data_4B2P # _entry.id 4B2P # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4B2P pdb_00004b2p 10.2210/pdb4b2p/pdb PDBE EBI-53398 ? ? WWPDB D_1290053398 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1PZN unspecified 'RAD51 (RADA)' PDB 4A6P unspecified 'RADA C-TERMINAL ATPASE DOMAIN FROM PYROCOCCUS FURIOSUS' PDB 4A6X unspecified 'RADA C-TERMINAL ATPASE DOMAIN FROM PYROCOCCUS FURIOSUS BOUND TO ATP' PDB 4A74 unspecified 'RADA C-TERMINAL ATPASE DOMAIN FROM PYROCOCCUS FURIOSUS BOUND TO AMPPNP' PDB 4A7O unspecified 'RADA C-TERMINAL ATPASE DOMAIN FROM PYROCOCCUS FURIOSUS BOUND TO ADP' PDB 4B2I unspecified 'HUMANISED MONOMERIC RADA IN COMPLEX WITH INDAZOLE' PDB 4B2L unspecified 'HUMANISED MONOMERIC RADA IN COMPLEX WITH L-METHYLESTER TRYPTOPHAN' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4B2P _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2012-07-17 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Marsh, M.E.' 1 'Ehebauer, M.T.' 2 'Scott, D.' 3 'Abell, C.' 4 'Blundell, T.L.' 5 'Hyvonen, M.' 6 # _citation.id primary _citation.title 'ATP Half-Sites in Rada and Rad51 Recombinases Bind Nucleotides' _citation.journal_abbrev 'FEBS Open Bio' _citation.journal_volume 6 _citation.page_first 372 _citation.page_last ? _citation.year 2016 _citation.journal_id_ASTM ? _citation.country NE _citation.journal_id_ISSN 2211-5463 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 27419043 _citation.pdbx_database_id_DOI 10.1002/2211-5463.12052 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Marsh, M.E.' 1 ? primary 'Scott, D.E.' 2 ? primary 'Ehebauer, M.T.' 3 ? primary 'Abell, C.' 4 ? primary 'Blundell, T.L.' 5 ? primary 'Hyvonen, M.' 6 ? # _cell.entry_id 4B2P _cell.length_a 40.320 _cell.length_b 62.020 _cell.length_c 87.170 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? # _symmetry.entry_id 4B2P _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'DNA REPAIR AND RECOMBINATION PROTEIN RADA' 25510.150 1 ? YES 'C-TERMINAL ATPASE DOMAIN, RESIDUES 108-349' ? 2 non-polymer syn "GUANOSINE-5'-TRIPHOSPHATE" 523.180 1 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 5 water nat water 18.015 117 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MATIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTENTFRPERIREIA QNRGLDPDEVLKHIYVARAFNSNHQMLLVQQAEDKIKELLNTDRPVKLLIVDSLTSHFRSEYIGRGALAERQQKLAKHLA DLHRLANLYDIAVFVTNQVQANGGHILAHSATLRVYLRKGKGGKRIARLIDAPHLPEGEAVFSITEKGIED ; _entity_poly.pdbx_seq_one_letter_code_can ;MATIGRISTGSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAHTLAVMVQLPPEEGGLNGSVIWIDTENTFRPERIREIA QNRGLDPDEVLKHIYVARAFNSNHQMLLVQQAEDKIKELLNTDRPVKLLIVDSLTSHFRSEYIGRGALAERQQKLAKHLA DLHRLANLYDIAVFVTNQVQANGGHILAHSATLRVYLRKGKGGKRIARLIDAPHLPEGEAVFSITEKGIED ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 ALA n 1 3 THR n 1 4 ILE n 1 5 GLY n 1 6 ARG n 1 7 ILE n 1 8 SER n 1 9 THR n 1 10 GLY n 1 11 SER n 1 12 LYS n 1 13 SER n 1 14 LEU n 1 15 ASP n 1 16 LYS n 1 17 LEU n 1 18 LEU n 1 19 GLY n 1 20 GLY n 1 21 GLY n 1 22 ILE n 1 23 GLU n 1 24 THR n 1 25 GLN n 1 26 ALA n 1 27 ILE n 1 28 THR n 1 29 GLU n 1 30 VAL n 1 31 PHE n 1 32 GLY n 1 33 GLU n 1 34 PHE n 1 35 GLY n 1 36 SER n 1 37 GLY n 1 38 LYS n 1 39 THR n 1 40 GLN n 1 41 LEU n 1 42 ALA n 1 43 HIS n 1 44 THR n 1 45 LEU n 1 46 ALA n 1 47 VAL n 1 48 MET n 1 49 VAL n 1 50 GLN n 1 51 LEU n 1 52 PRO n 1 53 PRO n 1 54 GLU n 1 55 GLU n 1 56 GLY n 1 57 GLY n 1 58 LEU n 1 59 ASN n 1 60 GLY n 1 61 SER n 1 62 VAL n 1 63 ILE n 1 64 TRP n 1 65 ILE n 1 66 ASP n 1 67 THR n 1 68 GLU n 1 69 ASN n 1 70 THR n 1 71 PHE n 1 72 ARG n 1 73 PRO n 1 74 GLU n 1 75 ARG n 1 76 ILE n 1 77 ARG n 1 78 GLU n 1 79 ILE n 1 80 ALA n 1 81 GLN n 1 82 ASN n 1 83 ARG n 1 84 GLY n 1 85 LEU n 1 86 ASP n 1 87 PRO n 1 88 ASP n 1 89 GLU n 1 90 VAL n 1 91 LEU n 1 92 LYS n 1 93 HIS n 1 94 ILE n 1 95 TYR n 1 96 VAL n 1 97 ALA n 1 98 ARG n 1 99 ALA n 1 100 PHE n 1 101 ASN n 1 102 SER n 1 103 ASN n 1 104 HIS n 1 105 GLN n 1 106 MET n 1 107 LEU n 1 108 LEU n 1 109 VAL n 1 110 GLN n 1 111 GLN n 1 112 ALA n 1 113 GLU n 1 114 ASP n 1 115 LYS n 1 116 ILE n 1 117 LYS n 1 118 GLU n 1 119 LEU n 1 120 LEU n 1 121 ASN n 1 122 THR n 1 123 ASP n 1 124 ARG n 1 125 PRO n 1 126 VAL n 1 127 LYS n 1 128 LEU n 1 129 LEU n 1 130 ILE n 1 131 VAL n 1 132 ASP n 1 133 SER n 1 134 LEU n 1 135 THR n 1 136 SER n 1 137 HIS n 1 138 PHE n 1 139 ARG n 1 140 SER n 1 141 GLU n 1 142 TYR n 1 143 ILE n 1 144 GLY n 1 145 ARG n 1 146 GLY n 1 147 ALA n 1 148 LEU n 1 149 ALA n 1 150 GLU n 1 151 ARG n 1 152 GLN n 1 153 GLN n 1 154 LYS n 1 155 LEU n 1 156 ALA n 1 157 LYS n 1 158 HIS n 1 159 LEU n 1 160 ALA n 1 161 ASP n 1 162 LEU n 1 163 HIS n 1 164 ARG n 1 165 LEU n 1 166 ALA n 1 167 ASN n 1 168 LEU n 1 169 TYR n 1 170 ASP n 1 171 ILE n 1 172 ALA n 1 173 VAL n 1 174 PHE n 1 175 VAL n 1 176 THR n 1 177 ASN n 1 178 GLN n 1 179 VAL n 1 180 GLN n 1 181 ALA n 1 182 ASN n 1 183 GLY n 1 184 GLY n 1 185 HIS n 1 186 ILE n 1 187 LEU n 1 188 ALA n 1 189 HIS n 1 190 SER n 1 191 ALA n 1 192 THR n 1 193 LEU n 1 194 ARG n 1 195 VAL n 1 196 TYR n 1 197 LEU n 1 198 ARG n 1 199 LYS n 1 200 GLY n 1 201 LYS n 1 202 GLY n 1 203 GLY n 1 204 LYS n 1 205 ARG n 1 206 ILE n 1 207 ALA n 1 208 ARG n 1 209 LEU n 1 210 ILE n 1 211 ASP n 1 212 ALA n 1 213 PRO n 1 214 HIS n 1 215 LEU n 1 216 PRO n 1 217 GLU n 1 218 GLY n 1 219 GLU n 1 220 ALA n 1 221 VAL n 1 222 PHE n 1 223 SER n 1 224 ILE n 1 225 THR n 1 226 GLU n 1 227 LYS n 1 228 GLY n 1 229 ILE n 1 230 GLU n 1 231 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'PYROCOCCUS FURIOSUS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 2261 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PBAT _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RADA_PYRFU _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession O74036 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4B2P _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 231 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O74036 _struct_ref_seq.db_align_beg 108 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 349 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 108 _struct_ref_seq.pdbx_auth_seq_align_end 349 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4B2P MET A 1 ? UNP O74036 ? ? 