HEADER OXIDOREDUCTASE 03-MAY-13 4BLN TITLE CRYSTAL STRUCTURE OF FUNGAL VERSATILE PEROXIDASE I FROM PLEUROTUS TITLE 2 OSTREATUS - CRYSTAL FORM III COMPND MOL_ID: 1; COMPND 2 MOLECULE: VERSATILE PEROXIDASE I; COMPND 3 CHAIN: A; COMPND 4 EC: 1.11.1.16; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PLEUROTUS OSTREATUS; SOURCE 3 ORGANISM_COMMON: OYSTER MUSHROOM; SOURCE 4 ORGANISM_TAXID: 5322; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 316407; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: K-12; SOURCE 8 EXPRESSION_SYSTEM_VARIANT: W3110 KEYWDS OXIDOREDUCTASE, CLASS II FUNGAL PEROXIDASES EXPDTA X-RAY DIFFRACTION AUTHOR F.J.MEDRANO,A.ROMERO REVDAT 3 09-OCT-24 4BLN 1 REMARK REVDAT 2 20-DEC-23 4BLN 1 JRNL REMARK LINK REVDAT 1 15-JAN-14 4BLN 0 JRNL AUTH E.FERNANDEZ-FUEYO,F.J.RUIZ-DUENAS,M.J.MARTINEZ,A.ROMERO, JRNL AUTH 2 K.E.HAMMEL,F.J.MEDRANO,A.T.MARTINEZ JRNL TITL LIGNINOLYTIC PEROXIDASE GENES IN THE OYSTER MUSHROOM GENOME: JRNL TITL 2 HETEROLOGOUS EXPRESSION, MOLECULAR STRUCTURE, CATALYTIC AND JRNL TITL 3 STABILITY PROPERTIES, AND LIGNIN-DEGRADING ABILITY. JRNL REF BIOTECHNOL.BIOFUELS V. 7 2 2014 JRNL REFN ESSN 1754-6834 JRNL PMID 24387130 JRNL DOI 10.1186/1754-6834-7-2 REMARK 2 REMARK 2 RESOLUTION. 1.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.30 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 120784 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.192 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6023 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.3401 - 3.5704 1.00 4021 203 0.1582 0.1762 REMARK 3 2 3.5704 - 2.8340 1.00 3906 204 0.1658 0.2007 REMARK 3 3 2.8340 - 2.4758 1.00 3890 206 0.1666 0.1903 REMARK 3 4 2.4758 - 2.2494 1.00 3847 201 0.1614 0.1644 REMARK 3 5 2.2494 - 2.0882 1.00 3876 203 0.1654 0.1723 REMARK 3 6 2.0882 - 1.9651 1.00 3844 203 0.1650 0.1839 REMARK 3 7 1.9651 - 1.8667 1.00 3859 201 0.1577 0.1971 REMARK 3 8 1.8667 - 1.7854 1.00 3818 201 0.1524 0.1729 REMARK 3 9 1.7854 - 1.7167 1.00 3838 200 0.1538 0.1821 REMARK 3 10 1.7167 - 1.6574 1.00 3840 201 0.1485 0.1922 REMARK 3 11 1.6574 - 1.6056 1.00 3807 199 0.1510 0.1971 REMARK 3 12 1.6056 - 1.5597 1.00 3866 201 0.1462 0.1858 REMARK 3 13 1.5597 - 1.5186 1.00 3832 197 0.1448 0.1629 REMARK 3 14 1.5186 - 1.4816 1.00 3805 199 0.1468 0.1759 REMARK 3 15 1.4816 - 1.4479 1.00 3876 202 0.1480 0.1854 REMARK 3 16 1.4479 - 1.4171 1.00 3751 202 0.1495 0.1771 REMARK 3 17 1.4171 - 1.3887 1.00 3844 204 0.1525 0.1781 REMARK 3 18 1.3887 - 1.3625 1.00 3838 202 0.1653 0.2097 REMARK 3 19 1.3625 - 1.3382 1.00 3805 199 0.1628 0.2103 REMARK 3 20 1.3382 - 1.3155 1.00 3807 202 0.1719 0.2029 REMARK 3 21 1.3155 - 1.2943 1.00 3798 200 0.1772 0.2167 REMARK 3 22 1.2943 - 1.2744 1.00 3817 200 0.1770 0.1992 REMARK 3 23 1.2744 - 1.2556 1.00 3825 203 0.1789 0.1837 REMARK 3 24 1.2556 - 1.2380 1.00 3811 199 0.1981 0.2195 REMARK 3 25 1.2380 - 1.2212 1.00 3815 203 0.2109 0.2554 REMARK 3 26 1.2212 - 1.2054 1.00 3810 200 0.2155 0.2265 REMARK 3 27 1.2054 - 1.1903 1.00 3828 202 0.2275 0.2530 REMARK 3 28 1.1903 - 1.1759 1.00 3805 201 0.2474 0.3117 REMARK 3 29 1.1759 - 1.1623 1.00 3731 196 0.2737 0.2955 REMARK 3 30 1.1623 - 1.1492 0.92 3551 189 0.3825 0.4131 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.60 