HEADER TRANSFERASE 21-JUN-13 4BUP TITLE A NOVEL ROUTE TO PRODUCT SPECIFICITY IN THE SUV4-20 FAMILY OF HISTONE TITLE 2 H4K20 METHYLTRANSFERASES COMPND MOL_ID: 1; COMPND 2 MOLECULE: HISTONE-LYSINE N-METHYLTRANSFERASE SUV420H1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: SET DOMAIN, RESIDUES 70-336; COMPND 5 SYNONYM: SUPPRESSOR OF VARIEGATION 4-20 HOMOLOG 1, SU(VAR)4-20 COMPND 6 HOMOLOG 1, SUV4-20H1; COMPND 7 EC: 2.1.1.43; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: RIL; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX KEYWDS TRANSFERASE, EPIGENETICS, HISTONE EXPDTA X-RAY DIFFRACTION AUTHOR S.M.SOUTHALL,N.B.CRONIN,J.R.WILSON REVDAT 3 20-DEC-23 4BUP 1 REMARK LINK REVDAT 2 15-JAN-14 4BUP 1 JRNL REVDAT 1 02-OCT-13 4BUP 0 JRNL AUTH S.M.SOUTHALL,N.B.CRONIN,J.R.WILSON JRNL TITL A NOVEL ROUTE TO PRODUCT SPECIFICITY IN THE SUV4-20 FAMILY JRNL TITL 2 OF HISTONE H4K20 METHYLTRANSFERASES. JRNL REF NUCLEIC ACIDS RES. V. 42 661 2014 JRNL REFN ISSN 0305-1048 JRNL PMID 24049080 JRNL DOI 10.1093/NAR/GKT776 REMARK 2 REMARK 2 RESOLUTION. 2.17 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.17 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.64 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 3 NUMBER OF REFLECTIONS : 28969 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.201 REMARK 3 R VALUE (WORKING SET) : 0.198 REMARK 3 FREE R VALUE : 0.259 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1460 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 46.6509 - 4.6651 0.90 2781 173 0.1970 0.2318 REMARK 3 2 4.6651 - 3.7033 0.96 2970 149 0.1694 0.2313 REMARK 3 3 3.7033 - 3.2353 0.85 2552 139 0.1939 0.2588 REMARK 3 4 3.2353 - 2.9396 0.95 2832 171 0.2138 0.2597 REMARK 3 5 2.9396 - 2.7289 0.96 2916 138 0.2127 0.2835 REMARK 3 6 2.7289 - 2.5680 0.97 2958 134 0.2189 0.3179 REMARK 3 7 2.5680 - 2.4394 0.84 2510 120 0.2078 0.2939 REMARK 3 8 2.4394 - 2.3332 0.85 2572 136 0.2081 0.2693 REMARK 3 9 2.3332 - 2.2434 0.90 2714 156 0.2099 0.3020 REMARK 3 10 2.2434 - 2.1660 0.90 2704 144 0.2103 0.2876 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.280 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 26.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.26 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 30.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 3869 REMARK 3 ANGLE : 1.113 5194 REMARK 3 CHIRALITY : 0.081 545 REMARK 3 PLANARITY : 0.004 672 REMARK 3 DIHEDRAL : 16.880 1448 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4BUP COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-JUN-13. REMARK 100 THE DEPOSITION ID IS D_1290057392. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 77 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I04-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.92 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28977 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 46.600 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.9 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 13.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.17 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.24 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.00 REMARK 200 R MERGE FOR SHELL (I) : 0.40000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 4.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 4AU7 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.44 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, 10 % PEG 10K, PH 7.5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.00500 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 95 REMARK 465 ALA A 96 REMARK 465 PHE A 97 REMARK 465 PRO A 98 REMARK 465 SER A 99 REMARK 465 ARG A 100 REMARK 465 SER A 101 REMARK 465 SER A 102 REMARK 465 ARG A 103 REMARK 465 HIS A 104 REMARK 465 ILE A 105 REMARK 465 SER A 106 REMARK 465 LYS A 107 REMARK 465 ALA A 108 REMARK 465 ASP A 109 REMARK 465 SER A 110 REMARK 465 PHE A 111 REMARK 465 SER A 112 REMARK 465 HIS A 113 REMARK 465 ASN A 114 REMARK 465 ASN A 115 REMARK 465 PRO A 116 REMARK 465 VAL A 117 REMARK 465 ARG A 118 REMARK 465 PHE A 119 REMARK 465 ARG A 120 REMARK 465 PRO A 121 REMARK 465 ILE A 122 REMARK 465 LYS A 123 REMARK 465 GLY A 124 REMARK 465 GLY A 152 REMARK 465 GLU A 153 REMARK 465 TRP A 154 REMARK 465 ALA A 155 REMARK 465 ARG A 156 REMARK 465 HIS A 157 REMARK 465 TYR A 158 REMARK 465 PHE A 159 REMARK 465 ARG A 327 REMARK 465 GLY B 57 REMARK 465 SER B 58 REMARK 465 HIS B 59 REMARK 465 MET B 60 REMARK 465 THR B 94 REMARK 465 SER B 95 REMARK 465 ALA B 96 REMARK 465 PHE B 97 REMARK 465 PRO B 98 REMARK 465 SER B 99 REMARK 465 ARG B 100 REMARK 465 SER B 101 REMARK 465 SER B 102 REMARK 465 ARG B 103 REMARK 465 HIS B 104 REMARK 465 ILE B 105 REMARK 465 SER B 106 REMARK 465 LYS B 107 REMARK 465 ALA B 108 REMARK 465 ASP B 109 REMARK 465 SER B 110 REMARK 465 PHE B 111 REMARK 465 SER B 112 REMARK 465 HIS B 113 REMARK 465 ASN B 114 REMARK 465 ASN B 115 REMARK 465 PRO B 116 REMARK 465 VAL B 117 REMARK 465 ARG B 118 REMARK 465 PHE B 119 REMARK 465 ARG B 120 REMARK 465 PRO B 121 REMARK 465 SER B 326 REMARK 465 ARG B 327 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 125 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 128 CG CD OE1 OE2 REMARK 470 ILE B 122 CG1 CG2 CD1 REMARK 470 LYS B 123 CG CD CE NZ REMARK 470 ARG B 125 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 156 CG CD NE CZ NH1 NH2 REMARK 470 ARG B 268 CG CD NE CZ NH1 NH2 REMARK 470 LYS B 325 