'expression tag' 107 1 1 4B2P ? A ? ? UNP O74036 ARG 288 deletion ? 2 1 4B2P ? A ? ? UNP O74036 PRO 289 deletion ? 3 1 4B2P ? A ? ? UNP O74036 ASP 290 deletion ? 4 1 4B2P ? A ? ? UNP O74036 ALA 291 deletion ? 5 1 4B2P ? A ? ? UNP O74036 PHE 292 deletion ? 6 1 4B2P ? A ? ? UNP O74036 PHE 293 deletion ? 7 1 4B2P ? A ? ? UNP O74036 GLY 294 deletion ? 8 1 4B2P ? A ? ? UNP O74036 ASP 295 deletion ? 9 1 4B2P ? A ? ? UNP O74036 PRO 296 deletion ? 10 1 4B2P ? A ? ? UNP O74036 THR 297 deletion ? 11 1 4B2P ? A ? ? UNP O74036 ARG 298 deletion ? 12 1 4B2P ? A ? ? UNP O74036 PRO 299 deletion ? 13 1 4B2P ASN A 182 ? UNP O74036 ILE 300 'engineered mutation' 300 14 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 GTP non-polymer n "GUANOSINE-5'-TRIPHOSPHATE" ? 'C10 H16 N5 O14 P3' 523.180 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4B2P _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.14 _exptl_crystal.density_percent_sol 42.42 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.2 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'pH 6.2' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2007-10-05 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.953700 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-1' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-1 _diffrn_source.pdbx_wavelength 0.953700 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4B2P _reflns.observed_criterion_sigma_I 3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 36.59 _reflns.d_resolution_high 1.60 _reflns.number_obs 29390 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.10 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 17.79 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.1 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.60 _reflns_shell.d_res_low 1.70 _reflns_shell.percent_possible_all 98.3 _reflns_shell.Rmerge_I_obs 0.82 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 3.06 _reflns_shell.pdbx_redundancy 7.0 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4B2P _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 27899 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 36.59 _refine.ls_d_res_high 1.60 _refine.ls_percent_reflns_obs 99.67 _refine.ls_R_factor_obs 0.18068 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17860 _refine.ls_R_factor_R_free 0.21976 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1490 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.956 _refine.correlation_coeff_Fo_to_Fc_free 0.934 _refine.B_iso_mean 15.960 _refine.aniso_B[1][1] 0.08 _refine.aniso_B[2][2] 0.26 _refine.aniso_B[3][3] -0.34 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 1PZN CHAIN A' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.087 _refine.pdbx_overall_ESU_R_Free 0.092 _refine.overall_SU_ML 0.054 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.529 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1646 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 117 _refine_hist.number_atoms_total 1808 _refine_hist.d_res_high 1.60 _refine_hist.d_res_low 36.59 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.026 0.022 ? 1724 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 2.153 1.993 ? 2336 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.569 5.000 ? 217 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.606 23.919 ? 74 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.019 15.000 ? 294 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 14.682 15.000 ? 13 'X-RAY DIFFRACTION' ? r_chiral_restr 0.178 0.200 ? 271 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.011 0.020 ? 1262 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 1.418 1.500 ? 1068 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 2.418 2.000 ? 1705 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 3.936 3.000 ? 656 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 6.287 4.500 ? 629 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.602 _refine_ls_shell.d_res_low 1.643 _refine_ls_shell.number_reflns_R_work 1969 _refine_ls_shell.R_factor_R_work 0.273 _refine_ls_shell.percent_reflns_obs 96.26 _refine_ls_shell.R_factor_R_free 0.314 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 88 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 4B2P _struct.title 'RadA C-terminal ATPase domain from Pyrococcus furiosus bound to GTP' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4B2P _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 11 ? GLY A 19 ? SER A 117 GLY A 125 1 ? 9 HELX_P HELX_P2 2 GLY A 37 ? VAL A 49 ? GLY A 143 VAL A 155 1 ? 13 HELX_P HELX_P3 3 PRO A 52 ? GLY A 56 ? PRO A 158 GLY A 162 5 ? 5 HELX_P HELX_P4 4 ARG A 72 ? ARG A 83 ? ARG A 178 ARG A 189 1 ? 12 HELX_P HELX_P5 5 ASP A 86 ? HIS A 93 ? ASP A 192 HIS A 199 1 ? 8 HELX_P HELX_P6 6 ASN A 101 ? LEU A 120 ? ASN A 207 LEU A 226 1 ? 20 HELX_P HELX_P7 7 THR A 135 ? TYR A 142 ? THR A 241 TYR A 248 1 ? 8 HELX_P HELX_P8 8 GLY A 146 ? ALA A 156 ? GLY A 252 ALA A 262 1 ? 11 HELX_P HELX_P9 9 HIS A 158 ? ASP A 170 ? HIS A 264 ASP A 276 1 ? 13 HELX_P HELX_P10 10 LYS A 201 ? GLY A 203 ? LYS A 319 GLY A 321 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A THR 39 OG1 ? ? ? 1_555 C MG . MG ? ? A THR 145 A MG 1351 1_555 ? ? ? ? ? ? ? 2.121 ? ? metalc2 metalc ? ? B GTP . O2B ? ? ? 1_555 C MG . MG ? ? A GTP 1350 A MG 1351 1_555 ? ? ? ? ? ? ? 2.071 ? ? metalc3 metalc ? ? B GTP . O3G ? ? ? 1_555 C MG . MG ? ? A GTP 1350 A MG 1351 1_555 ? ? ? ? ? ? ? 2.022 ? ? metalc4 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 1351 A HOH 2023 1_555 ? ? ? ? ? ? ? 2.128 ? ? metalc5 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 1351 A HOH 2024 1_555 ? ? ? ? ? ? ? 2.157 ? ? metalc6 metalc ? ? C MG . MG ? ? ? 1_555 F HOH . O ? ? A MG 1351 A HOH 2025 1_555 ? ? ? ? ? ? ? 2.096 ? ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASP _struct_mon_prot_cis.label_seq_id 132 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASP _struct_mon_prot_cis.auth_seq_id 238 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 133 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 239 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 8.83 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 2 ? AB ? 