HEADER TOXIN 09-APR-13 4BI3 TITLE STRUCTURE AND FUNCTION OF AMIDASE TOXIN - ANTITOXIN TITLE 2 COMBINATIONS ASSOCIATED WITH THE TYPE VI SECRETION SYSTEM TITLE 3 OF SERRATIA MARCESCENS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: SSP1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SERRATIA MARCESCENS; SOURCE 3 ORGANISM_TAXID: 615; SOURCE 4 STRAIN: DB10; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET KEYWDS TOXIN EXPDTA X-RAY DIFFRACTION AUTHOR V.SRIKANNATHASAN,G.ENGLISH,N.K.BUI,K.TRUNK,P.E.F.O.ROURKE,V.A.RAO, AUTHOR 2 W.VOLLMER,S.J.COULTHURST,W.N.HUNTER REVDAT 3 18-DEC-13 4BI3 1 JRNL REVDAT 2 11-DEC-13 4BI3 1 JRNL REVDAT 1 19-JUN-13 4BI3 0 JRNL AUTH V.SRIKANNATHASAN,G.ENGLISH,N.K.BUI,K.TRUNK,P.E.F.O.ROURKE, JRNL AUTH 2 V.A.RAO,W.VOLLMER,S.J.COULTHURST,W.N.HUNTER JRNL TITL STRUCTURAL BASIS FOR TYPE VI SECRETED PEPTIDOGLYCAN JRNL TITL 2 DL-ENDOPEPTIDASE FUNCTION, SPECIFICITY AND NEUTRALIZATION JRNL TITL 3 IN SERRATIA MARCESCENS JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 69 2468 2013 JRNL REFN ISSN 0907-4449 JRNL PMID 24311588 JRNL DOI 10.1107/S0907444913022725 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 54.23 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.30 REMARK 3 NUMBER OF REFLECTIONS : 29862 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.20881 REMARK 3 R VALUE (WORKING SET) : 0.20732 REMARK 3 FREE R VALUE : 0.23685 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.0 REMARK 3 FREE R VALUE TEST SET COUNT : 1586 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.850 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.898 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1911 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 91.83 REMARK 3 BIN R VALUE (WORKING SET) : 0.259 REMARK 3 BIN FREE R VALUE SET COUNT : 102 REMARK 3 BIN FREE R VALUE : 0.304 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2565 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 28 REMARK 3 SOLVENT ATOMS : 300 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.425 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.32 REMARK 3 B22 (A**2) : 0.29 REMARK 3 B33 (A**2) : 0.02 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.157 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.140 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.088 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.061 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.921 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.897 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2699 ; 0.006 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3650 ; 0.967 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 334 ; 5.046 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 113 ;33.695 ;24.071 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 468 ;11.805 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;20.333 