HEADER MEMBRANE PROTEIN 22-JUN-12 4AYX TITLE STRUCTURE OF THE HUMAN MITOCHONDRIAL ABC TRANSPORTER, ABCB10 (ROD FORM TITLE 2 B) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ATP-BINDING CASSETTE SUB-FAMILY B MEMBER 10; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ABC TRANSPORTER, RESIDUES 152-738; COMPND 5 SYNONYM: ATP-BINDING CASSETTE TRANSPORTER 10, ABC TRANSPORTER 10 COMPND 6 PROTEIN, MITOCHONDRIAL ATP-BINDING CASSETTE 2, M-ABC2; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA; SOURCE 6 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 7108; SOURCE 8 EXPRESSION_SYSTEM_CELL_LINE: SF9; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PFB-LIC-BSE KEYWDS MEMBRANE PROTEIN, MITOCHONDRIAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR A.C.W.PIKE,C.A.SHINTRE,Q.LI,J.KIM,F.VON DELFT,A.J.BARR,S.DAS, AUTHOR 2 A.CHAIKUAD,X.XIA,A.QUIGLEY,Y.DONG,L.DONG,T.KROJER,M.VOLLMAR, AUTHOR 3 J.R.C.MUNIZ,J.E.BRAY,G.BERRIDGE,R.CHALK,O.GILEADI,N.BURGESS-BROWN, AUTHOR 4 L.SHRESTHA,S.GOUBIN,J.YANG,P.MAHAJAN,S.MUKHOPADHYAY,A.N.BULLOCK, AUTHOR 5 C.H.ARROWSMITH,J.WEIGELT,C.BOUNTRA,A.M.EDWARDS,E.P.CARPENTER REVDAT 7 20-DEC-23 4AYX 1 REMARK LINK REVDAT 6 24-JAN-18 4AYX 1 AUTHOR JRNL REVDAT 5 25-MAR-15 4AYX 1 JRNL REVDAT 4 26-JUN-13 4AYX 1 JRNL REVDAT 3 12-JUN-13 4AYX 1 JRNL REVDAT 2 05-JUN-13 4AYX 1 AUTHOR JRNL REVDAT 1 11-JUL-12 4AYX 0 JRNL AUTH C.A.SHINTRE,A.C.W.PIKE,Q.LI,J.KIM,A.J.BARR,S.GOUBIN, JRNL AUTH 2 L.SHRESTHA,J.YANG,G.BERRIDGE,J.ROSS,P.J.STANSFELD, JRNL AUTH 3 M.S.P.SANSOM,A.M.EDWARDS,C.BOUNTRA,B.D.MARSDEN,F.VON DELFT, JRNL AUTH 4 A.N.BULLOCK,O.GILEADI,N.A.BURGESS-BROWN,E.P.CARPENTER JRNL TITL STRUCTURES OF ABCB10, A HUMAN ATP-BINDING CASSETTE JRNL TITL 2 TRANSPORTER IN APO- AND NUCLEOTIDE-BOUND STATES JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 9710 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 23716676 JRNL DOI 10.1073/PNAS.1217042110 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.2 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 20998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.225 REMARK 3 R VALUE (WORKING SET) : 0.223 REMARK 3 FREE R VALUE : 0.267 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.190 REMARK 3 FREE R VALUE TEST SET COUNT : 1090 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 11 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 3.04 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.59 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2778 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2598 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2617 REMARK 3 BIN R VALUE (WORKING SET) : 0.2577 REMARK 3 BIN FREE R VALUE : 0.2937 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.80 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 161 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4191 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 195 REMARK 3 SOLVENT ATOMS : 33 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 96.44 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 90.84 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 14.02350 REMARK 3 B22 (A**2) : 14.02350 REMARK 3 B33 (A**2) : -28.04700 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.525 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.681 