9 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AB 1 2 ? parallel AB 2 3 ? parallel AB 3 4 ? parallel AB 4 5 ? parallel AB 5 6 ? parallel AB 6 7 ? anti-parallel AB 7 8 ? anti-parallel AB 8 9 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 ARG A 6 ? ILE A 7 ? ARG A 112 ILE A 113 AA 2 ILE A 22 ? GLU A 23 ? ILE A 128 GLU A 129 AB 1 ILE A 94 ? ARG A 98 ? ILE A 200 ARG A 204 AB 2 SER A 61 ? ASP A 66 ? SER A 167 ASP A 172 AB 3 VAL A 126 ? ASP A 132 ? VAL A 232 ASP A 238 AB 4 ALA A 172 ? GLN A 178 ? ALA A 278 GLN A 284 AB 5 ALA A 26 ? GLY A 32 ? ALA A 132 GLY A 138 AB 6 LEU A 193 ? LYS A 199 ? LEU A 311 LYS A 317 AB 7 ARG A 205 ? ILE A 210 ? ARG A 323 ILE A 328 AB 8 ALA A 220 ? THR A 225 ? ALA A 338 THR A 343 AB 9 GLY A 228 ? GLU A 230 ? GLY A 346 GLU A 348 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N ILE A 7 ? N ILE A 113 O ILE A 22 ? O ILE A 128 AB 1 2 N TYR A 95 ? N TYR A 201 O VAL A 62 ? O VAL A 168 AB 2 3 O SER A 61 ? O SER A 167 N LYS A 127 ? N LYS A 233 AB 3 4 N LEU A 129 ? N LEU A 235 O ALA A 172 ? O ALA A 278 AB 4 5 N VAL A 173 ? N VAL A 279 O ALA A 26 ? O ALA A 132 AB 5 6 N GLU A 29 ? N GLU A 135 O LEU A 193 ? O LEU A 311 AB 6 7 N ARG A 198 ? N ARG A 316 O ILE A 206 ? O ILE A 324 AB 7 8 N ALA A 207 ? N ALA A 325 O ALA A 220 ? O ALA A 338 AB 8 9 N THR A 225 ? N THR A 343 O GLY A 228 ? O GLY A 346 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A GTP 1350 ? 22 'BINDING SITE FOR RESIDUE GTP A 1350' AC2 Software A MG 1351 ? 5 'BINDING SITE FOR RESIDUE MG A 1351' AC3 Software A GOL 1352 ? 4 'BINDING SITE FOR RESIDUE GOL A 1352' AC4 Software A GOL 1353 ? 7 'BINDING SITE FOR RESIDUE GOL A 1353' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 22 PHE A 34 ? PHE A 140 . ? 1_555 ? 2 AC1 22 GLY A 35 ? GLY A 141 . ? 1_555 ? 3 AC1 22 SER A 36 ? SER A 142 . ? 1_555 ? 4 AC1 22 GLY A 37 ? GLY A 143 . ? 1_555 ? 5 AC1 22 LYS A 38 ? LYS A 144 . ? 1_555 ? 6 AC1 22 THR A 39 ? THR A 145 . ? 1_555 ? 7 AC1 22 GLN A 40 ? GLN A 146 . ? 1_555 ? 8 AC1 22 ARG A 75 ? ARG A 181 . ? 1_555 ? 9 AC1 22 GLN A 178 ? GLN A 284 . ? 1_555 ? 10 AC1 22 ARG A 205 ? ARG A 323 . ? 1_555 ? 11 AC1 22 ILE A 224 ? ILE A 342 . ? 1_555 ? 12 AC1 22 MG C . ? MG A 1351 . ? 1_555 ? 13 AC1 22 GOL E . ? GOL A 1353 . ? 1_555 ? 14 AC1 22 HOH F . ? HOH A 2022 . ? 1_555 ? 15 AC1 22 HOH F . ? HOH A 2023 . ? 1_555 ? 16 AC1 22 HOH F . ? HOH A 2024 . ? 1_555 ? 17 AC1 22 HOH F . ? HOH A 2025 . ? 1_555 ? 18 AC1 22 HOH F . ? HOH A 2044 . ? 1_555 ? 19 AC1 22 HOH F . ? HOH A 2053 . ? 1_555 ? 20 AC1 22 HOH F . ? HOH A 2054 . ? 1_555 ? 21 AC1 22 HOH F . ? HOH A 2108 . ? 1_555 ? 22 AC1 22 HOH F . ? HOH A 2117 . ? 1_555 ? 23 AC2 5 THR A 39 ? THR A 145 . ? 1_555 ? 24 AC2 5 GTP B . ? GTP A 1350 . ? 1_555 ? 25 AC2 5 HOH F . ? HOH A 2023 . ? 1_555 ? 26 AC2 5 HOH F . ? HOH A 2024 . ? 1_555 ? 27 AC2 5 HOH F . ? HOH A 2025 . ? 1_555 ? 28 AC3 4 ILE A 63 ? ILE A 169 . ? 1_555 ? 29 AC3 4 LEU A 108 ? LEU A 214 . ? 1_555 ? 30 AC3 4 ALA A 112 ? ALA A 218 . ? 1_555 ? 31 AC3 4 HOH F . ? HOH A 2073 . ? 1_555 ? 32 AC4 7 THR A 39 ? THR A 145 . ? 1_555 ? 33 AC4 7 GLN A 40 ? GLN A 146 . ? 1_555 ? 34 AC4 7 HIS A 43 ? HIS A 149 . ? 1_555 ? 35 AC4 7 THR A 70 ? THR A 176 . ? 1_555 ? 36 AC4 7 ARG A 72 ? ARG A 178 . ? 1_555 ? 37 AC4 7 GTP B . ? GTP A 1350 . ? 1_555 ? 38 AC4 7 HOH F . ? HOH A 2026 . ? 1_555 ? # _database_PDB_matrix.entry_id 4B2P _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4B2P _atom_sites.fract_transf_matrix[1][1] 0.024802 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016124 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011472 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C MG N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 107 ? ? ? A . n A 1 2 ALA 2 108 ? ? ? A . n A 1 3 THR 3 109 109 THR THR A . n A 1 4 ILE 4 110 110 ILE ILE A . n A 1 5 GLY 5 111 111 GLY GLY A . n A 1 6 ARG 6 112 112 ARG ARG A . n A 1 7 ILE 7 113 113 ILE ILE A . n A 1 8 SER 8 114 114 SER SER A . n A 1 9 THR 9 115 115 THR THR A . n A 1 10 GLY 10 116 116 GLY GLY A . n A 1 11 SER 11 117 117 SER SER A . n A 1 12 LYS 12 118 118 LYS LYS A . n A 1 13 SER 13 119 119 SER SER A . n A 1 14 LEU 14 120 120 LEU LEU A . n A 1 15 ASP 15 121 121 ASP ASP A . n A 1 16 LYS 16 122 122 LYS LYS A . n A 1 17 LEU 17 123 123 LEU LEU A . n A 1 18 LEU 18 124 124 LEU LEU A . n A 1 19 GLY 19 125 125 GLY GLY A . n A 1 20 GLY 20 126 126 GLY GLY A . n A 1 21 GLY 21 127 127 GLY GLY A . n A 1 22 ILE 22 128 128 ILE ILE A . n A 1 23 GLU 23 129 129 GLU GLU A . n A 1 24 THR 24 130 130 THR THR A . n A 1 25 GLN 25 131 131 GLN GLN A . n A 1 26 ALA 26 132 132 ALA ALA A . n A 1 27 ILE 27 133 133 ILE ILE A . n A 1 28 THR 28 134 134 THR THR A . n A 1 29 GLU 29 135 135 GLU GLU A . n A 1 30 VAL 30 136 136 VAL VAL A . n A 1 31 PHE 31 137 137 PHE PHE A . n A 1 32 GLY 32 138 138 GLY GLY A . n A 1 33 GLU 33 139 139 GLU GLU A . n A 1 34 PHE 34 140 140 PHE PHE A . n A 1 35 GLY 35 141 141 GLY GLY A . n A 1 36 SER 36 142 142 SER SER A . n A 1 37 GLY 37 143 143 GLY GLY A . n A 1 38 LYS 38 144 144 LYS LYS A . n A 1 39 THR 39 145 145 THR THR A . n A 1 40 GLN 40 146 146 GLN GLN A . n A 1 41 LEU 41 147 147 LEU LEU A . n A 1 42 ALA 42 148 148 ALA ALA A . n A 1 43 HIS 43 149 149 HIS HIS A . n A 1 44 THR 44 150 150 THR THR A . n A 1 45 LEU 45 151 151 LEU LEU A . n A 1 46 ALA 46 152 152 ALA ALA A . n A 1 47 VAL 47 153 153 VAL VAL A . n A 1 48 MET 48 154 154 MET MET A . n A 1 49 VAL 49 155 155 VAL VAL A . n A 1 50 GLN 50 156 156 GLN GLN A . n A 1 51 LEU 51 157 157 LEU LEU A . n A 1 52 PRO 52 158 158 PRO PRO A . n A 1 53 PRO 53 159 159 PRO PRO A . n A 1 54 GLU 54 160 160 GLU GLU A . n A 1 55 GLU 55 161 161 GLU GLU A . n A 1 56 GLY 56 162 162 GLY GLY A . n A 1 57 GLY 57 163 163 GLY GLY A . n A 1 58 LEU 58 164 164 LEU LEU A . n A 1 59 ASN 59 165 165 ASN ASN A . n A 1 60 GLY 60 166 166 GLY GLY A . n A 1 61 SER 61 167 167 SER SER A . n A 1 62 VAL 62 168 168 VAL VAL A . n A 1 63 ILE 63 169 169 ILE ILE A . n A 1 64 TRP 64 170 170 TRP TRP A . n A 1 65 ILE 65 171 171 ILE ILE A . n A 1 66 ASP 66 172 172 ASP ASP A . n A 1 67 THR 67 173 173 THR THR A . n A 1 68 GLU 68 174 174 GLU GLU