HEADER HYDROLASE 14-SEP-12 4BAH TITLE THROMBIN IN COMPLEX WITH INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: THROMBIN LIGHT CHAIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: COAGULATION FACTOR II; COMPND 5 EC: 3.4.21.5; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: THROMBIN HEAVY CHAIN; COMPND 8 CHAIN: B; COMPND 9 SYNONYM: COAGULATION FACTOR II; COMPND 10 EC: 3.4.21.5; COMPND 11 MOL_ID: 3; COMPND 12 MOLECULE: HIRUDIN VARIANT-1; COMPND 13 CHAIN: D; COMPND 14 FRAGMENT: RESIDUES 62-71; COMPND 15 SYNONYM: HIRUDIN-1, HIRUDIN-I, LEPIRUDIN; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 MOL_ID: 2; SOURCE 6 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 7 ORGANISM_COMMON: HUMAN; SOURCE 8 ORGANISM_TAXID: 9606; SOURCE 9 MOL_ID: 3; SOURCE 10 SYNTHETIC: YES; SOURCE 11 ORGANISM_SCIENTIFIC: HIRUDO MEDICINALIS; SOURCE 12 ORGANISM_TAXID: 6421 KEYWDS HYDROLASE, SERINE PROTEASE, THROMBIN INHIBITOR EXPDTA X-RAY DIFFRACTION AUTHOR Y.XUE,D.MUSIL REVDAT 5 29-JUL-20 4BAH 1 COMPND REMARK HETNAM LINK REVDAT 5 2 1 SITE REVDAT 4 05-JUL-17 4BAH 1 REMARK REVDAT 3 13-MAR-13 4BAH 1 REMARK SITE REVDAT 2 20-FEB-13 4BAH 1 JRNL REVDAT 1 16-JAN-13 4BAH 0 JRNL AUTH J.WINQUIST,S.GESCHWINDNER,Y.XUE,L.GUSTAVSSON,D.MUSIL, JRNL AUTH 2 J.DEINUM,U.H.DANIELSON JRNL TITL IDENTIFICATION OF STRUCTURE-KINETIC AND JRNL TITL 2 STRUCTURE-THERMODYNAMIC RELATIONSHIPS FOR THROMBIN JRNL TITL 3 INHIBITORS. JRNL REF BIOCHEMISTRY V. 52 613 2013 JRNL REFN ISSN 0006-2960 JRNL PMID 23290007 JRNL DOI 10.1021/BI301333Z REMARK 2 REMARK 2 RESOLUTION. 1.94 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.11.1 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.94 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 22.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 25709 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.162 REMARK 3 R VALUE (WORKING SET) : 0.161 REMARK 3 FREE R VALUE : 0.194 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1310 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 13 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 1.94 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.02 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.74 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2871 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.1888 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2717 REMARK 3 BIN R VALUE (WORKING SET) : 0.1861 REMARK 3 BIN FREE R VALUE : 0.2363 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.36 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 154 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2361 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 47 REMARK 3 SOLVENT ATOMS : 376 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 20.91 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.90 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -4.06780 REMARK 3 B22 (A**2) : 3.29580 REMARK 3 B33 (A**2) : 0.77200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 3.86490 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.148 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.128 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.136 