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.344 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.749 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.355 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.894 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.864 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 4469 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 6058 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 2099 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 74 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 674 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 4469 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 611 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : 4 ; 1.000 ; HARMONIC REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 5058 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 0.97 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.29 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 2.89 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESID(154 - 724) REMARK 3 ORIGIN FOR THE GROUP (A): -40.3783 46.4598 4.9489 REMARK 3 T TENSOR REMARK 3 T11: 0.0715 T22: -0.0668 REMARK 3 T33: -0.1142 T12: 0.1008 REMARK 3 T13: -0.0659 T23: 0.0685 REMARK 3 L TENSOR REMARK 3 L11: 1.0990 L22: 2.0213 REMARK 3 L33: 0.0184 L12: -0.0583 REMARK 3 L13: -0.4142 L23: -0.0349 REMARK 3 S TENSOR REMARK 3 S11: 0.0880 S12: -0.0697 S13: 0.0992 REMARK 3 S21: -0.0827 S22: 0.0539 S23: 0.3160 REMARK 3 S31: -0.0021 S32: -0.0263 S33: -0.1420 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REFINEMENT NOTE 1: IDEAL-DIST CONTACT T REMARK 3 CONTACT SETUP. RESIDUE TYPES WITHOUT CCP4 ATOM TYPE IN LIBRARY= REMARK 3 MG NUMBER OF ATOMS WITH PROPER CCP4 ATOM TYPE=4427. NUMBER OF REMARK 3 ATOMS WITH APPROX DEFAULT CCP4 ATOM TYPE=0. NUMBER TREATED BY REMARK 3 BAD NON- BONDED CONTACTS=1. NCS TARGET REPRESENTATION: LSSR (- REMARK 3 TARGET_ REMARK 4 REMARK 4 4AYX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 22-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1290053009. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 9.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I24 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9686 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 21011 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 39.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 3.400 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.60000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 1.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4AYT REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.56 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM CHLORIDE, 0.1 M GLYCINE REMARK 280 PH 9.5, 33% (V/V) PEG 300. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 16.85500 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 33.71000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 33.71000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 16.85500 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13970 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 54880 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -119.6 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 -0.866025 