HEADER HYDROLASE 23-JUN-12 4AZ7 TITLE DIFFERENTIAL INHIBITION OF THE TANDEM GH20 CATALYTIC MODULES IN THE TITLE 2 PNEUMOCOCCAL EXO-BETA-D-N-ACETYLGLUCOSAMINIDASE, STRH COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-N-ACETYLHEXOSAMINIDASE; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: CATALYTIC MODULE, RESIDUES 181-613; COMPND 5 SYNONYM: GLYCOSIDE HYDROLASE 20; COMPND 6 EC: 3.2.1.52; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 170187; SOURCE 4 STRAIN: TIGR4; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET28A KEYWDS HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR B.PLUVINAGE,K.A.STUBBS,D.J.VOCADLO,A.B.BORASTON REVDAT 5 20-DEC-23 4AZ7 1 HETSYN SHEET REVDAT 4 29-JUL-20 4AZ7 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE REVDAT 3 13-NOV-13 4AZ7 1 JRNL REVDAT 2 30-OCT-13 4AZ7 1 JRNL REVDAT 1 10-JUL-13 4AZ7 0 JRNL AUTH B.PLUVINAGE,K.A.STUBBS,D.J.VOCADLO,A.B.BORASTON JRNL TITL INHIBITION OF THE FAMILY 20 GLYCOSIDE HYDROLASE CATALYTIC JRNL TITL 2 MODULES IN THE STREPTOCOCCUS PNEUMONIAE JRNL TITL 3 EXO-BETA-D-N-ACETYLGLUCOSAMINIDASE, STRH. JRNL REF ORG.BIOMOL.CHEM. V. 11 7907 2013 JRNL REFN ISSN 1477-0520 JRNL PMID 24132305 JRNL DOI 10.1039/C3OB41579A REMARK 2 REMARK 2 RESOLUTION. 1.70 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.70 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.12 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 51018 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.144 REMARK 3 R VALUE (WORKING SET) : 0.142 REMARK 3 FREE R VALUE : 0.172 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2730 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.70 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.74 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3535 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.87 REMARK 3 BIN R VALUE (WORKING SET) : 0.1780 REMARK 3 BIN FREE R VALUE SET COUNT : 192 REMARK 3 BIN FREE R VALUE : 0.2130 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3391 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 74 REMARK 3 SOLVENT ATOMS : 583 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.35 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.04000 REMARK 3 B22 (A**2) : -0.03000 REMARK 3 B33 (A**2) : 0.07000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.086 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.085 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.050 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.499 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.970 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.958 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3695 ; 0.011 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5010 ; 1.356 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 466 ; 5.847 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 178 ;35.336 ;25.449 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 623 ;12.139 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;17.069 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 531 ; 0.089 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2866 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT. U VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 4AZ7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-JUN-12. REMARK 100 THE DEPOSITION ID IS D_1290053031. