HEADER TRANSFERASE 30-MAY-12 4AW2 TITLE CRYSTAL STRUCTURE OF CDC42 BINDING PROTEIN KINASE ALPHA (MRCK ALPHA) COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE/THREONINE-PROTEIN KINASE MRCK ALPHA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: KINASE DOMAIN, RESIDUES 2-424; COMPND 5 SYNONYM: CDC42-BINDING PROTEIN KINASE ALPHA, MYOTONIC DYSTROPHY COMPND 6 KINASE-RELATED CDC42-BINDING KINASE ALPHA, MRCK ALPHA, MYOTONIC COMPND 7 DYSTROPHY PROTEIN KINASE-LIKE ALPHA CDC42 BINDING PROTEIN KINASE COMPND 8 ALPHA; COMPND 9 EC: 2.7.11.1; COMPND 10 ENGINEERED: YES; COMPND 11 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: NORWAY RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PNIC-CTH0 KEYWDS TRANSFERASE, CDC42BPA EXPDTA X-RAY DIFFRACTION AUTHOR J.M.ELKINS,J.R.C.MUNIZ,I.TAN,T.LEUNG,L.LAFANECHERE,R.PRUDENT,K.ABDUL AUTHOR 2 AZEEZ,M.SZKLARZ,C.PHILLIPS,J.WANG,F.VON DELFT,C.BOUNTRA,A.EDWARDS, AUTHOR 3 S.KNAPP REVDAT 3 20-DEC-23 4AW2 1 REMARK REVDAT 2 24-JAN-18 4AW2 1 AUTHOR JRNL REVDAT 1 20-JUN-12 4AW2 0 JRNL AUTH J.M.ELKINS,J.R.C.MUNIZ,I.TAN,T.LEUNG,L.LAFANECHERE, JRNL AUTH 2 R.PRUDENT,K.ABDUL AZEEZ,M.SZKLARZ,C.PHILLIPS,J.WANG, JRNL AUTH 3 F.VON DELFT,C.BOUNTRA,A.EDWARDS,S.KNAPP JRNL TITL CDC42 BINDING PROTEIN KINASE ALPHA (MRCK ALPHA) JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 89.72 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 96.7 REMARK 3 NUMBER OF REFLECTIONS : 47784 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.170 REMARK 3 R VALUE (WORKING SET) : 0.169 REMARK 3 FREE R VALUE : 0.193 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2038 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 7187 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.70 REMARK 3 BIN R VALUE (WORKING SET) : 0.2960 REMARK 3 BIN FREE R VALUE SET COUNT : 143 REMARK 3 BIN FREE R VALUE : 0.3150 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3185 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 45 REMARK 3 SOLVENT ATOMS : 211 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.43 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -1.13000 REMARK 3 B22 (A**2) : 2.80000 REMARK 3 B33 (A**2) : -2.14000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.59000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.095 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.091 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.067 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.183 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.963 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3345 ; 0.010 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2290 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4528 ; 1.310 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5554 ; 0.898 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 408 ; 5.547 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 163 ;36.033 ;24.049 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 577 ;12.390 