HEADER LIGASE 20-JUN-13 4BUB TITLE CRYSTAL STRUCTURE OF MURE LIGASE FROM THERMOTOGA MARITIMA TITLE 2 IN COMPLEX WITH ADP COMPND MOL_ID: 1; COMPND 2 MOLECULE: UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE--LD-LYSINE COMPND 3 LIGASE; COMPND 4 CHAIN: A, B; COMPND 5 SYNONYM: MURD LIGASE, D-GLUTAMIC ACID-ADDING ENZYME, COMPND 6 UDP-N-ACETYLMURAMOYL-L-ALANYL-D-GLUTAMATE SYNTHETASE; COMPND 7 EC: 6.3.2.37, 6.3.2.7; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: THERMOTOGA MARITIMA; SOURCE 3 ORGANISM_TAXID: 2336; SOURCE 4 STRAIN: DSM 3109; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET30B KEYWDS LIGASE, PEPTIDOGLYCAN SYNTHESIS, MURE, ADP-FORMING ENZYME, CELL KEYWDS 2 WALL, CELL SHAPE, CELL CYCLE, NUCLEOTIDE-BINDING, ATP- BINDING, KEYWDS 3 CELL DIVISION EXPDTA X-RAY DIFFRACTION AUTHOR S.FAVINI-STABILE,C.CONTRERAS-MARTEL,N.THIELENS,A.DESSEN REVDAT 2 18-DEC-13 4BUB 1 JRNL REVDAT 1 17-JUL-13 4BUB 0 JRNL AUTH S.FAVINI-STABILE,C.CONTRERAS-MARTEL,N.THIELENS,A.DESSEN JRNL TITL MREB AND MURG AS SCAFFOLDS FOR THE CYTOPLASMIC STEPS OF JRNL TITL 2 PEPTIDOGLYCAN BIOSYNTHESIS JRNL REF ENVIRON.MICROBIOL. V. 15 3218 2013 JRNL REFN ISSN 1462-2912 JRNL PMID 23826965 JRNL DOI 10.1111/1462-2920.12171 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU, REMARK 3 STEINER,NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.48 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.99 REMARK 3 NUMBER OF REFLECTIONS : 26319 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.22419 REMARK 3 R VALUE (WORKING SET) : 0.21802 REMARK 3 FREE R VALUE : 0.28138 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.9 REMARK 3 FREE R VALUE TEST SET COUNT : 2908 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.901 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.976 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1472 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 71.37 REMARK 3 BIN R VALUE (WORKING SET) : 0.465 REMARK 3 BIN FREE R VALUE SET COUNT : 166 REMARK 3 BIN FREE R VALUE : 0.492 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7403 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 200 REMARK 3 SOLVENT ATOMS : 17 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 94.853 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 110.399 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.49 REMARK 3 B22 (A**2) : -0.49 REMARK 3 B33 (A**2) : 1.57 REMARK 3 B12 (A**2) : -0.49 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.461 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.445 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 25.587 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.955 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.919 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7728 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10437 ; 1.209 ; 1.981 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 957 ; 8.774 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 357 ;32.589 ;23.922 