HEADER IMMUNE SYSTEM 20-JUN-13 4BUH TITLE HUMAN IGE AGAINST THE MAJOR ALLERGEN BET V 1 - CRYSTAL STRUCTURE OF TITLE 2 CLONE M0418 SCFV COMPND MOL_ID: 1; COMPND 2 MOLECULE: CLONE M0418 SCFV; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS IMMUNE SYSTEM, ANTIBODY, ALLERGEN EXPDTA X-RAY DIFFRACTION AUTHOR A.M.DAVIES,M.LEVIN,M.LILLJEKVIST,F.CARLSSON,H.J.GOULD,B.J.SUTTON, AUTHOR 2 M.OHLIN REVDAT 5 20-DEC-23 4BUH 1 REMARK REVDAT 4 11-MAR-20 4BUH 1 SEQRES LINK REVDAT 3 14-JAN-15 4BUH 1 MODRES REVDAT 2 05-FEB-14 4BUH 1 JRNL REVDAT 1 20-NOV-13 4BUH 0 JRNL AUTH M.LEVIN,A.M.DAVIES,M.LILLJEKVIST,F.CARLSSON,H.J.GOULD, JRNL AUTH 2 B.J.SUTTON,M.OHLIN JRNL TITL HUMAN IGE AGAINST THE MAJOR ALLERGEN BET V 1 - DEFINING AN JRNL TITL 2 EPITOPE WITH LIMITED CROSS-REACTIVITY BETWEEN DIFFERENT JRNL TITL 3 PR-10 FAMILY PROTEINS JRNL REF CLIN.EXP.ALLERGY V. 44 288 2014 JRNL REFN ISSN 0954-7894 JRNL PMID 24447087 JRNL DOI 10.1111/CEA.12230 REMARK 2 REMARK 2 RESOLUTION. 1.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 27.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 109029 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.145 REMARK 3 FREE R VALUE : 0.173 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 5452 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 27.2892 - 4.0352 0.98 3630 191 0.1568 0.1636 REMARK 3 2 4.0352 - 3.2045 0.99 3587 188 0.1535 0.1846 REMARK 3 3 3.2045 - 2.7999 0.99 3570 189 0.1700 0.1753 REMARK 3 4 2.7999 - 2.5441 0.98 3570 188 0.1752 0.1857 REMARK 3 5 2.5441 - 2.3618 0.98 3556 187 0.1545 0.1630 REMARK 3 6 2.3618 - 2.2226 0.97 3506 184 0.1456 0.2099 REMARK 3 7 2.2226 - 2.1114 0.98 3503 185 0.1354 0.1656 REMARK 3 8 2.1114 - 2.0195 0.97 3484 183 0.1260 0.1438 REMARK 3 9 2.0195 - 1.9418 0.97 3553 187 0.1234 0.1556 REMARK 3 10 1.9418 - 1.8748 0.97 3484 184 0.1259 0.1643 REMARK 3 11 1.8748 - 1.8162 0.97 3469 182 0.1223 0.1534 REMARK 3 12 1.8162 - 1.7643 0.97 3482 183 0.1204 0.1511 REMARK 3 13 1.7643 - 1.7178 0.96 3456 183 0.1200 0.1578 REMARK 3 14 1.7178 - 1.6759 0.96 3450 181 0.1180 0.1598 REMARK 3 15 1.6759 - 1.6378 0.96 3457 182 0.1188 0.1893 REMARK 3 16 1.6378 - 1.6030 0.96 3418 179 0.1164 0.1644 REMARK 3 17 1.6030 - 1.5709 0.95 3432 181 0.1160 0.1540 REMARK 3 18 1.5709 - 1.5413 0.95 3423 181 0.1140 0.1575 REMARK 3 19 1.5413 - 1.5138 0.95 3437 181 0.1154 0.1479 REMARK 3 20 1.5138 - 1.4881 0.95 3387 177 0.1231 0.1675 REMARK 3 21 1.4881 - 1.4641 0.95 3373 178 0.1300 0.1873 REMARK 3 22 1.4641 - 1.4416 0.95 3414 179 0.1402 0.1859 REMARK 3 23 1.4416 - 1.4204 0.94 3377 179 0.1425 0.1742 REMARK 3 24 1.4204 - 1.4004 0.94 3366 177 0.1439 0.1926 REMARK 3 25 1.4004 - 1.3814 0.94 3405 178 0.1544 0.1892 REMARK 3 26 1.3814 - 1.3635 0.94 3340 176 0.1569 0.1970 REMARK 3 27 1.3635 - 1.3465 0.94 3399 179 0.1621 0.2042 REMARK 3 28 1.3465 - 1.3302 0.93 3316 175 0.1730 0.2092 REMARK 3 29 1.3302 - 1.3148 0.94 3370 178 0.1850 0.2365 REMARK 3 30 1.3148 - 1.3000 0.93 3363 177 0.1916 0.2461 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 15.