HEADER TRANSFERASE 12-MAR-13 4BES TITLE CRYSTAL STRUCTURE OF THE LEGIONELLA PNEUMOPHILA FIC DOMAIN-CONTAINING TITLE 2 EFFECTOR ANKX PROTEIN IN COMPLEX WITH CYTIDINE MONOPHOSPHATE AND TITLE 3 PHOSPHOCHOLINE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOCHOLINE TRANSFERASE ANKX; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: FIC AND ANKYRIN REPEATS DOMAINS, RESIDUES 2-484; COMPND 5 SYNONYM: PC TRANSFERASE, ANKYRIN REPEAT-CONTAINING PROTEIN X; COMPND 6 EC: 2.7.1.-; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEGIONELLA PNEUMOPHILA SUBSP. PNEUMOPHILA STR. SOURCE 3 PHILADELPHIA 1; SOURCE 4 ORGANISM_TAXID: 272624; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VARIANT: ROSETTA PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PDEST17 KEYWDS TRANSFERASE, PHOSPHOCHOLINATION, TYPE IV SECRETION SYSTEM EFFECTOR EXPDTA X-RAY DIFFRACTION AUTHOR V.CAMPANACCI,S.MUKHERJEE,C.R.ROY,J.CHERFILS REVDAT 3 20-DEC-23 4BES 1 REMARK REVDAT 2 29-MAY-13 4BES 1 JRNL REVDAT 1 24-APR-13 4BES 0 JRNL AUTH V.CAMPANACCI,S.MUKHERJEE,C.R.ROY,J.CHERFILS JRNL TITL STRUCTURE OF THE LEGIONELLA EFFECTOR ANKX REVEALS THE JRNL TITL 2 MECHANISM OF PHOSPHOCHOLINE TRANSFER BY THE FIC DOMAIN. JRNL REF EMBO J. V. 32 1469 2013 JRNL REFN ISSN 0261-4189 JRNL PMID 23572077 JRNL DOI 10.1038/EMBOJ.2013.82 REMARK 2 REMARK 2 RESOLUTION. 2.54 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : BUSTER 2.10.0 REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER, REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN, REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.54 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 19367 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.201 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.380 REMARK 3 FREE R VALUE TEST SET COUNT : 1041 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 10 REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.54 REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.68 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.71 REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2761 REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2231 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2606 REMARK 3 BIN R VALUE (WORKING SET) : 0.2198 REMARK 3 BIN FREE R VALUE : 0.2786 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.61 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 155 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3736 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 47 REMARK 3 SOLVENT ATOMS : 54 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 55.92 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 55.86 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.08110 REMARK 3 B22 (A**2) : 10.59720 REMARK 3 B33 (A**2) : -10.51610 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.328 REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : 0.511 REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : 0.289 REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.504 REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : 0.292 REMARK 3 REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797 REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.924 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.889 REMARK 3 REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15 REMARK 3 TERM COUNT WEIGHT FUNCTION. REMARK 3 BOND LENGTHS : 3895 ; 2.000 ; HARMONIC REMARK 3 BOND ANGLES : 5289 ; 2.000 ; HARMONIC REMARK 3 TORSION ANGLES : 