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1333 ;22.522 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 60 ;20.499 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1190 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5750 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3840 ;10.286 ;10.536 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4793 ;15.140 ;15.801 REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3888 ;12.468 ;11.350 REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 3 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 99 4 REMARK 3 1 B 1 B 99 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 739 ; 0.69 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 739 ; 12.14 ; 2.00 REMARK 3 MEDIUM POSITIONAL 1 B (A): 739 ; 0.69 ; 0.50 REMARK 3 MEDIUM THERMAL 1 B (A**2): 739 ; 12.14 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 100 A 325 4 REMARK 3 1 B 100 B 325 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 2 A (A): 1758 ; 0.49 ; 0.50 REMARK 3 MEDIUM THERMAL 2 A (A**2): 1758 ; 12.04 ; 2.00 REMARK 3 MEDIUM POSITIONAL 2 B (A): 1758 ; 0.49 ; 0.50 REMARK 3 MEDIUM THERMAL 2 B (A**2): 1758 ; 12.04 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 326 A 486 4 REMARK 3 1 B 326 B 486 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 3 A (A): 1258 ; 0.47 ; 0.50 REMARK 3 MEDIUM THERMAL 3 A (A**2): 1258 ; 9.46 ; 2.00 REMARK 3 MEDIUM POSITIONAL 3 B (A): 1258 ; 0.47 ; 0.50 REMARK 3 MEDIUM THERMAL 3 B (A**2): 1258 ; 9.46 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. REMARK 4 REMARK 4 4BUB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-JUN-13. REMARK 100 THE PDBE ID CODE IS EBI-57322. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 17-NOV-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97921 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD (QUANTUM 315R) REMARK 200 DETECTOR MANUFACTURER : ADSC REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 29228 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.90 REMARK 200 RESOLUTION RANGE LOW (A) : 20.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 200 DATA REDUNDANCY : 11 REMARK 200 R MERGE (I) : 0.06 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 40.00 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.07 REMARK 200 COMPLETENESS FOR SHELL (%) : 81.0 REMARK 200 DATA REDUNDANCY IN SHELL : 12.1 REMARK 200 R MERGE FOR SHELL (I) : 0.10 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.00 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: AUTOSHARP REMARK 200 STARTING MODEL: NONE REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.24 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M CITIRC ACID PH5, REMARK 280 3% PEGMME 5000 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 147.25300 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 294.50600 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 220.87950 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 368.13250 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 