A . n A 1 69 ASN 69 175 175 ASN ASN A . n A 1 70 THR 70 176 176 THR THR A . n A 1 71 PHE 71 177 177 PHE PHE A . n A 1 72 ARG 72 178 178 ARG ARG A . n A 1 73 PRO 73 179 179 PRO PRO A . n A 1 74 GLU 74 180 180 GLU GLU A . n A 1 75 ARG 75 181 181 ARG ARG A . n A 1 76 ILE 76 182 182 ILE ILE A . n A 1 77 ARG 77 183 183 ARG ARG A . n A 1 78 GLU 78 184 184 GLU GLU A . n A 1 79 ILE 79 185 185 ILE ILE A . n A 1 80 ALA 80 186 186 ALA ALA A . n A 1 81 GLN 81 187 187 GLN GLN A . n A 1 82 ASN 82 188 188 ASN ASN A . n A 1 83 ARG 83 189 189 ARG ARG A . n A 1 84 GLY 84 190 190 GLY GLY A . n A 1 85 LEU 85 191 191 LEU LEU A . n A 1 86 ASP 86 192 192 ASP ASP A . n A 1 87 PRO 87 193 193 PRO PRO A . n A 1 88 ASP 88 194 194 ASP ASP A . n A 1 89 GLU 89 195 195 GLU GLU A . n A 1 90 VAL 90 196 196 VAL VAL A . n A 1 91 LEU 91 197 197 LEU LEU A . n A 1 92 LYS 92 198 198 LYS LYS A . n A 1 93 HIS 93 199 199 HIS HIS A . n A 1 94 ILE 94 200 200 ILE ILE A . n A 1 95 TYR 95 201 201 TYR TYR A . n A 1 96 VAL 96 202 202 VAL VAL A . n A 1 97 ALA 97 203 203 ALA ALA A . n A 1 98 ARG 98 204 204 ARG ARG A . n A 1 99 ALA 99 205 205 ALA ALA A . n A 1 100 PHE 100 206 206 PHE PHE A . n A 1 101 ASN 101 207 207 ASN ASN A . n A 1 102 SER 102 208 208 SER SER A . n A 1 103 ASN 103 209 209 ASN ASN A . n A 1 104 HIS 104 210 210 HIS HIS A . n A 1 105 GLN 105 211 211 GLN GLN A . n A 1 106 MET 106 212 212 MET MET A . n A 1 107 LEU 107 213 213 LEU LEU A . n A 1 108 LEU 108 214 214 LEU LEU A . n A 1 109 VAL 109 215 215 VAL VAL A . n A 1 110 GLN 110 216 216 GLN GLN A . n A 1 111 GLN 111 217 217 GLN GLN A . n A 1 112 ALA 112 218 218 ALA ALA A . n A 1 113 GLU 113 219 219 GLU GLU A . n A 1 114 ASP 114 220 220 ASP ASP A . n A 1 115 LYS 115 221 221 LYS LYS A . n A 1 116 ILE 116 222 222 ILE ILE A . n A 1 117 LYS 117 223 223 LYS LYS A . n A 1 118 GLU 118 224 224 GLU GLU A . n A 1 119 LEU 119 225 225 LEU LEU A . n A 1 120 LEU 120 226 226 LEU LEU A . n A 1 121 ASN 121 227 227 ASN ASN A . n A 1 122 THR 122 228 228 THR THR A . n A 1 123 ASP 123 229 229 ASP ASP A . n A 1 124 ARG 124 230 230 ARG ARG A . n A 1 125 PRO 125 231 231 PRO PRO A . n A 1 126 VAL 126 232 232 VAL VAL A . n A 1 127 LYS 127 233 233 LYS LYS A . n A 1 128 LEU 128 234 234 LEU LEU A . n A 1 129 LEU 129 235 235 LEU LEU A . n A 1 130 ILE 130 236 236 ILE ILE A . n A 1 131 VAL 131 237 237 VAL VAL A . n A 1 132 ASP 132 238 238 ASP ASP A . n A 1 133 SER 133 239 239 SER SER A . n A 1 134 LEU 134 240 240 LEU LEU A . n A 1 135 THR 135 241 241 THR THR A . n A 1 136 SER 136 242 242 SER SER A . n A 1 137 HIS 137 243 243 HIS HIS A . n A 1 138 PHE 138 244 244 PHE PHE A . n A 1 139 ARG 139 245 245 ARG ARG A . n A 1 140 SER 140 246 246 SER SER A . n A 1 141 GLU 141 247 247 GLU GLU A . n A 1 142 TYR 142 248 248 TYR TYR A . n A 1 143 ILE 143 249 249 ILE ILE A . n A 1 144 GLY 144 250 250 GLY GLY A . n A 1 145 ARG 145 251 251 ARG ARG A . n A 1 146 GLY 146 252 252 GLY GLY A . n A 1 147 ALA 147 253 253 ALA ALA A . n A 1 148 LEU 148 254 254 LEU LEU A . n A 1 149 ALA 149 255 255 ALA ALA A . n A 1 150 GLU 150 256 256 GLU GLU A . n A 1 151 ARG 151 257 257 ARG ARG A . n A 1 152 GLN 152 258 258 GLN GLN A . n A 1 153 GLN 153 259 259 GLN GLN A . n A 1 154 LYS 154 260 260 LYS LYS A . n A 1 155 LEU 155 261 261 LEU LEU A . n A 1 156 ALA 156 262 262 ALA ALA A . n A 1 157 LYS 157 263 263 LYS LYS A . n A 1 158 HIS 158 264 264 HIS HIS A . n A 1 159 LEU 159 265 265 LEU LEU A . n A 1 160 ALA 160 266 266 ALA ALA A . n A 1 161 ASP 161 267 267 ASP ASP A . n A 1 162 LEU 162 268 268 LEU LEU A . n A 1 163 HIS 163 269 269 HIS HIS A . n A 1 164 ARG 164 270 270 ARG ARG A . n A 1 165 LEU 165 271 271 LEU LEU A . n A 1 166 ALA 166 272 272 ALA ALA A . n A 1 167 ASN 167 273 273 ASN ASN A . n A 1 168 LEU 168 274 274 LEU LEU A . n A 1 169 TYR 169 275 275 TYR TYR A . n A 1 170 ASP 170 276 276 ASP ASP A . n A 1 171 ILE 171 277 277 ILE ILE A . n A 1 172 ALA 172 278 278 ALA ALA A . n A 1 173 VAL 173 279 279 VAL VAL A . n A 1 174 PHE 174 280 280 PHE PHE A . n A 1 175 VAL 175 281 281 VAL VAL A . n A 1 176 THR 176 282 282 THR THR A . n A 1 177 ASN 177 283 283 ASN ASN A . n A 1 178 GLN 178 284 284 GLN GLN A . n A 1 179 VAL 179 285 285 VAL VAL A . n A 1 180 GLN 180 286 ? ? ? A . n A 1 181 ALA 181 287 ? ? ? A . n A 1 182 ASN 182 300 ? ? ? A . n A 1 183 GLY 183 301 ? ? ? A . n A 1 184 GLY 184 302 ? ? ? A . n A 1 185 HIS 185 303 ? ? ? A . n A 1 186 ILE 186 304 304 ILE ILE A . n A 1 187 LEU 187 305 305 LEU LEU A . n A 1 188 ALA 188 306 306 ALA ALA A . n A 1 189 HIS 189 307 307 HIS HIS A . n A 1 190 SER 190 308 308 SER SER A . n A 1 191 ALA 191 309 309 ALA ALA A . n A 1 192 THR 192 310 310 THR THR A . n A 1 193 LEU 193 311 311 LEU LEU A . n A 1 194 ARG 194 312 312 ARG ARG A . n A 1 195 VAL 195 313 313 VAL VAL A . n A 1 196 TYR 196 314 314 TYR TYR A . n A 1 197 LEU 197 315 315 LEU LEU A . n A 1 198 ARG 198 316 316 ARG ARG A . n A 1 199 LYS 199 317 317 LYS LYS A . n A 1 200 GLY 200 318 318 GLY GLY A . n A 1 201 LYS 201 319 319 LYS LYS A . n A 1 202 GLY 202 320 320 GLY GLY A . n A 1 203 GLY 203 321 321 GLY GLY A . n A 1 204 LYS 204 322 322 LYS LYS A . n A 1 205 ARG 205 323 323 ARG ARG A . n A 1 206 ILE 206 324 324 ILE ILE A . n A 1 207 ALA 207 325 325 ALA ALA A . n A 1 208 ARG 208 326 326 ARG ARG A . n A 1 209 LEU 209 327 327 LEU LEU A . n A 1 210 ILE 210 328 328 ILE ILE A . n A 1 211 ASP 211 329 ? ? ? A . n A 1 212 ALA 212 330 ? ? ? A . n A 1 213 PRO 213 331 ? ? ? A . n A 1 214 HIS 214 332 ? ? ? A . n A 1 215 LEU 215 333 ? ? ? A . n A 1 216 PRO 216 334 ? ? ? A . n A 1 217 GLU 217 335 ? ? ? A . n A 1 218 GLY 218 336 336 GLY GLY A . n A 1 219 GLU 219 337 337 GLU GLU A . n A 1 220 ALA 220 338 338 ALA ALA A . n A 1 221 VAL 221 339 339 VAL VAL A . n A 1 222 PHE 222 340 340 PHE PHE A . n A 1 223 SER 223 341 341 SER SER A . n A 1 224 ILE 224 342 342 ILE ILE A . n A 1 225 THR 225 343 343 THR THR A . n A 1 226 GLU 226 344 344 GLU GLU A . n A 1 227 LYS 227 345 345 LYS LYS A . n A 1 228 GLY 228 346 346 GLY GLY A . n A 1 229 ILE 229 347 347 ILE ILE A . n A 1 230 GLU 230 348 348 GLU GLU A . n A 1 231 ASP 231 349 349 ASP ASP A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GTP 1 1350 1350 GTP GTP A . C 3 MG 1 1351 1351 MG MG A . D 