HEADER TRANSFERASE 30-AUG-12 4B8R TITLE CRYSTAL STRUCTURE OF THERMOCOCCUS LITORALIS ADP-DEPENDENT GLUCOKINASE TITLE 2 (GK) COMPND MOL_ID: 1; COMPND 2 MOLECULE: ADP-DEPENDENT GLUCOKINASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ADP-GK, ADPGK; COMPND 5 EC: 2.7.1.147; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOCOCCUS LITORALIS; SOURCE 3 ORGANISM_TAXID: 2265; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET-17B KEYWDS TRANSFERASE, RIBOKINASE SUPERFAMILY EXPDTA X-RAY DIFFRACTION AUTHOR A.HERRERA-MORANDE,J.A.RIVAS-PARDO,F.J.FERNANDEZ,V.GUIXE,M.C.VEGA REVDAT 3 20-DEC-23 4B8R 1 REMARK REVDAT 2 17-JUL-13 4B8R 1 JRNL REVDAT 1 10-JUL-13 4B8R 0 JRNL AUTH J.A.RIVAS-PARDO,A.HERRERA-MORANDE,V.CASTRO-FERNANDEZ, JRNL AUTH 2 F.J.FERNANDEZ,M.C.VEGA,V.GUIXE JRNL TITL CRYSTAL STRUCTURE, SAXS AND KINETIC MECHANISM OF JRNL TITL 2 HYPERTHERMOPHILIC ADP-DEPENDENT GLUCOKINASE FROM JRNL TITL 3 THERMOCOCCUS LITORALIS REVEAL A CONSERVED MECHANISM FOR JRNL TITL 4 CATALYSIS. JRNL REF PLOS ONE V. 8 66687 2013 JRNL REFN ESSN 1932-6203 JRNL PMID 23818958 JRNL DOI 10.1371/JOURNAL.PONE.0066687 REMARK 2 REMARK 2 RESOLUTION. 2.05 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.05 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.28 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 53124 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.172 REMARK 3 R VALUE (WORKING SET) : 0.170 REMARK 3 FREE R VALUE : 0.211 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2811 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.05 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.10 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3347 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.82 REMARK 3 BIN R VALUE (WORKING SET) : 0.2680 REMARK 3 BIN FREE R VALUE SET COUNT : 182 REMARK 3 BIN FREE R VALUE : 0.3090 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3785 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 217 REMARK 3 SOLVENT ATOMS : 293 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 30.80 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 36.75 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.10000 REMARK 3 B22 (A**2) : 0.10000 REMARK 3 B33 (A**2) : -0.16000 REMARK 3 B12 (A**2) : 0.05000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.124 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.126 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.086 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.122 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.961 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.941 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4118 ; 0.023 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5519 ; 2.058 ; 2.005 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 482 ; 5.973 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 202 ;36.775 ;23.713 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 719 ;14.628 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 37 ;16.624 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 612 ; 0.170 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3015 ; 0.012 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT. U REMARK 3 VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 4B8R COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1290053913. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 3.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID23-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8726 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 72183 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.050 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.7 REMARK 200 DATA REDUNDANCY : 9.400 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 19.4000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.05 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 12.20 REMARK 200 R MERGE FOR SHELL (I) : 0.56000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1GC5 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 70.44 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 14 % (W/V) POLYETHYLENE GLYCOL (PEG) REMARK 280 6000, 0.2 M LISO4, 0.1 M SODIUM CITRATE PH 3.6 AND 5 MM REMARK 280 DITHIOTHREITOL (DTT). REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 86.37267 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 43.18633 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 43.18633 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 86.37267 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2138 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NH1 ARG A 117 O HOH A 2085 1.75 REMARK 500 OD1 ASP A 429 O HOH A 2270 1.93 REMARK 500 O HOH A 2071 O HOH A 2207 1.98 REMARK 500 NE ARG A 256 O HOH A 2180 2.02 REMARK 500 OD1 ASP A 335 O HOH A 2220 2.03 REMARK 500 O2 SO4 A 1498 O HOH A 2291 2.07 REMARK 500 OE2 GLU A 247 O HOH A 2174 2.14 REMARK 500 NH1 ARG A 256 O HOH A 2181 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 111 CE2 TRP A 111 CD2 0.081 REMARK 500 TRP A 113 CE2 TRP A 113 CD2 0.084 REMARK 500 HIS A 184 CG HIS A 184 CD2 0.087 REMARK 500 TYR A 185 CB TYR A 185 CG 0.097 REMARK 500 HIS A 265 CG HIS A 265 CD2 0.059 REMARK 500 HIS A 277 CG HIS A 277 CD2 0.066 REMARK 500 HIS A 352 CG HIS A 352 CD2 0.056 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 216 NE - CZ - NH1 ANGL. DEV. = 4.5 DEGREES REMARK 500 ARG A 216 NE - CZ - NH2 ANGL. DEV. = -5.8 DEGREES REMARK 500 LEU A 266 CB - CG - CD1 ANGL. DEV. = -11.1 DEGREES REMARK 500 ARG A 369 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 430 NE - CZ - NH1 ANGL. DEV. = 3.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 31 69.37 -104.13 REMARK 500 ASN A 144 56.70 -118.86 REMARK 500 PHE A 196 -121.63 49.80 REMARK 500 ALA A 210 41.47 -107.97 REMARK 500 ASN A 305 -169.86 -114.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2121 DISTANCE = 7.35 ANGSTROMS REMARK 525 HOH A2292 DISTANCE = 6.17 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1468 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1469 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1470 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1471 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1472 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1473 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1474 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1475 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1476 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1477 