73.62650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 46 REMARK 465 GLU A 47 REMARK 465 LYS A 48 REMARK 465 PHE A 49 REMARK 465 ASP A 50 REMARK 465 SER A 51 REMARK 465 HIS A 52 REMARK 465 ARG A 486 REMARK 465 LYS A 487 REMARK 465 TYR A 488 REMARK 465 ALA A 489 REMARK 465 GLN A 490 REMARK 465 LEU A 491 REMARK 465 GLU A 492 REMARK 465 HIS A 493 REMARK 465 HIS A 494 REMARK 465 HIS A 495 REMARK 465 HIS A 496 REMARK 465 HIS A 497 REMARK 465 HIS A 498 REMARK 465 LYS B 48 REMARK 465 PHE B 49 REMARK 465 ARG B 486 REMARK 465 LYS B 487 REMARK 465 TYR B 488 REMARK 465 ALA B 489 REMARK 465 GLN B 490 REMARK 465 LEU B 491 REMARK 465 GLU B 492 REMARK 465 HIS B 493 REMARK 465 HIS B 494 REMARK 465 HIS B 495 REMARK 465 HIS B 496 REMARK 465 HIS B 497 REMARK 465 HIS B 498 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 16 NH1 ARG A 18 2.18 REMARK 500 O PRO A 56 OE1 GLU A 60 2.10 REMARK 500 NH2 ARG A 453 O PHE A 469 2.16 REMARK 500 O GLU B 409 OE1 GLU B 413 1.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 NE2 GLN A 186 OG1 THR B 211 5664 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ILE A 6 -81.67 -59.30 REMARK 500 VAL A 7 -58.49 -23.65 REMARK 500 LEU A 15 -73.87 -72.71 REMARK 500 ARG A 18 76.38 -102.24 REMARK 500 TYR A 21 3.04 -59.94 REMARK 500 LEU A 23 69.88 -49.95 REMARK 500 GLU A 24 132.67 -29.36 REMARK 500 SER A 33 -33.17 -30.69 REMARK 500 ASP A 75 3.09 -52.32 REMARK 500 VAL A 91 -72.30 -43.53 REMARK 500 ALA A 92 -55.87 -25.54 REMARK 500 GLU A 97 58.89 73.67 REMARK 500 ASP A 98 73.38 33.81 REMARK 500 LEU A 125 -60.32 -94.99 REMARK 500 GLU A 130 161.76 156.94 REMARK 500 LEU A 135 101.97 -160.68 REMARK 500 THR A 136 -155.67 -125.59 REMARK 500 LEU A 143 -92.37 -160.77 REMARK 500 SER A 146 62.08 -100.09 REMARK 500 TYR A 147 70.29 -46.56 REMARK 500 ASP A 149 -150.38 -172.47 REMARK 500 ASP A 155 -162.78 -109.99 REMARK 500 GLN A 185 -38.09 -36.36 REMARK 500 ASP A 204 -124.27 -83.66 REMARK 500 HIS A 205 31.21 -140.88 REMARK 500 HIS A 209 -78.10 -105.57 REMARK 500 LEU A 222 -39.90 -35.88 REMARK 500 LEU A 225 27.62 -76.25 REMARK 500 PHE A 242 96.74 -59.32 REMARK 500 LEU A 281 144.28 167.78 REMARK 500 ALA A 302 -73.95 -75.53 REMARK 500 ILE A 337 -77.76 -83.07 REMARK 500 ALA A 346 105.50 -18.22 REMARK 500 ASP A 401 -110.36 -109.89 REMARK 500 ASP A 402 76.72 -119.93 REMARK 500 ARG A 404 -92.81 -50.87 REMARK 500 ASP A 420 105.72 -53.71 REMARK 500 ASN A 443 -165.81 -100.93 REMARK 500 ARG A 444 108.58 -56.56 REMARK 500 ARG A 453 -50.87 -124.47 REMARK 500 GLU A 456 135.27 -36.86 REMARK 500 GLU A 463 -51.27 -28.83 REMARK 500 LYS A 465 103.18 176.14 REMARK 500 PHE A 469 88.68 -165.56 REMARK 500 VAL B 17 79.22 -105.16 REMARK 500 PRO B 20 113.11 -24.73 REMARK 500 TYR B 21 5.54 -52.90 REMARK 500 LEU B 23 129.99 -37.78 REMARK 500 ASN B 30 -34.13 -150.76 REMARK 500 SER B 32 -2.25 -58.56 REMARK 500 REMARK 500 THIS ENTRY HAS 100 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP B 204 HIS B 205 144.46 REMARK 500 GLY B 338 LEU B 339 -145.