4 GOL 1 1352 1352 GOL GOL A . E 4 GOL 1 1353 1353 GOL GOL A . F 5 HOH 1 2001 2001 HOH HOH A . F 5 HOH 2 2002 2002 HOH HOH A . F 5 HOH 3 2003 2003 HOH HOH A . F 5 HOH 4 2004 2004 HOH HOH A . F 5 HOH 5 2005 2005 HOH HOH A . F 5 HOH 6 2006 2006 HOH HOH A . F 5 HOH 7 2007 2007 HOH HOH A . F 5 HOH 8 2008 2008 HOH HOH A . F 5 HOH 9 2009 2009 HOH HOH A . F 5 HOH 10 2010 2010 HOH HOH A . F 5 HOH 11 2011 2011 HOH HOH A . F 5 HOH 12 2012 2012 HOH HOH A . F 5 HOH 13 2013 2013 HOH HOH A . F 5 HOH 14 2014 2014 HOH HOH A . F 5 HOH 15 2015 2015 HOH HOH A . F 5 HOH 16 2016 2016 HOH HOH A . F 5 HOH 17 2017 2017 HOH HOH A . F 5 HOH 18 2018 2018 HOH HOH A . F 5 HOH 19 2019 2019 HOH HOH A . F 5 HOH 20 2020 2020 HOH HOH A . F 5 HOH 21 2021 2021 HOH HOH A . F 5 HOH 22 2022 2022 HOH HOH A . F 5 HOH 23 2023 2023 HOH HOH A . F 5 HOH 24 2024 2024 HOH HOH A . F 5 HOH 25 2025 2025 HOH HOH A . F 5 HOH 26 2026 2026 HOH HOH A . F 5 HOH 27 2027 2027 HOH HOH A . F 5 HOH 28 2028 2028 HOH HOH A . F 5 HOH 29 2029 2029 HOH HOH A . F 5 HOH 30 2030 2030 HOH HOH A . F 5 HOH 31 2031 2031 HOH HOH A . F 5 HOH 32 2032 2032 HOH HOH A . F 5 HOH 33 2033 2033 HOH HOH A . F 5 HOH 34 2034 2034 HOH HOH A . F 5 HOH 35 2035 2035 HOH HOH A . F 5 HOH 36 2036 2036 HOH HOH A . F 5 HOH 37 2037 2037 HOH HOH A . F 5 HOH 38 2038 2038 HOH HOH A . F 5 HOH 39 2039 2039 HOH HOH A . F 5 HOH 40 2040 2040 HOH HOH A . F 5 HOH 41 2041 2041 HOH HOH A . F 5 HOH 42 2042 2042 HOH HOH A . F 5 HOH 43 2043 2043 HOH HOH A . F 5 HOH 44 2044 2044 HOH HOH A . F 5 HOH 45 2045 2045 HOH HOH A . F 5 HOH 46 2046 2046 HOH HOH A . F 5 HOH 47 2047 2047 HOH HOH A . F 5 HOH 48 2048 2048 HOH HOH A . F 5 HOH 49 2049 2049 HOH HOH A . F 5 HOH 50 2050 2050 HOH HOH A . F 5 HOH 51 2051 2051 HOH HOH A . F 5 HOH 52 2052 2052 HOH HOH A . F 5 HOH 53 2053 2053 HOH HOH A . F 5 HOH 54 2054 2054 HOH HOH A . F 5 HOH 55 2055 2055 HOH HOH A . F 5 HOH 56 2056 2056 HOH HOH A . F 5 HOH 57 2057 2057 HOH HOH A . F 5 HOH 58 2058 2058 HOH HOH A . F 5 HOH 59 2059 2059 HOH HOH A . F 5 HOH 60 2060 2060 HOH HOH A . F 5 HOH 61 2061 2061 HOH HOH A . F 5 HOH 62 2062 2062 HOH HOH A . F 5 HOH 63 2063 2063 HOH HOH A . F 5 HOH 64 2064 2064 HOH HOH A . F 5 HOH 65 2065 2065 HOH HOH A . F 5 HOH 66 2066 2066 HOH HOH A . F 5 HOH 67 2067 2067 HOH HOH A . F 5 HOH 68 2068 2068 HOH HOH A . F 5 HOH 69 2069 2069 HOH HOH A . F 5 HOH 70 2070 2070 HOH HOH A . F 5 HOH 71 2071 2071 HOH HOH A . F 5 HOH 72 2072 2072 HOH HOH A . F 5 HOH 73 2073 2073 HOH HOH A . F 5 HOH 74 2074 2074 HOH HOH A . F 5 HOH 75 2075 2075 HOH HOH A . F 5 HOH 76 2076 2076 HOH HOH A . F 5 HOH 77 2077 2077 HOH HOH A . F 5 HOH 78 2078 2078 HOH HOH A . F 5 HOH 79 2079 2079 HOH HOH A . F 5 HOH 80 2080 2080 HOH HOH A . F 5 HOH 81 2081 2081 HOH HOH A . F 5 HOH 82 2082 2082 HOH HOH A . F 5 HOH 83 2083 2083 HOH HOH A . F 5 HOH 84 2084 2084 HOH HOH A . F 5 HOH 85 2085 2085 HOH HOH A . F 5 HOH 86 2086 2086 HOH HOH A . F 5 HOH 87 2087 2087 HOH HOH A . F 5 HOH 88 2088 2088 HOH HOH A . F 5 HOH 89 2089 2089 HOH HOH A . F 5 HOH 90 2090 2090 HOH HOH A . F 5 HOH 91 2091 2091 HOH HOH A . F 5 HOH 92 2092 2092 HOH HOH A . F 5 HOH 93 2093 2093 HOH HOH A . F 5 HOH 94 2094 2094 HOH HOH A . F 5 HOH 95 2095 2095 HOH HOH A . F 5 HOH 96 2096 2096 HOH HOH A . F 5 HOH 97 2097 2097 HOH HOH A . F 5 HOH 98 2098 2098 HOH HOH A . F 5 HOH 99 2099 2099 HOH HOH A . F 5 HOH 100 2100 2100 HOH HOH A . F 5 HOH 101 2101 2101 HOH HOH A . F 5 HOH 102 2102 2102 HOH HOH A . F 5 HOH 103 2103 2103 HOH HOH A . F 5 HOH 104 2104 2104 HOH HOH A . F 5 HOH 105 2105 2105 HOH HOH A . F 5 HOH 106 2106 2106 HOH HOH A . F 5 HOH 107 2107 2107 HOH HOH A . F 5 HOH 108 2108 2108 HOH HOH A . F 5 HOH 109 2109 2109 HOH HOH A . F 5 HOH 110 2110 2110 HOH HOH A . F 5 HOH 111 2111 2111 HOH HOH A . F 5 HOH 112 2112 2112 HOH HOH A . F 5 HOH 113 2113 2113 HOH HOH A . F 5 HOH 114 2114 2114 HOH HOH A . F 5 HOH 115 2115 2115 HOH HOH A . F 5 HOH 116 2116 2116 HOH HOH A . F 5 HOH 117 2117 2117 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OG1 ? A THR 39 ? A THR 145 ? 1_555 MG ? C MG . ? A MG 1351 ? 1_555 O2B ? B GTP . ? A GTP 1350 ? 1_555 90.0 ? 2 OG1 ? A THR 39 ? A THR 145 ? 1_555 MG ? C MG . ? A MG 1351 ? 1_555 O3G ? B GTP . ? A GTP 1350 ? 1_555 178.4 ? 3 O2B ? B GTP . ? A GTP 1350 ? 1_555 MG ? C MG . ? A MG 1351 ? 1_555 O3G ? B GTP . ? A GTP 1350 ? 1_555 90.3 ? 4 OG1 ? A THR 39 ? A THR 145 ? 1_555 MG ? C MG . ? A MG 1351 ? 1_555 O ? F HOH . ? A HOH 2023 ? 1_555 88.5 ? 5 O2B ? B GTP . ? A GTP 1350 ? 1_555 MG ? C MG . ? A MG 1351 ? 1_555 O ? F HOH . ? A HOH 2023 ? 1_555 89.9 ? 6 O3G ? B GTP . ? A GTP 1350 ? 1_555 MG ? C MG . ? A MG 1351 ? 1_555 O ? F HOH . ? A HOH 2023 ? 1_555 90.0 ? 7 OG1 ? A THR 39 ? A THR 145 ? 1_555 MG ? C MG . ? A MG 1351 ? 1_555 O ? F HOH . ? A HOH 2024 ? 1_555 89.6 ? 8 O2B ? B GTP . ? A GTP 1350 ? 1_555 MG ? C MG . ? A MG 1351 ? 1_555 O ? F HOH . ? A HOH 2024 ? 1_555 177.2 ? 9 O3G ? B GTP . ? A GTP 1350 ? 1_555 MG ? C MG . ? A MG 1351 ? 1_555 O ? F HOH . ? A HOH 2024 ? 1_555 90.0 ? 10 O ? F HOH . ? A HOH 2023 ? 1_555 MG ? C MG . ? A MG 1351 ? 1_555 O ? F HOH . ? A HOH 2024 ? 1_555 87.3 ? 11 OG1 ? A THR 39 ? A THR 145 ? 1_555 MG ? C MG . ? A MG 1351 ? 1_555 O ? F HOH . ? A HOH 2025 ? 1_555 86.8 ? 12 O2B ? B GTP . ? A GTP 1350 ? 1_555 MG ? C MG . ? A MG 1351 ? 1_555 O ? F HOH . ? A HOH 2025 ? 1_555 94.8 ? 13 O3G ? B GTP . ? A GTP 1350 ? 1_555 MG ? C MG . ? A MG 1351 ? 1_555 O ? F HOH . ? A HOH 2025 ? 1_555 94.7 ? 14 O ? F HOH . ? A HOH 2023 ? 1_555 MG ? C MG . ? A MG 1351 ? 1_555 O ? F HOH . ? A HOH 2025 ? 1_555 173.3 ? 15 O ? F HOH . ? A HOH 2024 ? 1_555 MG ? C MG . ? A MG 1351 ? 1_555 O ? F HOH . ? A HOH 2025 ? 1_555 88.