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 12.58 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3864 REMARK 3 ANGLE : 1.169 5283 REMARK 3 CHIRALITY : 0.083 558 REMARK 3 PLANARITY : 0.006 678 REMARK 3 DIHEDRAL : 11.928 1429 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: SCFV CONSTRUCT IS NUMBERED REMARK 3 SEQUENTIALLY.NUMBERS IN THE PUBLICATION ASSOCIATED WITH THIS REMARK 3 ENTRY USE THE IMGT STANDARD NUMBERING SYSTEM. IN BOTH MOLECULES, REMARK 3 TRP47 ADOPTS AN ALTERNATIVE CONFORMATION. ONE CONFORMER AT 0.5 REMARK 3 OCCUPANCY FORMS A HYDROGEN BOND WITH A WATER MOLECULE AT 0.5 REMARK 3 OCCUPANCY,WHICH OCCUPIES PART OF THE SAME SPACE AS THE SECOND REMARK 3 TRP47 CONFORMER. REMARK 4 REMARK 4 4BUH COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 20-JUN-13. REMARK 100 THE DEPOSITION ID IS D_1290057311. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I02 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS IN XIA2 PACKAGE REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 109350 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.300 REMARK 200 RESOLUTION RANGE LOW (A) : 27.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 200 DATA REDUNDANCY : 9.100 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.37 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.7 REMARK 200 DATA REDUNDANCY IN SHELL : 7.80 REMARK 200 R MERGE FOR SHELL (I) : 0.87000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2YC1 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.99 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.05 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M MES PH6.5, 25% PEG 4000, PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 49.74750 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 38.21000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 49.74750 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 38.21000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 128 REMARK 465 GLY A 129 REMARK 465 GLY A 130 REMARK 465 SER A 131 REMARK 465 GLY A 132 REMARK 465 GLY A 133 REMARK 465 GLY A 134 REMARK 465 GLY A 135 REMARK 465 SER A 136 REMARK 465 GLY A 137 REMARK 465 GLY A 138 REMARK 465 GLY A 139 REMARK 465 GLY A 140 REMARK 465 SER A 141 REMARK 465 SER A 142 REMARK 465 ASP A 253 REMARK 465 TYR A 254 REMARK 465 LYS A 255 REMARK 465 ASP A 256 REMARK 465 ASP A 257 REMARK 465 ASP A 258 REMARK 465 ASP A 259 REMARK 465 LYS A 260 REMARK 465 ALA A 261 REMARK 465 ALA