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1487 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP B1486 O1B REMARK 620 2 ADP B1486 O3B 56.7 REMARK 620 3 THR B 137 OG1 167.9 111.3 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A1486 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A1487 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B1486 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B1487 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BUC RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF MURD LIGASE FROM THERMOTOGA REMARK 900 MARITIMA IN APO FORM DBREF 4BUB A 1 490 UNP Q9WY79 MURE_THEMA 1 490 DBREF 4BUB B 1 490 UNP Q9WY79 MURE_THEMA 1 490 SEQADV 4BUB LEU A 491 UNP Q9WY79 EXPRESSION TAG SEQADV 4BUB GLU A 492 UNP Q9WY79 EXPRESSION TAG SEQADV 4BUB HIS A 493 UNP Q9WY79 EXPRESSION TAG SEQADV 4BUB HIS A 494 UNP Q9WY79 EXPRESSION TAG SEQADV 4BUB HIS A 495 UNP Q9WY79 EXPRESSION TAG SEQADV 4BUB HIS A 496 UNP Q9WY79 EXPRESSION TAG SEQADV 4BUB HIS A 497 UNP Q9WY79 EXPRESSION TAG SEQADV 4BUB HIS A 498 UNP Q9WY79 EXPRESSION TAG SEQADV 4BUB LEU B 491 UNP Q9WY79 EXPRESSION TAG SEQADV 4BUB GLU B 492 UNP Q9WY79 EXPRESSION TAG SEQADV 4BUB HIS B 493 UNP Q9WY79 EXPRESSION TAG SEQADV 4BUB HIS B 494 UNP Q9WY79 EXPRESSION TAG SEQADV 4BUB HIS B 495 UNP Q9WY79 EXPRESSION TAG SEQADV 4BUB HIS B 496 UNP Q9WY79 EXPRESSION TAG SEQADV 4BUB HIS B 497 UNP Q9WY79 EXPRESSION TAG SEQADV 4BUB HIS B 498 UNP Q9WY79 EXPRESSION TAG SEQRES 1 A 498 MSE ASN ILE SER THR ILE VAL SER ASN LEU LYS ASP LEU SEQRES 2 A 498 ILE LEU GLU VAL ARG ALA PRO TYR ASP LEU GLU ILE THR SEQRES 3 A 498 GLY VAL SER ASN HIS SER SER LYS VAL LYS LYS GLY ASP SEQRES 4 A 498 LEU PHE ILE CYS ARG ARG GLY GLU LYS PHE ASP SER HIS SEQRES 5 A 498 GLU ILE ILE PRO GLU VAL MSE GLU LYS GLY ALA VAL ALA SEQRES 6 A 498 VAL VAL VAL GLU ARG GLU ILE ASP LEU ASP PHE PRO TYR SEQRES 7 A 498 ILE GLN VAL PHE ASP SER ARG TYR PHE GLU ALA LYS VAL SEQRES 8 A 498 ALA SER LEU PHE PHE GLU ASP PRO TRP LYS ASP VAL LEU SEQRES 9 A 498 THR PHE GLY VAL THR GLY THR ASN GLY LYS THR THR THR SEQRES 10 A 498 THR MSE MSE ILE TYR HIS MSE LEU THR SER LEU GLY GLU SEQRES 11 A 498 ARG GLY SER VAL LEU THR THR ALA VAL LYS ARG ILE LEU SEQRES 12 A 498 GLY ASN SER TYR TYR ASP ASP ILE THR THR PRO ASP ALA SEQRES 13 A 498 ILE THR ILE LEU SER ALA MSE LYS GLU ASN ARG GLU GLY SEQRES 14 A 498 GLY GLY LYS PHE PHE ALA LEU GLU VAL SER SER HIS ALA SEQRES 15 A 498 LEU VAL GLN GLN ARG VAL GLU GLY VAL ARG PHE ASP VAL SEQRES 16 A 498 GLY ILE PHE THR ASN ILE SER ARG ASP HIS LEU ASP PHE SEQRES 17 A 498 HIS GLY THR PHE GLU ASN TYR LEU LYS ALA LYS LEU HIS SEQRES 18 A 498 LEU PHE ASP LEU LEU LYS ASP ASP GLY VAL ALA VAL LEU SEQRES 19 A 498 ASN GLU SER LEU ALA ASP ALA PHE ASN ARG LYS SER ARG SEQRES 20 A 498 LYS ILE THR PHE GLY THR SER LYS ASN ALA ASP TYR ARG SEQRES 21 A 498 LEU GLY ASN ILE GLU VAL SER TRP GLU GLY THR GLN PHE SEQRES 22 A 498 VAL LEU GLU THR PRO ASP GLY LEU LEU LYS VAL PHE THR SEQRES 23 A 498 ARG ALA ILE GLY ASP PHE ASN ALA TYR ASN ALA ALA ALA SEQRES 24 A 