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;18.250 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 484 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3724 ; 0.006 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 710 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 23 REMARK 3 ORIGIN FOR THE GROUP (A): -7.9380 23.0160 -9.0550 REMARK 3 T TENSOR REMARK 3 T11: 0.1038 T22: 0.1296 REMARK 3 T33: 0.1125 T12: 0.0793 REMARK 3 T13: 0.0026 T23: -0.0310 REMARK 3 L TENSOR REMARK 3 L11: 1.8378 L22: 1.3730 REMARK 3 L33: 10.8755 L12: -0.5721 REMARK 3 L13: -0.0081 L23: 0.5399 REMARK 3 S TENSOR REMARK 3 S11: -0.0086 S12: -0.0081 S13: 0.1384 REMARK 3 S21: 0.1037 S22: -0.0778 S23: 0.1228 REMARK 3 S31: -0.3044 S32: -0.5612 S33: 0.0864 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 24 A 73 REMARK 3 ORIGIN FOR THE GROUP (A): 5.5590 6.9200 4.4260 REMARK 3 T TENSOR REMARK 3 T11: 0.1381 T22: 0.1005 REMARK 3 T33: 0.0947 T12: 0.0462 REMARK 3 T13: 0.0008 T23: 0.0291 REMARK 3 L TENSOR REMARK 3 L11: 2.5463 L22: 1.0403 REMARK 3 L33: 5.3025 L12: -0.5232 REMARK 3 L13: -1.2250 L23: 0.8140 REMARK 3 S TENSOR REMARK 3 S11: -0.0437 S12: -0.0864 S13: -0.4133 REMARK 3 S21: 0.0800 S22: -0.0929 S23: 0.0105 REMARK 3 S31: 0.6729 S32: 0.5239 S33: 0.1366 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 74 A 157 REMARK 3 ORIGIN FOR THE GROUP (A): -9.0610 12.9670 22.2740 REMARK 3 T TENSOR REMARK 3 T11: 0.1082 T22: 0.0612 REMARK 3 T33: 0.0356 T12: -0.0596 REMARK 3 T13: 0.0061 T23: 0.0272 REMARK 3 L TENSOR REMARK 3 L11: 2.7446 L22: 0.9191 REMARK 3 L33: 1.7022 L12: -0.1871 REMARK 3 L13: -0.3947 L23: 0.5117 REMARK 3 S TENSOR REMARK 3 S11: 0.0578 S12: -0.2530 S13: -0.1889 REMARK 3 S21: 0.1238 S22: -0.0512 S23: 0.0246 REMARK 3 S31: 0.1032 S32: -0.0413 S33: -0.0065 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 158 A 346 REMARK 3 ORIGIN FOR THE GROUP (A): -34.4440 16.5140 25.1560 REMARK 3 T TENSOR REMARK 3 T11: 0.0874 T22: 0.0864 REMARK 3 T33: 0.0692 T12: 0.0116 REMARK 3 T13: -0.0185 T23: 0.0269 REMARK 3 L TENSOR REMARK 3 L11: 2.8315 L22: 1.2446 REMARK 3 L33: 1.7996 L12: 0.2591 REMARK 3 L13: -0.3318 L23: 0.2387 REMARK 3 S TENSOR REMARK 3 S11: 0.0195 S12: 0.0684 S13: -0.0455 REMARK 3 S21: -0.0284 S22: -0.0290 S23: 0.1674 REMARK 3 S31: -0.0709 S32: -0.2527 S33: 0.0095 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 347 A 392 REMARK 3 ORIGIN FOR THE GROUP (A): -20.0620 28.5340 33.0330 REMARK 3 T TENSOR REMARK 3 T11: 0.2618 T22: 0.1232 REMARK 3 T33: 0.1911 T12: -0.0628 REMARK 3 T13: 0.0263 T23: -0.0257 REMARK 3 L TENSOR REMARK 3 L11: 7.0347 L22: 1.6763 REMARK 3 L33: 3.9395 L12: -2.9568 REMARK 3 L13: 3.7453 L23: -1.4514 REMARK 3 S TENSOR REMARK 3 S11: -0.0952 S12: -0.0739 S13: 0.5589 REMARK 3 S21: 0.0220 S22: -0.0853 S23: -0.0571 REMARK 3 S31: -0.2318 S32: 0.0895 S33: 0.1804 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 393 A 417 REMARK 3 ORIGIN FOR THE GROUP (A): -6.2280 16.0760 8.1790 REMARK 3 T TENSOR REMARK 3 T11: 0.0433 