG C 185 1 22 HELIX 24 24 LEU C 187 SER C 194 1 8 HELIX 25 25 ALA D 0 PHE D 9 1 10 HELIX 26 26 ASN D 10 TYR D 24 1 15 HELIX 27 27 GLU D 31 ASP D 50 1 20 HELIX 28 28 ASP D 83 GLY D 99 1 17 HELIX 29 29 GLU D 126 LYS D 139 1 14 HELIX 30 30 LYS D 158 ASP D 160 5 3 HELIX 31 31 ASP D 164 ARG D 185 1 22 HELIX 32 32 LEU D 187 SER D 194 1 8 SHEET 1 AA 5 PHE A 76 ILE A 78 0 SHEET 2 AA 5 LEU A 109 ASP A 111 -1 O TYR A 110 N GLU A 77 SHEET 3 AA 5 ARG A 116 THR A 123 -1 O ARG A 116 N ASP A 111 SHEET 4 AA 5 HIS A 144 SER A 149 1 O HIS A 144 N GLU A 119 SHEET 5 AA 5 GLU A 154 ALA A 156 -1 O MET A 155 N ILE A 147 SHEET 1 BA 3 SER B 60 ILE B 62 0 SHEET 2 BA 3 HIS B 52 ILE B 54 -1 O PHE B 53 N ILE B 61 SHEET 3 BA 3 LYS B 73 HIS B 74 -1 O LYS B 73 N ILE B 54 SHEET 1 BB 5 PHE B 76 ILE B 78 0 SHEET 2 BB 5 LEU B 109 ASP B 111 -1 O TYR B 110 N GLU B 77 SHEET 3 BB 5 ARG B 116 THR B 123 -1 O ARG B 116 N ASP B 111 SHEET 4 BB 5 HIS B 144 SER B 149 1 O HIS B 144 N GLU B 119 SHEET 5 BB 5 GLU B 154 ALA B 156 -1 O MET B 155 N ILE B 147 SHEET 1 CA 3 SER C 60 ILE C 62 0 SHEET 2 CA 3 HIS C 52 ILE C 54 -1 O PHE C 53 N ILE C 61 SHEET 3 CA 3 LYS C 73 HIS C 74 -1 O LYS C 73 N ILE C 54 SHEET 1 CB 5 PHE C 76 ILE C 78 0 SHEET 2 CB 5 LEU C 109 ASP C 111 -1 O TYR C 110 N GLU C 77 SHEET 3 CB 5 ARG C 116 THR C 123 -1 O ARG C 116 N ASP C 111 SHEET 4 CB 5 HIS C 144 SER C 149 1 O HIS C 144 N GLU C 119 SHEET 5 CB 5 GLU C 154 ALA C 156 -1 O MET C 155 N ILE C 147 SHEET 1 DA 3 SER D 60 ILE D 62 0 SHEET 2 DA 3 HIS D 52 ILE D 54 -1 O PHE D 53 N ILE D 61 SHEET 3 DA 3 LYS D 73 HIS D 74 -1 O LYS D 73 N ILE D 54 SHEET 1 DB 5 PHE D 76 ILE D 78 0 SHEET 2 DB 5 LEU D 109 ASP D 111 -1 O TYR D 110 N GLU D 77 SHEET 3 DB 5 ARG D 116 THR D 123 -1 O ARG D 116 N ASP D 111 SHEET 4 DB 5 HIS D 144 SER D 149 1 O HIS D 144 N GLU D 119 SHEET 5 DB 5 GLU D 154 ALA D 156 -1 O MET D 155 N ILE D 147 LINK NE2 HIS A 41 MN MN A1198 1555 1555 2.30 LINK OE1 GLU A 80 MN MN A1199 1555 1555 2.06 LINK OD2 ASP A 108 MN MN A1198 1555 1555 2.06 LINK OD1 ASP A 108 MN MN A1199 1555 1555 2.09 LINK OE2 GLU A 119 MN MN A1198 1555 1555 2.04 LINK O ILE A 120 MN MN A1198 1555 1555 2.13 LINK MN MN A1198 O1P TMP A1200 1555 1555 2.20 LINK MN MN A1198 O2P TMP A1200 1555 1555 2.20 LINK MN MN A1199 O2P TMP A1200 1555 1555 2.08 LINK MN MN A1199 O HOH A2043 1555 1555 2.06 LINK MN MN A1199 O HOH A2044 1555 1555 2.08 LINK MN MN A1199 O HOH A2063 1555 1555 2.09 LINK NE2 HIS B 41 MN MN B1197 1555 1555 2.30 LINK OE2 GLU B 80 MN MN B1198 1555 1555 2.35 LINK OD2 ASP B 108 MN MN B1197 1555 1555 2.16 LINK OD1 ASP B 108 MN MN B1198 1555 1555 2.02 LINK OE2 GLU B 119 MN MN B1197 1555 1555 2.23 LINK O ILE B 120 MN MN B1197 1555 1555 1.96 LINK MN MN B1197 O1P TMP B1199 1555 1555 2.38 LINK MN MN B1197 O2P TMP B1199 1555 1555 2.13 LINK MN MN B1198 O2P TMP B1199 1555 1555 2.15 LINK MN MN B1198 O HOH B2026 1555 1555 2.08 LINK MN MN B1198 O HOH B2027 1555 