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-07-24 2 'Structure model' 1 1 2016-07-20 3 'Structure model' 1 2 2016-07-27 4 'Structure model' 1 3 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 4 'Structure model' Other 7 4 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' chem_comp_atom 2 4 'Structure model' chem_comp_bond 3 4 'Structure model' database_2 4 4 'Structure model' pdbx_database_status 5 4 'Structure model' pdbx_initial_refinement_model 6 4 'Structure model' pdbx_struct_conn_angle 7 4 'Structure model' struct_conn 8 4 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_database_status.status_code_sf' 4 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 5 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 6 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 7 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 8 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 9 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 10 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 11 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 12 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 13 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_atom_id' 14 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 15 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 16 4 'Structure model' '_pdbx_struct_conn_angle.value' 17 4 'Structure model' '_struct_conn.pdbx_dist_value' 18 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 19 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 20 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 21 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 22 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 23 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 24 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 25 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 26 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 27 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 28 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 29 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 30 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 31 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 32 4 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.5.0109 ? 1 XDS 'data reduction' . ? 2 XDS 'data scaling' . ? 3 AMoRE phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NH1 A ARG 251 ? ? O A HOH 2086 ? ? 2.00 2 1 OE2 A GLU 344 ? ? O A HOH 2112 ? ? 2.16 3 1 O A HOH 2107 ? ? O A HOH 2111 ? ? 2.19 4 1 O A HOH 2052 ? ? O A HOH 2058 ? ? 2.19 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CE2 _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 TYR _pdbx_validate_rmsd_bond.auth_seq_id_1 248 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CD2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 TYR _pdbx_validate_rmsd_bond.auth_seq_id_2 248 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.488 _pdbx_validate_rmsd_bond.bond_target_value 1.389 _pdbx_validate_rmsd_bond.bond_deviation 0.099 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.015 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CA A LEU 226 ? ? CB A LEU 226 ? ? CG A LEU 226 ? ? 131.47 115.30 16.17 2.30 N 2 1 NE A ARG 230 ? ? CZ A ARG 230 ? ? NH1 A ARG 230 ? ? 124.06 120.30 3.76 0.50 N 3 1 NE A ARG 230 ? ? CZ A ARG 230 ? ? NH2 A ARG 230 ? ? 117.16 120.30 -3.14 0.50 N 4 1 NE A ARG 316 ? ? CZ A ARG 316 ? ? NH1 A ARG 316 ? ? 123.94 120.30 3.64 0.50 N # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A GLN 187 ? CG ? A GLN 81 CG 2 1 Y 1 A GLN 187 ? CD ? A GLN 81 CD 3 1 Y 1 A GLN 187 ? OE1 ? A GLN 81 OE1 4 1 Y 1 A GLN 187 ? NE2 ? A GLN 81 NE2 5 1 Y 1 A ARG 204 ? CG ? A ARG 98 CG 6 1 Y 1 A ARG 204 ? CD ? A ARG 98 CD 7 1 Y 1 A ARG 204 ? NE ? A ARG 98 NE 8 1 Y 1 A ARG 204 ? CZ ? A ARG 98 CZ 9 1 Y 1 A ARG 204 ? NH1 ? A ARG 98 NH1 10 1 Y 1 A ARG 204 ? NH2 ? A ARG 98 NH2 11 1 Y 1 A ASN 227 ? CG ? A ASN 121 CG 12 1 Y 1 A ASN 227 ? OD1 ? A ASN 121 OD1 13 1 Y 1 A ASN 227 ? ND2 ? A ASN 121 ND2 14 1 Y 1 A ARG 245 ? CG ? A ARG 139 CG 15 1 Y 1 A ARG 245 ? CD ? A ARG 139 CD 16 1 Y 1 A ARG 245 ? NE ? A ARG 139 NE 17 1 Y 1 A ARG 245 ? CZ ? A ARG 139 CZ 18 1 Y 1 A ARG 245 ? NH1 ? A ARG 139 NH1 19 1 Y 1 A ARG 245 ? NH2 ? A ARG 139 NH2 20 1 Y 1 A GLN 259 ? CG ? A GLN 153 CG 21 1 Y 1 A GLN 259 ? CD ? A GLN 153 CD 22 1 Y 1 A GLN 259 ? OE1 ? A GLN 153 OE1 23 1 Y 1 A GLN 259 ? NE2 ? A GLN 153 NE2 24 1 Y 1 A LYS 260 ? CG ? A LYS 154 CG 25 1 Y 1 A LYS 260 ? CD ? A LYS 154 CD 26 1 Y 1 A LYS 260 ? CE ? A LYS 154 CE 27 1 Y 1 A LYS 260 ? NZ ? A LYS 154 NZ 28 1 Y 1 A LYS 263 ? CG ? A LYS 157 CG 29 1 Y 1 A LYS 263 ? CD ? A LYS 157 CD 30 1 Y 1 A LYS 263 ? CE ? A LYS 157 CE 31 1 Y 1 A LYS 263 ? NZ ? A LYS 157 NZ 32 1 Y 1 A ILE 304 ? CB ? A ILE 186 CB 33 1 Y 1 A ILE 304 ? CG1 ? A ILE 186 CG1 34 1 Y 1 A ILE 304 ? CG2 ? A ILE 186 CG2 35 1 Y 1 A ILE 304 ? CD1 ? A ILE 186 CD1 36 1 Y 1 A LEU 305 ? CB ? A LEU 187 CB 37 1 Y 1 A LEU 305 ? CG ? A LEU 187 CG 38 1 Y 1 A LEU 305 ? CD1 ? A LEU 187 CD1 39 1 Y 1 A LEU 305 ? CD2 ? A LEU 187 CD2 40 1 Y 1 A LYS 319 ? CG ? A LYS 201 CG 41 1 Y 1 A LYS 319 ? CD ? A LYS 201 CD 42 1 Y 1 A LYS 319 ? CE ? A LYS 201 CE 43 1 Y 1 A LYS 319 ? NZ ? A LYS 201 NZ # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 107 ? A MET 1 2 1 Y 1 A ALA 108 ? A ALA 2 3 1 Y 1 A GLN 286 ? A GLN 180 4 1 Y 1 A ALA 287 ? A ALA 181 5 1 Y 1 A ASN 300 ? A ASN 182 6 1 Y 1 A GLY 301 ? A GLY 183 7 1 Y 1 A GLY 302 ? A GLY 184 8 1 Y 1 A HIS 303 ? A HIS 185 9 1 Y 1 A ASP 329 ? A ASP 211 10 1 Y 1 A ALA 330 ? A ALA 212 11 1 Y 1 A PRO 331 ? A PRO 213 12 1 Y 1 A HIS 332 ? A HIS 214 13 1 Y 1 A LEU 333 ? A LEU 215 14 1 Y 1 A PRO 334 ? A PRO 216 15 1 Y 1 A GLU 335 ? A GLU 217 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 GOL C1 C N N 123 GOL O1 O N N 124 GOL C2 C N N 125 GOL O2 O N N 126 GOL C3 C N N 127 GOL O3 O N N 128 GOL H11 H N N 129 GOL H12 H N N 130 GOL HO1 H N N 131 GOL H2 H N N 132 GOL HO2 H N N 133 GOL H31 H N N 134 GOL H32 H N N 135 GOL HO3 H N N 136 GTP PG P N N 137 GTP O1G O N N 138 GTP O2G O N N 139 GTP O3G O N N 140 GTP O3B O N N 141 GTP PB P N N 142 GTP O1B O N N 143 GTP O2B O N N 144 GTP O3A O N N 145 GTP PA P N N 146 GTP O1A O N N 147 GTP O2A O N N 148 GTP "O5'" O N N 149 GTP "C5'" C N N 150 GTP "C4'" C N R 151 GTP "O4'" O N N 152 GTP "C3'" C N S 153 GTP "O3'" O N N 154 GTP "C2'" C N R 155 GTP "O2'" O N N 156 GTP "C1'" C N R 157 GTP N9 N Y N 158 GTP C8 C Y N 159 GTP N7 N Y N 160 GTP C5 C Y N 161 GTP C6 C N N 162 GTP O6 O N N 163 GTP N1 N N N 164 GTP C2 C N N 165 GTP N2 N N N 166 GTP N3 N N N 167 GTP C4 C Y N 168 GTP HOG2 H N N 169 GTP HOG3 H N N 170 GTP HOB2 H N N 171 GTP HOA2 H N N 172 GTP "H5'" H N N 173 GTP "H5''" H N N 174 GTP "H4'" H