HEADER OXIDOREDUCTASE 13-MAY-13 4BN6 TITLE NITROREDUCTASE CIND FROM LACTOCOCCUS LACTIS IN COMPLEX WITH TITLE 2 CHLORAMPHENICOL COMPND MOL_ID: 1; COMPND 2 MOLECULE: COPPER INDUCED NITROREDUCTASE D; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOCOCCUS LACTIS; SOURCE 3 ORGANISM_TAXID: 272623; SOURCE 4 STRAIN: IL1403; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI DH5[ALPHA]; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 668369 KEYWDS OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.E.OBERHOLZER,R.BAUMGARTNER,S.WALTERSPERGER REVDAT 2 20-DEC-23 4BN6 1 REMARK ATOM REVDAT 1 28-MAY-14 4BN6 0 JRNL AUTH A.E.OBERHOLZER,R.BAUMGARTNER,S.WALTERSPERGER JRNL TITL NITROREDUCTASE CIND FROM LACTOCOCCUS LACTIS IN COMPLEX WITH JRNL TITL 2 CHLORAMPHENICOL JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.46 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.46 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.90 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 2.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 38846 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.175 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1943 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 29.9100 - 3.5218 0.98 2784 148 0.1525 0.1747 REMARK 3 2 3.5218 - 2.7960 0.99 2716 143 0.1433 0.1529 REMARK 3 3 2.7960 - 2.4428 0.99 2681 141 0.1386 0.1648 REMARK 3 4 2.4428 - 2.2195 0.99 2671 139 0.1298 0.1558 REMARK 3 5 2.2195 - 2.0604 0.99 2661 140 0.1256 0.1411 REMARK 3 6 2.0604 - 1.9390 1.00 2649 140 0.1424 0.1713 REMARK 3 7 1.9390 - 1.8419 0.99 2633 139 0.1430 0.1780 REMARK 3 8 1.8419 - 1.7617 0.98 2622 138 0.1542 0.1870 REMARK 3 9 1.7617 - 1.6939 0.99 2627 138 0.1596 0.1651 REMARK 3 10 1.6939 - 1.6355 0.98 2596 137 0.1751 0.2200 REMARK 3 11 1.6355 - 1.5843 0.98 2586 136 0.1879 0.2402 REMARK 3 12 1.5843 - 1.5390 0.98 2581 136 0.2117 0.2410 REMARK 3 13 1.5390 - 1.4985 0.98 2596 136 0.2273 0.2586 REMARK 3 14 1.4985 - 1.4620 0.94 2500 132 0.2608 0.2850 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.130 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.240 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 1584 REMARK 3 ANGLE : 0.943 2158 REMARK 3 CHIRALITY : 0.054 234 REMARK 3 PLANARITY : 0.006 277 REMARK 3 DIHEDRAL : 14.766 579 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 2 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.3618 -29.8624 13.9511 REMARK 3 T TENSOR REMARK 3 T11: 0.0895 T22: 0.0812 REMARK 3 T33: 0.1115 T12: 0.0247 REMARK 3 T13: -0.0238 T23: 0.0413 REMARK 3 L TENSOR REMARK 3 L11: 4.4272 L22: 1.3642 REMARK 3 L33: 2.5467 L12: -0.4326 REMARK 3 L13: -1.3862 L23: 1.6082 REMARK 3 S TENSOR REMARK 3 S11: -0.0676 S12: -0.2017 S13: -0.1504 REMARK 3 S21: -0.0002 S22: -0.0376 S23: -0.0223 REMARK 3 S31: 0.0594 S32: 0.2326 S33: 0.1311 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 23 THROUGH 35 ) REMARK 3 ORIGIN FOR THE GROUP (A): -25.1282 -29.1597 2.4758 REMARK 3 T TENSOR REMARK 3 T11: 0.1076 T22: 0.1395 REMARK 3 T33: 0.1116 T12: -0.0016 REMARK 3 T13: 0.0009 T23: -0.0400 REMARK 3 L TENSOR REMARK 3 L11: 3.2716 L22: 6.1983 REMARK 3 L33: 4.7209 L12: -2.5927 REMARK 3 L13: -2.5912 L23: -0.3005 REMARK 3 S TENSOR REMARK 3 S11: -0.0584 S12: 0.3895 S13: -0.5355 REMARK 3 S21: -0.3250 S22: -0.2161 S23: -0.0424 REMARK 3 S31: 0.3470 S32: -0.0174 S33: 0.1761 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 36 THROUGH 115 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.7817 -13.1026 4.0477 REMARK 3 T TENSOR REMARK 3 T11: 0.1501 T22: 0.0824 REMARK 3 T33: 0.1456 T12: -0.0262 REMARK 3 T13: -0.0229 T23: 0.0220 REMARK 3 L TENSOR REMARK 3 L11: 1.3373 L22: 2.0080 REMARK 3 L33: 1.8393 L12: -0.4591 REMARK 3 L13: -0.2712 