1365 ; 2.000 ; SINUSOIDAL REMARK 3 TRIGONAL CARBON PLANES : 105 ; 2.000 ; HARMONIC REMARK 3 GENERAL PLANES : 554 ; 5.000 ; HARMONIC REMARK 3 ISOTROPIC THERMAL FACTORS : 3895 ; 20.000 ; HARMONIC REMARK 3 BAD NON-BONDED CONTACTS : NULL ; NULL ; NULL REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL REMARK 3 CHIRAL IMPROPER TORSION : 491 ; 5.000 ; SEMIHARMONIC REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL REMARK 3 IDEAL-DIST CONTACT TERM : 4532 ; 4.000 ; SEMIHARMONIC REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.010 REMARK 3 BOND ANGLES (DEGREES) : 1.21 REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 2.78 REMARK 3 OTHER TORSION ANGLES (DEGREES) : 22.74 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND RESSEQ 6-220 REMARK 3 ORIGIN FOR THE GROUP (A): -17.1342 30.9185 1.5129 REMARK 3 T TENSOR REMARK 3 T11: -0.2865 T22: -0.3444 REMARK 3 T33: -0.1544 T12: 0.0349 REMARK 3 T13: -0.0717 T23: -0.0193 REMARK 3 L TENSOR REMARK 3 L11: 1.5964 L22: 1.8322 REMARK 3 L33: 1.2061 L12: 0.2032 REMARK 3 L13: -0.0896 L23: -0.0147 REMARK 3 S TENSOR REMARK 3 S11: -0.0070 S12: -0.1168 S13: 0.2343 REMARK 3 S21: 0.2041 S22: 0.0590 S23: -0.0226 REMARK 3 S31: -0.1808 S32: 0.0652 S33: -0.0520 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND RESSEQ 221-351 REMARK 3 ORIGIN FOR THE GROUP (A): -19.7827 17.1397 7.3827 REMARK 3 T TENSOR REMARK 3 T11: -0.1897 T22: -0.2772 REMARK 3 T33: -0.1197 T12: 0.0507 REMARK 3 T13: -0.0423 T23: 0.0173 REMARK 3 L TENSOR REMARK 3 L11: 1.4185 L22: 1.6497 REMARK 3 L33: 1.4427 L12: -0.7728 REMARK 3 L13: -0.0226 L23: 0.2378 REMARK 3 S TENSOR REMARK 3 S11: -0.1372 S12: -0.1507 S13: -0.2017 REMARK 3 S21: 0.3904 S22: 0.1151 S23: -0.0532 REMARK 3 S31: 0.1381 S32: 0.0575 S33: 0.0221 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND RESSEQ 352-484 REMARK 3 ORIGIN FOR THE GROUP (A): -12.1856 6.2205 -15.2052 REMARK 3 T TENSOR REMARK 3 T11: -0.2620 T22: -0.3374 REMARK 3 T33: -0.1861 T12: -0.0005 REMARK 3 T13: 0.0007 T23: -0.0302 REMARK 3 L TENSOR REMARK 3 L11: 1.8033 L22: 1.7025 REMARK 3 L33: 0.6349 L12: -0.6046 REMARK 3 L13: -0.4319 L23: -0.2950 REMARK 3 S TENSOR REMARK 3 S11: 0.0148 S12: 0.1674 S13: -0.0845 REMARK 3 S21: -0.2909 S22: 0.0183 S23: 0.0039 REMARK 3 S31: 0.0038 S32: 0.0622 S33: -0.0331 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: IDEAL-DIST CONTACT TERM CONTACT SETUP. REMARK 3 ALL ATOMS HAVE CCP4 ATOM TYPE FROM LIBRARY REMARK 4 REMARK 4 4BES COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-MAR-13. REMARK 100 THE DEPOSITION ID IS D_1290056081. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9801 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19367 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.540 REMARK 200 RESOLUTION RANGE LOW (A) : 43.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 5.800 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.4200 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.54 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.68 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 5.70 REMARK 200 R MERGE FOR SHELL (I) : 0.75000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4BEP REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.45 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM SULFATE, 30% PEG 5000 REMARK 280 MME, 0.1 M MES PH 6.