A 262 REMARK 465 ALA A 263 REMARK 465 HIS A 264 REMARK 465 HIS A 265 REMARK 465 HIS A 266 REMARK 465 HIS A 267 REMARK 465 HIS A 268 REMARK 465 HIS A 269 REMARK 465 GLN B 102 REMARK 465 LEU B 103 REMARK 465 TRP B 104 REMARK 465 ASN B 105 REMARK 465 SER B 106 REMARK 465 TYR B 107 REMARK 465 GLY B 127 REMARK 465 GLY B 128 REMARK 465 GLY B 129 REMARK 465 GLY B 130 REMARK 465 SER B 131 REMARK 465 GLY B 132 REMARK 465 GLY B 133 REMARK 465 GLY B 134 REMARK 465 GLY B 135 REMARK 465 SER B 136 REMARK 465 GLY B 137 REMARK 465 GLY B 138 REMARK 465 GLY B 139 REMARK 465 GLY B 140 REMARK 465 SER B 141 REMARK 465 SER B 142 REMARK 465 LYS B 255 REMARK 465 ASP B 256 REMARK 465 ASP B 257 REMARK 465 ASP B 258 REMARK 465 ASP B 259 REMARK 465 LYS B 260 REMARK 465 ALA B 261 REMARK 465 ALA B 262 REMARK 465 ALA B 263 REMARK 465 HIS B 264 REMARK 465 HIS B 265 REMARK 465 HIS B 266 REMARK 465 HIS B 267 REMARK 465 HIS B 268 REMARK 465 HIS B 269 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 23 NZ REMARK 470 LYS A 87 NZ REMARK 470 LYS A 192 NZ REMARK 470 ASP A 202 OD1 OD2 REMARK 470 ARG A 221 CZ NH1 NH2 REMARK 470 GLY A 252 C O REMARK 470 LYS B 23 CE NZ REMARK 470 GLU B 26 CD OE1 OE2 REMARK 470 LYS B 43 NZ REMARK 470 ARG B 77 NH1 NH2 REMARK 470 TYR B 108 CG CD1 CD2 CE1 CE2 CZ OH REMARK 470 TYR B 109 CZ OH REMARK 470 LYS B 118 NZ REMARK 470 LYS B 247 CE NZ REMARK 470 ASP B 253 OD1 OD2 REMARK 470 TYR B 254 C O CB CG CD1 CD2 CE1 REMARK 470 TYR B 254 CE2 CZ OH REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2224 O HOH B 2018 2.14 REMARK 500 OE2 GLU B 223 O HOH B 2167 2.16 REMARK 500 O HOH B 2060 O HOH B 2180 2.17 REMARK 500 O HOH A 2164 O HOH A 2165 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2083 O HOH A 2164 4546 2.13 REMARK 500 NH2 ARG A 196 O HOH B 2150 2556 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 106 -10.92 86.08 REMARK 500 ASN A 169 -93.01 -115.53 REMARK 500 ASN A 193 -47.02 75.44 REMARK 500 ASN A 194 10.42 -147.90 REMARK 500 ASN B 169 -93.17 -115.02 REMARK 500 ASN B 193 -45.06 73.33 REMARK 500 ASN B 194 14.00 -148.02 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1253 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1254 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PEG A 1255 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1255 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO B 1256 DBREF 4BUH A 1 269 PDB 4BUH 4BUH 1 269 DBREF 4BUH B 1 269 PDB 4BUH 4BUH 1 269 SEQRES 1 A 269 PCA VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 A 269 PRO GLY GLU SER LEU LYS ILE SER CYS LYS GLY SER GLU SEQRES 3 A 269 TYR SER PHE PRO ASN TYR TRP ILE ALA TRP VAL ARG GLN SEQRES 4 A 269 MET PRO GLY LYS GLY LEU GLU TRP MET GLY MET ILE TYR SEQRES 5 A 269 PRO GLY ASP