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL9-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53749 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 35.390 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 9.800 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 9.60 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2YL6 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.18 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 39.25000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 54.90000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 56.25000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 39.25000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 54.90000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 56.25000 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 39.25000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 54.90000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 56.25000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 39.25000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 54.90000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 56.25000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2198 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2350 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2351 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 206 O HOH A 2042 2.03 REMARK 500 O HOH A 2464 O HOH A 2465 2.09 REMARK 500 OE1 GLU A 254 O HOH A 2109 2.11 REMARK 500 O HOH A 2246 O HOH A 2247 2.13 REMARK 500 OD1 ASP A 477 O HOH A 2419 2.16 REMARK 500 OD2 ASP A 329 O HOH A 2247 2.16 REMARK 500 OE1 GLU A 543 O HOH A 2480 2.17 REMARK 500 O HOH A 2164 O HOH A 2173 2.18 REMARK 500 O HOH A 2247 O HOH A 2332 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 225 94.25 -164.20 REMARK 500 ASP A 226 -75.98 66.34 REMARK 500 TYR A 261 117.11 -161.42 REMARK 500 LYS A 350 -12.91 70.62 REMARK 500 GLU A 503 16.47 59.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1617 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 259 OD2 REMARK 620 2 HOH A2132 O 87.5 REMARK 620 3 HOH A2133 O 90.5 89.7 REMARK 620 4 HOH A2134 O 89.9 177.2 91.2 REMARK 620 5 HOH A2135 O 88.3 88.2 177.6 90.9 REMARK 620 6 HOH A2579 O 178.9 92.7 88.4 89.9 92.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1622 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2501 O REMARK 620 2 HOH A2502 O 82.2 REMARK 620 3 HOH A2581 O 173.4 92.9 REMARK 620 4 HOH A2582 O 91.4 170.8 92.8 REMARK 620 5 HOH A2583 O 87.7 87.9 87.6 85.1 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2YL5 RELATED DB: PDB REMARK 900 INHIBITION OF THE PNEUMOCOCCAL VIRULENCE FACTOR STRH AND MOLECULAR REMARK 900 INSIGHTS INTO N-GLYCAN RECOGNITION AND HYDROLYSIS REMARK 900 RELATED ID: 2YL6 RELATED DB: PDB REMARK 900 INHIBITION OF THE PNEUMOCOCCAL VIRULENCE FACTOR STRH AND MOLECULAR REMARK 900 INSIGHTS INTO N-GLYCAN RECOGNITION AND HYDROLYSIS REMARK 900 RELATED ID: 2YL8 RELATED DB: PDB REMARK 900 INHIBITION OF THE PNEUMOCOCCAL VIRULENCE FACTOR STRH AND MOLECULAR REMARK 900 INSIGHTS INTO N-GLYCAN RECOGNITION AND HYDROLYSIS REMARK 900 RELATED ID: 2YL9 RELATED DB: PDB REMARK 900 INHIBITION OF THE PNEUMOCOCCAL