HEADER TRANSFERASE 24-MAY-13 4BPD TITLE STRUCTURE DETERMINATION OF AN INTEGRAL MEMBRANE KINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: DIACYLGLYCEROL KINASE; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 SYNONYM: DIACYLGLYCEROL KINASE - DELTA 7, DAGK, DIGLYCERIDE KINASE, COMPND 5 DGK; COMPND 6 EC: 2.7.1.107; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K-12; SOURCE 5 ATCC: 29425; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: A19; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET22B; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET22B-DGKA-DELTA7; SOURCE 12 OTHER_DETAILS: ESCHERICHIA COLI A19 KEYWDS TRANSFERASE, CELL-FREE, DGKA, IN MESO CRYSTALLIZATION, IN VITRO KEYWDS 2 EXPRESSION, LIPID METABOLISM, LIPIDIC MESOPHASE, LIPIDIC CUBIC KEYWDS 3 PHASE, LCP, MEMBRANE PROTEIN, MICROCRYSTAL, 7.8 MAG, THERMOSTABLE KEYWDS 4 MUTANT EXPDTA X-RAY DIFFRACTION AUTHOR D.LI,C.BOLAND,M.CAFFREY REVDAT 6 20-DEC-23 4BPD 1 REMARK LINK REVDAT 5 03-APR-19 4BPD 1 REMARK REVDAT 4 06-MAR-19 4BPD 1 REMARK REVDAT 3 03-DEC-14 4BPD 1 JRNL REVDAT 2 22-OCT-14 4BPD 1 JRNL REVDAT 1 07-MAY-14 4BPD 0 JRNL AUTH C.BOLAND,D.LI,S.T.A.SHAH,S.HABERSTOCK,V.DOTSCH,F.BERNHARD, JRNL AUTH 2 M.CAFFREY JRNL TITL CELL-FREE EXPRESSION AND IN MESO CRYSTALLISATION OF AN JRNL TITL 2 INTEGRAL MEMBRANE KINASE FOR STRUCTURE DETERMINATION. JRNL REF CELL.MOL.LIFE SCI. V. 71 4895 2014 JRNL REFN ISSN 1420-682X JRNL PMID 25012698 JRNL DOI 10.1007/S00018-014-1655-7 REMARK 2 REMARK 2 RESOLUTION. 3.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 3.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 57.04 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 15102 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.243 REMARK 3 R VALUE (WORKING SET) : 0.241 REMARK 3 FREE R VALUE : 0.282 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 752 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 57.0438 - 5.6423 0.98 3096 162 0.2329 0.2569 REMARK 3 2 5.6423 - 4.4790 0.99 2991 142 0.2302 0.2889 REMARK 3 3 4.4790 - 3.9130 0.98 2890 159 0.1982 0.2404 REMARK 3 4 3.9130 - 3.5553 0.84 2459 142 0.3294 0.3696 REMARK 3 5 3.5553 - 3.3005 0.99 2914 147 0.2889 0.3385 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.490 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 33.750 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 95.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 75.01 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.001 4711 REMARK 3 ANGLE : 0.357 6410 REMARK 3 CHIRALITY : 0.025 814 REMARK 3 PLANARITY : 0.001 765 REMARK 3 DIHEDRAL : 9.556 1620 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THERE ARE SIX NCS-RELATED MOLECULES IN REMARK 3 THE ASYMMETRIC UNIT BUT NCS RESTRAINTS WERE NOT USED IN THE REMARK 3 REFINEMENT. REMARK 4 REMARK 4 4BPD COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 24-MAY-13. REMARK 100 THE DEPOSITION ID IS D_1290057002. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-SEP-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03319 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15336 REMARK 200 RESOLUTION RANGE HIGH (A) : 3.300 REMARK 200 RESOLUTION RANGE LOW (A) : 78.380 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.1 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 10.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 3.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.0 REMARK 200 DATA REDUNDANCY IN SHELL : 4.40 REMARK 200 R MERGE FOR SHELL (I) : 0.91000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3ZE3 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 68.56 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.91 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3-5 %(V/V) 2-METHYL-2, 4-PENTANEDIOL REMARK 280 (MPD), 0.1 M SODIUM CHLORIDE, 0.06 M MAGNESIUM ACETATE, 0.1 M REMARK 280 SODIUM CITRATE/HCL PH 5.6. CRYSTALLIZED USING THE IN MESO REMARK 280 (LIPIDIC CUBIC PHASE, LCP) METHOD AT 4 DEGREES CELCIUS WITH THE REMARK 280 7.8 MONOACYLGLYCEROL (7.8 MAG) AS THE HOSTING LIPID., REMARK 280 TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 37.43500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 72.01000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 46.71500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 72.01000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 37.43500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 46.71500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7540 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -81.1 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7180 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -111.5 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: D, E, F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -8 REMARK 465 HIS A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 GLU A -1 REMARK 465 LEU A 0 REMARK 465 ALA A 1 REMARK 465 ASN A 2 REMARK 465 ASN A 3 REMARK 465 GLY B -8 REMARK 465 HIS B -7 REMARK 465 HIS B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 GLU B -1 REMARK 465 LEU B 0 REMARK 465 ALA B 1 REMARK 465 ASN B 2 REMARK 465 ASN B 3 REMARK 465 THR B 4 REMARK 465 THR B 5 REMARK 465 GLY B 6 REMARK 465 PHE B 7 REMARK 465 THR B 8 REMARK 465 ARG B 9 REMARK 465 ILE B 10 REMARK 465 ILE B 11 REMARK 465 LYS B 12 REMARK 465 ALA B 13 REMARK 465 ALA B 14 REMARK 465 GLY B 15 REMARK 465 TYR B 16 REMARK 465 SER B 17 REMARK 465 TRP B 18 REMARK 465 LYS B 19 REMARK 465 GLY B 20 REMARK 465 LEU B 21 REMARK 465 ARG B 22 REMARK 465 GLY C -8 REMARK 465 HIS C -7 REMARK 465 HIS C -6 REMARK 465 HIS C -5 REMARK 465 HIS C -4 REMARK 465 HIS C -3 REMARK 465 HIS C -2 REMARK 465 GLU C -1 REMARK 465 LEU C 0 REMARK 465 ALA C 1 REMARK 465 ASN C 2 REMARK 465 ASN C 3 REMARK 465 THR C 4 REMARK 465 THR C 5 REMARK 465 GLY C 6 REMARK 465 PHE C 7 REMARK 465 THR C 8 REMARK 465 ARG C 9 REMARK 465 ILE C 10 REMARK 465 ILE C 11 REMARK 465 LYS C 12 REMARK 465 ALA C 13 REMARK 465 ALA C 14 REMARK 465 