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 382 ; 0.069 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2028 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 71 REMARK 3 ORIGIN FOR THE GROUP (A): 28.3953 9.1014 23.3597 REMARK 3 T TENSOR REMARK 3 T11: 0.0177 T22: 0.0202 REMARK 3 T33: 0.0255 T12: -0.0034 REMARK 3 T13: 0.0109 T23: 0.0024 REMARK 3 L TENSOR REMARK 3 L11: 1.2826 L22: 1.2848 REMARK 3 L33: 1.0990 L12: -0.7024 REMARK 3 L13: 0.3323 L23: -0.9328 REMARK 3 S TENSOR REMARK 3 S11: -0.0265 S12: 0.0101 S13: -0.0465 REMARK 3 S21: 0.0073 S22: 0.0240 S23: 0.0535 REMARK 3 S31: -0.0443 S32: 0.0011 S33: 0.0025 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 72 A 93 REMARK 3 ORIGIN FOR THE GROUP (A): 29.7095 16.2495 28.0900 REMARK 3 T TENSOR REMARK 3 T11: 0.1076 T22: 0.0273 REMARK 3 T33: 0.0197 T12: 0.0317 REMARK 3 T13: 0.0276 T23: 0.0067 REMARK 3 L TENSOR REMARK 3 L11: 4.6757 L22: 0.9979 REMARK 3 L33: 0.9496 L12: 0.7358 REMARK 3 L13: -0.2543 L23: -0.8243 REMARK 3 S TENSOR REMARK 3 S11: -0.0449 S12: -0.0012 S13: 0.2053 REMARK 3 S21: 0.0144 S22: 0.1142 S23: 0.0491 REMARK 3 S31: -0.1760 S32: -0.1456 S33: -0.0692 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 94 A 111 REMARK 3 ORIGIN FOR THE GROUP (A): 49.3217 12.3273 28.3000 REMARK 3 T TENSOR REMARK 3 T11: 0.0359 T22: 0.0602 REMARK 3 T33: 0.0032 T12: -0.0081 REMARK 3 T13: -0.0087 T23: 0.0001 REMARK 3 L TENSOR REMARK 3 L11: 6.4411 L22: 1.4577 REMARK 3 L33: 5.8046 L12: -1.8781 REMARK 3 L13: -4.3738 L23: 0.8544 REMARK 3 S TENSOR REMARK 3 S11: -0.0274 S12: -0.3929 S13: 0.0793 REMARK 3 S21: 0.0921 S22: 0.0508 S23: -0.0382 REMARK 3 S31: -0.1814 S32: 0.1540 S33: -0.0234 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 112 A 163 REMARK 3 ORIGIN FOR THE GROUP (A): 44.8141 6.3764 22.0733 REMARK 3 T TENSOR REMARK 3 T11: 0.0230 T22: 0.0234 REMARK 3 T33: 0.0331 T12: 0.0067 REMARK 3 T13: 0.0171 T23: 0.0165 REMARK 3 L TENSOR REMARK 3 L11: 1.2893 L22: 0.3644 REMARK 3 L33: 1.5696 L12: 0.1654 REMARK 3 L13: -0.4245 L23: -0.0640 REMARK 3 S TENSOR REMARK 3 S11: -0.0260 S12: -0.0191 S13: -0.1051 REMARK 3 S21: 0.0092 S22: -0.0112 S23: -0.0198 REMARK 3 S31: -0.0102 S32: 0.0971 S33: 0.0372 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 33 REMARK 3 ORIGIN FOR THE GROUP (A): 53.8499 9.5363 6.5576 REMARK 3 T TENSOR REMARK 3 T11: 0.0175 T22: 0.0314 REMARK 3 T33: 0.0141 T12: -0.0033 REMARK 3 T13: 0.0142 T23: 0.0036 REMARK 3 L TENSOR REMARK 3 L11: 1.0144 L22: 2.4365 REMARK 3 L33: 0.8614 L12: -0.1202 REMARK 3 L13: 0.0438 L23: -0.3293 REMARK 3 S TENSOR REMARK 3 S11: 0.0092 S12: 0.0146 S13: -0.0022 REMARK 3 S21: 0.0112 S22: -0.0196 S23: 0.0392 REMARK 3 S31: 0.0535 S32: -0.0346 S33: 0.0105 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 34 B 93 REMARK 3 ORIGIN FOR THE GROUP (A): 64.3689 15.3494 3.4913 REMARK 3 T TENSOR REMARK 3 T11: 0.0278 T22: 0.0356 REMARK 3 T33: 0.0391 T12: -0.0042 