498 ALA ILE ALA ALA LEU HIS GLN LEU GLY TYR ASP PRO LYS SEQRES 25 A 498 ASP LEU ALA SER SER LEU GLU THR PHE THR GLY VAL GLU SEQRES 26 A 498 GLY ARG PHE GLU VAL VAL ARG GLY ALA LYS LYS ILE GLY SEQRES 27 A 498 LEU ASN VAL VAL VAL ASP PHE ALA HIS SER PRO ASP ALA SEQRES 28 A 498 LEU GLU LYS LEU LEU LYS ASN VAL ARG LYS ILE SER GLN SEQRES 29 A 498 GLY ARG VAL ILE VAL VAL PHE GLY ALA GLY GLY ASN SER SEQRES 30 A 498 ASP ARG GLY LYS ARG PRO MSE MSE SER GLU VAL ALA SER SEQRES 31 A 498 LYS LEU ALA ASP VAL VAL ILE LEU THR THR ASP ASP PRO SEQRES 32 A 498 ARG GLY GLU ASP PRO GLU GLN ILE MSE GLU ASP LEU ILE SEQRES 33 A 498 LYS GLY ILE ASP LYS ARG LYS PRO TYR LEU VAL LEU PHE SEQRES 34 A 498 ASP ARG ARG GLU ALA ILE GLU THR ALA LEU THR ILE ALA SEQRES 35 A 498 ASN ARG GLY ASP SER VAL VAL ILE ALA GLY ARG GLY HIS SEQRES 36 A 498 GLU ARG TYR GLN ILE ILE ASP GLU GLU LYS LYS VAL PRO SEQRES 37 A 498 PHE GLN ASP ARG GLU VAL VAL GLU GLU ILE ILE ARG ASP SEQRES 38 A 498 LYS LEU LYS GLY ARG LYS TYR ALA GLN LEU GLU HIS HIS SEQRES 39 A 498 HIS HIS HIS HIS SEQRES 1 B 498 MSE ASN ILE SER THR ILE VAL SER ASN LEU LYS ASP LEU SEQRES 2 B 498 ILE LEU GLU VAL ARG ALA PRO TYR ASP LEU GLU ILE THR SEQRES 3 B 498 GLY VAL SER ASN HIS SER SER LYS VAL LYS LYS GLY ASP SEQRES 4 B 498 LEU PHE ILE CYS ARG ARG GLY GLU LYS PHE ASP SER HIS SEQRES 5 B 498 GLU ILE ILE PRO GLU VAL MSE GLU LYS GLY ALA VAL ALA SEQRES 6 B 498 VAL VAL VAL GLU ARG GLU ILE ASP LEU ASP PHE PRO TYR SEQRES 7 B 498 ILE GLN VAL PHE ASP SER ARG TYR PHE GLU ALA LYS VAL SEQRES 8 B 498 ALA SER LEU PHE PHE GLU ASP PRO TRP LYS ASP VAL LEU SEQRES 9 B 498 THR PHE GLY VAL THR GLY THR ASN GLY LYS THR THR THR SEQRES 10 B 498 THR MSE MSE ILE TYR HIS MSE LEU THR SER LEU GLY GLU SEQRES 11 B 498 ARG GLY SER VAL LEU THR THR ALA VAL LYS ARG ILE LEU SEQRES 12 B 498 GLY ASN SER TYR TYR ASP ASP ILE THR THR PRO ASP ALA SEQRES 13 B 498 ILE THR ILE LEU SER ALA MSE LYS GLU ASN ARG GLU GLY SEQRES 14 B 498 GLY GLY LYS PHE PHE ALA LEU GLU VAL SER SER HIS ALA SEQRES 15 B 498 LEU VAL GLN GLN ARG VAL GLU GLY VAL ARG PHE ASP VAL SEQRES 16 B 498 GLY ILE PHE THR ASN ILE SER ARG ASP HIS LEU ASP PHE SEQRES 17 B 498 HIS GLY THR PHE GLU ASN TYR LEU LYS ALA LYS LEU HIS SEQRES 18 B 498 LEU PHE ASP LEU LEU LYS ASP ASP GLY VAL ALA VAL LEU SEQRES 19 B 498 ASN GLU SER LEU ALA ASP ALA PHE ASN ARG LYS SER ARG SEQRES 20 B 498 LYS ILE THR PHE GLY THR SER LYS ASN ALA ASP TYR ARG SEQRES 21 B 498 LEU GLY ASN ILE GLU VAL SER TRP GLU GLY THR GLN PHE SEQRES 22 B 498 VAL LEU GLU THR PRO ASP GLY LEU LEU LYS VAL PHE THR SEQRES 23 B 498 ARG ALA ILE GLY ASP PHE ASN ALA TYR ASN ALA ALA ALA SEQRES 24 B 498 ALA ILE ALA ALA LEU HIS GLN LEU GLY TYR ASP PRO LYS SEQRES 25 B 498 ASP LEU ALA SER SER LEU GLU THR PHE THR GLY VAL GLU SEQRES 26 B 498 GLY ARG PHE GLU VAL VAL ARG GLY ALA LYS LYS ILE GLY SEQRES 27 B 498 LEU ASN VAL VAL VAL ASP PHE ALA HIS SER PRO ASP ALA SEQRES 28 B 498 LEU GLU LYS LEU LEU LYS ASN VAL ARG LYS ILE SER GLN SEQRES 29 B 498 GLY ARG VAL ILE VAL VAL PHE GLY ALA GLY GLY ASN SER SEQRES 30 B 498 