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.123 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.927 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 2478 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 3355 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 866 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 67 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 353 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 2478 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : 0 ; 5.000 ; SEMIHARMONIC REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 302 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 3051 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.06 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.66 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 15.11 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: IDEAL-DIST CONTACT TERM CONTACT SETUP. REMARK 3 RESIDUE TYPES WITHOUT CCP4 ATOM TYPE IN LIBRARY=NAG TYS. NUMBER REMARK 3 OF ATOMS WITH PROPER CCP4 ATOM TYPE=2760. NUMBER WITH APPROX REMARK 3 DEFAULT CCP4 ATOM TYPE=30. NUMBER TREATED BY BAD NON-BONDED REMARK 3 CONTACTS=2. REMARK 4 REMARK 4 4BAH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 14-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1290054088. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25709 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.940 REMARK 200 RESOLUTION RANGE LOW (A) : 22.510 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 4.000 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.94 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.99 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.9 REMARK 200 DATA REDUNDANCY IN SHELL : 3.60 REMARK 200 R MERGE FOR SHELL (I) : 0.21000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: OTHER REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.81 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.55 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 34.70500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 35.75500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 34.70500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 35.75500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4930 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 13090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -26.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 1 REMARK 465 PHE A 2 REMARK 465 GLY A 3 REMARK 465 SER A 4 REMARK 465 GLY A 5 REMARK 465 ARG A 36 REMARK 465 THR B 184A REMARK 465 ALA B 184B REMARK 465 ASN B 184C REMARK 465 VAL B 184D REMARK 465 GLY B 184E REMARK 465 LYS B 184F REMARK 465 ASP D 353 REMARK 465 GLY D 354 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLY A 35 CA C O REMARK 470 TRP B 184 CA C O CB CG CD1 CD2 REMARK 470 TRP B 184 NE1 CE2 CE3 CZ2 CZ3 CH2 REMARK 470 GLU B 289 CA C O CB CG CD OE1 REMARK 470 GLU B 289 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 15 -89.85 -125.44 REMARK 500 TYR B 83 82.15 -151.41 REMARK 500 ASN B 89 73.83 -157.64 REMARK 500 HIS B 102 -60.48 -132.89 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH B2009 DISTANCE = 6.85 ANGSTROMS REMARK 525 HOH B2052 DISTANCE = 