REMARK 3 K_SOL : 0.36 REMARK 3 B_SOL : 41.00 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.06 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.84520 REMARK 3 B22 (A**2) : 0.84520 REMARK 3 B33 (A**2) : -1.69040 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 2551 REMARK 3 ANGLE : 1.372 3494 REMARK 3 CHIRALITY : 0.076 386 REMARK 3 PLANARITY : 0.007 470 REMARK 3 DIHEDRAL : 13.826 905 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4BLN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 03-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1290056740. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 120788 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.150 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 200 DATA REDUNDANCY : 12.20 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 17.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.22 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.3 REMARK 200 DATA REDUNDANCY IN SHELL : 9.30 REMARK 200 R MERGE FOR SHELL (I) : 0.85000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: PDB ENTRY 3FMU REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.73 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 20 % PEG 3350 & 0.2 M AMMONIUM REMARK 280 CHLORIDE. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y,X,Z+3/4 REMARK 290 4555 Y,-X,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 19.18500 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 28.77750 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 9.59250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 331 REMARK 465 SER A 332 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2092 O HOH A 2146 1.89 REMARK 500 O HOH A 2113 O HOH A 2115 2.11 REMARK 500 O HOH A 2165 O HOH A 2344 2.11 REMARK 500 O HOH A 2129 O HOH A 2281 2.12 REMARK 500 O HOH A 2154 O HOH A 2155 2.14 REMARK 500 O PRO A 213 O HOH A 2310 2.15 REMARK 500 O HOH A 2273 O HOH A 2422 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 207 -36.36 -130.97 REMARK 500 THR A 324 -166.84 -122.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2015 DISTANCE = 6.70 ANGSTROMS REMARK 525 HOH A2038 DISTANCE = 7.03 ANGSTROMS REMARK 525 HOH A2185 DISTANCE = 6.19 ANGSTROMS REMARK 525 HOH A2195 DISTANCE = 6.98 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 401 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 49 O REMARK 620 2 ASP A 49 OD1 81.1 REMARK 620 3 GLY A 61 O 69.5 97.2 REMARK 620 4 ASP A 63 OD1 135.9 85.4 70.9 REMARK 620 5 SER A 65 OG 146.2 92.2 144.3 75.6 REMARK 620 6 HOH A2097 O 75.0 87.7 142.9 146.2 71.6 REMARK 620 7 HOH A2104 O 101.8 169.7 93.0 98.9 79.9 83.5 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 HEM A 500 FE REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 170 NE2 REMARK 620 2 HEM A 500 NA 102.1 REMARK 620 3 HEM A 500 NB 101.1 87.9 REMARK 620 4 HEM A 500 NC 99.7 158.2 88.6 REMARK 620 5 HEM A 500 ND 100.1 87.4 158.8 88.