0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 16.85500 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 151 REMARK 465 ALA A 152 REMARK 465 GLY A 153 REMARK 465 ILE A 725 REMARK 465 TYR A 726 REMARK 465 ARG A 727 REMARK 465 LYS A 728 REMARK 465 LEU A 729 REMARK 465 MET A 730 REMARK 465 ASN A 731 REMARK 465 LYS A 732 REMARK 465 GLN A 733 REMARK 465 SER A 734 REMARK 465 PHE A 735 REMARK 465 ILE A 736 REMARK 465 SER A 737 REMARK 465 ALA A 738 REMARK 465 ALA A 739 REMARK 465 GLU A 740 REMARK 465 ASN A 741 REMARK 465 LEU A 742 REMARK 465 TYR A 743 REMARK 465 PHE A 744 REMARK 465 GLN A 745 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LEU A 154 CG CD1 CD2 REMARK 470 GLU A 156 CG CD OE1 OE2 REMARK 470 ARG A 158 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 169 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 209 CG OD1 OD2 REMARK 470 ARG A 213 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 288 CD OE1 OE2 REMARK 470 ARG A 337 NE CZ NH1 NH2 REMARK 470 LYS A 376 CG CD CE NZ REMARK 470 LYS A 380 CG CD CE NZ REMARK 470 LYS A 390 CG CD CE NZ REMARK 470 PHE A 439 CG CD1 CD2 CE1 CE2 CZ REMARK 470 GLU A 470 CG CD OE1 OE2 REMARK 470 GLU A 472 CG CD OE1 OE2 REMARK 470 GLU A 479 CG CD OE1 OE2 REMARK 470 GLU A 485 CG CD OE1 OE2 REMARK 470 LYS A 486 CG CD CE NZ REMARK 470 LYS A 495 CG CD CE NZ REMARK 470 GLU A 506 CG CD OE1 OE2 REMARK 470 GLU A 576 CG CD OE1 OE2 REMARK 470 LEU A 633 CG CD1 CD2 REMARK 470 SER A 662 OG REMARK 470 LEU A 664 CG CD1 CD2 REMARK 470 ASP A 665 CG OD1 OD2 REMARK 470 GLU A 667 CG CD OE1 OE2 REMARK 470 GLU A 669 CG CD OE1 OE2 REMARK 470 TYR A 670 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 GLN A 673 CG CD OE1 NE2 REMARK 470 GLU A 674 CG CD OE1 OE2 REMARK 470 ARG A 691 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 692 CG CD1 CD2 REMARK 470 THR A 694 OG1 CG2 REMARK 470 LYS A 696 CG CD CE NZ REMARK 470 ASN A 697 CG OD1 ND2 REMARK 470 ASP A 705 CG OD1 OD2 REMARK 470 LYS A 708 CG CD CE NZ REMARK 470 GLU A 711 CG CD OE1 OE2 REMARK 470 LYS A 714 CG CD CE NZ REMARK 470 GLU A 716 CG CD OE1 OE2 REMARK 470 GLU A 717 CG CD OE1 OE2 REMARK 470 LEU A 718 CG CD1 CD2 REMARK 470 LEU A 719 CG CD1 CD2 REMARK 470 LYS A 721 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 276 -64.30 -95.32 REMARK 500 THR A 287 -99.61 -117.09 REMARK 500 ASP A 512 63.83 63.23 REMARK 500 VAL A 627 -157.82 -104.81 REMARK 500 GLU A 669 -19.03 -49.06 REMARK 500 SER A 720 47.08 -87.41 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 CDL A 1721 REMARK 610 CDL A 1726 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 801 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 534 OG REMARK 620 2 GLN A 575 OE1 133.8 REMARK 620 3 ACP A 900 O2B 71.9 149.2 REMARK 620 4 ACP A 900 O3G 139.0 84.4 67.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACP A 900 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GLY A 1717 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LMT A 1720 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CDL A 1721 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE LMT A 1724 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CDL A 1726 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4AYT RELATED DB: PDB REMARK 900 STRUCTURE OF THE HUMAN MITOCHONDRIAL ABC TRANSPORTER, ABCB10 REMARK 900 RELATED