VIRULENCE FACTOR STRH AND MOLECULAR REMARK 900 INSIGHTS INTO N-GLYCAN RECOGNITION AND HYDROLYSIS REMARK 900 RELATED ID: 2YLA RELATED DB: PDB REMARK 900 INHIBITION OF THE PNEUMOCOCCAL VIRULENCE FACTOR STRH AND MOLECULAR REMARK 900 INSIGHTS INTO N-GLYCAN RECOGNITION AND HYDROLYSIS REMARK 900 RELATED ID: 2YLL RELATED DB: PDB REMARK 900 INHIBITION OF THE PNEUMOCOCCAL VIRULENCE FACTOR STRH AND MOLECULAR REMARK 900 INSIGHTS INTO N-GLYCAN RECOGNITION AND HYDROLYSIS REMARK 900 RELATED ID: 4AZ5 RELATED DB: PDB REMARK 900 DIFFERENTIAL INHIBITION OF THE TANDEM GH20 CATALYTIC MODULES IN THE REMARK 900 PNEUMOCOCCAL EXO-BETA-D-N- ACETYLGLUCOSAMINIDASE, STRH REMARK 900 RELATED ID: 4AZ6 RELATED DB: PDB REMARK 900 DIFFERENTIAL INHIBITION OF THE TANDEM GH20 CATALYTIC MODULES IN THE REMARK 900 PNEUMOCOCCAL EXO-BETA-D-N- ACETYLGLUCOSAMINIDASE, STRH REMARK 900 RELATED ID: 4AZB RELATED DB: PDB REMARK 900 DIFFERENTIAL INHIBITION OF THE TANDEM GH20 CATALYTIC MODULES IN THE REMARK 900 PNEUMOCOCCAL EXO-BETA-D-N- ACETYLGLUCOSAMINIDASE, STRH REMARK 900 RELATED ID: 4AZC RELATED DB: PDB REMARK 900 DIFFERENTIAL INHIBITION OF THE TANDEM GH20 CATALYTIC MODULES IN THE REMARK 900 PNEUMOCOCCAL EXO-BETA-D-N- ACETYLGLUCOSAMINIDASE, STRH REMARK 900 RELATED ID: 4AZG RELATED DB: PDB REMARK 900 DIFFERENTIAL INHIBITION OF THE TANDEM GH20 CATALYTIC MODULES IN THE REMARK 900 PNEUMOCOCCAL EXO-BETA-D-N- ACETYLGLUCOSAMINIDASE, STRH REMARK 900 RELATED ID: 4AZH RELATED DB: PDB REMARK 900 DIFFERENTIAL INHIBITION OF THE TANDEM GH20 CATALYTIC MODULES IN THE REMARK 900 PNEUMOCOCCAL EXO-BETA-D-N- ACETYLGLUCOSAMINIDASE, STRH REMARK 900 RELATED ID: 4AZI RELATED DB: PDB REMARK 900 DIFFERENTIAL INHIBITION OF THE TANDEM GH20 CATALYTIC MODULES IN THE REMARK 900 PNEUMOCOCCAL EXO-BETA-D-N- ACETYLGLUCOSAMINIDASE, STRH DBREF 4AZ7 A 181 613 UNP P49610 STRH_STRPN 181 613 SEQRES 1 A 433 ASN GLU LYS LEU ALA LYS LYS LYS ILE VAL SER ILE ASP SEQRES 2 A 433 ALA GLY ARG LYS TYR PHE SER PRO GLU GLN LEU LYS GLU SEQRES 3 A 433 ILE ILE ASP LYS ALA LYS HIS TYR GLY TYR THR ASP LEU SEQRES 4 A 433 HIS LEU LEU VAL GLY ASN ASP GLY LEU ARG PHE MET LEU SEQRES 5 A 433 ASP ASP MET SER ILE THR ALA ASN GLY LYS THR TYR ALA SEQRES 6 A 433 SER ASP ASP VAL LYS ARG ALA ILE GLU LYS GLY THR ASN SEQRES 7 A 433 ASP TYR TYR ASN ASP PRO ASN GLY ASN HIS LEU THR GLU SEQRES 8 A 433 SER GLN MET THR ASP LEU ILE ASN TYR ALA LYS ASP LYS SEQRES 9 A 433 GLY ILE GLY LEU ILE PRO THR VAL ASN SER PRO GLY HIS SEQRES 10 A 433 MET ASP ALA ILE LEU ASN ALA MET LYS GLU LEU GLY ILE SEQRES 11 A 433 GLN ASN PRO ASN PHE SER TYR PHE GLY LYS LYS SER ALA SEQRES 12 A 433 ARG THR VAL ASP LEU ASP ASN GLU GLN ALA VAL ALA PHE SEQRES 13 A 433 THR LYS ALA LEU ILE ASP LYS TYR ALA ALA TYR PHE ALA SEQRES 14 A 433 LYS LYS THR GLU ILE PHE ASN ILE GLY LEU ASP GLU TYR SEQRES 15 A 433 ALA ASN ASP ALA THR ASP ALA LYS GLY TRP SER VAL LEU SEQRES 16 A 433 GLN ALA ASP LYS TYR TYR PRO ASN GLU GLY TYR PRO VAL SEQRES 17 A 433 LYS GLY TYR GLU LYS PHE ILE ALA TYR ALA ASN ASP LEU SEQRES 18 A 433 ALA ARG ILE VAL LYS SER HIS GLY LEU LYS PRO MET ALA SEQRES 19 A 433 PHE ASN ASP GLY ILE TYR TYR ASN SER ASP THR SER PHE SEQRES 20 A 433 GLY SER PHE ASP LYS ASP ILE ILE VAL SER MET TRP THR SEQRES 21 A 433 GLY GLY TRP GLY GLY TYR ASP VAL ALA SER SER LYS LEU SEQRES 22 A 433 LEU ALA GLU