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 402 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER A 171 OG REMARK 620 2 SER A 171 O 72.3 REMARK 620 3 ASP A 188 OD1 116.2 79.1 REMARK 620 4 ASP A 188 OD2 75.6 93.2 50.2 REMARK 620 5 THR A 190 O 147.2 81.7 76.7 126.5 REMARK 620 6 THR A 190 OG1 140.3 146.8 78.6 91.1 69.5 REMARK 620 7 VAL A 193 O 82.0 85.9 150.8 156.8 76.4 102.3 REMARK 620 8 ASP A 195 OD1 69.0 140.4 125.9 85.2 129.9 72.7 80.9 REMARK 620 N 1 2 3 4 5 6 7 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEM A 500 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BLK RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FUNGAL VERSATILE PEROXIDASE I FROM PLEUROTUS REMARK 900 OSTREATUS - CRYSTAL FORM I REMARK 900 RELATED ID: 4BLL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FUNGAL VERSATILE PEROXIDASE I FROM PLEUROTUS REMARK 900 OSTREATUS - CRYSTAL FORM II REMARK 900 RELATED ID: 4BLX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FUNGAL VERSATILE PEROXIDASE I FROM PLEUROTUS REMARK 900 OSTREATUS - CRYSTAL FORM IV REMARK 900 RELATED ID: 4BLY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FUNGAL VERSATILE PEROXIDASE I FROM PLEUROTUS REMARK 900 OSTREATUS - CRYSTAL FORM V REMARK 900 RELATED ID: 4BLZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FUNGAL VERSATILE PEROXIDASE I FROM PLEUROTUS REMARK 900 OSTREATUS - CRYSTAL FORM VI REMARK 900 RELATED ID: 4BM0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF FUNGAL VERSATILE PEROXIDASE I FROM PLEUROTUS REMARK 900 OSTREATUS - CRYSTAL FORM VII REMARK 900 RELATED ID: 4BM1 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MANGANESE PEROXIDASE 4 FROM PLEUROTUS REMARK 900 OSTREATUS - CRYSTAL FORM I REMARK 900 RELATED ID: 4BM2 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MANGANESE PEROXIDASE 4 FROM PLEUROTUS REMARK 900 OSTREATUS - CRYSTAL FORM II REMARK 900 RELATED ID: 4BM3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MANGANESE PEROXIDASE 4 FROM PLEUROTUS REMARK 900 OSTREATUS - CRYSTAL FORM III REMARK 900 RELATED ID: 4BM4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MANGANESE PEROXIDASE 4 FROM PLEUROTUS REMARK 900 OSTREATUS - CRYSTAL FORM IV DBREF 4BLN A 1 332 PDB 4BLN 4BLN 1 332 SEQRES 1 A 332 MET ALA THR CYS ALA ASP GLY ARG THR THR ALA ASN ALA SEQRES 2 A 332 ALA CYS CYS VAL LEU PHE PRO ILE LEU ASP ASP ILE GLN SEQRES 3 A 332 GLU ASN LEU PHE ASP GLY ALA GLN CYS GLY GLU GLU VAL SEQRES 4 A 332 HIS GLU SER LEU ARG LEU THR PHE HIS ASP ALA ILE GLY SEQRES 5 A 332 PHE SER PRO THR LEU GLY GLY GLY GLY ALA ASP GLY SER SEQRES 6 A 332 ILE ILE THR PHE ASP THR ILE GLU THR ASN PHE PRO ALA SEQRES 7 A 332 ASN ALA GLY ILE ASP GLU ILE VAL SER ALA GLN LYS PRO SEQRES 8 A 332 PHE VAL ALA LYS HIS ASN ILE SER ALA GLY ASP PHE ILE SEQRES 9 A 332 GLN PHE ALA GLY ALA VAL GLY VAL SER ASN CYS PRO GLY SEQRES 10 A 332 GLY VAL ARG ILE PRO PHE PHE LEU GLY ARG PRO ASP ALA SEQRES 11 A 332 VAL ALA ALA SER PRO ASP HIS LEU VAL PRO GLU PRO PHE SEQRES 12 A 332 ASP SER VAL ASP THR ILE LEU ALA ARG MET GLY ASP ALA SEQRES 13 A 332 GLY PHE SER ALA VAL GLU VAL VAL TRP LEU LEU ALA SER SEQRES 14 A 332 HIS SER ILE ALA ALA ALA ASP LYS VAL ASP PRO SER ILE SEQRES 15 A 332 PRO GLY THR PRO PHE ASP SER THR PRO GLY VAL PHE ASP SEQRES 16 A 332 SER GLN PHE PHE ILE GLU THR GLN LEU LYS GLY ARG LEU SEQRES 17 A 332 PHE PRO GLY THR PRO ASP ASN LYS GLY GLU VAL GLN SER SEQRES 18 A 332 PRO LEU GLN GLY GLU ILE ARG LEU GLN SER ASP HIS LEU SEQRES 19 A 332 LEU ALA ARG ASP PRO