REMARK 3 T13: 0.0064 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 0.5730 L22: 0.5408 REMARK 3 L33: 0.8355 L12: 0.0707 REMARK 3 L13: 0.0901 L23: -0.1489 REMARK 3 S TENSOR REMARK 3 S11: 0.0017 S12: -0.0253 S13: 0.0499 REMARK 3 S21: 0.0051 S22: 0.0234 S23: -0.0096 REMARK 3 S31: -0.0974 S32: 0.0215 S33: -0.0251 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 94 B 111 REMARK 3 ORIGIN FOR THE GROUP (A): 67.4480 -5.5554 -0.6645 REMARK 3 T TENSOR REMARK 3 T11: 0.0434 T22: 0.0306 REMARK 3 T33: 0.0811 T12: 0.0063 REMARK 3 T13: -0.0473 T23: 0.0215 REMARK 3 L TENSOR REMARK 3 L11: 2.3502 L22: 3.7181 REMARK 3 L33: 7.6277 L12: 0.4228 REMARK 3 L13: 3.2634 L23: 3.5157 REMARK 3 S TENSOR REMARK 3 S11: 0.1884 S12: 0.0862 S13: -0.1571 REMARK 3 S21: 0.2434 S22: -0.0108 S23: -0.2416 REMARK 3 S31: 0.3427 S32: 0.1849 S33: -0.1776 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 112 B 163 REMARK 3 ORIGIN FOR THE GROUP (A): 58.4718 -1.7386 -2.3666 REMARK 3 T TENSOR REMARK 3 T11: 0.0343 T22: 0.0175 REMARK 3 T33: 0.0263 T12: -0.0018 REMARK 3 T13: -0.0032 T23: -0.0180 REMARK 3 L TENSOR REMARK 3 L11: 1.0694 L22: 1.0877 REMARK 3 L33: 2.0091 L12: 0.1712 REMARK 3 L13: -0.2878 L23: -0.2654 REMARK 3 S TENSOR REMARK 3 S11: -0.0242 S12: 0.0840 S13: -0.0803 REMARK 3 S21: -0.0375 S22: 0.0151 S23: 0.0552 REMARK 3 S31: 0.1115 S32: -0.0197 S33: 0.0091 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 4BI3 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-APR-13. REMARK 100 THE PDBE ID CODE IS EBI-56426. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU MICROMAX-007 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.5418 REMARK 200 MONOCHROMATOR : CU REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RIGAKU (SATURN 944 HG) REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 31054 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.85 REMARK 200 RESOLUTION RANGE LOW (A) : 48.75 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 200 DATA REDUNDANCY : 16 REMARK 200 R MERGE (I) : 0.07 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 33.70 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.2 REMARK 200 DATA REDUNDANCY IN SHELL : 9.5 REMARK 200 R MERGE FOR SHELL (I) : 0.24 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 10.20 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTORICKSHAW REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.46 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M POTASSIUM SULPHATE, 20% REMARK 280 PEG3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.41400 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 48.75200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 32.63000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 48.75200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.41400 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 32.63000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2660 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16430 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -66.