LYS GLY HIS GLN ILE LEU ASN THR ASN ASP SEQRES 23 A 433 ALA TRP TYR TYR VAL LEU GLY ARG ASN ALA ASP GLY GLN SEQRES 24 A 433 GLY TRP TYR ASN LEU ASP GLN GLY LEU ASN GLY ILE LYS SEQRES 25 A 433 ASN THR PRO ILE THR SER VAL PRO LYS THR GLU GLY ALA SEQRES 26 A 433 ASP ILE PRO ILE ILE GLY GLY MET VAL ALA ALA TRP ALA SEQRES 27 A 433 ASP THR PRO SER ALA ARG TYR SER PRO SER ARG LEU PHE SEQRES 28 A 433 LYS LEU MET ARG HIS PHE ALA ASN ALA ASN ALA GLU TYR SEQRES 29 A 433 PHE ALA ALA ASP TYR GLU SER ALA GLU GLN ALA LEU ASN SEQRES 30 A 433 GLU VAL PRO LYS ASP LEU ASN ARG TYR THR ALA GLU SER SEQRES 31 A 433 VAL THR ALA VAL LYS GLU ALA GLU LYS ALA ILE ARG SER SEQRES 32 A 433 LEU ASP SER ASN LEU SER ARG ALA GLN GLN ASP THR ILE SEQRES 33 A 433 ASP GLN ALA ILE ALA LYS LEU GLN GLU THR VAL ASN ASN SEQRES 34 A 433 LEU THR LEU THR HET LOG A1614 16 HET LOG A1615 16 HET P15 A1616 20 HET MG A1617 1 HET EDO A1618 4 HET EDO A1619 4 HET EDO A1620 4 HET EDO A1621 4 HET MG A1622 1 HET EDO A1623 4 HETNAM LOG N-ACETYLGLUCOSAMINONO-1,5-LACTONE (Z)-OXIME HETNAM P15 2,5,8,11,14,17-HEXAOXANONADECAN-19-OL HETNAM MG MAGNESIUM ION HETNAM EDO 1,2-ETHANEDIOL HETSYN LOG LOGNAC HETSYN EDO ETHYLENE GLYCOL FORMUL 2 LOG 2(C8 H14 N2 O6) FORMUL 4 P15 C13 H28 O7 FORMUL 5 MG 2(MG 2+) FORMUL 6 EDO 5(C2 H6 O2) FORMUL 12 HOH *583(H2 O) HELIX 1 1 SER A 200 GLY A 215 1 16 HELIX 2 2 ALA A 245 TYR A 261 1 17 HELIX 3 3 GLU A 271 LYS A 284 1 14 HELIX 4 4 MET A 298 GLY A 309 1 12 HELIX 5 5 ASN A 330 ALA A 349 1 20 HELIX 6 6 LYS A 370 TYR A 381 1 12 HELIX 7 7 LYS A 389 HIS A 408 1 20 HELIX 8 8 TYR A 420 ASP A 424 5 5 HELIX 9 9 SER A 450 LYS A 457 1 8 HELIX 10 10 ASN A 465 TYR A 469 5 5 HELIX 11 11 ASN A 483 THR A 494 1 12 HELIX 12 12 SER A 526 ASN A 541 1 16 HELIX 13 13 TYR A 549 GLU A 558 1 10 HELIX 14 14 THR A 567 SER A 583 1 17 HELIX 15 15 GLN A 592 ASN A 609 1 18 SHEET 1 AA10 LYS A 187 ASP A 193 0 SHEET 2 AA10 GLY A 511 TRP A 517 1 O GLY A 512 N ILE A 189 SHEET 3 AA10 TYR A 470 VAL A 471 1 O TYR A 470 N TRP A 517 SHEET 4 AA10 ASP A 218 GLY A 224 0 SHEET 5 AA10 GLY A 287 SER A 294 0 SHEET 6 AA10 ILE A 354 GLY A 358 0 SHEET 7 AA10 LYS A 411 PHE A 415 0 SHEET 8 AA10 ILE A 435 MET A 438 0 SHEET 9 AA10 ILE A 461 ASN A 463 0 SHEET 10 AA10 LYS A 187 ASP A 193 1 O LYS A 187 N GLY A 512 SHEET 1 AB 2 PHE A 230 MET A 231 0 SHEET 2 AB 2 LEU A 269 THR A 270 1 O LEU A 269 N MET A 231 SHEET 1 AC 2 ILE A 237 ALA A 239 0 SHEET 2 AC 2 LYS A 242 TYR A 244 -1 O LYS A 242 N ALA A 239 SHEET 1 AD 2 ASN A 314 TYR A 317 0 SHEET 2 AD 2 LYS A 320 VAL A 326 -1 O LYS A 320 N TYR A 317 LINK OD2 ASP A 259 MG MG A1617 1555 1555 2.06 LINK MG MG A1617 O HOH A2132 1555 1555 2.12 LINK MG MG A1617 O HOH A2133 1555 1555 2.13 LINK MG MG A1617 O HOH A2134 1555 1555 2.07 LINK MG MG A1617 O HOH A2135 1555 1555 2.08 LINK MG MG A1617 O HOH A2579 1555 1555 2.09 LINK MG MG A1622 O HOH A2501 1555 1555 2.14 LINK MG MG A1622 O HOH A2502 1555 1555 2.16 LINK MG MG A1622 O HOH A2581 1555 1555 2.13 LINK MG MG A1622 O HOH A2582 1555 1555 2.10 LINK MG MG A1622 O HOH A2583 1555 1555 2.08 CISPEP 1 SER A 294 PRO A 295 0 -9.15 CRYST1 78.500 109.800 112.500 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012739 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009107 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008889 0.00000