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 42.13750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 61.15200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.13750 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 61.15200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 39460 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -111.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 VAL A 2 REMARK 465 LYS A 3 REMARK 465 ILE A 4 REMARK 465 MET A 5 REMARK 465 LYS A 86 REMARK 465 LYS A 87 REMARK 465 VAL A 88 REMARK 465 GLU A 89 REMARK 465 GLU A 90 REMARK 465 LEU A 91 REMARK 465 GLN A 92 REMARK 465 GLU A 93 REMARK 465 LYS A 94 REMARK 465 ASN A 95 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 324 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 66 121.87 -171.23 REMARK 500 THR A 101 -71.75 -114.02 REMARK 500 ASN A 242 -82.34 -118.58 REMARK 500 PHE A 264 30.37 -83.86 REMARK 500 PHE A 328 42.70 -105.88 REMARK 500 ASP A 330 30.59 -86.33 REMARK 500 GLU A 349 52.00 -101.33 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2054 DISTANCE = 5.84 ANGSTROMS REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 PHOSPHOCHOLINE (PC): PRODUCED AFTER ADDITION OF CDP-CHOLINE REMARK 600 CYTIDINE-5'-MONOPHOSPHATE (C5P): PRODUCED AFTER ADDITION OF REMARK 600 CDP-CHOLINE REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C5P A 1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PC A 2000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 3002 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BEP RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LEGIONELLA PNEUMOPHILA FIC DOMAIN- REMARK 900 CONTAINING EFFECTOR ANKX PROTEIN (APO-FORM) REMARK 900 RELATED ID: 4BER RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LEGIONELLA PNEUMOPHILA FIC DOMAIN- REMARK 900 CONTAINING EFFECTOR ANKX PROTEIN IN COMPLEX WITH CYTIDINE REMARK 900 MONOPHOSPHATE REMARK 900 RELATED ID: 4BET RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE LEGIONELLA PNEUMOPHILA FIC DOMAIN- REMARK 900 CONTAINING EFFECTOR ANKX PROTEIN (INACTIVE H229A MUTANT) IN COMPLEX REMARK 900 WITH CYTIDINE-DIPHOSPHATE-CHOLINE REMARK 999 REMARK 999 SEQUENCE REMARK 999 L247P (CLONING ARTEFACT) DBREF 4BES A 2 484 UNP Q5ZXN6 ANKX_LEGPH 2 484 SEQADV 4BES GLY A 1 UNP Q5ZXN6 EXPRESSION TAG SEQADV 4BES PRO A 247 UNP Q5ZXN6 LEU 247 ENGINEERED MUTATION SEQRES 1 A 484 GLY VAL LYS ILE MET PRO ASN LEU PRO GLY LEU TYR PHE SEQRES 2 A 484 LEU GLN ALA TYR PRO SER GLU GLU ILE TRP ARG LEU PHE SEQRES 3 A 484 VAL ASP GLY ARG PHE TRP SER LYS GLU ASN GLY TRP ARG SEQRES 4 A 484 GLY TYR GLU SER ARG GLU PRO GLY CYS LEU ASN ALA ALA SEQRES 5 A 484 LEU GLU SER LEU CYS SER ILE ALA LEU GLN VAL GLU LYS SEQRES 6 A 484 SER GLY GLU GLU PHE GLU LEU SER VAL ASP LEU ILE LYS SEQRES 7 A 484 ARG ILE HIS LYS LYS CYS GLY LYS LYS VAL GLU GLU LEU SEQRES 8 A 484 GLN GLU LYS ASN PRO GLY GLU LEU ARG THR ASP GLU PRO SEQRES 9 A 484 VAL SER PHE GLY ILE PRO ALA GLY ARG ALA SER ILE LYS SEQRES 10 A 484 GLY ILE GLU GLU PHE LEU SER LEU VAL PHE LEU THR GLU SEQRES 11 A 484 GLY GLY ALA GLU PHE GLY PRO GLY LYS ALA GLY PRO PHE SEQRES 12 A 484 GLY PRO ARG PHE ASP LYS ASN TYR PHE LYS ASN LEU ASN SEQRES 13 A 484 PRO GLU GLN ILE PRO ASP LEU ALA LYS GLN ILE TYR PHE SEQRES 14 A 484 ASP MET CYS LYS TYR GLY HIS SER ASN THR ASN HIS PHE SEQRES 15 A 484 TYR LEU ALA VAL MET LYS ASN VAL ASP VAL TYR LEU GLU SEQRES 16 A 484 LYS ILE THR GLN SER TYR ASN LYS GLU ILE LYS THR ALA SEQRES 17 A 484 GLU THR LEU ASP GLU LYS LEU LYS ILE ILE VAL LYS HIS SEQRES 18 A 484 ILE ARG MET TYR GLU VAL LEU HIS PRO PHE ARG ASP ALA SEQRES 19 A 484 ASN GLY ARG THR PHE VAL ASN ASN LEU LEU ASN ILE PRO SEQRES 20 A 484 LEU MET GLN GLN