SER ASP THR ARG TYR SER PRO SER PHE GLN SEQRES 6 A 269 GLY GLN VAL ASN ILE SER ALA ASP LYS SER SER ARG THR SEQRES 7 A 269 ALA PHE LEU GLU TRP SER SER LEU LYS ALA SER ASP SER SEQRES 8 A 269 ALA THR TYR PHE CYS ALA ARG LEU GLY GLY GLN LEU TRP SEQRES 9 A 269 ASN SER TYR TYR TYR TYR TYR TYR MET ASP VAL TRP GLY SEQRES 10 A 269 LYS GLY THR THR VAL THR VAL SER SER GLY GLY GLY GLY SEQRES 11 A 269 SER GLY GLY GLY GLY SER GLY GLY GLY GLY SER SER TYR SEQRES 12 A 269 GLU LEU THR GLN PRO PRO SER ALA SER GLY THR PRO GLY SEQRES 13 A 269 GLN ARG VAL THR ILE SER CYS SER GLY SER SER SER ASN SEQRES 14 A 269 ILE GLY GLY ASN THR VAL ASN TRP TYR GLN GLN VAL PRO SEQRES 15 A 269 GLY THR ALA PRO ARG LEU LEU ILE TYR LYS ASN ASN GLN SEQRES 16 A 269 ARG PRO SER GLY VAL PRO ASP ARG PHE SER GLY SER LYS SEQRES 17 A 269 SER GLY THR SER ALA SER LEU ALA ILE SER GLY LEU ARG SEQRES 18 A 269 SER GLU ASP GLU ALA ASP TYR TYR CYS GLU ALA TRP ASP SEQRES 19 A 269 GLY GLY LEU ARG GLY GLY VAL PHE GLY GLY GLY THR LYS SEQRES 20 A 269 LEU THR VAL LEU GLY ASP TYR LYS ASP ASP ASP ASP LYS SEQRES 21 A 269 ALA ALA ALA HIS HIS HIS HIS HIS HIS SEQRES 1 B 269 PCA VAL GLN LEU VAL GLN SER GLY ALA GLU VAL LYS LYS SEQRES 2 B 269 PRO GLY GLU SER LEU LYS ILE SER CYS LYS GLY SER GLU SEQRES 3 B 269 TYR SER PHE PRO ASN TYR TRP ILE ALA TRP VAL ARG GLN SEQRES 4 B 269 MET PRO GLY LYS GLY LEU GLU TRP MET GLY MET ILE TYR SEQRES 5 B 269 PRO GLY ASP SER ASP THR ARG TYR SER PRO SER PHE GLN SEQRES 6 B 269 GLY GLN VAL ASN ILE SER ALA ASP LYS SER SER ARG THR SEQRES 7 B 269 ALA PHE LEU GLU TRP SER SER LEU LYS ALA SER ASP SER SEQRES 8 B 269 ALA THR TYR PHE CYS ALA ARG LEU GLY GLY GLN LEU TRP SEQRES 9 B 269 ASN SER TYR TYR TYR TYR TYR TYR MET ASP VAL TRP GLY SEQRES 10 B 269 LYS GLY THR THR VAL THR VAL SER SER GLY GLY GLY GLY SEQRES 11 B 269 SER GLY GLY GLY GLY SER GLY GLY GLY GLY SER SER TYR SEQRES 12 B 269 GLU LEU THR GLN PRO PRO SER ALA SER GLY THR PRO GLY SEQRES 13 B 269 GLN ARG VAL THR ILE SER CYS SER GLY SER SER SER ASN SEQRES 14 B 269 ILE GLY GLY ASN THR VAL ASN TRP TYR GLN GLN VAL PRO SEQRES 15 B 269 GLY THR ALA PRO ARG LEU LEU ILE TYR LYS ASN ASN GLN SEQRES 16 B 269 ARG PRO SER GLY VAL PRO ASP ARG PHE SER GLY SER LYS SEQRES 17 B 269 SER GLY THR SER ALA SER LEU ALA ILE SER GLY LEU ARG SEQRES 18 B 269 SER GLU ASP GLU ALA ASP TYR TYR CYS GLU ALA TRP ASP SEQRES 19 B 269 GLY GLY LEU ARG GLY GLY VAL PHE GLY GLY GLY THR LYS SEQRES 20 B 269 LEU THR VAL LEU GLY ASP TYR LYS ASP ASP ASP ASP LYS SEQRES 21 B 269 ALA ALA ALA HIS HIS HIS HIS HIS HIS MODRES 4BUH PCA A 1 GLU PYROGLUTAMIC ACID MODRES 4BUH PCA B 1 GLU PYROGLUTAMIC ACID HET PCA A 1 8 HET PCA B 1 8 HET EDO A1253 4 HET EDO A1254 4 HET PEG A1255 14 HET EDO B1255 8 HET EDO B1256 4 HETNAM PCA PYROGLUTAMIC ACID