GLY C 15 REMARK 465 TYR C 16 REMARK 465 SER C 17 REMARK 465 TRP C 18 REMARK 465 LYS C 19 REMARK 465 GLY C 20 REMARK 465 LEU C 21 REMARK 465 ARG C 22 REMARK 465 ALA C 23 REMARK 465 ALA C 24 REMARK 465 TRP C 25 REMARK 465 ILE C 26 REMARK 465 ASN C 27 REMARK 465 GLU C 28 REMARK 465 GLY D -8 REMARK 465 HIS D -7 REMARK 465 HIS D -6 REMARK 465 HIS D -5 REMARK 465 HIS D -4 REMARK 465 HIS D -3 REMARK 465 HIS D -2 REMARK 465 GLU D -1 REMARK 465 LEU D 0 REMARK 465 ALA D 1 REMARK 465 ASN D 2 REMARK 465 ASN D 3 REMARK 465 THR D 4 REMARK 465 THR D 5 REMARK 465 GLY D 6 REMARK 465 PHE D 7 REMARK 465 THR D 8 REMARK 465 ARG D 9 REMARK 465 ILE D 10 REMARK 465 ILE D 11 REMARK 465 LYS D 12 REMARK 465 ALA D 13 REMARK 465 GLY E -8 REMARK 465 HIS E -7 REMARK 465 HIS E -6 REMARK 465 HIS E -5 REMARK 465 HIS E -4 REMARK 465 HIS E -3 REMARK 465 HIS E -2 REMARK 465 GLU E -1 REMARK 465 LEU E 0 REMARK 465 ALA E 1 REMARK 465 ASN E 2 REMARK 465 ASN E 3 REMARK 465 THR E 4 REMARK 465 THR E 5 REMARK 465 GLY E 6 REMARK 465 PHE E 7 REMARK 465 THR E 8 REMARK 465 ARG E 9 REMARK 465 ILE E 10 REMARK 465 ILE E 11 REMARK 465 LYS E 12 REMARK 465 ALA E 13 REMARK 465 ALA E 14 REMARK 465 GLY E 15 REMARK 465 TYR E 16 REMARK 465 SER E 17 REMARK 465 TRP E 18 REMARK 465 LYS E 19 REMARK 465 GLY E 20 REMARK 465 LEU E 21 REMARK 465 ARG E 22 REMARK 465 ALA E 23 REMARK 465 ALA E 24 REMARK 465 TRP E 25 REMARK 465 ILE E 26 REMARK 465 ASN E 27 REMARK 465 GLU E 28 REMARK 465 ALA E 29 REMARK 465 ALA E 30 REMARK 465 PHE E 31 REMARK 465 GLY E 121 REMARK 465 GLY F -8 REMARK 465 HIS F -7 REMARK 465 HIS F -6 REMARK 465 HIS F -5 REMARK 465 HIS F -4 REMARK 465 HIS F -3 REMARK 465 HIS F -2 REMARK 465 GLU F -1 REMARK 465 LEU F 0 REMARK 465 ALA F 1 REMARK 465 ASN F 2 REMARK 465 ASN F 3 REMARK 465 THR F 4 REMARK 465 THR F 5 REMARK 465 GLY F 6 REMARK 465 PHE F 7 REMARK 465 THR F 8 REMARK 465 ARG F 9 REMARK 465 ILE F 10 REMARK 465 ILE F 11 REMARK 465 LYS F 12 REMARK 465 ALA F 13 REMARK 465 ALA F 14 REMARK 465 GLY F 15 REMARK 465 TYR F 16 REMARK 465 SER F 17 REMARK 465 TRP F 18 REMARK 465 LYS F 19 REMARK 465 GLY F 20 REMARK 465 LEU F 21 REMARK 465 ARG F 22 REMARK 465 ALA F 23 REMARK 465 ALA F 24 REMARK 465 TRP F 25 REMARK 465 ILE F 26 REMARK 465 ASN F 27 REMARK 465 GLU F 28 REMARK 465 GLY F 121 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN D1122 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU D 28 OE2 REMARK 620 2 GLU D 28 OE1 66.4 REMARK 620 3 GLU D 76 OE1 128.9 152.4 REMARK 620 4 GLU D 76 OE2 85.7 141.2 66.4 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN D 1122 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78M A 1122 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78M D 1123 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78M B 1122 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 78M A 1123 REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE CONSTRUCT CONTAINS AN N-TERMIANL HIS TAG 'GHHHHHHEL'. REMARK 999 COMPARED TO THE WILDTYPE FORM, THE PROTEIN