5.92 ANGSTROMS REMARK 525 HOH B2059 DISTANCE = 6.45 ANGSTROMS REMARK 525 HOH D2011 DISTANCE = 8.19 ANGSTROMS REMARK 525 HOH D2013 DISTANCE = 6.85 ANGSTROMS REMARK 525 HOH D2014 DISTANCE = 7.08 ANGSTROMS REMARK 525 HOH D2015 DISTANCE = 7.29 ANGSTROMS REMARK 525 HOH D2016 DISTANCE = 9.68 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B1292 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 LYS B 204 O REMARK 620 2 THR B 207 O 82.3 REMARK 620 3 PHE B 245 O 100.4 98.0 REMARK 620 4 HOH B2218 O 65.4 76.2 165.0 REMARK 620 5 HOH B2219 O 80.1 162.1 82.0 99.2 REMARK 620 6 HOH B2261 O 173.8 94.2 85.2 108.8 103.6 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B1293 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG B 263 O REMARK 620 2 LYS B 266 O 96.2 REMARK 620 3 HOH B2240 O 163.1 68.2 REMARK 620 4 HOH B2241 O 96.9 96.6 79.3 REMARK 620 5 HOH B2254 O 98.4 79.5 85.4 164.6 REMARK 620 6 HOH B2274 O 109.7 153.8 86.4 84.7 92.3 REMARK 620 N 1 2 3 4 5 REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: DSSP REMARK 700 THE SHEETS PRESENTED AS "BB" IN EACH CHAIN ON SHEET RECORDS REMARK 700 BELOW IS ACTUALLY AN 6-STRANDED BARREL THIS IS REPRESENTED BY REMARK 700 A 7-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS REMARK 700 ARE IDENTICAL. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BAK RELATED DB: PDB REMARK 900 THROMBIN IN COMPLEX WITH INHIBITOR REMARK 900 RELATED ID: 4BAM RELATED DB: PDB REMARK 900 THROMBIN IN COMPLEX WITH INHIBITOR REMARK 900 RELATED ID: 4BAN RELATED DB: PDB REMARK 900 THROMBIN IN COMPLEX WITH INHIBITOR REMARK 900 RELATED ID: 4BAO RELATED DB: PDB REMARK 900 THROMBIN IN COMPLEX WITH INHIBITOR REMARK 900 RELATED ID: 4BAQ RELATED DB: PDB REMARK 900 THROMBIN IN COMPLEX WITH INHIBITOR DBREF 4BAH A 1 36 UNP P00734 THRB_HUMAN 328 363 DBREF 4BAH B 37 289 UNP P00734 THRB_HUMAN 364 622 DBREF 4BAH D 353 364 UNP P01050 HIRV1_HIRME 53 64 SEQADV 4BAH GLY D 361 UNP P01050 GLU 61 CONFLICT SEQRES 1 A 36 THR PHE GLY SER GLY GLU ALA ASP CYS GLY LEU ARG PRO SEQRES 2 A 36 LEU PHE GLU LYS LYS SER LEU GLU ASP LYS THR GLU ARG SEQRES 3 A 36 GLU LEU LEU GLU SER TYR ILE ASP GLY ARG SEQRES 1 B 259 ILE VAL GLU GLY SER ASP ALA GLU ILE GLY MET SER PRO SEQRES 2 B 259 TRP GLN VAL MET LEU PHE ARG LYS SER PRO GLN GLU LEU SEQRES 3 B 259 LEU CYS GLY ALA SER LEU ILE SER ASP ARG TRP VAL LEU SEQRES 4 B 259 THR ALA ALA HIS CYS LEU LEU TYR PRO PRO TRP ASP LYS SEQRES 5 B 259 ASN PHE THR GLU ASN ASP LEU LEU VAL ARG ILE GLY LYS SEQRES 6 B 259 HIS SER ARG THR ARG TYR GLU ARG ASN ILE GLU LYS ILE SEQRES 7 B 259 SER MET LEU GLU LYS ILE TYR ILE HIS PRO ARG TYR ASN SEQRES 8 B 259 TRP ARG GLU ASN LEU ASP ARG ASP ILE ALA LEU MET LYS SEQRES 9 B 259 LEU LYS LYS PRO VAL ALA PHE SER ASP TYR ILE HIS PRO SEQRES 10 B 259 VAL CYS LEU PRO ASP ARG GLU THR ALA ALA SER LEU LEU SEQRES 11 B 259 GLN ALA GLY TYR LYS GLY ARG VAL THR GLY TRP GLY ASN SEQRES 12 B 259 LEU LYS GLU THR TRP THR ALA ASN VAL GLY LYS GLY GLN SEQRES 13 B 259 PRO SER VAL LEU GLN VAL VAL ASN LEU PRO ILE VAL GLU SEQRES 14 B 259 ARG PRO VAL CYS LYS ASP SER THR ARG ILE ARG ILE THR SEQRES 15 B 259 ASP ASN MET PHE CYS ALA GLY TYR LYS PRO ASP GLU GLY SEQRES 16 B 259 LYS ARG GLY ASP ALA CYS GLU GLY ASP SER GLY GLY PRO