L23: -0.4008 REMARK 3 S TENSOR REMARK 3 S11: 0.0082 S12: 0.1678 S13: 0.3497 REMARK 3 S21: -0.1229 S22: -0.0441 S23: -0.2329 REMARK 3 S31: -0.2544 S32: 0.0974 S33: 0.0105 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 116 THROUGH 202 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.2878 -16.1869 13.1640 REMARK 3 T TENSOR REMARK 3 T11: 0.0969 T22: 0.0637 REMARK 3 T33: 0.1187 T12: -0.0129 REMARK 3 T13: -0.0172 T23: 0.0066 REMARK 3 L TENSOR REMARK 3 L11: 1.0339 L22: 0.5080 REMARK 3 L33: 1.9875 L12: -0.0352 REMARK 3 L13: -0.2254 L23: 0.0431 REMARK 3 S TENSOR REMARK 3 S11: -0.0072 S12: 0.0268 S13: 0.1394 REMARK 3 S21: -0.0180 S22: -0.0056 S23: -0.0298 REMARK 3 S31: -0.2907 S32: 0.0244 S33: 0.0042 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4BN6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 13-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1290056820. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 38856 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.460 REMARK 200 RESOLUTION RANGE LOW (A) : 100.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.200 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 4.100 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 21.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.46 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.55 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.3 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.76000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2WQF REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.21 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.52 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -X,Y,-Z+1/2 REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 34.34450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 34.34450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 27.01000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 60.80250 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 27.01000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 60.80250 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 34.34450 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 27.01000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 60.80250 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 34.34450 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 27.01000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 60.80250 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8840 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -63.7 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -54.02000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 34.34450 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2004 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2078 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 75 REMARK 465 GLY A 76 REMARK 465 VAL A 77 REMARK 465 PRO A 78 REMARK 465 GLU A 79 REMARK 465 SER A 80 REMARK 465 ALA A 81 REMARK 465 TRP A 82 REMARK 465 ASP A 83 REMARK 465 ASN A 84 REMARK 465 THR A 85 REMARK 465 ARG A 86 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 MET A 72 CG SD CE REMARK 470 LYS A 202 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2022 O HOH A 2046 1.82 REMARK 500 O HOH A 2147 O HOH A 2148 2.04 REMARK 500 O HOH A 2116 O HOH A 2117 2.09 REMARK 500 O HOH A 2160 O HOH A 2168 2.11 REMARK 500 N SER A 2 O HOH A 2002 2.12 REMARK 500 O HOH A 2142 O HOH A 2143 2.17 REMARK 500 O HOH A 2040 O HOH A 2043 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2116 O HOH A 2220 4555 1.98 REMARK 500 O HOH A 2063 O HOH A 2092 8545 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2029 DISTANCE = 5.97 ANGSTROMS REMARK 525 