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 239 O HOH A 2068 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O GLY B 63 NH2 ARG B 318 1455 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 58 89.85 -171.61 REMARK 500 SER A 61 173.52 179.76 REMARK 500 THR A 89 -177.26 -62.93 REMARK 500 ASN A 93 -125.28 -129.07 REMARK 500 GLN A 126 -75.41 -71.93 REMARK 500 GLU A 128 -90.95 65.51 REMARK 500 ASN A 213 -2.54 79.89 REMARK 500 PHE A 304 61.16 -104.06 REMARK 500 SER B 62 -21.39 71.76 REMARK 500 LYS B 123 -53.36 -142.82 REMARK 500 ARG B 125 82.12 50.40 REMARK 500 ASN B 213 -5.71 73.24 REMARK 500 PHE B 304 59.28 -99.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2096 DISTANCE = 8.68 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 400 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 267 SG REMARK 620 2 CYS A 311 SG 108.9 REMARK 620 3 CYS A 313 SG 114.3 104.7 REMARK 620 4 CYS A 316 SG 101.7 115.6 112.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 400 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 267 SG REMARK 620 2 CYS B 311 SG 110.0 REMARK 620 3 CYS B 313 SG 116.5 102.4 REMARK 620 4 CYS B 316 SG 102.0 110.8 115.3 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAM A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SAM B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1327 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4AU7 RELATED DB: PDB REMARK 900 THE STRUCTURE OF THE SUV4-20H2 TERNARY COMPLEX WITH HISTONE H4 DBREF 4BUP A 61 327 UNP Q3U8K7 SV421_MOUSE 70 336 DBREF 4BUP B 61 327 UNP Q3U8K7 SV421_MOUSE 70 336 SEQADV 4BUP GLY A 57 UNP Q3U8K7 EXPRESSION TAG SEQADV 4BUP SER A 58 UNP Q3U8K7 EXPRESSION TAG SEQADV 4BUP HIS A 59 UNP Q3U8K7 EXPRESSION TAG SEQADV 4BUP MET A 60 UNP Q3U8K7 EXPRESSION TAG SEQADV 4BUP GLY B 57 UNP Q3U8K7 EXPRESSION TAG SEQADV 4BUP SER B 58 UNP Q3U8K7 EXPRESSION TAG SEQADV 4BUP HIS B 59 UNP Q3U8K7 EXPRESSION TAG SEQADV 4BUP MET B 60 UNP Q3U8K7 EXPRESSION TAG SEQRES 1 A 271 GLY SER HIS MET SER SER GLY MET SER ALA LYS GLU LEU SEQRES 2 A 271 CYS GLU ASN ASP ASP LEU ALA THR SER LEU VAL LEU ASP SEQRES 3 A 271 PRO TYR LEU GLY PHE GLN THR HIS LYS MET ASN THR SER SEQRES 4 A 271 ALA PHE PRO SER ARG SER SER ARG HIS ILE SER LYS ALA SEQRES 5 A 271 ASP SER PHE SER HIS ASN ASN PRO VAL ARG PHE ARG PRO SEQRES 6 A 271 ILE LYS GLY ARG GLN GLU GLU LEU LYS GLU VAL ILE GLU SEQRES 7 A 271 ARG PHE LYS LYS ASP GLU HIS LEU GLU LYS ALA PHE LYS SEQRES 8 A 271 CYS LEU THR SER GLY GLU TRP ALA ARG HIS TYR PHE LEU SEQRES 9 A 271 ASN LYS ASN LYS MET GLN GLU LYS LEU PHE LYS GLU HIS SEQRES 10 A 271 VAL PHE ILE TYR LEU ARG MET PHE ALA THR ASP SER GLY SEQRES 11 A 271 PHE GLU ILE LEU PRO CYS ASN ARG TYR SER SER GLU GLN SEQRES 12 A 271 ASN GLY ALA LYS ILE VAL