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1478 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1479 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1480 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1481 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1482 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS A 1483 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE TRS A 1484 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTT A 1485 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DTT A 1486 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1487 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1488 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1489 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1490 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1491 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 1492 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 1493 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PGE A 1494 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1495 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1496 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1497 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1498 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1499 REMARK 800 REMARK 800 SITE_IDENTIFIER: DC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4B8S RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THERMOCOCCUS LITORALIS ADP-DEPENDENT REMARK 900 GLUCOKINASE (GK) DBREF 4B8R A 1 467 UNP Q7M537 GLKA_THELI 1 467 SEQRES 1 A 467 MET LYS GLU SER LEU LYS ASP ARG ILE ARG LEU TRP LYS SEQRES 2 A 467 ARG LEU TYR VAL ASN ALA PHE GLU ASN ALA LEU ASN ALA SEQRES 3 A 467 ILE PRO ASN VAL LYS GLY VAL LEU LEU ALA TYR ASN THR SEQRES 4 A 467 ASN ILE ASP ALA ILE LYS TYR LEU ASP LYS ASP ASP LEU SEQRES 5 A 467 GLU LYS ARG VAL THR GLU ILE GLY LYS GLU LYS VAL PHE SEQRES 6 A 467 GLU ILE ILE GLU ASN PRO PRO GLU LYS ILE SER SER ILE SEQRES 7 A 467 GLU GLU LEU LEU GLY GLY ILE LEU ARG SER ILE LYS LEU SEQRES 8 A 467 GLY LYS ALA MET GLU TRP PHE VAL GLU SER GLU GLU VAL SEQRES 9 A 467 ARG ARG TYR LEU ARG GLU TRP GLY TRP ASP GLU LEU ARG SEQRES 10 A 467 ILE GLY GLY GLN ALA GLY ILE MET ALA ASN LEU LEU GLY SEQRES 11 A 467 GLY VAL TYR ARG ILE PRO THR ILE VAL HIS VAL PRO GLN SEQRES 12 A 467 ASN PRO LYS LEU GLN ALA GLU LEU PHE VAL ASP GLY PRO SEQRES 13 A 467 ILE TYR VAL PRO VAL PHE GLU GLY ASN LYS LEU LYS LEU SEQRES 14 A 467 VAL HIS PRO LYS ASP ALA ILE ALA GLU GLU GLU GLU LEU SEQRES 15 A 467 ILE HIS TYR ILE TYR GLU PHE PRO ARG GLY PHE GLN VAL SEQRES 16 A 467 PHE ASP VAL GLN ALA PRO ARG GLU ASN ARG PHE ILE ALA SEQRES 17 A 467 ASN ALA ASP ASP TYR ASN ALA ARG VAL TYR MET ARG ARG SEQRES 18 A 467 GLU PHE ARG GLU GLY PHE GLU GLU ILE THR ARG ASN VAL SEQRES 19 A 467 GLU LEU ALA ILE ILE SER GLY LEU GLN VAL LEU LYS GLU SEQRES 20 A 467 TYR TYR PRO ASP GLY THR THR TYR ARG ASP VAL LEU ASP SEQRES 21 A 467 ARG VAL GLU SER HIS LEU ASN ILE LEU ASN ARG TYR ASN SEQRES 22 A 467 VAL LYS SER HIS PHE GLU PHE ALA TYR THR ALA ASN ARG SEQRES 23 A 467 ARG VAL ARG GLU ALA LEU VAL GLU LEU LEU PRO LYS PHE SEQRES 24 A 467 THR SER VAL GLY LEU ASN GLU VAL GLU LEU ALA SER ILE SEQRES 25 A 467 MET GLU ILE ILE GLY ASP GLU GLU LEU ALA LYS GLU VAL SEQRES 26 A 467 LEU