N N 175 GTP "H3'" H N N 176 GTP "HO3'" H N N 177 GTP "H2'" H N N 178 GTP "HO2'" H N N 179 GTP "H1'" H N N 180 GTP H8 H N N 181 GTP HN1 H N N 182 GTP HN21 H N N 183 GTP HN22 H N N 184 HIS N N N N 185 HIS CA C N S 186 HIS C C N N 187 HIS O O N N 188 HIS CB C N N 189 HIS CG C Y N 190 HIS ND1 N Y N 191 HIS CD2 C Y N 192 HIS CE1 C Y N 193 HIS NE2 N Y N 194 HIS OXT O N N 195 HIS H H N N 196 HIS H2 H N N 197 HIS HA H N N 198 HIS HB2 H N N 199 HIS HB3 H N N 200 HIS HD1 H N N 201 HIS HD2 H N N 202 HIS HE1 H N N 203 HIS HE2 H N N 204 HIS HXT H N N 205 HOH O O N N 206 HOH H1 H N N 207 HOH H2 H N N 208 ILE N N N N 209 ILE CA C N S 210 ILE C C N N 211 ILE O O N N 212 ILE CB C N S 213 ILE CG1 C N N 214 ILE CG2 C N N 215 ILE CD1 C N N 216 ILE OXT O N N 217 ILE H H N N 218 ILE H2 H N N 219 ILE HA H N N 220 ILE HB H N N 221 ILE HG12 H N N 222 ILE HG13 H N N 223 ILE HG21 H N N 224 ILE HG22 H N N 225 ILE HG23 H N N 226 ILE HD11 H N N 227 ILE HD12 H N N 228 ILE HD13 H N N 229 ILE HXT H N N 230 LEU N N N N 231 LEU CA C N S 232 LEU C C N N 233 LEU O O N N 234 LEU CB C N N 235 LEU CG C N N 236 LEU CD1 C N N 237 LEU CD2 C N N 238 LEU OXT O N N 239 LEU H H N N 240 LEU H2 H N N 241 LEU HA H N N 242 LEU HB2 H N N 243 LEU HB3 H N N 244 LEU HG H N N 245 LEU HD11 H N N 246 LEU HD12 H N N 247 LEU HD13 H N N 248 LEU HD21 H N N 249 LEU HD22 H N N 250 LEU HD23 H N N 251 LEU HXT H N N 252 LYS N N N N 253 LYS CA C N S 254 LYS C C N N 255 LYS O O N N 256 LYS CB C N N 257 LYS CG C N N 258 LYS CD C N N 259 LYS CE C N N 260 LYS NZ N N N 261 LYS OXT O N N 262 LYS H H N N 263 LYS H2 H N N 264 LYS HA H N N 265 LYS HB2 H N N 266 LYS HB3 H N N 267 LYS HG2 H N N 268 LYS HG3 H N N 269 LYS HD2 H N N 270 LYS HD3 H N N 271 LYS HE2 H N N 272 LYS HE3 H N N 273 LYS HZ1 H N N 274 LYS HZ2 H N N 275 LYS HZ3 H N N 276 LYS HXT H N N 277 MET N N N N 278 MET CA C N S 279 MET C C N N 280 MET O O N N 281 MET CB C N N 282 MET CG C N N 283 MET SD S N N 284 MET CE C N N 285 MET OXT O N N 286 MET H H N N 287 MET H2 H N N 288 MET HA H N N 289 MET HB2 H N N 290 MET HB3 H N N 291 MET HG2 H N N 292 MET HG3 H N N 293 MET HE1 H N N 294 MET HE2 H N N 295 MET HE3 H N N 296 MET HXT H N N 297 MG MG MG N N 298 PHE N N N N 299 PHE CA C N S 300 PHE C C N N 301 PHE O O N N 302 PHE CB C N N 303 PHE CG C Y N 304 PHE CD1 C Y N 305 PHE CD2 C Y N 306 PHE CE1 C Y N 307 PHE CE2 C Y N 308 PHE CZ C Y N 309 PHE OXT O N N 310 PHE H H N N 311 PHE H2 H N N 312 PHE HA H N N 313 PHE HB2 H N N 314 PHE HB3 H N N 315 PHE HD1 H N N 316 PHE HD2 H N N 317 PHE HE1 H N N 318 PHE HE2 H N N 319 PHE HZ H N N 320 PHE HXT H N N 321 PRO N N N N 322 PRO CA C N S 323 PRO C C N N 324 PRO O O N N 325 PRO CB C N N 326 PRO CG C N N 327 PRO CD C N N 328 PRO OXT O N N 329 PRO H H N N 330 PRO HA H N N 331 PRO HB2 H N N 332 PRO HB3 H N N 333 PRO HG2 H N N 334 PRO HG3 H N N 335 PRO HD2 H N N 336 PRO HD3 H N N 337 PRO HXT H N N 338 SER N N N N 339 SER CA C N S 340 SER C C N N 341 SER O O N N 342 SER CB C N N 343 SER OG O N N 344 SER OXT O N N 345 SER H H N N 346 SER H2 H N N 347 SER HA H N N 348 SER HB2 H N N 349 SER HB3 H N N 350 SER HG H N N 351 SER HXT H N N 352 THR N N N N 353 THR CA C N S 354 THR C C N N 355 THR O O N N 356 THR CB C N R 357 THR OG1 O N N 358 THR CG2 C N N 359 THR OXT O N N 360 THR H H N N 361 THR H2 H N N 362 THR HA H N N 363 THR HB H N N 364 THR HG1 H N N 365 THR HG21 H N N 366 THR HG22 H N N 367 THR HG23 H N N 368 THR HXT H N N 369 TRP N N N N 370 TRP CA C N S 371 TRP C C N N 372 TRP O O N N 373 TRP CB C N N 374 TRP CG C Y N 375 TRP CD1 C Y N 376 TRP CD2 C Y N 377 TRP NE1 N Y N 378 TRP CE2 C Y N 379 TRP CE3 C Y N 380 TRP CZ2 C Y N 381 TRP CZ3 C Y N 382 TRP CH2 C Y N 383 TRP OXT O N N 384 TRP H H N N 385 TRP H2 H N N 386 TRP HA H N N 387 TRP HB2 H N N 388 TRP HB3 H N N 389 TRP HD1 H N N 390 TRP HE1 H N N 391 TRP HE3 H N N 392 TRP HZ2 H N N 393 TRP HZ3 H N N 394 TRP HH2 H N N 395 TRP HXT H N N 396 TYR N N N N 397 TYR CA C N S 398 TYR C C N N 399 TYR O O N N 400 TYR CB C N N 401 TYR CG C Y N 402 TYR CD1 C Y N 403 TYR CD2 C Y N 404 TYR CE1 C Y N 405 TYR CE2 C Y N 406 TYR CZ C Y N 407 TYR OH O N N 408 TYR OXT O N N 409 TYR H H N N 410 TYR H2 H N N 411 TYR HA H N N 412 TYR HB2 H N N 413 TYR HB3 H N N 414 TYR HD1 H N N 415 TYR HD2 H N N 416 TYR HE1 H N N 417 TYR HE2 H N N 418 TYR HH H N N 419 TYR HXT H N N 420 VAL N N N N 421 VAL CA C N S 422 VAL C C N N 423 VAL O O N N 424 VAL CB C N N 425 VAL CG1 C N N 426 VAL CG2 C N N 427 VAL OXT O N N 428 VAL H H N N 429 VAL H2 H N N 430 VAL HA H N N 431 VAL HB H N N 432 VAL HG11 H N N 433 VAL HG12 H N N 434 VAL HG13 H N N 435 VAL HG21 H N N 436 VAL HG22 H N N 437 VAL HG23 H N N 438 VAL HXT H N N 439 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 GOL C1 O1 sing N N 116 GOL C1 C2 sing N N 117 GOL C1 H11 sing N N 118 GOL C1 H12 sing N N 119 GOL O1 HO1 sing N N 120 GOL C2 O2 sing N N 121 GOL C2 C3 sing N N 122 GOL C2 H2 sing N N 123 GOL O2 HO2 sing N N 124 GOL C3 O3 sing N N 125 GOL C3 H31 sing N N 126 GOL C3 H32 sing N N 127 GOL O3 HO3 sing N N 128 GTP PG O1G doub N N 129 GTP PG O2G sing N N 130 GTP PG O3G sing N N 131 GTP PG O3B sing N N 132 GTP O2G HOG2 sing N N 133 GTP O3G HOG3 sing N N 134 GTP O3B PB sing N N 135 GTP PB O1B doub N N 136 GTP PB O2B sing N N 137 GTP PB O3A sing N N 138 GTP O2B HOB2 sing N N 139 GTP O3A PA sing N N 140 GTP PA O1A doub N N 141 GTP PA O2A sing N N 142 GTP PA "O5'" sing N N 143 GTP O2A HOA2 sing N N 144 GTP "O5'" "C5'" sing N N 145 GTP "C5'" "C4'" sing N N 146 GTP "C5'" "H5'" sing N N 147 GTP "C5'" "H5''" sing N N 148 GTP "C4'" "O4'" sing N N 149 GTP "C4'" "C3'" sing N N 150 GTP "C4'" "H4'" sing N N 151 GTP "O4'" "C1'" sing N N 152 GTP "C3'" "O3'" sing N N 153 GTP "C3'" "C2'" sing N N 154 GTP "C3'" "H3'" sing N N 155 GTP "O3'" "HO3'" sing N N 156 GTP "C2'" "O2'" sing N N 157 GTP "C2'" "C1'" sing N N 158 GTP "C2'" "H2'" sing N N 159 GTP "O2'" "HO2'" sing N N 160 GTP "C1'" N9 sing N N 161 GTP "C1'" "H1'" sing N N 162 GTP N9 C8 sing Y N 163 GTP N9 C4 sing Y N 164 GTP C8 N7 doub Y N 165 GTP C8 H8 sing N N 166 GTP N7 C5 sing Y N 167 GTP C5 C6 sing N N 168 GTP C5 C4 doub Y N 169 GTP C6 O6 doub N N 170 GTP C6 N1 sing N N 171 GTP N1 C2 sing N N 172 GTP N1 HN1 sing N N 173 GTP C2 N2 