ALA THR LYS GLU TRP LYS ARG SEQRES 13 A 271 ASN ASP LYS ILE GLU LEU LEU VAL GLY CYS ILE ALA GLU SEQRES 14 A 271 LEU SER GLU ILE GLU GLU ASN MET LEU LEU ARG HIS GLY SEQRES 15 A 271 GLU ASN ASP PHE SER VAL MET TYR SER THR ARG LYS ASN SEQRES 16 A 271 CYS ALA GLN LEU TRP LEU GLY PRO ALA ALA PHE ILE ASN SEQRES 17 A 271 HIS ASP CYS ARG PRO ASN CYS LYS PHE VAL SER THR GLY SEQRES 18 A 271 ARG ASP THR ALA CYS VAL LYS ALA LEU ARG ASP ILE GLU SEQRES 19 A 271 PRO GLY GLU GLU ILE SER CYS TYR TYR GLY ASP GLY PHE SEQRES 20 A 271 PHE GLY GLU ASN ASN GLU PHE CYS GLU CYS TYR THR CYS SEQRES 21 A 271 GLU ARG ARG GLY THR GLY ALA PHE LYS SER ARG SEQRES 1 B 271 GLY SER HIS MET SER SER GLY MET SER ALA LYS GLU LEU SEQRES 2 B 271 CYS GLU ASN ASP ASP LEU ALA THR SER LEU VAL LEU ASP SEQRES 3 B 271 PRO TYR LEU GLY PHE GLN THR HIS LYS MET ASN THR SER SEQRES 4 B 271 ALA PHE PRO SER ARG SER SER ARG HIS ILE SER LYS ALA SEQRES 5 B 271 ASP SER PHE SER HIS ASN ASN PRO VAL ARG PHE ARG PRO SEQRES 6 B 271 ILE LYS GLY ARG GLN GLU GLU LEU LYS GLU VAL ILE GLU SEQRES 7 B 271 ARG PHE LYS LYS ASP GLU HIS LEU GLU LYS ALA PHE LYS SEQRES 8 B 271 CYS LEU THR SER GLY GLU TRP ALA ARG HIS TYR PHE LEU SEQRES 9 B 271 ASN LYS ASN LYS MET GLN GLU LYS LEU PHE LYS GLU HIS SEQRES 10 B 271 VAL PHE ILE TYR LEU ARG MET PHE ALA THR ASP SER GLY SEQRES 11 B 271 PHE GLU ILE LEU PRO CYS ASN ARG TYR SER SER GLU GLN SEQRES 12 B 271 ASN GLY ALA LYS ILE VAL ALA THR LYS GLU TRP LYS ARG SEQRES 13 B 271 ASN ASP LYS ILE GLU LEU LEU VAL GLY CYS ILE ALA GLU SEQRES 14 B 271 LEU SER GLU ILE GLU GLU ASN MET LEU LEU ARG HIS GLY SEQRES 15 B 271 GLU ASN ASP PHE SER VAL MET TYR SER THR ARG LYS ASN SEQRES 16 B 271 CYS ALA GLN LEU TRP LEU GLY PRO ALA ALA PHE ILE ASN SEQRES 17 B 271 HIS ASP CYS ARG PRO ASN CYS LYS PHE VAL SER THR GLY SEQRES 18 B 271 ARG ASP THR ALA CYS VAL LYS ALA LEU ARG ASP ILE GLU SEQRES 19 B 271 PRO GLY GLU GLU ILE SER CYS TYR TYR GLY ASP GLY PHE SEQRES 20 B 271 PHE GLY GLU ASN ASN GLU PHE CYS GLU CYS TYR THR CYS SEQRES 21 B 271 GLU ARG ARG GLY THR GLY ALA PHE LYS SER ARG HET ZN A 400 1 HET SAM A 500 27 HET GOL A1327 6 HET ZN B 400 1 HET SAM B 500 27 HETNAM ZN ZINC ION HETNAM SAM S-ADENOSYLMETHIONINE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 ZN 2(ZN 2+) FORMUL 4 SAM 2(C15 H22 N6 O5 S) FORMUL 5 GOL C3 H8 O3 FORMUL 8 HOH *198(H2 O) HELIX 1 1 SER A 65 LEU A 81 1 17 HELIX 2 2 LEU A 81 GLY A 86 1 6 HELIX 3 3 GLU A 128 GLU A 140 1 13 HELIX 4 4 HIS A 141 THR A 150 1 10 HELIX 5 5 ASN A 163 ARG A 179 1 17 HELIX 6 6 MET A 180 ALA A 182 5 3 HELIX 7 7 SER A 227 LEU A 235 1 9 HELIX 8 8 GLY A 258 ILE A 263 5 6 HELIX 9 9 GLY A 305 GLU A 309 5 5 HELIX 10 10 CYS A 313 GLY A 320 1 8 HELIX 11 11 THR A 321 LYS A 325 5 5 HELIX 12 12 SER B 65 LEU B 81 1 17 