ASP ARG GLY LYS ARG PRO MSE MSE SER GLU VAL ALA SER SEQRES 31 B 498 LYS LEU ALA ASP VAL VAL ILE LEU THR THR ASP ASP PRO SEQRES 32 B 498 ARG GLY GLU ASP PRO GLU GLN ILE MSE GLU ASP LEU ILE SEQRES 33 B 498 LYS GLY ILE ASP LYS ARG LYS PRO TYR LEU VAL LEU PHE SEQRES 34 B 498 ASP ARG ARG GLU ALA ILE GLU THR ALA LEU THR ILE ALA SEQRES 35 B 498 ASN ARG GLY ASP SER VAL VAL ILE ALA GLY ARG GLY HIS SEQRES 36 B 498 GLU ARG TYR GLN ILE ILE ASP GLU GLU LYS LYS VAL PRO SEQRES 37 B 498 PHE GLN ASP ARG GLU VAL VAL GLU GLU ILE ILE ARG ASP SEQRES 38 B 498 LYS LEU LYS GLY ARG LYS TYR ALA GLN LEU GLU HIS HIS SEQRES 39 B 498 HIS HIS HIS HIS MODRES 4BUB MSE A 1 MET SELENOMETHIONINE MODRES 4BUB MSE A 59 MET SELENOMETHIONINE MODRES 4BUB MSE A 119 MET SELENOMETHIONINE MODRES 4BUB MSE A 120 MET SELENOMETHIONINE MODRES 4BUB MSE A 124 MET SELENOMETHIONINE MODRES 4BUB MSE A 163 MET SELENOMETHIONINE MODRES 4BUB MSE A 384 MET SELENOMETHIONINE MODRES 4BUB MSE A 385 MET SELENOMETHIONINE MODRES 4BUB MSE A 412 MET SELENOMETHIONINE MODRES 4BUB MSE B 1 MET SELENOMETHIONINE MODRES 4BUB MSE B 59 MET SELENOMETHIONINE MODRES 4BUB MSE B 119 MET SELENOMETHIONINE MODRES 4BUB MSE B 120 MET SELENOMETHIONINE MODRES 4BUB MSE B 124 MET SELENOMETHIONINE MODRES 4BUB MSE B 163 MET SELENOMETHIONINE MODRES 4BUB MSE B 384 MET SELENOMETHIONINE MODRES 4BUB MSE B 385 MET SELENOMETHIONINE MODRES 4BUB MSE B 412 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 59 8 HET MSE A 119 8 HET MSE A 120 8 HET MSE A 124 8 HET MSE A 163 8 HET MSE A 384 8 HET MSE A 385 8 HET MSE A 412 8 HET ADP A1486 27 HET MG A1487 1 HET MSE B 1 8 HET MSE B 59 8 HET MSE B 119 8 HET MSE B 120 8 HET MSE B 124 8 HET MSE B 163 8 HET MSE B 384 8 HET MSE B 385 8 HET MSE B 412 8 HET ADP B1486 27 HET MG B1487 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM MSE SELENOMETHIONINE HETNAM MG MAGNESIUM ION FORMUL 3 ADP 2(C10 H15 N5 O10 P2) FORMUL 4 MSE 18(C5 H11 N O2 SE) FORMUL 5 MG 2(MG 2+) FORMUL 6 HOH *17(H2 O) HELIX 1 1 ASN A 2 LEU A 10 1 9 HELIX 2 2 GLU A 53 LYS A 61 1 9 HELIX 3 3 ASP A 83 PHE A 96 1 14 HELIX 4 4 GLY A 113 SER A 127 1 15 HELIX 5 5 ASP A 155 GLY A 169 1 15 HELIX 6 6 HIS A 181 GLN A 186 1 6 HELIX 7 7 THR A 211 HIS A 221 1 11 HELIX 8 8 LEU A 222 ASP A 224 5 3 HELIX 9 9 SER A 237 ALA A 239 5 3 HELIX 10 10 PHE A 292 GLN A 306 1 15 HELIX 11 11 ASP A 310 SER A 316 1 7 HELIX 12 12 ARG A 332 LYS A 335 5 4 HELIX 13 13 SER A 348 SER A 363 1 16 HELIX 14 14 ARG A 382 ALA A 393 1 12 HELIX 15 15 PRO A 408 LYS A 417 1 10 HELIX 16 16 ASP A 430 ALA A 442 1 13 HELIX 17 17 GLN A 470 GLY A 485 1 16 HELIX 18 18 ASN B 2 LEU B 10 1 9 HELIX 19 19 ASP B 50 LYS B 61 1 12 HELIX 20 20 ASP B 83 GLU B 97 1 15 HELIX 21 21 ASP B 98 ASP B 102 5 5 HELIX 22 22 GLY B 113 LEU B 128 1 16 HELIX 23 23 ASP B 155 GLY B 170 1 16 HELIX 24 24 SER B 179 GLN B 185 1 7 HELIX 25 25 THR B 211 HIS B 221 1 11 HELIX 26 26 LEU B 222 ASP B 224 5 3 HELIX 27 27 SER B 237 ALA B 239 5 3 HELIX 28 28 PHE B 292 GLN B 306 1 15 HELIX 29 29 ASP B 310 SER B 316 1 7 HELIX 30 30 ARG B 332 LYS B 335 