GLU GLY HIS ILE PHE SER VAL ILE ASP ALA MET ASN SEQRES 27 A 467 VAL LEU MET ASP GLU THR GLY ILE GLU ARG ILE HIS PHE SEQRES 28 A 467 HIS THR TYR GLY TYR TYR LEU ALA LEU THR GLN TYR ARG SEQRES 29 A 467 GLY GLU GLU VAL ARG ASP ALA LEU LEU PHE ALA SER LEU SEQRES 30 A 467 ALA ALA ALA ALA LYS ALA MET LYS GLY ASN LEU GLU ARG SEQRES 31 A 467 ILE GLU GLN ILE ARG ASP ALA LEU SER VAL PRO THR ASN SEQRES 32 A 467 GLU ARG ALA ILE VAL LEU GLU GLU GLU LEU GLU LYS GLU SEQRES 33 A 467 PHE THR GLU PHE GLU ASN GLY LEU ILE ASP MET VAL ASP SEQRES 34 A 467 ARG GLN LEU ALA PHE VAL PRO THR LYS ILE VAL ALA SER SEQRES 35 A 467 PRO LYS SER THR VAL GLY ILE GLY ASP THR ILE SER SER SEQRES 36 A 467 SER ALA PHE VAL SER GLU PHE GLY MET ARG LYS ARG HET GOL A1468 6 HET GOL A1469 6 HET GOL A1470 6 HET GOL A1471 6 HET GOL A1472 6 HET GOL A1473 6 HET GOL A1474 6 HET GOL A1475 6 HET GOL A1476 6 HET GOL A1477 6 HET GOL A1478 6 HET GOL A1479 6 HET GOL A1480 6 HET GOL A1481 6 HET GOL A1482 6 HET TRS A1483 8 HET TRS A1484 8 HET DTT A1485 8 HET DTT A1486 8 HET PEG A1487 7 HET PEG A1488 7 HET PEG A1489 7 HET PEG A1490 7 HET PEG A1491 7 HET PGE A1492 10 HET PGE A1493 10 HET PGE A1494 10 HET SO4 A1495 5 HET SO4 A1496 5 HET SO4 A1497 5 HET SO4 A1498 5 HET SO4 A1499 5 HET SO4 A1500 5 HETNAM GOL GLYCEROL HETNAM TRS 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL HETNAM DTT 2,3-DIHYDROXY-1,4-DITHIOBUTANE HETNAM PEG DI(HYDROXYETHYL)ETHER HETNAM PGE TRIETHYLENE GLYCOL HETNAM SO4 SULFATE ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL HETSYN TRS TRIS BUFFER HETSYN DTT 1,4-DITHIOTHREITOL FORMUL 2 GOL 15(C3 H8 O3) FORMUL 17 TRS 2(C4 H12 N O3 1+) FORMUL 19 DTT 2(C4 H10 O2 S2) FORMUL 21 PEG 5(C4 H10 O3) FORMUL 26 PGE 3(C6 H14 O4) FORMUL 29 SO4 6(O4 S 2-) FORMUL 35 HOH *293(H2 O) HELIX 1 1 SER A 4 ILE A 27 1 24 HELIX 2 2 PRO A 28 VAL A 30 5 3 HELIX 3 3 ASP A 48 GLY A 60 1 13 HELIX 4 4 GLY A 60 ASN A 70 1 11 HELIX 5 5 SER A 77 GLY A 92 1 16 HELIX 6 6 SER A 101 GLY A 112 1 12 HELIX 7 7 GLY A 120 GLY A 130 1 11 HELIX 8 8 PRO A 145 GLU A 150 1 6 HELIX 9 9 HIS A 171 ILE A 176 5 6 HELIX 10 10 ARG A 220 GLY A 226 1 7 HELIX 11 11 GLY A 226 ARG A 232 1 7 HELIX 12 12 GLY A 241 LEU A 245 5 5 HELIX 13 13 TYR A 255 TYR A 272 1 18 HELIX 14 14 ASN A 285 GLU A 294 1 10 HELIX 15 15 LEU A 295 PHE A 299 5 5 HELIX 16 16 ASN A 305 GLY A 317 1 13 HELIX 17 17 ASP A 318 GLU A 327 1 10 HELIX 18 18 HIS A 329 GLY A 345 1 17 HELIX 19 19 GLU A 366 GLY A 386 1 21 HELIX 20 20 ARG A 390 VAL A 400 5 11 HELIX 21 21 ASN A 403 PHE A 417 1 15 HELIX 22 22 GLY A 448 LYS A 466 1 19 SHEET 1 AA12 LYS A 166 VAL A 170 0 SHEET 2 AA12 ILE A 157 GLU A 163 -1 O VAL A 159 N VAL A 170 SHEET 3 AA12 THR A 137 VAL A 139 1 O THR A 137 N TYR A 158 SHEET 4 AA12 VAL A 33 ALA A 36 1 O VAL A 33 N ILE A 138 SHEET 5 AA12 LEU A 236 ILE A 239 1 O LEU A 236 N LEU A 34 SHEET 6 AA12 LYS A 275 GLU A 279 1 O LYS A 275 N ALA A 237 SHEET 7 AA12 SER A 301 LEU A 304 1 O SER A 301 N PHE A 278 SHEET 8 AA12 ARG A 348 HIS A 352 1 O ARG A 348 N VAL A 302 SHEET 9 AA12 TYR A 356 THR A 361 -1 O LEU A 358 N PHE A 351 SHEET 10 AA12 GLN A 431 PRO A 436 -1 O GLN A 431 N THR A 361 SHEET 11 AA12 LEU A 424 ASP A 426 -1 O ILE A 425 N LEU A 432 SHEET 12 AA12 GLU A 419 GLU A 421 -1 N PHE A 420 O LEU A 424 SHEET 1 AB 5 MET A 95 PHE A 98 0 SHEET 2 