HAS SEVEN REMARK 999 MUTATIONS. THEY ARE A41C, C46A, I53V, I70L, M96L, V107D REMARK 999 AND C113A. DBREF 4BPD A 1 121 UNP P0ABN1 KDGL_ECOLI 2 122 DBREF 4BPD B 1 121 UNP P0ABN1 KDGL_ECOLI 2 122 DBREF 4BPD C 1 121 UNP P0ABN1 KDGL_ECOLI 2 122 DBREF 4BPD D 1 121 UNP P0ABN1 KDGL_ECOLI 2 122 DBREF 4BPD E 1 121 UNP P0ABN1 KDGL_ECOLI 2 122 DBREF 4BPD F 1 121 UNP P0ABN1 KDGL_ECOLI 2 122 SEQADV 4BPD GLY A -8 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS A -7 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS A -6 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS A -5 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS A -4 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS A -3 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS A -2 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD GLU A -1 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD LEU A 0 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD CYS A 41 UNP P0ABN1 ALA 42 ENGINEERED MUTATION SEQADV 4BPD ALA A 46 UNP P0ABN1 CYS 47 ENGINEERED MUTATION SEQADV 4BPD VAL A 53 UNP P0ABN1 ILE 54 ENGINEERED MUTATION SEQADV 4BPD LEU A 70 UNP P0ABN1 ILE 71 ENGINEERED MUTATION SEQADV 4BPD LEU A 96 UNP P0ABN1 MET 97 ENGINEERED MUTATION SEQADV 4BPD ASP A 107 UNP P0ABN1 VAL 108 ENGINEERED MUTATION SEQADV 4BPD ALA A 113 UNP P0ABN1 CYS 114 ENGINEERED MUTATION SEQADV 4BPD GLY B -8 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS B -7 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS B -6 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS B -5 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS B -4 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS B -3 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS B -2 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD GLU B -1 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD LEU B 0 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD CYS B 41 UNP P0ABN1 ALA 42 ENGINEERED MUTATION SEQADV 4BPD ALA B 46 UNP P0ABN1 CYS 47 ENGINEERED MUTATION SEQADV 4BPD VAL B 53 UNP P0ABN1 ILE 54 ENGINEERED MUTATION SEQADV 4BPD LEU B 70 UNP P0ABN1 ILE 71 ENGINEERED MUTATION SEQADV 4BPD LEU B 96 UNP P0ABN1 MET 97 ENGINEERED MUTATION SEQADV 4BPD ASP B 107 UNP P0ABN1 VAL 108 ENGINEERED MUTATION SEQADV 4BPD ALA B 113 UNP P0ABN1 CYS 114 ENGINEERED MUTATION SEQADV 4BPD GLY C -8 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS C -7 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS C -6 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS C -5 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS C -4 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS C -3 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS C -2 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD GLU C -1 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD LEU C 0 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD CYS C 41 UNP P0ABN1 ALA 42 ENGINEERED MUTATION SEQADV 4BPD ALA C 46 UNP P0ABN1 CYS 47 ENGINEERED MUTATION