5 4 HELIX 31 31 SER B 348 SER B 363 1 16 HELIX 32 32 LYS B 381 ALA B 393 1 13 HELIX 33 33 ASP B 407 LYS B 417 1 11 HELIX 34 34 ASP B 430 ALA B 442 1 13 HELIX 35 35 GLN B 470 LYS B 484 1 15 SHEET 1 AA 5 ILE A 14 ARG A 18 0 SHEET 2 AA 5 TYR A 78 VAL A 81 -1 O TYR A 78 N ARG A 18 SHEET 3 AA 5 ALA A 65 VAL A 68 1 O VAL A 66 N ILE A 79 SHEET 4 AA 5 ASP A 39 CYS A 43 1 O PHE A 41 N VAL A 67 SHEET 5 AA 5 GLY A 27 SER A 29 1 O GLY A 27 N LEU A 40 SHEET 1 AB10 LYS A 140 ARG A 141 0 SHEET 2 AB10 SER A 133 LEU A 135 -1 O VAL A 134 N ARG A 141 SHEET 3 AB10 PHE A 173 GLU A 177 1 O PHE A 173 N SER A 133 SHEET 4 AB10 LEU A 104 THR A 109 1 O LEU A 104 N PHE A 174 SHEET 5 AB10 PHE A 193 PHE A 198 1 N ASP A 194 O THR A 105 SHEET 6 AB10 LEU A 226 ASN A 235 1 N LYS A 227 O PHE A 193 SHEET 7 AB10 ARG A 247 GLY A 252 1 O ARG A 247 N ALA A 232 SHEET 8 AB10 TYR A 259 LEU A 261 1 O TYR A 259 N GLY A 252 SHEET 9 AB10 GLN A 272 GLU A 276 -1 O GLU A 276 N ARG A 260 SHEET 10 AB10 LEU A 282 PHE A 285 -1 O LEU A 282 N LEU A 275 SHEET 1 AC 6 GLU A 329 VAL A 330 0 SHEET 2 AC 6 ASN A 340 VAL A 343 -1 O VAL A 343 N GLU A 329 SHEET 3 AC 6 SER A 447 ILE A 450 1 O VAL A 448 N VAL A 342 SHEET 4 AC 6 VAL A 367 PHE A 371 1 O ILE A 368 N VAL A 449 SHEET 5 AC 6 VAL A 395 LEU A 398 1 O VAL A 395 N VAL A 369 SHEET 6 AC 6 TYR A 425 VAL A 427 1 O LEU A 426 N LEU A 398 SHEET 1 AD 2 TYR A 458 ASP A 462 0 SHEET 2 AD 2 LYS A 465 PRO A 468 -1 O LYS A 465 N ASP A 462 SHEET 1 BA 5 ILE B 14 GLU B 16 0 SHEET 2 BA 5 TYR B 78 VAL B 81 -1 O GLN B 80 N LEU B 15 SHEET 3 BA 5 VAL B 66 VAL B 68 1 O VAL B 66 N ILE B 79 SHEET 4 BA 5 ASP B 39 ILE B 42 1 O PHE B 41 N VAL B 67 SHEET 5 BA 5 GLY B 27 SER B 29 1 O GLY B 27 N LEU B 40 SHEET 1 BB10 LYS B 140 ARG B 141 0 SHEET 2 BB10 VAL B 134 LEU B 135 -1 O VAL B 134 N ARG B 141 SHEET 3 BB10 PHE B 173 GLU B 177 1 O ALA B 175 N LEU B 135 SHEET 4 BB10 LEU B 104 THR B 109 1 O LEU B 104 N PHE B 174 SHEET 5 BB10 PHE B 193 PHE B 198 1 N ASP B 194 O THR B 105 SHEET 6 BB10 LEU B 226 ASN B 235 1 N LYS B 227 O PHE B 193 SHEET 7 BB10 LYS B 248 GLY B 252 1 O ILE B 249 N LEU B 234 SHEET 8 BB10 TYR B 259 SER B 267 1 O TYR B 259 N GLY B 252 SHEET 9 BB10 GLY B 270 GLU B 276 -1 O GLY B 270 N SER B 267 SHEET 10 BB10 LEU B 282 THR B 286 -1 O LEU B 282 N LEU B 275 SHEET 1 BC 6 GLU B 329 VAL B 331 0 SHEET 2 BC 6 ASN B 340 VAL B 343 -1 O VAL B 341 N VAL B 331 SHEET 3 BC 6 SER B 447 ILE B 450 1 O VAL B 448 N VAL B 342 SHEET 4 BC 6 VAL B 367 PHE B 371 1 O ILE B 368 N VAL B 449 SHEET 5 BC 6 VAL B 395 LEU B 398 1 O VAL B 395 N VAL B 369 SHEET 6 BC 6 TYR B 425 VAL B 427 1 O LEU B 426 N LEU B 398 SHEET 1 BD 2 TYR B 458 ASP B 462 0 SHEET 2 BD 2 LYS B 465 PRO B 468 -1 O LYS B 465 N ASP B 462 LINK C MSE A 1 N ASN A 2 1555 1555 1.33 LINK N MSE A 59 C VAL A 58 1555 1555 1.34 LINK C MSE A 59 N GLU A 60 1555 1555 1.34 LINK N MSE A 119 C THR A 118 1555 1555 1.33 LINK C MSE A 119 N MSE A 120 1555 1555 1.33 LINK C MSE A 120 N ILE A 121 1555 1555 1.34 LINK N MSE A 124 C HIS A 123 1555 1555 1.32 LINK C MSE A 124 N LEU A 125 