SEQRES 17 B 259 PHE VAL MET LYS SER PRO PHE ASN ASN ARG TRP TYR GLN SEQRES 18 B 259 MET GLY ILE VAL SER TRP GLY GLU GLY CYS ASP ARG ASP SEQRES 19 B 259 GLY LYS TYR GLY PHE TYR THR HIS VAL PHE ARG LEU LYS SEQRES 20 B 259 LYS TRP ILE GLN LYS VAL ILE ASP GLN PHE GLY GLU SEQRES 1 D 12 ASP GLY ASP PHE GLU GLU ILE PRO GLY GLU TYS LEU MODRES 4BAH ASN B 89 ASN GLYCOSYLATION SITE MODRES 4BAH TYS D 363 TYR O-SULFO-L-TYROSINE HET TYS D 363 16 HET NAG B 901 14 HET MEL B1291 33 HET NA B1292 1 HET NA B1293 1 HETNAM TYS O-SULFO-L-TYROSINE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM MEL [((1R)-2-{(2S)-2-[({4-[AMINO(IMINO) HETNAM 2 MEL METHYL]BENZYL}AMINO)CARBONYL]AZETIDINYL}-1-CYCLOHEXYL- HETNAM 3 MEL 2-OXOETHYL)AMINO]ACETIC ACID HETNAM NA SODIUM ION HETSYN MEL MELAGATRAN (ASTRA-ZENECA) FORMUL 3 TYS C9 H11 N O6 S FORMUL 4 NAG C8 H15 N O6 FORMUL 5 MEL C22 H31 N5 O4 FORMUL 6 NA 2(NA 1+) FORMUL 8 HOH *376(H2 O) HELIX 1 1 PHE A 15 SER A 19 5 5 HELIX 2 2 THR A 24 TYR A 32 1 9 HELIX 3 3 ALA B 77 CYS B 80 5 4 HELIX 4 4 PRO B 84 ASP B 87 5 4 HELIX 5 5 THR B 91 ASN B 93 5 3 HELIX 6 6 ASP B 158 LEU B 166 1 9 HELIX 7 7 GLU B 199 SER B 206 1 8 HELIX 8 8 LYS B 221 GLY B 225 5 5 HELIX 9 9 LEU B 276 GLY B 288 1 13 HELIX 10 10 PRO D 360 LEU D 364 5 5 SHEET 1 BA 7 SER B 41 ASP B 42 0 SHEET 2 BA 7 GLN B 191 PRO B 196 -1 O VAL B 192 N SER B 41 SHEET 3 BA 7 LYS B 171 GLY B 176 -1 O GLY B 172 N LEU B 195 SHEET 4 BA 7 PRO B 238 LYS B 242 -1 O PRO B 238 N THR B 175 SHEET 5 BA 7 TRP B 249 TRP B 257 -1 O TYR B 250 N MET B 241 SHEET 6 BA 7 GLY B 268 HIS B 272 -1 O PHE B 269 N SER B 256 SHEET 7 BA 7 MET B 215 ALA B 218 -1 O PHE B 216 N TYR B 270 SHEET 1 BB 7 GLN B 51 ARG B 56 0 SHEET 2 BB 7 GLU B 61 LEU B 68 -1 O GLU B 61 N ARG B 56 SHEET 3 BB 7 TRP B 73 THR B 76 -1 O LEU B 75 N SER B 67 SHEET 4 BB 7 ALA B 137 LEU B 141 -1 O ALA B 137 N THR B 76 SHEET 5 BB 7 LYS B 113 ILE B 122 -1 N GLU B 118 O LYS B 140 SHEET 6 BB 7 LEU B 95 ILE B 99 -1 O LEU B 95 N LEU B 117 SHEET 7 BB 7 GLN B 51 ARG B 56 -1 O MET B 53 N ARG B 98 SHEET 1 BC 2 LEU B 82 TYR B 83 0 SHEET 2 BC 2 LYS B 88 ASN B 89 -1 O LYS B 88 N TYR B 83 SSBOND 1 CYS A 9 CYS B 155 1555 1555 2.03 SSBOND 2 CYS B 64 CYS B 80 1555 1555 2.04 SSBOND 3 CYS B 203 CYS B 217 1555 1555 2.01 SSBOND 4 CYS B 231 CYS B 261 1555 1555 2.04 LINK ND2 ASN B 89 C1 NAG B 901 1555 1555 1.44 LINK C GLU D 362 N TYS D 363 1555 1555 1.35 LINK C TYS D 363 N LEU D 364 1555 1555 1.36 LINK O LYS B 204 NA NA B1292 1555 1555 2.41 LINK O THR B 207 NA NA B1292 1555 1555 2.31 LINK O PHE B 245 NA NA B1292 4546 1555 2.29 LINK O ARG B 263 NA NA B1293 1555 1555 2.24 LINK O LYS B 266 NA NA B1293 1555 1555 2.30 LINK NA NA B1292 O HOH B2218 1555 1555 2.95 LINK NA NA B1292 O HOH B2219 1555 1555 2.27 LINK NA NA B1292 O HOH B2261 1555 4546 2.33 LINK NA NA B1293 O HOH B2240 1555 1555 2.64 LINK NA NA B1293 O HOH B2241 1555 1555 2.66 LINK NA NA B1293 O HOH B2254 1555 1555 2.31 LINK NA NA B1293 O HOH B2274 1555 1555 2.58 CISPEP 1 SER B 58 PRO B 59 0 -3.42 CRYST1 69.410 71.510 72.160 90.00 100.34 90.00 C 1 2 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014407 0.000000 0.002629 0.00000 SCALE2 0.000000 0.013984 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014087 0.00000