T22: 0.0474 REMARK 3 T33: 0.0099 T12: -0.0098 REMARK 3 T13: 0.0036 T23: -0.0107 REMARK 3 L TENSOR REMARK 3 L11: 3.4246 L22: 5.1682 REMARK 3 L33: 4.0632 L12: 2.0183 REMARK 3 L13: -0.7265 L23: -0.5311 REMARK 3 S TENSOR REMARK 3 S11: 0.0282 S12: 0.1571 S13: 0.0362 REMARK 3 S21: -0.0905 S22: 0.0096 S23: -0.0087 REMARK 3 S31: -0.1604 S32: -0.1779 S33: -0.0378 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 4AW2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-MAY-12. REMARK 100 THE DEPOSITION ID IS D_1290052711. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 21-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9173 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49832 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 28.910 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 7.400 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.7 REMARK 200 DATA REDUNDANCY IN SHELL : 7.00 REMARK 200 R MERGE FOR SHELL (I) : 0.90000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.300 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2VD5 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.34 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M KSCN, 0.1M BISTRISPROPANE PH 8.5, REMARK 280 20% PEG3350, 10% ETHYLENE GLYCOL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 53.37200 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.59350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 53.37200 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 24.59350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7380 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33350 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -15.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2018 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, ASP 254 TO GLY REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 375 REMARK 465 ASP A 376 REMARK 465 CYS A 377 REMARK 465 LEU A 378 REMARK 465 LYS A 379 REMARK 465 ASN A 380 REMARK 465 SER A 381 REMARK 465 GLU A 382 REMARK 465 THR A 383 REMARK 465 MET A 384 REMARK 465 PRO A 385 REMARK 465 PRO A 386 REMARK 465 PRO A 387 REMARK 465 THR A 388 REMARK 465 HIS A 389 REMARK 465 THR A 390 REMARK 465 ALA A 391 REMARK 465 PHE A 392 REMARK 465 VAL A 418 REMARK 465 THR A 419 REMARK 465 ALA A 420 REMARK 465 GLY A 421 REMARK 465 PRO A 422 REMARK 465 THR A 423 REMARK 465 SER A 424 REMARK 465 ALA A 425 REMARK 465 GLU A 426 REMARK 465 ASN A 427 REMARK 465 LEU A 428 REMARK 465 TYR A 429 REMARK 465 PHE A 430 REMARK 465 GLN A 431 REMARK 465 SER A 432 REMARK 465 HIS A 433 REMARK 465 HIS A 434 REMARK 465 HIS A 435 REMARK 465 HIS A 436 REMARK 465 HIS A 437 REMARK 465 HIS A 438 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 8 NE CZ NH1 NH2 REMARK 470 ARG A 49 CD NE CZ NH1 NH2 REMARK 470 LYS A 115 CD CE NZ REMARK 470 GLU A 118 CD OE1 OE2 REMARK 470 LYS A 135 NZ REMARK 470 GLU A 228 CG CD OE1 OE2 REMARK 470 GLN A 233 CD OE1 NE2 REMARK 470 LYS A 256 CG CD CE NZ REMARK 470 ARG A 258 CZ NH1 NH2 REMARK 470 LYS A 298 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 98 -26.36 76.01 REMARK 500 ASP A 146 -159.00 -138.71 REMARK 500 HIS A 196 37.51 71.68 REMARK 500 ASP A 201 52.12 -146.04 REMARK 500 ASP A 219 81.27 57.10 REMARK 500 LYS A 256 -69.40 -26.