ID: 4AYW RELATED DB: PDB REMARK 900 STRUCTURE OF THE HUMAN MITOCHONDRIAL ABC TRANSPORTER, ABCB10 (PLATE REMARK 900 FORM) DBREF 4AYX A 152 738 UNP Q9NRK6 ABCBA_HUMAN 152 738 SEQADV 4AYX MET A 151 UNP Q9NRK6 EXPRESSION TAG SEQADV 4AYX ALA A 739 UNP Q9NRK6 EXPRESSION TAG SEQADV 4AYX GLU A 740 UNP Q9NRK6 EXPRESSION TAG SEQADV 4AYX ASN A 741 UNP Q9NRK6 EXPRESSION TAG SEQADV 4AYX LEU A 742 UNP Q9NRK6 EXPRESSION TAG SEQADV 4AYX TYR A 743 UNP Q9NRK6 EXPRESSION TAG SEQADV 4AYX PHE A 744 UNP Q9NRK6 EXPRESSION TAG SEQADV 4AYX GLN A 745 UNP Q9NRK6 EXPRESSION TAG SEQRES 1 A 595 MET ALA GLY LEU PRO GLU ALA ARG LYS LEU LEU GLY LEU SEQRES 2 A 595 ALA TYR PRO GLU ARG ARG ARG LEU ALA ALA ALA VAL GLY SEQRES 3 A 595 PHE LEU THR MET SER SER VAL ILE SER MET SER ALA PRO SEQRES 4 A 595 PHE PHE LEU GLY LYS ILE ILE ASP VAL ILE TYR THR ASN SEQRES 5 A 595 PRO THR VAL ASP TYR SER ASP ASN LEU THR ARG LEU CYS SEQRES 6 A 595 LEU GLY LEU SER ALA VAL PHE LEU CYS GLY ALA ALA ALA SEQRES 7 A 595 ASN ALA ILE ARG VAL TYR LEU MET GLN THR SER GLY GLN SEQRES 8 A 595 ARG ILE VAL ASN ARG LEU ARG THR SER LEU PHE SER SER SEQRES 9 A 595 ILE LEU ARG GLN GLU VAL ALA PHE PHE ASP LYS THR ARG SEQRES 10 A 595 THR GLY GLU LEU ILE ASN ARG LEU SER SER ASP THR ALA SEQRES 11 A 595 LEU LEU GLY ARG SER VAL THR GLU ASN LEU SER ASP GLY SEQRES 12 A 595 LEU ARG ALA GLY ALA GLN ALA SER VAL GLY ILE SER MET SEQRES 13 A 595 MET PHE PHE VAL SER PRO ASN LEU ALA THR PHE VAL LEU SEQRES 14 A 595 SER VAL VAL PRO PRO VAL SER ILE ILE ALA VAL ILE TYR SEQRES 15 A 595 GLY ARG TYR LEU ARG LYS LEU THR LYS VAL THR GLN ASP SEQRES 16 A 595 SER LEU ALA GLN ALA THR GLN LEU ALA GLU GLU ARG ILE SEQRES 17 A 595 GLY ASN VAL ARG THR VAL ARG ALA PHE GLY LYS GLU MET SEQRES 18 A 595 THR GLU ILE GLU LYS TYR ALA SER LYS VAL ASP HIS VAL SEQRES 19 A 595 MET GLN LEU ALA ARG LYS GLU ALA PHE ALA ARG ALA GLY SEQRES 20 A 595 PHE PHE GLY ALA THR GLY LEU SER GLY ASN LEU ILE VAL SEQRES 21 A 595 LEU SER VAL LEU TYR LYS GLY GLY LEU LEU MET GLY SER SEQRES 22 A 595 ALA HIS MET THR VAL GLY GLU LEU SER SER PHE LEU MET SEQRES 23 A 595 TYR ALA PHE TRP VAL GLY ILE SER ILE GLY GLY LEU SER SEQRES 24 A 595 SER PHE TYR SER GLU LEU MET LYS GLY LEU GLY ALA GLY SEQRES 25 A 595 GLY ARG LEU TRP GLU LEU LEU GLU ARG GLU PRO LYS LEU SEQRES 26 A 595 PRO PHE ASN GLU GLY VAL ILE LEU ASN GLU LYS SER PHE SEQRES 27 A 595 GLN GLY ALA LEU GLU PHE LYS ASN VAL HIS PHE ALA TYR SEQRES 28 A 595 PRO ALA ARG PRO GLU VAL PRO ILE PHE GLN ASP PHE SER SEQRES 29 A 595 LEU SER ILE PRO SER GLY SER VAL THR ALA LEU VAL GLY SEQRES 30 A 595 PRO SER GLY SER GLY LYS SER THR VAL LEU SER LEU LEU SEQRES 31 A 595 LEU ARG LEU TYR ASP PRO ALA SER GLY THR ILE SER LEU SEQRES 32 A 595 ASP GLY HIS ASP ILE ARG GLN LEU ASN PRO VAL TRP LEU SEQRES 33 A 595 ARG SER LYS ILE GLY THR VAL SER GLN GLU PRO ILE LEU SEQRES 34 A 595 PHE SER CYS SER ILE ALA GLU ASN ILE ALA TYR GLY ALA SEQRES 35 A 595 ASP ASP PRO SER SER VAL THR ALA GLU GLU ILE GLN ARG SEQRES 36 A 595 VAL ALA GLU VAL ALA ASN ALA VAL ALA PHE ILE ARG ASN SEQRES 37 A 595 PHE PRO GLN GLY PHE ASN THR VAL VAL GLY GLU LYS GLY SEQRES 38 A 595 VAL LEU LEU SER GLY GLY GLN LYS GLN ARG ILE ALA ILE SEQRES 39 A 595 ALA ARG ALA LEU LEU LYS ASN PRO LYS ILE LEU LEU LEU SEQRES 40 A 595 ASP GLU ALA THR SER ALA LEU ASP ALA GLU ASN GLU TYR SEQRES 41 A 595 LEU VAL