sing N N 174 GTP C2 N3 doub N N 175 GTP N2 HN21 sing N N 176 GTP N2 HN22 sing N N 177 GTP N3 C4 sing N N 178 HIS N CA sing N N 179 HIS N H sing N N 180 HIS N H2 sing N N 181 HIS CA C sing N N 182 HIS CA CB sing N N 183 HIS CA HA sing N N 184 HIS C O doub N N 185 HIS C OXT sing N N 186 HIS CB CG sing N N 187 HIS CB HB2 sing N N 188 HIS CB HB3 sing N N 189 HIS CG ND1 sing Y N 190 HIS CG CD2 doub Y N 191 HIS ND1 CE1 doub Y N 192 HIS ND1 HD1 sing N N 193 HIS CD2 NE2 sing Y N 194 HIS CD2 HD2 sing N N 195 HIS CE1 NE2 sing Y N 196 HIS CE1 HE1 sing N N 197 HIS NE2 HE2 sing N N 198 HIS OXT HXT sing N N 199 HOH O H1 sing N N 200 HOH O H2 sing N N 201 ILE N CA sing N N 202 ILE N H sing N N 203 ILE N H2 sing N N 204 ILE CA C sing N N 205 ILE CA CB sing N N 206 ILE CA HA sing N N 207 ILE C O doub N N 208 ILE C OXT sing N N 209 ILE CB CG1 sing N N 210 ILE CB CG2 sing N N 211 ILE CB HB sing N N 212 ILE CG1 CD1 sing N N 213 ILE CG1 HG12 sing N N 214 ILE CG1 HG13 sing N N 215 ILE CG2 HG21 sing N N 216 ILE CG2 HG22 sing N N 217 ILE CG2 HG23 sing N N 218 ILE CD1 HD11 sing N N 219 ILE CD1 HD12 sing N N 220 ILE CD1 HD13 sing N N 221 ILE OXT HXT sing N N 222 LEU N CA sing N N 223 LEU N H sing N N 224 LEU N H2 sing N N 225 LEU CA C sing N N 226 LEU CA CB sing N N 227 LEU CA HA sing N N 228 LEU C O doub N N 229 LEU C OXT sing N N 230 LEU CB CG sing N N 231 LEU CB HB2 sing N N 232 LEU CB HB3 sing N N 233 LEU CG CD1 sing N N 234 LEU CG CD2 sing N N 235 LEU CG HG sing N N 236 LEU CD1 HD11 sing N N 237 LEU CD1 HD12 sing N N 238 LEU CD1 HD13 sing N N 239 LEU CD2 HD21 sing N N 240 LEU CD2 HD22 sing N N 241 LEU CD2 HD23 sing N N 242 LEU OXT HXT sing N N 243 LYS N CA sing N N 244 LYS N H sing N N 245 LYS N H2 sing N N 246 LYS CA C sing N N 247 LYS CA CB sing N N 248 LYS CA HA sing N N 249 LYS C O doub N N 250 LYS C OXT sing N N 251 LYS CB CG sing N N 252 LYS CB HB2 sing N N 253 LYS CB HB3 sing N N 254 LYS CG CD sing N N 255 LYS CG HG2 sing N N 256 LYS CG HG3 sing N N 257 LYS CD CE sing N N 258 LYS CD HD2 sing N N 259 LYS CD HD3 sing N N 260 LYS CE NZ sing N N 261 LYS CE HE2 sing N N 262 LYS CE HE3 sing N N 263 LYS NZ HZ1 sing N N 264 LYS NZ HZ2 sing N N 265 LYS NZ HZ3 sing N N 266 LYS OXT HXT sing N N 267 MET N CA sing N N 268 MET N H sing N N 269 MET N H2 sing N N 270 MET CA C sing N N 271 MET CA CB sing N N 272 MET CA HA sing N N 273 MET C O doub N N 274 MET C OXT sing N N 275 MET CB CG sing N N 276 MET CB HB2 sing N N 277 MET CB HB3 sing N N 278 MET CG SD sing N N 279 MET CG HG2 sing N N 280 MET CG HG3 sing N N 281 MET SD CE sing N N 282 MET CE HE1 sing N N 283 MET CE HE2 sing N N 284 MET CE HE3 sing N N 285 MET OXT HXT sing N N 286 PHE N CA sing N N 287 PHE N H sing N N 288 PHE N H2 sing N N 289 PHE CA C sing N N 290 PHE CA CB sing N N 291 PHE CA HA sing N N 292 PHE C O doub N N 293 PHE C OXT sing N N 294 PHE CB CG sing N N 295 PHE CB HB2 sing N N 296 PHE CB HB3 sing N N 297 PHE CG CD1 doub Y N 298 PHE CG CD2 sing Y N 299 PHE CD1 CE1 sing Y N 300 PHE CD1 HD1 sing N N 301 PHE CD2 CE2 doub Y N 302 PHE CD2 HD2 sing N N 303 PHE CE1 CZ doub Y N 304 PHE CE1 HE1 sing N N 305 PHE CE2 CZ sing Y N 306 PHE CE2 HE2 sing N N 307 PHE CZ HZ sing N N 308 PHE OXT HXT sing N N 309 PRO N CA sing N N 310 PRO N CD sing N N 311 PRO N H sing N N 312 PRO CA C sing N N 313 PRO CA CB sing N N 314 PRO CA HA sing N N 315 PRO C O doub N N 316 PRO C OXT sing N N 317 PRO CB CG sing N N 318 PRO CB HB2 sing N N 319 PRO CB HB3 sing N N 320 PRO CG CD sing N N 321 PRO CG HG2 sing N N 322 PRO CG HG3 sing N N 323 PRO CD HD2 sing N N 324 PRO CD HD3 sing N N 325 PRO OXT HXT sing N N 326 SER N CA sing N N 327 SER N H sing N N 328 SER N H2 sing N N 329 SER CA C sing N N 330 SER CA CB sing N N 331 SER CA HA sing N N 332 SER C O doub N N 333 SER C OXT sing N N 334 SER CB OG sing N N 335 SER CB HB2 sing N N 336 SER CB HB3 sing N N 337 SER OG HG sing N N 338 SER OXT HXT sing N N 339 THR N CA sing N N 340 THR N H sing N N 341 THR N H2 sing N N 342 THR CA C sing N N 343 THR CA CB sing N N 344 THR CA HA sing N N 345 THR C O doub N N 346 THR C OXT sing N N 347 THR CB OG1 sing N N 348 THR CB CG2 sing N N 349 THR CB HB sing N N 350 THR OG1 HG1 sing N N 351 THR CG2 HG21 sing N N 352 THR CG2 HG22 sing N N 353 THR CG2 HG23 sing N N 354 THR OXT HXT sing N N 355 TRP N CA sing N N 356 TRP N H sing N N 357 TRP N H2 sing N N 358 TRP CA C sing N N 359 TRP CA CB sing N N 360 TRP CA HA sing N N 361 TRP C O doub N N 362 TRP C OXT sing N N 363 TRP CB CG sing N N 364 TRP CB HB2 sing N N 365 TRP CB HB3 sing N N 366 TRP CG CD1 doub Y N 367 TRP CG CD2 sing Y N 368 TRP CD1 NE1 sing Y N 369 TRP CD1 HD1 sing N N 370 TRP CD2 CE2 doub Y N 371 TRP CD2 CE3 sing Y N 372 TRP NE1 CE2 sing Y N 373 TRP NE1 HE1 sing N N 374 TRP CE2 CZ2 sing Y N 375 TRP CE3 CZ3 doub Y N 376 TRP CE3 HE3 sing N N 377 TRP CZ2 CH2 doub Y N 378 TRP CZ2 HZ2 sing N N 379 TRP CZ3 CH2 sing Y N 380 TRP CZ3 HZ3 sing N N 381 TRP CH2 HH2 sing N N 382 TRP OXT HXT sing N N 383 TYR N CA sing N N 384 TYR N H sing N N 385 TYR N H2 sing N N 386 TYR CA C sing N N 387 TYR CA CB sing N N 388 TYR CA HA sing N N 389 TYR C O doub N N 390 TYR C OXT sing N N 391 TYR CB CG sing N N 392 TYR CB HB2 sing N N 393 TYR CB HB3 sing N N 394 TYR CG CD1 doub Y N 395 TYR CG CD2 sing Y N 396 TYR CD1 CE1 sing Y N 397 TYR CD1 HD1 sing N N 398 TYR CD2 CE2 doub Y N 399 TYR CD2 HD2 sing N N 400 TYR CE1 CZ doub Y N 401 TYR CE1 HE1 sing N N 402 TYR CE2 CZ sing Y N 403 TYR CE2 HE2 sing N N 404 TYR CZ OH sing N N 405 TYR OH HH sing N N 406 TYR OXT HXT sing N N 407 VAL N CA sing N N 408 VAL N H sing N N 409 VAL N H2 sing N N 410 VAL CA C sing N N 411 VAL CA CB sing N N 412 VAL CA HA sing N N 413 VAL C O doub N N 414 VAL C OXT sing N N 415 VAL CB CG1 sing N N 416 VAL CB CG2 sing N N 417 VAL CB HB sing N N 418 VAL CG1 HG11 sing N N 419 VAL CG1 HG12 sing N N 420 VAL CG1 HG13 sing N N 421 VAL CG2 HG21 sing N N 422 VAL CG2 HG22 sing N N 423 VAL CG2 HG23 sing N N 424 VAL OXT HXT sing N N 425 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 "GUANOSINE-5'-TRIPHOSPHATE" GTP 3 'MAGNESIUM ION' MG 4 GLYCEROL GOL 5 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1PZN _pdbx_initial_refinement_model.details 'PDB ENTRY 1PZN CHAIN A' #