1555 1.71 LINK MN MN B1198 O HOH B2032 1555 1555 2.16 LINK NE2 HIS C 41 MN MN C1197 1555 1555 2.30 LINK OE2 GLU C 80 MN MN C1198 1555 1555 2.36 LINK OD2 ASP C 108 MN MN C1197 1555 1555 2.01 LINK OD1 ASP C 108 MN MN C1198 1555 1555 2.09 LINK OE2 GLU C 119 MN MN C1197 1555 1555 2.23 LINK O ILE C 120 MN MN C1197 1555 1555 2.14 LINK MN MN C1197 O2P TMP C1199 1555 1555 2.39 LINK MN MN C1197 O1P TMP C1199 1555 1555 2.20 LINK MN MN C1198 O2P TMP C1199 1555 1555 2.07 LINK MN MN C1198 O HOH C2023 1555 1555 2.01 LINK MN MN C1198 O HOH C2024 1555 1555 2.05 LINK MN MN C1198 O HOH C2030 1555 1555 2.11 LINK NE2 HIS D 41 MN MN D1198 1555 1555 2.21 LINK OE1 GLU D 80 MN MN D1199 1555 1555 2.02 LINK OD2 ASP D 108 MN MN D1198 1555 1555 2.02 LINK OD1 ASP D 108 MN MN D1199 1555 1555 2.06 LINK OE2 GLU D 119 MN MN D1198 1555 1555 2.15 LINK O ILE D 120 MN MN D1198 1555 1555 2.03 LINK MN MN D1198 O2P TMP D1200 1555 1555 2.36 LINK MN MN D1198 O1P TMP D1200 1555 1555 2.19 LINK MN MN D1199 O2P TMP D1200 1555 1555 1.98 LINK MN MN D1199 O HOH D2010 1555 1555 2.12 LINK MN MN D1199 O HOH D2028 1555 1555 1.93 LINK MN MN D1199 O HOH D2043 1555 1555 2.14 SITE 1 AC1 5 HIS A 41 ASP A 108 GLU A 119 ILE A 120 SITE 2 AC1 5 TMP A1200 SITE 1 AC2 6 GLU A 80 ASP A 108 TMP A1200 HOH A2043 SITE 2 AC2 6 HOH A2044 HOH A2063 SITE 1 AC3 17 TYR A 24 GLU A 26 LYS A 34 ILE A 38 SITE 2 AC3 17 HIS A 41 GLU A 80 ASP A 108 GLU A 119 SITE 3 AC3 17 ILE A 120 LYS A 134 MN A1198 MN A1199 SITE 4 AC3 17 HOH A2044 HOH A2063 HOH A2070 HOH A2071 SITE 5 AC3 17 HOH A2085 SITE 1 AC4 5 HIS B 41 ASP B 108 GLU B 119 ILE B 120 SITE 2 AC4 5 TMP B1199 SITE 1 AC5 6 GLU B 80 ASP B 108 TMP B1199 HOH B2026 SITE 2 AC5 6 HOH B2027 HOH B2032 SITE 1 AC6 12 TYR B 24 LYS B 34 HIS B 41 GLU B 80 SITE 2 AC6 12 ASP B 108 GLU B 119 ILE B 120 LYS B 134 SITE 3 AC6 12 MN B1197 MN B1198 HOH B2032 HOH B2036 SITE 1 AC7 5 HIS C 41 ASP C 108 GLU C 119 ILE C 120 SITE 2 AC7 5 TMP C1199 SITE 1 AC8 6 GLU C 80 ASP C 108 TMP C1199 HOH C2023 SITE 2 AC8 6 HOH C2024 HOH C2030 SITE 1 AC9 17 TYR C 24 LYS C 34 ILE C 38 HIS C 41 SITE 2 AC9 17 GLU C 80 ASP C 108 GLU C 119 ILE C 120 SITE 3 AC9 17 LYS C 134 MN C1197 MN C1198 HOH C2008 SITE 4 AC9 17 HOH C2024 HOH C2030 HOH C2034 HOH C2035 SITE 5 AC9 17 HOH C2043 SITE 1 BC1 5 HIS D 41 ASP D 108 GLU D 119 ILE D 120 SITE 2 BC1 5 TMP D1200 SITE 1 BC2 6 GLU D 80 ASP D 108 TMP D1200 HOH D2010 SITE 2 BC2 6 HOH D2028 HOH D2043 SITE 1 BC3 20 LYS A 104 TYR D 24 GLU D 26 LYS D 34 SITE 2 BC3 20 ILE D 38 HIS D 41 GLU D 80 ASP D 108 SITE 3 BC3 20 GLU D 119 ILE D 120 LYS D 134 MN D1198 SITE 4 BC3 20 MN D1199 HOH D2009 HOH D2010 HOH D2043 SITE 5 BC3 20 HOH D2051 HOH D2053 HOH D2056 HOH D2066 CRYST1 54.890 121.240 129.020 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018218 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008248 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007751 0.00000