AB 5 ASN A 204 ALA A 210 1 O ARG A 205 N MET A 95 SHEET 3 AB 5 ILE A 183 PHE A 189 -1 O ILE A 183 N ALA A 210 SHEET 4 AB 5 ASN A 40 TYR A 46 1 O ILE A 41 N HIS A 184 SHEET 5 AB 5 GLU A 115 GLY A 119 -1 O GLU A 115 N ILE A 44 SHEET 1 AC 2 GLN A 194 VAL A 195 0 SHEET 2 AC 2 VAL A 198 GLN A 199 -1 O VAL A 198 N VAL A 195 CISPEP 1 ALA A 36 TYR A 37 0 13.00 SITE 1 AC1 1 ASN A 233 SITE 1 AC2 8 LYS A 45 TYR A 46 ASP A 51 TRP A 111 SITE 2 AC2 8 ASP A 114 HOH A2044 HOH A2046 HOH A2081 SITE 1 AC3 5 ALA A 281 TYR A 282 ASN A 305 VAL A 307 SITE 2 AC3 5 GLU A 308 SITE 1 AC4 6 MET A 341 ASP A 342 GLN A 362 ASP A 429 SITE 2 AC4 6 ARG A 430 GOL A1475 SITE 1 AC5 6 TYR A 354 ASN A 403 ARG A 405 PGE A1494 SITE 2 AC5 6 SO4 A1498 HOH A2227 SITE 1 AC6 9 ALA A 379 ALA A 380 LYS A 438 ILE A 439 SITE 2 AC6 9 VAL A 440 ILE A 449 HOH A2228 HOH A2272 SITE 3 AC6 9 HOH A2282 SITE 1 AC7 7 GLU A 102 ARG A 106 ARG A 109 PHE A 420 SITE 2 AC7 7 GLU A 421 HOH A2068 HOH A2078 SITE 1 AC8 3 ASP A 342 GLU A 343 GOL A1471 SITE 1 AC9 8 VAL A 159 PRO A 160 ALA A 175 ARG A 220 SITE 2 AC9 8 GLU A 222 SO4 A1500 HOH A2101 HOH A2283 SITE 1 BC1 7 PRO A 71 ARG A 87 LYS A 93 MET A 95 SITE 2 BC1 7 TRP A 97 HOH A2053 HOH A2065 SITE 1 BC2 7 ASP A 260 ARG A 261 SER A 264 GLU A 327 SITE 2 BC2 7 HIS A 329 HOH A2183 HOH A2189 SITE 1 BC3 7 PHE A 162 GLY A 164 ASP A 174 ILE A 176 SITE 2 BC3 7 ARG A 221 HOH A2123 HOH A2133 SITE 1 BC4 3 SER A 101 GLU A 102 GLU A 103 SITE 1 BC5 7 THR A 446 VAL A 447 GLY A 448 ILE A 449 SITE 2 BC5 7 GLY A 450 HOH A2274 HOH A2285 SITE 1 BC6 5 SER A 264 ASN A 267 ARG A 271 HOH A2189 SITE 2 BC6 5 HOH A2193 SITE 1 BC7 6 TYR A 282 ARG A 286 ARG A 289 SER A 311 SITE 2 BC7 6 GLU A 314 PEG A1487 SITE 1 BC8 8 GLU A 279 GLY A 303 LEU A 304 ASN A 305 SITE 2 BC8 8 GLU A 308 HIS A 352 GLY A 450 ASP A 451 SITE 1 BC9 8 ASN A 40 ASP A 42 GLU A 96 GLY A 119 SITE 2 BC9 8 GLY A 120 ILE A 124 HIS A 184 ILE A 207 SITE 1 CC1 5 ARG A 369 GLU A 421 ASN A 422 HOH A2018 SITE 2 CC1 5 HOH A2287 SITE 1 CC2 3 ALA A 310 GLU A 314 TRS A1483 SITE 1 CC3 10 LYS A 2 ARG A 8 PRO A 142 TYR A 213 SITE 2 CC3 10 TYR A 218 MET A 219 ARG A 220 VAL A 408 SITE 3 CC3 10 GLU A 411 HOH A2105 SITE 1 CC4 6 ARG A 117 ILE A 118 ASN A 127 GLU A 150 SITE 2 CC4 6 LEU A 151 PHE A 152 SITE 1 CC5 3 GLU A 247 TYR A 248 ASN A 285 SITE 1 CC6 2 ARG A 271 TYR A 272 SITE 1 CC7 7 GLU A 347 TYR A 363 GLU A 461 ARG A 465 SITE 2 CC7 7 SO4 A1495 HOH A2196 HOH A2288 SITE 1 CC8 8 ASN A 270 ASN A 273 VAL A 274 LYS A 275 SITE 2 CC8 8 PRO A 297 THR A 300 GLU A 347 HOH A2207 SITE 1 CC9 8 ARG A 224 ARG A 261 GLY A 328 HIS A 329 SITE 2 CC9 8 ILE A 330 GLU A 412 GOL A1472 HOH A2217 SITE 1 DC1 4 ASN A 273 LYS A 275 PGE A1492 HOH A2195 SITE 1 DC2 3 LYS A 385 ARG A 390 GLN A 393 SITE 1 DC3 7 ARG A 117 GLU A 188 ARG A 205 LYS A 444 SITE 2 DC3 7 SER A 445 THR A 446 VAL A 447 SITE 1 DC4 7 ARG A 224 ARG A 405 GOL A1472 HOH A2256 SITE 2 DC4 7 HOH A2257 HOH A2290 HOH A2291 SITE 1 DC5 1 ARG A 134 SITE 1 DC6 9 ARG A 220 ARG A 221 GLU A 222 LYS A 415 SITE 2 DC6 9 GOL A1476 HOH A2122 HOH A2156 HOH A2283 SITE 3 DC6 9 HOH A2284 CRYST1 109.104 109.104 129.559 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009166 0.005292 0.000000 0.00000 SCALE2 0.000000 0.010583 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007718 0.00000