HETNAM EDO 1,2-ETHANEDIOL HETNAM PEG DI(HYDROXYETHYL)ETHER HETSYN EDO ETHYLENE GLYCOL FORMUL 1 PCA 2(C5 H7 N O3) FORMUL 3 EDO 4(C2 H6 O2) FORMUL 5 PEG C4 H10 O3 FORMUL 8 HOH *409(H2 O) HELIX 1 1 SER A 28 TYR A 32 5 5 HELIX 2 2 LYS A 74 SER A 76 5 3 HELIX 3 3 LYS A 87 SER A 91 5 5 HELIX 4 4 ARG A 221 GLU A 225 5 5 HELIX 5 5 SER B 28 TYR B 32 5 5 HELIX 6 6 LYS B 74 SER B 76 5 3 HELIX 7 7 LYS B 87 SER B 91 5 5 HELIX 8 8 SER B 166 GLY B 172 1 7 HELIX 9 9 ARG B 221 GLU B 225 5 5 SHEET 1 AA 4 GLN A 3 GLN A 6 0 SHEET 2 AA 4 LEU A 18 SER A 25 -1 O LYS A 23 N VAL A 5 SHEET 3 AA 4 THR A 78 TRP A 83 -1 O ALA A 79 N CYS A 22 SHEET 4 AA 4 ASN A 69 ASP A 73 -1 O ASN A 69 N GLU A 82 SHEET 1 AB 4 GLU A 10 LYS A 12 0 SHEET 2 AB 4 THR A 120 VAL A 124 -1 O THR A 121 N GLU A 10 SHEET 3 AB 4 ALA A 92 LEU A 99 -1 O ALA A 92 N VAL A 122 SHEET 4 AB 4 MET A 113 TRP A 116 -1 N ASP A 114 O ARG A 98 SHEET 1 AC 6 GLU A 10 LYS A 12 0 SHEET 2 AC 6 THR A 120 VAL A 124 -1 O THR A 121 N GLU A 10 SHEET 3 AC 6 ALA A 92 LEU A 99 -1 O ALA A 92 N VAL A 122 SHEET 4 AC 6 ILE A 34 GLN A 39 -1 O ALA A 35 N ALA A 97 SHEET 5 AC 6 LEU A 45 ILE A 51 -1 O GLU A 46 N ARG A 38 SHEET 6 AC 6 THR A 58 TYR A 60 -1 O ARG A 59 N MET A 50 SHEET 1 AD 2 MET A 113 TRP A 116 0 SHEET 2 AD 2 ALA A 92 LEU A 99 -1 O ARG A 98 N ASP A 114 SHEET 1 AE 4 SER A 150 GLY A 153 0 SHEET 2 AE 4 THR A 246 VAL A 250 1 O LYS A 247 N ALA A 151 SHEET 3 AE 4 ALA A 226 ASP A 234 -1 O ALA A 226 N LEU A 248 SHEET 4 AE 4 GLY A 239 PHE A 242 1 O GLY A 239 N ASP A 234 SHEET 1 AF 5 SER A 150 GLY A 153 0 SHEET 2 AF 5 THR A 246 VAL A 250 1 O LYS A 247 N ALA A 151 SHEET 3 AF 5 ALA A 226 ASP A 234 -1 O ALA A 226 N LEU A 248 SHEET 4 AF 5 VAL A 175 GLN A 180 -1 O ASN A 176 N GLU A 231 SHEET 5 AF 5 ARG A 187 ILE A 190 -1 O ARG A 187 N GLN A 179 SHEET 1 AG 2 GLY A 239 PHE A 242 0 SHEET 2 AG 2 ALA A 226 ASP A 234 1 O ALA A 232 N VAL A 241 SHEET 1 AH 3 VAL A 159 SER A 164 0 SHEET 2 AH 3 SER A 212 ILE A 217 -1 O ALA A 213 N CYS A 163 SHEET 3 AH 3 PHE A 204 SER A 209 -1 O SER A 205 N ALA A 216 SHEET 1 BA 4 GLN B 3 GLN B 6 0 SHEET 2 BA 4 LEU B 18 SER B 25 -1 O LYS B 23 N VAL B 5 SHEET 3 BA 4 THR B 78 TRP B 83 -1 O ALA B 79 N CYS B 22 SHEET 4 BA 4 ASN B 69 ASP B 73 -1 O ASN B 69 N GLU B 82 SHEET 1 BB 4 GLU B 10 LYS B 12 0 SHEET 2 BB 4 THR B 120 VAL B 124 -1 O THR B 121 N GLU B 10 SHEET 3 BB 4 ALA B 92 LEU B 99 -1 O ALA B 92 N VAL B 122 SHEET 4 BB 4 MET B 113 TRP B 116 -1 N ASP B 114 O ARG B 98 SHEET 1 BC 6 GLU B 10 LYS B 12 0 SHEET 2 BC 6 THR B 120 VAL B 124 -1 O THR B 121 N GLU B 10 SHEET 3 BC 6 ALA B 92 LEU B 99 -1 O ALA B 92 N VAL B 122 SHEET 4 BC 6 ILE B 34 GLN B 39 -1 O ALA B 35 N ALA B 97 SHEET 5 BC 6 LEU B 45 ILE B 51 -1 O GLU B 46 N ARG B 38 SHEET 6 BC 6 THR B 58 TYR B 60 -1 O ARG