SEQADV 4BPD VAL C 53 UNP P0ABN1 ILE 54 ENGINEERED MUTATION SEQADV 4BPD LEU C 70 UNP P0ABN1 ILE 71 ENGINEERED MUTATION SEQADV 4BPD LEU C 96 UNP P0ABN1 MET 97 ENGINEERED MUTATION SEQADV 4BPD ASP C 107 UNP P0ABN1 VAL 108 ENGINEERED MUTATION SEQADV 4BPD ALA C 113 UNP P0ABN1 CYS 114 ENGINEERED MUTATION SEQADV 4BPD GLY D -8 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS D -7 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS D -6 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS D -5 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS D -4 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS D -3 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS D -2 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD GLU D -1 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD LEU D 0 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD CYS D 41 UNP P0ABN1 ALA 42 ENGINEERED MUTATION SEQADV 4BPD ALA D 46 UNP P0ABN1 CYS 47 ENGINEERED MUTATION SEQADV 4BPD VAL D 53 UNP P0ABN1 ILE 54 ENGINEERED MUTATION SEQADV 4BPD LEU D 70 UNP P0ABN1 ILE 71 ENGINEERED MUTATION SEQADV 4BPD LEU D 96 UNP P0ABN1 MET 97 ENGINEERED MUTATION SEQADV 4BPD ASP D 107 UNP P0ABN1 VAL 108 ENGINEERED MUTATION SEQADV 4BPD ALA D 113 UNP P0ABN1 CYS 114 ENGINEERED MUTATION SEQADV 4BPD GLY E -8 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS E -7 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS E -6 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS E -5 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS E -4 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS E -3 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS E -2 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD GLU E -1 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD LEU E 0 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD CYS E 41 UNP P0ABN1 ALA 42 ENGINEERED MUTATION SEQADV 4BPD ALA E 46 UNP P0ABN1 CYS 47 ENGINEERED MUTATION SEQADV 4BPD VAL E 53 UNP P0ABN1 ILE 54 ENGINEERED MUTATION SEQADV 4BPD LEU E 70 UNP P0ABN1 ILE 71 ENGINEERED MUTATION SEQADV 4BPD LEU E 96 UNP P0ABN1 MET 97 ENGINEERED MUTATION SEQADV 4BPD ASP E 107 UNP P0ABN1 VAL 108 ENGINEERED MUTATION SEQADV 4BPD ALA E 113 UNP P0ABN1 CYS 114 ENGINEERED MUTATION SEQADV 4BPD GLY F -8 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS F -7 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS F -6 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS F -5 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS F -4 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS F -3 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD HIS F -2 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD GLU F -1 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD LEU F 0 UNP P0ABN1 EXPRESSION TAG SEQADV 4BPD CYS F 41 UNP P0ABN1 ALA 42 ENGINEERED MUTATION SEQADV 4BPD ALA F 46 UNP P0ABN1 CYS 47 ENGINEERED MUTATION SEQADV 4BPD VAL F 53 UNP P0ABN1 ILE 54 ENGINEERED MUTATION SEQADV 4BPD LEU F 70 UNP