GLN THR ALA CYS GLU TRP GLN SER SEQRES 20 A 332 MET VAL ASN ASN GLN PRO LYS ILE GLN ASN ARG PHE ALA SEQRES 21 A 332 GLY THR MET SER LYS MET ALA LEU LEU GLY GLN ASP LYS SEQRES 22 A 332 SER LYS LEU ILE ASP CYS SER ASP ILE ILE PRO THR PRO SEQRES 23 A 332 PRO ALA LEU VAL GLY ALA ALA HIS LEU PRO ALA GLY PHE SEQRES 24 A 332 SER LEU SER ASP VAL GLU GLN ALA CYS ALA GLU THR PRO SEQRES 25 A 332 PHE PRO ALA LEU THR ALA ASP PRO GLY PRO VAL THR SER SEQRES 26 A 332 VAL PRO PRO VAL PRO GLY SER HET CA A 401 1 HET CA A 402 1 HET HEM A 500 73 HETNAM CA CALCIUM ION HETNAM HEM PROTOPORPHYRIN IX CONTAINING FE HETSYN HEM HEME FORMUL 2 CA 2(CA 2+) FORMUL 4 HEM C34 H32 FE N4 O4 FORMUL 5 HOH *423(H2 O) HELIX 1 1 ASN A 12 CYS A 16 5 5 HELIX 2 2 VAL A 17 LEU A 29 1 13 HELIX 3 3 GLY A 36 ILE A 51 1 16 HELIX 4 4 GLY A 64 PHE A 69 1 6 HELIX 5 5 PHE A 69 THR A 74 1 6 HELIX 6 6 ASN A 75 ALA A 80 5 6 HELIX 7 7 ILE A 82 HIS A 96 1 15 HELIX 8 8 SER A 99 ASN A 114 1 16 HELIX 9 9 SER A 145 GLY A 157 1 13 HELIX 10 10 SER A 159 LEU A 167 1 9 HELIX 11 11 ALA A 168 ILE A 172 5 5 HELIX 12 12 SER A 196 THR A 202 1 7 HELIX 13 13 GLN A 230 ALA A 236 1 7 HELIX 14 14 THR A 241 MET A 248 1 8 HELIX 15 15 ASN A 251 LEU A 268 1 18 HELIX 16 16 ASP A 272 LEU A 276 5 5 HELIX 17 17 SER A 280 ILE A 283 5 4 HELIX 18 18 SER A 300 ASP A 303 5 4 SHEET 1 AA 2 PHE A 124 LEU A 125 0 SHEET 2 AA 2 ILE A 277 ASP A 278 -1 O ILE A 277 N LEU A 125 SHEET 1 AB 2 ALA A 174 ALA A 175 0 SHEET 2 AB 2 THR A 185 PRO A 186 -1 O THR A 185 N ALA A 175 SHEET 1 AC 2 GLU A 218 VAL A 219 0 SHEET 2 AC 2 ARG A 228 LEU A 229 -1 O ARG A 228 N VAL A 219 SSBOND 1 CYS A 4 CYS A 16 1555 1555 2.04 SSBOND 2 CYS A 15 CYS A 279 1555 1555 2.03 SSBOND 3 CYS A 35 CYS A 115 1555 1555 2.03 SSBOND 4 CYS A 243 CYS A 308 1555 1555 2.05 LINK O ASP A 49 CA CA A 401 1555 1555 2.54 LINK OD1 ASP A 49 CA CA A 401 1555 1555 2.35 LINK O GLY A 61 CA CA A 401 1555 1555 2.48 LINK OD1 ASP A 63 CA CA A 401 1555 1555 2.48 LINK OG SER A 65 CA CA A 401 1555 1555 2.45 LINK NE2 HIS A 170 FE HEM A 500 1555 1555 2.10 LINK OG SER A 171 CA CA A 402 1555 1555 2.55 LINK O SER A 171 CA CA A 402 1555 1555 2.40 LINK OD1 ASP A 188 CA CA A 402 1555 1555 2.69 LINK OD2 ASP A 188 CA CA A 402 1555 1555 2.46 LINK O THR A 190 CA CA A 402 1555 1555 2.39 LINK OG1 THR A 190 CA CA A 402 1555 1555 2.48 LINK O VAL A 193 CA CA A 402 1555 1555 2.45 LINK OD1 ASP A 195 CA CA A 402 1555 1555 2.46 LINK CA CA A 401 O HOH A2097 1555 1555 2.53 LINK CA CA A 401 O HOH A2104 1555 1555 2.40 SITE 1 AC1 6 ASP A 49 GLY A 61 ASP A 63 SER A 65 SITE 2 AC1 6 HOH A2097 HOH A2104 SITE 1 AC2 5 SER A 171 ASP A 188 THR A 190 VAL A 193 SITE 2 AC2 5 ASP A 195 SITE 1 AC3 26 HIS A 40 GLU A 41 LEU A 43 ARG A 44 SITE 2 AC3 26 PHE A 47 GLU A 141 PRO A 142 LEU A 166 SITE 3 AC3 26 LEU A 167 SER A 169 HIS A 170 ALA A 173 SITE 4 AC3 26 ALA A 174 ALA A 175 ASP A 176 LYS A 177 SITE 5 AC3 26 VAL A 178 PHE A 187 LEU A 229 SER A 231 SITE 6 AC3 26 HOH A2080 HOH A2084 HOH A2091 HOH A2154 SITE 7 AC3 26 HOH A2269 HOH A2423 CRYST1 94.600 94.600 38.370 90.00 90.00 90.00 P 43 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010571 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010571 0.000000 0.00000 SCALE3 0.000000 0.000000 0.026062 0.00000