B 59 N MET B 50 SHEET 1 BD 2 MET B 113 TRP B 116 0 SHEET 2 BD 2 ALA B 92 LEU B 99 -1 O ARG B 98 N ASP B 114 SHEET 1 BE 4 SER B 150 GLY B 153 0 SHEET 2 BE 4 THR B 246 VAL B 250 1 O LYS B 247 N ALA B 151 SHEET 3 BE 4 ALA B 226 ASP B 234 -1 O ALA B 226 N LEU B 248 SHEET 4 BE 4 GLY B 239 PHE B 242 1 O GLY B 239 N ASP B 234 SHEET 1 BF 5 SER B 150 GLY B 153 0 SHEET 2 BF 5 THR B 246 VAL B 250 1 O LYS B 247 N ALA B 151 SHEET 3 BF 5 ALA B 226 ASP B 234 -1 O ALA B 226 N LEU B 248 SHEET 4 BF 5 VAL B 175 GLN B 180 -1 O ASN B 176 N GLU B 231 SHEET 5 BF 5 ARG B 187 ILE B 190 -1 O ARG B 187 N GLN B 179 SHEET 1 BG 2 GLY B 239 PHE B 242 0 SHEET 2 BG 2 ALA B 226 ASP B 234 1 O ALA B 232 N VAL B 241 SHEET 1 BH 3 VAL B 159 SER B 164 0 SHEET 2 BH 3 SER B 212 ILE B 217 -1 O ALA B 213 N CYS B 163 SHEET 3 BH 3 PHE B 204 SER B 209 -1 O SER B 205 N ALA B 216 SSBOND 1 CYS A 22 CYS A 96 1555 1555 2.06 SSBOND 2 CYS A 163 CYS A 230 1555 1555 2.06 SSBOND 3 CYS B 22 CYS B 96 1555 1555 2.05 SSBOND 4 CYS B 163 CYS B 230 1555 1555 2.06 LINK C PCA A 1 N VAL A 2 1555 1555 1.32 LINK C PCA B 1 N VAL B 2 1555 1555 1.33 SITE 1 AC1 8 ARG A 238 THR A 249 HOH A2156 HOH A2224 SITE 2 AC1 8 HOH A2225 ALA B 9 GLU B 10 VAL B 11 SITE 1 AC2 6 TYR A 112 ASP A 114 HOH A2137 HOH A2139 SITE 2 AC2 6 ARG B 221 GLU B 223 SITE 1 AC3 6 GLU A 26 PRO B 155 ARG B 221 SER B 222 SITE 2 AC3 6 VAL B 250 GLY B 252 SITE 1 AC4 5 GLY A 101 GLN A 102 ASN A 105 TYR A 112 SITE 2 AC4 5 ARG B 221 SITE 1 AC5 7 THR B 58 SER B 150 ALA B 151 HOH B2076 SITE 2 AC5 7 HOH B2079 HOH B2133 HOH B2134 CRYST1 99.495 76.420 70.181 90.00 118.07 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010051 0.000000 0.005360 0.00000 SCALE2 0.000000 0.013086 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016148 0.00000 MTRIX1 1 0.515190 -0.088230 0.852520 -39.01060 1 MTRIX2 1 -0.089660 -0.994780 -0.048780 16.01486 1 MTRIX3 1 0.852370 -0.051310 -0.520410 70.77573 1 HETATM 1 N PCA A 1 -18.019 -6.822 25.413 1.00 25.58 N ANISOU 1 N PCA A 1 2354 3510 3855 247 312 100 N HETATM 2 CA PCA A 1 -16.773 -6.105 25.182 1.00 23.05 C ANISOU 2 CA PCA A 1 2230 3299 3229 214 147 80 C HETATM 3 CB PCA A 1 -16.877 -4.661 25.661 1.00 24.38 C ANISOU 3 CB PCA A 1 2306 3365 3592 162 181 118 C HETATM 4 CG PCA A 1 -18.181 -4.542 26.426 1.00 26.20 C ANISOU 4 CG PCA A 1 2380 3525 4051 94 312 -102 C HETATM 5 CD PCA A 1 -18.840 -5.870 26.164 1.00 27.48 C ANISOU 5 CD PCA A 1 2412 3634 4397 154 422 -130 C HETATM 6 OE PCA A 1 -19.983 -6.112 26.554 1.00 28.96 O ANISOU 6 OE PCA A 1 2427 3839 4737 38 287 -139 O HETATM 7 C PCA A 1 -15.595 -6.777 25.873 1.00 18.89 C ANISOU 7 C PCA A 1 2035 2820 2321 263 -33 186 C HETATM 8 O PCA A 1 -15.717 -7.369 26.949 1.00 18.36 O ANISOU 8 O PCA A 1 2014 2759 2203 183 -56 -134 O