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 22E A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1418 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1419 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1420 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1421 DBREF 4AW2 A 2 424 UNP O54874 MRCKA_RAT 2 424 SEQADV 4AW2 ALA A 425 UNP O54874 EXPRESSION TAG SEQADV 4AW2 GLU A 426 UNP O54874 EXPRESSION TAG SEQADV 4AW2 ASN A 427 UNP O54874 EXPRESSION TAG SEQADV 4AW2 LEU A 428 UNP O54874 EXPRESSION TAG SEQADV 4AW2 TYR A 429 UNP O54874 EXPRESSION TAG SEQADV 4AW2 PHE A 430 UNP O54874 EXPRESSION TAG SEQADV 4AW2 GLN A 431 UNP O54874 EXPRESSION TAG SEQADV 4AW2 SER A 432 UNP O54874 EXPRESSION TAG SEQADV 4AW2 HIS A 433 UNP O54874 EXPRESSION TAG SEQADV 4AW2 HIS A 434 UNP O54874 EXPRESSION TAG SEQADV 4AW2 HIS A 435 UNP O54874 EXPRESSION TAG SEQADV 4AW2 HIS A 436 UNP O54874 EXPRESSION TAG SEQADV 4AW2 HIS A 437 UNP O54874 EXPRESSION TAG SEQADV 4AW2 HIS A 438 UNP O54874 EXPRESSION TAG SEQADV 4AW2 GLY A 254 UNP O54874 ASP 254 ENGINEERED MUTATION SEQRES 1 A 437 SER GLY GLU VAL ARG LEU ARG GLN LEU GLU GLN PHE ILE SEQRES 2 A 437 LEU ASP GLY PRO ALA GLN THR ASN GLY GLN CYS PHE SER SEQRES 3 A 437 VAL GLU THR LEU LEU ASP ILE LEU ILE CYS LEU TYR ASP SEQRES 4 A 437 GLU CYS ASN ASN SER PRO LEU ARG ARG GLU LYS ASN ILE SEQRES 5 A 437 LEU GLU TYR LEU GLU TRP ALA LYS PRO PHE THR SER LYS SEQRES 6 A 437 VAL LYS GLN MET ARG LEU HIS ARG GLU ASP PHE GLU ILE SEQRES 7 A 437 LEU LYS VAL ILE GLY ARG GLY ALA PHE GLY GLU VAL ALA SEQRES 8 A 437 VAL VAL LYS LEU LYS ASN ALA ASP LYS VAL PHE ALA MET SEQRES 9 A 437 LYS ILE LEU ASN LYS TRP GLU MET LEU LYS ARG ALA GLU SEQRES 10 A 437 THR ALA CYS PHE ARG GLU GLU ARG ASP VAL LEU VAL ASN SEQRES 11 A 437 GLY ASP SER LYS TRP ILE THR THR LEU HIS TYR ALA PHE SEQRES 12 A 437 GLN ASP ASP ASN ASN LEU TYR LEU VAL MET ASP TYR TYR SEQRES 13 A 437 VAL GLY GLY ASP LEU LEU THR LEU LEU SER LYS PHE GLU SEQRES 14 A 437 ASP ARG LEU PRO GLU GLU MET ALA ARG PHE TYR LEU ALA SEQRES 15 A 437 GLU MET VAL ILE ALA ILE ASP SER VAL HIS GLN LEU HIS SEQRES 16 A 437 TYR VAL HIS ARG ASP ILE LYS PRO ASP ASN ILE LEU MET SEQRES 17 A 437 ASP MET ASN GLY HIS ILE ARG LEU ALA ASP PHE GLY SER SEQRES 18 A 437 CYS LEU LYS LEU MET GLU ASP GLY THR VAL GLN SER SER SEQRES 19 A 437 VAL ALA VAL GLY THR PRO ASP TYR ILE SER PRO GLU ILE SEQRES 20 A 437 LEU GLN ALA MET GLU GLY GLY LYS GLY ARG TYR GLY PRO SEQRES 21 A 437 GLU CYS ASP TRP TRP SER LEU GLY VAL CYS MET TYR GLU SEQRES 22 A 437 MET LEU TYR GLY GLU THR PRO PHE TYR ALA GLU SER LEU SEQRES 23 A 437 VAL GLU THR TYR GLY LYS ILE MET ASN HIS LYS GLU ARG SEQRES 24 A 437 PHE GLN PHE PRO THR GLN VAL THR ASP VAL SER GLU ASN SEQRES 25 A 437 