HELIX 13 13 LEU B 81 GLY B 86 1 6 HELIX 14 14 ARG B 125 GLU B 140 1 16 HELIX 15 15 HIS B 141 THR B 150 1 10 HELIX 16 16 GLY B 152 PHE B 159 1 8 HELIX 17 17 LEU B 160 LYS B 162 5 3 HELIX 18 18 ASN B 163 ARG B 179 1 17 HELIX 19 19 MET B 180 ALA B 182 5 3 HELIX 20 20 SER B 227 LEU B 235 1 9 HELIX 21 21 GLY B 258 ILE B 263 5 6 HELIX 22 22 GLY B 305 GLU B 309 5 5 HELIX 23 23 CYS B 313 GLY B 320 1 8 HELIX 24 24 THR B 321 LYS B 325 5 5 SHEET 1 AA 2 PHE A 187 CYS A 192 0 SHEET 2 AA 2 GLY A 201 ALA A 206 -1 O GLY A 201 N CYS A 192 SHEET 1 AB 5 VAL A 244 SER A 247 0 SHEET 2 AB 5 CYS A 252 LEU A 257 -1 O CYS A 252 N SER A 247 SHEET 3 AB 5 LYS A 215 LEU A 226 -1 O CYS A 222 N LEU A 257 SHEET 4 AB 5 THR A 280 ALA A 285 -1 O ALA A 281 N GLY A 221 SHEET 5 AB 5 CYS A 271 SER A 275 -1 O LYS A 272 N LYS A 284 SHEET 1 AC 2 ASN A 264 HIS A 265 0 SHEET 2 AC 2 SER A 296 CYS A 297 1 N CYS A 297 O ASN A 264 SHEET 1 BA 2 PHE B 187 CYS B 192 0 SHEET 2 BA 2 GLY B 201 ALA B 206 -1 O GLY B 201 N CYS B 192 SHEET 1 BB 5 VAL B 244 SER B 247 0 SHEET 2 BB 5 CYS B 252 LEU B 257 -1 O CYS B 252 N SER B 247 SHEET 3 BB 5 LYS B 215 LEU B 226 -1 O CYS B 222 N LEU B 257 SHEET 4 BB 5 THR B 280 ALA B 285 -1 O ALA B 281 N GLY B 221 SHEET 5 BB 5 CYS B 271 SER B 275 -1 O LYS B 272 N LYS B 284 SHEET 1 BC 2 ASN B 264 HIS B 265 0 SHEET 2 BC 2 SER B 296 CYS B 297 1 N CYS B 297 O ASN B 264 LINK SG CYS A 267 ZN ZN A 400 1555 1555 2.36 LINK SG CYS A 311 ZN ZN A 400 1555 1555 2.35 LINK SG CYS A 313 ZN ZN A 400 1555 1555 2.27 LINK SG CYS A 316 ZN ZN A 400 1555 1555 2.37 LINK SG CYS B 267 ZN ZN B 400 1555 1555 2.35 LINK SG CYS B 311 ZN ZN B 400 1555 1555 2.42 LINK SG CYS B 313 ZN ZN B 400 1555 1555 2.15 LINK SG CYS B 316 ZN ZN B 400 1555 1555 2.57 CISPEP 1 SER A 61 SER A 62 0 -1.67 CISPEP 2 GLU A 127 GLU A 128 0 -1.10 SITE 1 AC1 4 CYS A 267 CYS A 311 CYS A 313 CYS A 316 SITE 1 AC2 18 HIS A 90 TYR A 195 SER A 197 GLU A 198 SITE 2 AC2 18 GLY A 201 ALA A 202 PHE A 242 ALA A 261 SITE 3 AC2 18 ILE A 263 ASN A 264 HIS A 265 TYR A 299 SITE 4 AC2 18 PHE A 304 CYS A 311 GLU A 312 GOL A1327 SITE 5 AC2 18 HOH A2019 HOH A2050 SITE 1 AC3 4 CYS B 267 CYS B 311 CYS B 313 CYS B 316 SITE 1 AC4 17 HIS B 90 TYR B 195 SER B 197 GLU B 198 SITE 2 AC4 17 GLY B 201 ALA B 202 PHE B 242 ALA B 261 SITE 3 AC4 17 ILE B 263 ASN B 264 HIS B 265 TYR B 299 SITE 4 AC4 17 PHE B 304 CYS B 311 GLU B 312 CYS B 313 SITE 5 AC4 17 HOH B2014 SITE 1 AC5 9 SER A 243 MET A 245 TRP A 256 ALA A 260 SITE 2 AC5 9 ALA A 261 ILE A 263 PHE A 273 SAM A 500 SITE 3 AC5 9 HOH A2095 CRYST1 46.310 50.010 129.400 90.00 92.82 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021594 0.000000 0.001064 0.00000 SCALE2 0.000000 0.019996 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007737 0.00000