HOH A2139 DISTANCE = 6.88 ANGSTROMS REMARK 525 HOH A2267 DISTANCE = 6.53 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CLM A 1203 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BN7 RELATED DB: PDB REMARK 900 NITROREDUCTASE CIND FROM LACTOCOCCUS LACTIS IN COMPLEX WITH 2,6- REMARK 900 DICHLOROPHENOLINDOPHENOL REMARK 900 RELATED ID: 4BN8 RELATED DB: PDB REMARK 900 NITROREDUCTASE CIND FROM LACTOCOCCUS LACTIS IN COMPLEX WITH 4- REMARK 900 NITROPHENOL REMARK 900 RELATED ID: 4BN9 RELATED DB: PDB REMARK 900 NITROREDUCTASE CIND FROM LACTOCOCCUS LACTIS IN COMPLEX WITH REMARK 900 NICOTINIC ACID REMARK 900 RELATED ID: 4BNB RELATED DB: PDB REMARK 900 NITROREDUCTASE CIND FROM LACTOCOCCUS LACTIS IN COMPLEX WITH 4- REMARK 900 NITROQUINOLINE 1-OXIDE DBREF 4BN6 A 2 202 UNP Q9CED0 Q9CED0_LACLA 2 202 SEQRES 1 A 201 SER PHE ILE LYS SER LEU GLU ASN ARG ARG THR ILE TYR SEQRES 2 A 201 ALA LEU GLY ARG ASN VAL GLN ASP GLU GLU LYS VAL ILE SEQRES 3 A 201 GLU THR ILE LYS GLU ALA VAL ARG PHE SER PRO THR ALA SEQRES 4 A 201 PHE ASN SER GLN THR GLY ARG LEU LEU ILE LEU THR GLY SEQRES 5 A 201 ASP ALA GLN ASP LYS LEU TRP ASP GLU ILE VAL ALA PRO SEQRES 6 A 201 GLU LEU LYS ALA ALA MET GLU ALA GLN GLY VAL PRO GLU SEQRES 7 A 201 SER ALA TRP ASP ASN THR ARG ALA LYS LEU ASP GLY PHE SEQRES 8 A 201 LYS ALA ALA PHE GLY THR ILE LEU PHE PHE GLU ASP GLN SEQRES 9 A 201 ALA VAL VAL LYS ASN LEU GLN GLU GLN PHE ALA LEU TYR SEQRES 10 A 201 ALA ASP ASN PHE PRO VAL TRP SER GLU GLN GLY SER GLY SEQRES 11 A 201 ILE ILE SER VAL ASN VAL TRP THR ALA LEU ALA GLU LEU SEQRES 12 A 201 GLY LEU GLY ALA ASN LEU GLN HIS TYR ASN PRO LEU ILE SEQRES 13 A 201 ASP GLU ALA VAL ALA LYS GLU TRP ASN LEU PRO GLU SER SEQRES 14 A 201 TRP LYS LEU ARG GLY GLN LEU VAL PHE GLY SER ILE GLU SEQRES 15 A 201 ALA PRO ALA GLY GLU LYS THR PHE MET ASP ASP ALA ASP SEQRES 16 A 201 ARG PHE ILE VAL ALA LYS HET FMN A 504 50 HET CLM A1203 32 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM CLM CHLORAMPHENICOL HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 2 FMN C17 H21 N4 O9 P FORMUL 3 CLM C11 H12 CL2 N2 O5 FORMUL 4 HOH *267(H2 O) HELIX 1 1 SER A 2 ARG A 10 1 9 HELIX 2 2 ASP A 22 PHE A 36 1 15 HELIX 3 3 THR A 39 SER A 43 5 5 HELIX 4 4 GLY A 53 ILE A 63 1 11 HELIX 5 5 ILE A 63 ALA A 74 1 12 HELIX 6 6 ALA A 87 ALA A 94 1 8 HELIX 7 7 GLN A 105 PHE A 115 1 11 HELIX 8 8 ALA A 116 ALA A 119 5 4 HELIX 9 9 ASP A 120 LEU A 144 1 25 HELIX 10 10 ILE A 157 TRP A 165 1 9 HELIX 11 11 ASP A 193 ARG A 197 5 5 SHEET 1 AA 2 LEU A 16 GLY A 17 0 SHEET 2 AA 2 TRP A 171 ILE A 182 -1 O SER A 181 N GLY A 17 SHEET 1 AB 4 GLY A 46 THR A 52 0 SHEET 2 AB 4 GLY A 97 ASP A 104 -1 O THR A 98 N LEU A 51 SHEET 3 AB 4 TRP A 171 ILE A 182 -1 O LYS A 172 N GLU A 103 SHEET 4 AB 4 LEU A 146 GLN A 151 1 O GLY A 147 N GLY A 180 SHEET 1 AC 4 GLY A 46 THR A 52 0 SHEET 2 AC 4 GLY A 97 ASP A 104 -1 O THR A 98 N LEU A 51 SHEET 3 AC 4 TRP A 171 ILE A 182 -1 O LYS A 172 N GLU A 103 SHEET 4 AC 4 LEU A 16 GLY A 17 -1 O GLY A 17 N SER A 181 SHEET 1 AD 2 LEU A 146 GLN A 151 0 SHEET 2 AD 2 TRP A 171 ILE A 182 1 O GLN A 176 N GLN A 151 CISPEP 1 ASN A 154 PRO A 155 0 1.98 SITE 1 AC1 20 ARG A 10 ARG A 11 THR A 12 TYR A 14 SITE 2 AC1 20 PRO A 38 THR A 39 ALA A 40 PHE A 41 SITE 3 AC1 20 ASN A 42 GLN A 128 LEU A 150 GLN A 151 SITE 4 AC1 20 HIS A 152 LYS A 189 CLM A1203 HOH A2047 SITE 5 AC1 20 HOH A2052 HOH A2057 HOH A2155 HOH A2265 SITE 1 AC2 8 ALA A 40 PHE A 41 PHE A 115 TYR A 118 SITE 2 AC2 8 TRP A 125 FMN A 504 HOH A2188 HOH A2266 CRYST1 54.020 121.605 68.689 90.00 90.00 90.00 C 2 2 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.018512 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008223 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014558 0.00000