GLY LEU PRO PRO ALA THR PHE TYR GLU SEQRES 21 A 484 PRO ASN VAL PHE ASP LEU TYR SER ALA GLU GLU LEU VAL SEQRES 22 A 484 VAL VAL VAL LYS GLU ALA ILE PHE ASN THR VAL GLU ILE SEQRES 23 A 484 ILE GLU GLN SER LYS ARG LYS THR PRO ILE THR LEU TYR SEQRES 24 A 484 GLY TYR HIS SER SER LEU GLU GLU GLN THR LYS PHE ARG SEQRES 25 A 484 ASP MET LEU ASP SER PRO SER TYR GLU LYS ILE LYS HIS SEQRES 26 A 484 MET ASP PHE SER ASP LEU ASN PRO GLU LYS LEU HIS LEU SEQRES 27 A 484 LYS THR GLN LYS CYS LEU SER SER LEU ASN GLU GLN TYR SEQRES 28 A 484 PRO LEU HIS ARG GLY ALA ILE TYR LEU SER ASP PRO GLY SEQRES 29 A 484 GLU ILE LYS LEU LEU LEU SER ASN ARG ASN GLU SER GLN SEQRES 30 A 484 ILE ASN GLN GLN ILE GLU GLN GLY ALA PRO PRO ILE TYR SEQRES 31 A 484 VAL GLY LYS THR PRO ALA HIS LEU ALA VAL ILE SER GLY SEQRES 32 A 484 ASN MET ALA MET LEU ASP GLU LEU ILE ALA LYS LYS ALA SEQRES 33 A 484 ASP LEU SER LEU GLN ASP TYR ASP GLY LYS THR ALA LEU SEQRES 34 A 484 HIS TYR ALA ALA GLU CYS GLY ASN MET GLN ILE MET GLY SEQRES 35 A 484 LYS ILE LEU LYS VAL VAL LEU SER GLN GLU ASP ALA ILE SEQRES 36 A 484 LYS VAL LEU ASN ILE LYS ASP ASN HIS GLY LYS THR ALA SEQRES 37 A 484 PHE HIS TYR ALA ALA GLU PHE GLY THR PRO GLU LEU ILE SEQRES 38 A 484 SER ALA LEU HET C5P A1000 35 HET PC A2000 26 HET SO4 A3000 5 HET SO4 A3001 5 HET SO4 A3002 5 HETNAM C5P CYTIDINE-5'-MONOPHOSPHATE HETNAM PC PHOSPHOCHOLINE HETNAM SO4 SULFATE ION FORMUL 2 C5P C9 H14 N3 O8 P FORMUL 3 PC C5 H15 N O4 P 1+ FORMUL 4 SO4 3(O4 S 2-) FORMUL 7 HOH *54(H2 O) HELIX 1 1 GLY A 10 TYR A 17 1 8 HELIX 2 2 PRO A 18 PHE A 26 5 9 HELIX 3 3 TRP A 38 GLU A 45 1 8 HELIX 4 4 GLY A 47 LYS A 65 1 19 HELIX 5 5 SER A 73 GLY A 85 1 13 HELIX 6 6 PRO A 110 ARG A 113 5 4 HELIX 7 7 SER A 115 LEU A 125 1 11 HELIX 8 8 LEU A 125 GLY A 131 1 7 HELIX 9 9 GLN A 159 GLY A 175 1 17 HELIX 10 10 ASN A 189 ALA A 208 1 20 HELIX 11 11 THR A 210 LEU A 228 1 19 HELIX 12 12 ALA A 234 VAL A 240 1 7 HELIX 13 13 LEU A 244 GLN A 251 1 8 HELIX 14 14 SER A 268 ARG A 292 1 25 HELIX 15 15 THR A 297 TYR A 301 5 5 HELIX 16 16 SER A 304 LEU A 315 1 12 HELIX 17 17 SER A 317 HIS A 325 1 9 HELIX 18 18 ASN A 332 SER A 345 1 14 HELIX 19 19 SER A 346 ASN A 348 5 3 HELIX 20 20 TYR A 351 LEU A 360 1 10 HELIX 21 21 ASP A 362 SER A 371 1 10 HELIX 22 22 ASN A 374 ASN A 379 1 6 HELIX 23 23 THR A 394 GLY A 403 1 10 HELIX 24 24 ASN A 404 LYS A 414 1 11 HELIX 25 25 THR A 427 GLY A 436 1 10 HELIX 26 26 ASN A 437 SER A 450 1 14 HELIX 27 27 ASP A 453 ASN A 459 1 7 HELIX 28 28 THR A 467 GLU A 474 1 8 SHEET 1 AA 4 SER A 106 ILE A 109 0 SHEET 2 AA 4 HIS A 181 LEU A 184 -1 O HIS A 181 N ILE A 109 SHEET 3 AA 4 GLU A 134 GLY A 141 -1 O GLU A 134 N LEU A 184 SHEET 4 AA 4 GLY A 144 PHE A 147 -1 O GLY A 144 N GLY A 141 SITE 1 AC1 15 ASP A 28 ARG A 30 PHE A 31 TYR A 41 SITE 2 AC1 15 ARG A 44 CYS A 48 ALA A 234 ASN A 235 SITE 3 AC1 15 GLY A 236 ARG A 237 PRO A 261 ASN A 262 SITE 4 AC1 15 PC A2000 HOH A2030 SO4 A3002 SITE 1 AC2 11 PHE A 107 GLU A 226 HIS A 229 ASP A 233 SITE 2 AC2 11 ALA A 234 ASN A 235 ASN A 262 C5P A1000 SITE 3 AC2 11 HOH A2030 HOH A2034 SO4 A3002 SITE 1 AC3 6 SER A 124 LEU A 125 VAL A 126 PHE A 127 SITE 2 AC3 6 MET A 224 ILE A 481 SITE 1 AC4 5 PRO A 110 GLY A 112 ARG A 113 SER A 177 SITE 2 AC4 5 GLU A 260 SITE 1 AC5 6 ARG A 30 ARG A 113 ASN A 262 C5P A1000 SITE 2 AC5 6 PC A2000 HOH A2053 CRYST1 84.275 122.304 54.985 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011866 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008176 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018187 0.00000