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OH A TYR B 29 O HOH B 2038 1.70 REMARK 500 O HOH B 2021 O HOH B 2139 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 148 -61.51 -100.95 REMARK 500 ASN B 43 111.66 -161.05 REMARK 500 LYS B 125 66.29 63.21 REMARK 500 TYR B 129 118.40 -160.38 REMARK 500 HIS B 149 143.88 -170.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K A1167 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 15 OG REMARK 620 2 HOH A2138 O 85.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 K B1166 K REMARK 620 N RES CSSEQI ATOM REMARK 620 1 PHE B 65 O REMARK 620 2 THR B 80 O 148.6 REMARK 620 3 HOH A2045 O 106.0 98.7 REMARK 620 4 HOH A2046 O 79.8 125.3 77.2 REMARK 620 5 THR B 80 OG1 102.0 68.3 70.1 146.5 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1164 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B1165 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1164 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1165 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A1166 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A1167 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K A1168 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE K B1166 DBREF 4BI3 A 1 163 PDB 4BI3 4BI3 1 163 DBREF 4BI3 B 1 163 PDB 4BI3 4BI3 1 163 SEQRES 1 A 163 MET LYS PRO LEU TYR ARG GLN LEU LYS SER SER HIS TYR SEQRES 2 A 163 SER SER ASP TYR SER SER PRO GLY TYR LEU ALA ALA GLU SEQRES 3 A 163 ALA VAL TYR ALA GLU ILE GLY TYR GLU LEU ASP THR LEU SEQRES 4 A 163 LEU LYS GLN ASN PRO GLY TYR ALA ASN THR CYS ALA VAL SEQRES 5 A 163 ARG MET SER LEU ALA LEU LEU LYS THR GLY ILE SER PHE SEQRES 6 A 163 LYS GLY ARG LEU PRO ILE LYS LYS GLY ALA TYR LYS GLY SEQRES 7 A 163 LYS THR ILE GLU PRO GLY ALA LYS LEU LEU ALA ASP GLN SEQRES 8 A 163 LEU HIS ARG SER SER SER PHE GLY LYS ALA LYS ILE PHE SEQRES 9 A 163 PHE ASN ALA PRO ASP ALA GLU LYS GLY ILE GLY ASN LYS SEQRES 10 A 163 LYS GLY VAL VAL PHE PHE ASN LYS ILE THR ASN TYR ASP SEQRES 11 A 163 GLY GLY HIS ILE ASP LEU ILE GLU PRO GLU ASN SER LEU SEQRES 12 A 163 LEU THR CYS HIS SER HIS CYS TYR PHE ASN CYS LYS GLU SEQRES 13 A 163 VAL TRP PHE TRP GLU LEU SER SEQRES 1 B 163 MET LYS PRO LEU TYR ARG GLN LEU LYS SER SER HIS TYR SEQRES 2 B 163 SER SER ASP TYR SER SER PRO GLY TYR LEU ALA ALA GLU SEQRES 3 B 163 ALA VAL TYR ALA GLU ILE GLY TYR GLU LEU ASP THR LEU SEQRES 4 B 163 LEU LYS GLN ASN PRO GLY TYR ALA ASN THR CYS ALA VAL SEQRES 5 B 163 ARG MET SER LEU ALA LEU LEU LYS THR GLY ILE SER PHE SEQRES 6 B 163 LYS GLY ARG LEU PRO ILE LYS LYS GLY ALA TYR LYS GLY SEQRES 7 B 163 LYS THR ILE GLU PRO GLY ALA LYS LEU LEU ALA ASP GLN SEQRES 8 B 163 LEU HIS ARG SER SER SER PHE GLY LYS ALA LYS ILE PHE SEQRES 9 B 163 PHE ASN ALA PRO ASP ALA GLU LYS GLY ILE GLY ASN LYS SEQRES 10 