ALA LYS ASP LEU ILE ARG ARG LEU ILE CYS SER ARG GLU SEQRES 26 A 437 HIS ARG LEU GLY GLN ASN GLY ILE GLU ASP PHE LYS LYS SEQRES 27 A 437 HIS PRO PHE PHE SER GLY ILE ASP TRP ASP ASN ILE ARG SEQRES 28 A 437 ASN CYS GLU ALA PRO TYR ILE PRO GLU VAL SER SER PRO SEQRES 29 A 437 THR ASP THR SER ASN PHE ASP VAL ASP ASP ASP CYS LEU SEQRES 30 A 437 LYS ASN SER GLU THR MET PRO PRO PRO THR HIS THR ALA SEQRES 31 A 437 PHE SER GLY HIS HIS LEU PRO PHE VAL GLY PHE THR TYR SEQRES 32 A 437 THR SER SER CYS VAL LEU SER ASP ARG SER CYS LEU ARG SEQRES 33 A 437 VAL THR ALA GLY PRO THR SER ALA GLU ASN LEU TYR PHE SEQRES 34 A 437 GLN SER HIS HIS HIS HIS HIS HIS HET 22E A 500 29 HET EDO A1418 4 HET EDO A1419 4 HET EDO A1420 4 HET EDO A1421 4 HETNAM 22E 5,11-DIMETHYL-1-OXO-2,6-DIHYDRO-1H-PYRIDO[4,3- HETNAM 2 22E B]CARBAZOL-9-YL BENZOATE HETNAM EDO 1,2-ETHANEDIOL HETSYN EDO ETHYLENE GLYCOL FORMUL 2 22E C24 H18 N2 O3 FORMUL 3 EDO 4(C2 H6 O2) FORMUL 7 HOH *211(H2 O) HELIX 1 1 SER A 2 GLY A 17 1 16 HELIX 2 2 PRO A 18 THR A 21 5 4 HELIX 3 3 SER A 27 ASN A 44 1 18 HELIX 4 4 GLU A 50 ARG A 71 1 22 HELIX 5 5 HIS A 73 GLU A 75 5 3 HELIX 6 6 LYS A 110 ARG A 116 1 7 HELIX 7 7 CYS A 121 GLY A 132 1 12 HELIX 8 8 ASP A 161 LYS A 168 1 8 HELIX 9 9 PRO A 174 LEU A 195 1 22 HELIX 10 10 LYS A 203 ASP A 205 5 3 HELIX 11 11 THR A 240 ILE A 244 5 5 HELIX 12 12 SER A 245 GLY A 254 1 10 HELIX 13 13 PRO A 261 GLY A 278 1 18 HELIX 14 14 SER A 286 ASN A 296 1 11 HELIX 15 15 ASN A 296 PHE A 301 1 6 HELIX 16 16 SER A 311 ARG A 320 1 10 HELIX 17 17 SER A 324 ARG A 328 5 5 HELIX 18 18 ILE A 334 LYS A 339 1 6 HELIX 19 19 HIS A 340 SER A 344 5 5 HELIX 20 20 ASN A 350 CYS A 354 5 5 HELIX 21 21 HIS A 396 VAL A 400 5 5 SHEET 1 AA 6 PHE A 77 ARG A 85 0 SHEET 2 AA 6 GLY A 89 LEU A 96 -1 O VAL A 91 N ILE A 83 SHEET 3 AA 6 VAL A 102 ASN A 109 -1 O PHE A 103 N VAL A 94 SHEET 4 AA 6 ASN A 149 MET A 154 -1 O LEU A 150 N LEU A 108 SHEET 5 AA 6 LEU A 140 GLN A 145 -1 N HIS A 141 O VAL A 153 SHEET 6 AA 6 TYR A 404 THR A 405 -1 O TYR A 404 N ALA A 143 SHEET 1 AB 2 TYR A 197 VAL A 198 0 SHEET 2 AB 2 LEU A 224 LYS A 225 -1 O LEU A 224 N VAL A 198 SHEET 1 AC 2 ILE A 207 MET A 209 0 SHEET 2 AC 2 ILE A 215 LEU A 217 -1 O ARG A 216 N LEU A 208 SHEET 1 AD 2 VAL A 232 GLN A 233 0 SHEET 2 AD 2 ARG A 258 TYR A 259 -1 O TYR A 259 N VAL A 232 SITE 1 AC1 12 ASP A 33 ILE A 36 LYS A 68 GLN A 69 SITE 2 AC1 12 ARG A 71 HIS A 73 GLN A 145 ASP A 146 SITE 3 AC1 12 ASP A 147 LYS A 339 HOH A2099 HOH A2210 SITE 1 AC2 6 TYR A 56 TRP A 59 ARG A 123 LEU A 397 SITE 2 AC2 6 PRO A 398 HOH A2202 SITE 1 AC3 7 LYS A 106 LEU A 108 ALA A 120 CYS A 121 SITE 2 AC3 7 GLU A 125 GLY A 221 HOH A2063 SITE 1 AC4 4 ALA A 104 TYR A 156 TYR A 157 HOH A2105 SITE 1 AC5 5 GLU A 29 ARG A 71 CYS A 408 LEU A 410 SITE 2 AC5 5 HOH A2206 CRYST1 106.744 49.187 97.762 90.00 113.40 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009368 0.000000 0.004054 0.00000 SCALE2 0.000000 0.020331 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011146 0.00000