P0ABN1 ILE 71 ENGINEERED MUTATION SEQADV 4BPD LEU F 96 UNP P0ABN1 MET 97 ENGINEERED MUTATION SEQADV 4BPD ASP F 107 UNP P0ABN1 VAL 108 ENGINEERED MUTATION SEQADV 4BPD ALA F 113 UNP P0ABN1 CYS 114 ENGINEERED MUTATION SEQRES 1 A 130 GLY HIS HIS HIS HIS HIS HIS GLU LEU ALA ASN ASN THR SEQRES 2 A 130 THR GLY PHE THR ARG ILE ILE LYS ALA ALA GLY TYR SER SEQRES 3 A 130 TRP LYS GLY LEU ARG ALA ALA TRP ILE ASN GLU ALA ALA SEQRES 4 A 130 PHE ARG GLN GLU GLY VAL ALA VAL LEU LEU CYS VAL VAL SEQRES 5 A 130 ILE ALA ALA TRP LEU ASP VAL ASP ALA VAL THR ARG VAL SEQRES 6 A 130 LEU LEU ILE SER SER VAL MET LEU VAL MET ILE VAL GLU SEQRES 7 A 130 LEU LEU ASN SER ALA ILE GLU ALA VAL VAL ASP ARG ILE SEQRES 8 A 130 GLY SER GLU TYR HIS GLU LEU SER GLY ARG ALA LYS ASP SEQRES 9 A 130 LEU GLY SER ALA ALA VAL LEU ILE ALA ILE ILE ASP ALA SEQRES 10 A 130 VAL ILE THR TRP ALA ILE LEU LEU TRP SER HIS PHE GLY SEQRES 1 B 130 GLY HIS HIS HIS HIS HIS HIS GLU LEU ALA ASN ASN THR SEQRES 2 B 130 THR GLY PHE THR ARG ILE ILE LYS ALA ALA GLY TYR SER SEQRES 3 B 130 TRP LYS GLY LEU ARG ALA ALA TRP ILE ASN GLU ALA ALA SEQRES 4 B 130 PHE ARG GLN GLU GLY VAL ALA VAL LEU LEU CYS VAL VAL SEQRES 5 B 130 ILE ALA ALA TRP LEU ASP VAL ASP ALA VAL THR ARG VAL SEQRES 6 B 130 LEU LEU ILE SER SER VAL MET LEU VAL MET ILE VAL GLU SEQRES 7 B 130 LEU LEU ASN SER ALA ILE GLU ALA VAL VAL ASP ARG ILE SEQRES 8 B 130 GLY SER GLU TYR HIS GLU LEU SER GLY ARG ALA LYS ASP SEQRES 9 B 130 LEU GLY SER ALA ALA VAL LEU ILE ALA ILE ILE ASP ALA SEQRES 10 B 130 VAL ILE THR TRP ALA ILE LEU LEU TRP SER HIS PHE GLY SEQRES 1 C 130 GLY HIS HIS HIS HIS HIS HIS GLU LEU ALA ASN ASN THR SEQRES 2 C 130 THR GLY PHE THR ARG ILE ILE LYS ALA ALA GLY TYR SER SEQRES 3 C 130 TRP LYS GLY LEU ARG ALA ALA TRP ILE ASN GLU ALA ALA SEQRES 4 C 130 PHE ARG GLN GLU GLY VAL ALA VAL LEU LEU CYS VAL VAL SEQRES 5 C 130 ILE ALA ALA TRP LEU ASP VAL ASP ALA VAL THR ARG VAL SEQRES 6 C 130 LEU LEU ILE SER SER VAL MET LEU VAL MET ILE VAL GLU SEQRES 7 C 130 LEU LEU ASN SER ALA ILE GLU ALA VAL VAL ASP ARG ILE SEQRES 8 C 130 GLY SER GLU TYR HIS GLU LEU SER GLY ARG ALA LYS ASP SEQRES 9 C 130 LEU GLY SER ALA ALA VAL LEU ILE ALA ILE ILE ASP ALA SEQRES 10 C 130 VAL ILE THR TRP ALA ILE LEU LEU TRP SER HIS PHE GLY SEQRES 1 D 130 GLY HIS HIS HIS HIS HIS HIS GLU LEU ALA ASN ASN THR SEQRES 2 D 130 THR GLY PHE THR ARG ILE ILE LYS ALA ALA GLY TYR SER SEQRES 3 D 130 TRP LYS GLY LEU ARG ALA ALA TRP ILE ASN GLU ALA ALA SEQRES 4 D 130 PHE ARG GLN GLU GLY VAL ALA VAL LEU LEU CYS VAL VAL SEQRES 5 D 130 ILE ALA ALA TRP LEU ASP VAL ASP ALA VAL THR ARG VAL SEQRES 6 D 130 LEU LEU ILE SER SER VAL MET LEU VAL MET ILE VAL GLU SEQRES 7 D 130 LEU LEU ASN SER ALA ILE GLU ALA VAL VAL ASP ARG ILE SEQRES 8 D 130 GLY SER GLU TYR HIS GLU LEU SER GLY ARG ALA LYS ASP SEQRES 9 D 130 LEU GLY SER ALA ALA VAL LEU ILE ALA ILE ILE ASP ALA SEQRES 10 D 130 VAL ILE THR TRP ALA ILE LEU LEU TRP SER HIS PHE GLY SEQRES 1 E 130 GLY HIS HIS HIS HIS HIS HIS GLU LEU ALA ASN ASN THR SEQRES 2 E 130 THR