B 163 LYS GLY VAL VAL PHE PHE ASN LYS ILE THR ASN TYR ASP SEQRES 11 B 163 GLY GLY HIS ILE ASP LEU ILE GLU PRO GLU ASN SER LEU SEQRES 12 B 163 LEU THR CYS HIS SER HIS CYS TYR PHE ASN CYS LYS GLU SEQRES 13 B 163 VAL TRP PHE TRP GLU LEU SER HET SO4 B1164 5 HET SO4 B1165 5 HET SO4 A1164 5 HET SO4 A1165 5 HET SO4 A1166 5 HET K A1167 1 HET K A1168 1 HET K B1166 1 HETNAM K POTASSIUM ION HETNAM SO4 SULFATE ION FORMUL 2 SO4 5(O4 S 2-) FORMUL 3 K 3(K 1+) FORMUL 4 HOH *300(H2 O) HELIX 1 1 LEU A 4 SER A 11 1 8 HELIX 2 2 ALA A 24 ILE A 32 1 9 HELIX 3 3 GLU A 35 ASN A 43 1 9 HELIX 4 4 PRO A 44 ASN A 48 5 5 HELIX 5 5 THR A 49 THR A 61 1 13 HELIX 6 6 GLY A 84 SER A 95 1 12 HELIX 7 7 ASN A 106 GLY A 115 1 10 HELIX 8 8 LEU B 4 SER B 11 1 8 HELIX 9 9 ALA B 24 ILE B 32 1 9 HELIX 10 10 GLU B 35 ASN B 43 1 9 HELIX 11 11 PRO B 44 ASN B 48 5 5 HELIX 12 12 THR B 49 THR B 61 1 13 HELIX 13 13 GLY B 84 ARG B 94 1 11 HELIX 14 14 ASN B 106 GLY B 115 1 10 SHEET 1 AA 2 LEU A 69 PRO A 70 0 SHEET 2 AA 2 THR A 80 ILE A 81 -1 O ILE A 81 N LEU A 69 SHEET 1 AB 5 LYS A 102 PHE A 104 0 SHEET 2 AB 5 CYS A 154 GLU A 161 -1 O VAL A 157 N PHE A 104 SHEET 3 AB 5 GLY A 119 ILE A 126 -1 O VAL A 120 N TRP A 160 SHEET 4 AB 5 HIS A 133 GLU A 140 -1 O HIS A 133 N PHE A 123 SHEET 5 AB 5 LEU A 143 CYS A 146 -1 O LEU A 143 N GLU A 140 SHEET 1 BA 2 LEU B 69 PRO B 70 0 SHEET 2 BA 2 THR B 80 ILE B 81 -1 N ILE B 81 O LEU B 69 SHEET 1 BB 5 LYS B 102 PHE B 104 0 SHEET 2 BB 5 CYS B 154 GLU B 161 -1 O VAL B 157 N PHE B 104 SHEET 3 BB 5 GLY B 119 ILE B 126 -1 O VAL B 120 N TRP B 160 SHEET 4 BB 5 HIS B 133 GLU B 140 -1 O HIS B 133 N PHE B 123 SHEET 5 BB 5 LEU B 143 CYS B 146 -1 O LEU B 143 N GLU B 140 SSBOND 1 CYS A 146 CYS A 150 1555 1555 2.06 SSBOND 2 CYS B 146 CYS B 150 1555 1555 2.05 LINK K K A1167 OG SER A 15 1555 1555 3.21 LINK K K A1167 O HOH A2138 1555 1555 3.09 LINK K K A1168 OG SER A 15 1555 1555 3.46 LINK K K B1166 O HOH A2045 1555 1655 2.72 LINK K K B1166 O THR B 80 1555 1555 2.78 LINK K K B1166 O HOH A2046 1555 1655 2.62 LINK K K B1166 OG1 THR B 80 1555 1555 2.97 LINK K K B1166 O PHE B 65 1555 1555 2.64 SITE 1 AC1 7 LYS B 125 ASP B 130 GLY B 131 GLY B 132 SITE 2 AC1 7 HOH B2119 HOH B2123 HOH B2148 SITE 1 AC2 8 ASN A 153 HOH A2140 HOH A2141 HOH A2143 SITE 2 AC2 8 HOH A2146 LYS B 9 SER B 10 HOH B2007 SITE 1 AC3 9 LYS A 125 ASP A 130 GLY A 131 GLY A 132 SITE 2 AC3 9 HOH A2117 HOH A2121 HOH A2122 HOH A2130 SITE 3 AC3 9 HOH A2150 SITE 1 AC4 2 ARG A 6 HOH A2151 SITE 1 AC5 9 LYS A 41 HOH A2062 TYR B 22 ALA B 24 SITE 2 AC5 9 ALA B 25 ARG B 53 LYS B 66 HOH B2026 SITE 3 AC5 9 HOH B2068 SITE 1 AC6 2 SER A 15 HOH A2138 SITE 1 AC7 2 SER A 15 SER A 148 SITE 1 AC8 4 HOH A2045 HOH A2046 PHE B 65 THR B 80 CRYST1 56.828 65.260 97.504 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017597 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015323 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010256 0.00000