GLN GLU ALA LEU ASP ARG LEU MET ASP GLY ARG SEQRES 42 A 595 THR VAL LEU VAL ILE ALA HIS ARG LEU SER THR ILE LYS SEQRES 43 A 595 ASN ALA ASN MET VAL ALA VAL LEU ASP GLN GLY LYS ILE SEQRES 44 A 595 THR GLU TYR GLY LYS HIS GLU GLU LEU LEU SER LYS PRO SEQRES 45 A 595 ASN GLY ILE TYR ARG LYS LEU MET ASN LYS GLN SER PHE SEQRES 46 A 595 ILE SER ALA ALA GLU ASN LEU TYR PHE GLN HET GLY A1717 5 HET MG A 801 1 HET ACP A 900 31 HET LMT A1720 35 HET CDL A1721 74 HET LMT A1724 35 HET CDL A1726 14 HETNAM GLY GLYCINE HETNAM MG MAGNESIUM ION HETNAM ACP PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER HETNAM LMT DODECYL-BETA-D-MALTOSIDE HETNAM CDL CARDIOLIPIN HETSYN ACP ADENOSINE-5'-[BETA, GAMMA-METHYLENE]TRIPHOSPHATE HETSYN CDL DIPHOSPHATIDYL GLYCEROL; BIS-(1,2-DIACYL-SN-GLYCERO-3- HETSYN 2 CDL PHOSPHO)-1',3'-SN-GLYCEROL FORMUL 2 GLY C2 H5 N O2 FORMUL 3 MG MG 2+ FORMUL 4 ACP C11 H18 N5 O12 P3 FORMUL 5 LMT 2(C24 H46 O11) FORMUL 6 CDL 2(C81 H156 O17 P2 2-) FORMUL 9 HOH *33(H2 O) HELIX 1 1 LEU A 154 TYR A 165 1 12 HELIX 2 2 GLU A 167 MET A 186 1 20 HELIX 3 3 SER A 187 ASN A 202 1 16 HELIX 4 4 TYR A 207 GLN A 258 1 52 HELIX 5 5 GLU A 259 THR A 266 1 8 HELIX 6 6 ARG A 267 VAL A 286 1 20 HELIX 7 7 THR A 287 SER A 311 1 25 HELIX 8 8 SER A 311 PHE A 367 1 57 HELIX 9 9 LYS A 369 SER A 423 1 55 HELIX 10 10 THR A 427 GLU A 470 1 44 HELIX 11 11 SER A 534 LEU A 541 1 8 HELIX 12 12 ASN A 562 LYS A 569 1 8 HELIX 13 13 SER A 583 TYR A 590 1 8 HELIX 14 14 THR A 599 ALA A 610 1 12 HELIX 15 15 ALA A 612 PHE A 619 1 8 HELIX 16 16 GLN A 621 THR A 625 5 5 HELIX 17 17 SER A 635 ASN A 651 1 17 HELIX 18 18 ASP A 665 ASP A 681 1 17 HELIX 19 19 ARG A 691 ALA A 698 1 8 HELIX 20 20 LYS A 714 SER A 720 1 7 SHEET 1 AA 4 PRO A 508 ILE A 517 0 SHEET 2 AA 4 LEU A 492 ALA A 500 -1 O LEU A 492 N ILE A 517 SHEET 3 AA 4 SER A 548 LEU A 553 -1 O SER A 548 N HIS A 498 SHEET 4 AA 4 HIS A 556 ASP A 557 -1 O HIS A 556 N LEU A 553 SHEET 1 AB 6 ILE A 570 VAL A 573 0 SHEET 2 AB 6 ILE A 654 ASP A 658 1 O ILE A 654 N GLY A 571 SHEET 3 AB 6 THR A 684 ILE A 688 1 O THR A 684 N LEU A 655 SHEET 4 AB 6 VAL A 522 VAL A 526 1 O THR A 523 N VAL A 687 SHEET 5 AB 6 MET A 700 LEU A 704 1 O MET A 700 N ALA A 524 SHEET 6 AB 6 ILE A 709 GLY A 713 -1 N THR A 710 O VAL A 703 LINK OG SER A 534 MG MG A 801 1555 1555 2.54 LINK OE1 GLN A 575 MG MG A 801 1555 1555 2.69 LINK MG MG A 801 O2B ACP A 900 1555 1555 2.85 LINK MG MG A 801 O3G ACP A 900 1555 1555 2.67 SITE 1 AC1 4 SER A 534 GLN A 575 ASP A 658 ACP A 900 SITE 1 AC2 11 TYR A 501 ILE A 509 SER A 529 GLY A 530 SITE 2 AC2 11 SER A 531 GLY A 532 LYS A 533 SER A 534 SITE 3 AC2 11 THR A 535 GLN A 575 MG A 801 SITE 1 AC3 3 ARG A 170 TYR A 234 ARG A 242 SITE 1 AC4 8 ASP A 197 TYR A 200 THR A 201 LEU A 218 SITE 2 AC4 8 MET A 421 GLY A 422 THR A 427 VAL A 428 SITE 1 AC5 7 ASN A 313 THR A 316 PHE A 317 SER A 405 SITE 2 AC5 7 LYS A 416 LMT A1724 HOH A2033 SITE 1 AC6 10 SER A 405 ILE A 409 SER A 412 TYR A 415 SITE 2 AC6 10 LYS A 416 LEU A 420 SER A 423 HIS A 425 SITE 3 AC6 10 CDL A1721 HOH A2033 SITE 1 AC7 3 ILE A 184 ASN A 229 ASN A 407 CRYST1 180.136 180.136 50.565 90.00 90.00 120.00 P 31 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005551 0.003205 0.000000 0.00000 SCALE2 0.000000 0.006410 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019777 0.00000