GLY PHE THR ARG ILE ILE LYS ALA ALA GLY TYR SER SEQRES 3 E 130 TRP LYS GLY LEU ARG ALA ALA TRP ILE ASN GLU ALA ALA SEQRES 4 E 130 PHE ARG GLN GLU GLY VAL ALA VAL LEU LEU CYS VAL VAL SEQRES 5 E 130 ILE ALA ALA TRP LEU ASP VAL ASP ALA VAL THR ARG VAL SEQRES 6 E 130 LEU LEU ILE SER SER VAL MET LEU VAL MET ILE VAL GLU SEQRES 7 E 130 LEU LEU ASN SER ALA ILE GLU ALA VAL VAL ASP ARG ILE SEQRES 8 E 130 GLY SER GLU TYR HIS GLU LEU SER GLY ARG ALA LYS ASP SEQRES 9 E 130 LEU GLY SER ALA ALA VAL LEU ILE ALA ILE ILE ASP ALA SEQRES 10 E 130 VAL ILE THR TRP ALA ILE LEU LEU TRP SER HIS PHE GLY SEQRES 1 F 130 GLY HIS HIS HIS HIS HIS HIS GLU LEU ALA ASN ASN THR SEQRES 2 F 130 THR GLY PHE THR ARG ILE ILE LYS ALA ALA GLY TYR SER SEQRES 3 F 130 TRP LYS GLY LEU ARG ALA ALA TRP ILE ASN GLU ALA ALA SEQRES 4 F 130 PHE ARG GLN GLU GLY VAL ALA VAL LEU LEU CYS VAL VAL SEQRES 5 F 130 ILE ALA ALA TRP LEU ASP VAL ASP ALA VAL THR ARG VAL SEQRES 6 F 130 LEU LEU ILE SER SER VAL MET LEU VAL MET ILE VAL GLU SEQRES 7 F 130 LEU LEU ASN SER ALA ILE GLU ALA VAL VAL ASP ARG ILE SEQRES 8 F 130 GLY SER GLU TYR HIS GLU LEU SER GLY ARG ALA LYS ASP SEQRES 9 F 130 LEU GLY SER ALA ALA VAL LEU ILE ALA ILE ILE ASP ALA SEQRES 10 F 130 VAL ILE THR TRP ALA ILE LEU LEU TRP SER HIS PHE GLY HET 78M A1122 22 HET 78M A1123 22 HET 78M B1122 22 HET ZN D1122 1 HET 78M D1123 22 HETNAM 78M (2S)-2,3-DIHYDROXYPROPYL(7Z)-PENTADEC-7-ENOATE HETNAM ZN ZINC ION HETSYN 78M 7.8 MONOACYLGLYCEROL FORMUL 7 78M 4(C18 H34 O4) FORMUL 10 ZN ZN 2+ HELIX 1 1 THR A 4 GLU A 28 1 25 HELIX 2 2 GLU A 28 LEU A 48 1 21 HELIX 3 3 ASP A 51 ILE A 82 1 32 HELIX 4 4 HIS A 87 PHE A 120 1 34 HELIX 5 5 GLU B 28 LEU B 48 1 21 HELIX 6 6 ASP B 51 GLY B 83 1 33 HELIX 7 7 HIS B 87 GLY B 121 1 35 HELIX 8 8 ALA C 29 LEU C 48 1 20 HELIX 9 9 ASP C 51 GLY C 83 1 33 HELIX 10 10 HIS C 87 PHE C 120 1 34 HELIX 11 11 TYR D 16 GLU D 28 1 13 HELIX 12 12 GLU D 28 LEU D 48 1 21 HELIX 13 13 ASP D 51 ARG D 81 1 31 HELIX 14 14 HIS D 87 PHE D 120 1 34 HELIX 15 15 ARG E 32 LEU E 48 1 17 HELIX 16 16 ASP E 51 GLY E 83 1 33 HELIX 17 17 HIS E 87 PHE E 120 1 34 HELIX 18 18 ALA F 29 LEU F 48 1 20 HELIX 19 19 ASP F 51 HIS F 87 1 37 HELIX 20 20 ARG F 92 PHE F 120 1 29 LINK OE2 GLU D 28 ZN ZN D1122 1555 1555 2.00 LINK OE1 GLU D 28 ZN ZN D1122 1555 1555 2.00 LINK OE1 GLU D 76 ZN ZN D1122 1555 1555 2.00 LINK OE2 GLU D 76 ZN ZN D1122 1555 1555 2.00 SITE 1 AC1 2 GLU D 28 GLU D 76 SITE 1 AC2 9 TRP A 18 LEU A 21 ARG A 22 TRP A 25 SITE 2 AC2 9 ILE A 26 LEU A 39 MET A 63 MET A 66 SITE 3 AC2 9 78M A1123 SITE 1 AC3 8 GLN A 33 CYS A 41 VAL A 62 78M B1122 SITE 2 AC3 8 TRP C 117 TRP D 25 GLN D 33 VAL D 36 SITE 1 AC4 7 ALA B 46 ARG B 55 ALA C 113 ILE C 114 SITE 2 AC4 7 VAL D 36 LEU D 40 78M D1123 SITE 1 AC5 3 TRP A 18 ARG A 22 78M A1122 CRYST1 74.870 93.430 144.020 90.00 90.00 90.00 P 21 21 21 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013356 0.000000 0.000000 0.00000 SCALE2 0.000000 0.010703 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006943 0.00000