1555 1555 1.33 LINK N MSE A 163 C ALA A 162 1555 1555 1.33 LINK C MSE A 163 N LYS A 164 1555 1555 1.33 LINK N MSE A 384 C PRO A 383 1555 1555 1.33 LINK C MSE A 384 N MSE A 385 1555 1555 1.32 LINK C MSE A 385 N SER A 386 1555 1555 1.33 LINK N MSE A 412 C ILE A 411 1555 1555 1.32 LINK C MSE A 412 N GLU A 413 1555 1555 1.33 LINK O3B ADP A1486 MG MG A1487 1555 1555 2.26 LINK C MSE B 1 N ASN B 2 1555 1555 1.34 LINK N MSE B 59 C VAL B 58 1555 1555 1.33 LINK C MSE B 59 N GLU B 60 1555 1555 1.33 LINK C MSE B 119 N MSE B 120 1555 1555 1.32 LINK N MSE B 119 C THR B 118 1555 1555 1.33 LINK C MSE B 120 N ILE B 121 1555 1555 1.34 LINK C MSE B 124 N LEU B 125 1555 1555 1.34 LINK N MSE B 124 C HIS B 123 1555 1555 1.33 LINK C MSE B 163 N LYS B 164 1555 1555 1.33 LINK N MSE B 163 C ALA B 162 1555 1555 1.33 LINK C MSE B 384 N MSE B 385 1555 1555 1.33 LINK N MSE B 384 C PRO B 383 1555 1555 1.33 LINK C MSE B 385 N SER B 386 1555 1555 1.32 LINK N MSE B 412 C ILE B 411 1555 1555 1.33 LINK C MSE B 412 N GLU B 413 1555 1555 1.34 LINK O3B ADP B1486 MG MG B1487 1555 1555 2.85 LINK O1B ADP B1486 MG MG B1487 1555 1555 2.38 LINK MG MG B1487 OG1 THR B 137 1555 1555 2.92 SITE 1 AC1 12 THR A 111 ASN A 112 GLY A 113 LYS A 114 SITE 2 AC1 12 THR A 115 THR A 116 ASN A 200 ASN A 296 SITE 3 AC1 12 ARG A 327 ALA A 351 LYS A 354 MG A1487 SITE 1 AC2 3 THR A 137 GLU A 177 ADP A1486 SITE 1 AC3 11 THR B 111 ASN B 112 GLY B 113 LYS B 114 SITE 2 AC3 11 THR B 115 GLU B 177 ASN B 200 PHE B 292 SITE 3 AC3 11 ASN B 296 ARG B 327 MG B1487 SITE 1 AC4 3 THR B 115 THR B 137 ADP B1486 CRYST1 74.387 74.387 441.759 90.00 90.00 120.00 P 61 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013443 0.007761 0.000000 0.00000 SCALE2 0.000000 0.015523 0.000000 0.00000 SCALE3 0.000000 0.000000 0.002264 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -0.966187 0.036444 -0.255254 92.24935 1 MTRIX2 2 -0.086974 0.885876 0.455696 -2.69733 1 MTRIX3 2 0.242731 0.462488 -0.852752 24.42719 1 MTRIX1 3 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 3 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 3 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 4 -0.970305 0.032599 -0.239677 91.80976 1 MTRIX2 4 -0.081176 0.889524 0.449619 -2.61092 1 MTRIX3 4 0.227856 0.455724 -0.860464 24.90182 1 MTRIX1 5 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 5 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 5 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 6 -0.993907 -0.109651 -0.011201 83.61928 1 MTRIX2 6 -0.108465 0.954934 0.276291 3.57336 1 MTRIX3 6 -0.019599 0.275823 -0.961009 36.46927 1 HETATM 1 N MSE A 1 55.330 15.653 -2.680 1.00111.09 N HETATM 2 CA MSE A 1 54.839 15.724 -4.082 1.00117.60 C HETATM 3 C MSE A 1 54.559 17.150 -4.475 1.00113.53 C HETATM 4 O MSE A 1 53.547 17.726 -4.076 1.00119.96 O HETATM 5 CB MSE A 1 53.560 14.891 -4.179 1.00132.93 C HETATM 6 CG MSE A 1 52.895 14.983 -5.561 1.00165.24 C HETATM 7 SE MSE A 1 51.660 13.472 -5.934 1.00147.65 SE HETATM 8 CE MSE A 1 53.036 12.061 -5.772 1.00175.35 C