HEADER TRANSPORT PROTEIN 30-JUL-13 4C00 TITLE CRYSTAL STRUCTURE OF TAMA FROM E. COLI COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSLOCATION AND ASSEMBLY MODULE TAMA; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 22-577; COMPND 5 SYNONYM: AUTOTRANSPORTER ASSEMBLY FACTOR TAMA; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 562; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VARIANT: OMP3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET22B KEYWDS TRANSPORT PROTEIN, YTFM, POLYPEPTIDE TRANSPORT-ASSOCIATED, KEYWDS 2 AUTOTRANSPORTER BIOGENESIS, AUTOTRANSPORTER ASSEMBLY, OUTER MEMBRANE KEYWDS 3 PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR F.GRUSS,F.ZAEHRINGER,R.P.JAKOB,B.M.BURMANN,S.HILLER,T.MAIER REVDAT 4 20-DEC-23 4C00 1 REMARK REVDAT 3 20-NOV-13 4C00 1 JRNL REVDAT 2 02-OCT-13 4C00 1 JRNL REVDAT 1 25-SEP-13 4C00 0 JRNL AUTH F.GRUSS,F.ZAEHRINGER,R.P.JAKOB,B.M.BURMANN,S.HILLER,T.MAIER JRNL TITL THE STRUCTURAL BASIS OF AUTOTRANSPORTER TRANSLOCATION BY JRNL TITL 2 TAMA JRNL REF NAT.STRUCT.MOL.BIOL. V. 20 1318 2013 JRNL REFN ISSN 1545-9993 JRNL PMID 24056943 JRNL DOI 10.1038/NSMB.2689 REMARK 2 REMARK 2 RESOLUTION. 2.25 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.25 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.27 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 55920 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.191 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 3.500 REMARK 3 FREE R VALUE TEST SET COUNT : 1946 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 74.3093 - 5.4223 0.99 4174 155 0.2161 0.2343 REMARK 3 2 5.4223 - 4.3040 1.00 3993 148 0.1679 0.1790 REMARK 3 3 4.3040 - 3.7600 0.99 3946 122 0.1748 0.2005 REMARK 3 4 3.7600 - 3.4162 1.00 3901 144 0.1675 0.1823 REMARK 3 5 3.4162 - 3.1713 0.99 3889 145 0.1775 0.2131 REMARK 3 6 3.1713 - 2.9844 0.99 3883 135 0.1827 0.2211 REMARK 3 7 2.9844 - 2.8349 0.99 3831 155 0.1896 0.2492 REMARK 3 8 2.8349 - 2.7115 0.99 3846 142 0.1902 0.2313 REMARK 3 9 2.7115 - 2.6071 0.99 3841 114 0.1930 0.2015 REMARK 3 10 2.6071 - 2.5171 1.00 3853 148 0.1949 0.2318 REMARK 3 11 2.5171 - 2.4384 0.98 3812 137 0.2139 0.2273 REMARK 3 12 2.4384 - 2.3687 0.97 3748 142 0.2303 0.2899 REMARK 3 13 2.3687 - 2.3063 0.96 3687 112 0.2426 0.2849 REMARK 3 14 2.3063 - 2.2501 0.93 3570 147 0.2736 0.3371 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.270 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 22.460 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 41.15 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 77.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.003 4908 REMARK 3 ANGLE : 0.956 6587 REMARK 3 CHIRALITY : 0.050 666 REMARK 3 PLANARITY : 0.003 836 REMARK 3 DIHEDRAL : 14.020 1952 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 25 THROUGH 103 ) REMARK 3 ORIGIN FOR THE GROUP (A): -7.8502 16.7902 -6.1972 REMARK 3 T TENSOR REMARK 3 T11: 1.7225 T22: 1.3152 REMARK 3 T33: 1.6972 T12: -0.3730 REMARK 3 T13: -0.2892 T23: 0.1844 REMARK 3 L TENSOR REMARK 3 L11: 0.0668 L22: 0.1353 REMARK 3 L33: 0.0156 L12: -0.0932 REMARK 3 L13: 0.0324 L23: -0.0464 REMARK 3 S TENSOR REMARK 3 S11: 0.4128 S12: 0.3167 S13: 0.3816 REMARK 3 S21: -0.1713 S22: -0.3198 S23: -0.3467 REMARK 3 S31: -0.4291 S32: 0.0167 S33: -0.1436 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 104 THROUGH 188 ) REMARK 3 ORIGIN FOR THE GROUP (A): 10.9742 12.6101 19.5325 REMARK 3 T TENSOR REMARK 3 T11: 1.1239 T22: 0.8386 REMARK 3 T33: 1.6289 T12: -0.5301 REMARK 3 T13: 0.0176 T23: 0.1445 REMARK 3 L TENSOR REMARK 3 L11: 2.7756 L22: 1.1458 REMARK 3 L33: 0.4594 L12: 1.5755 REMARK 3 L13: 0.1780 L23: 0.4370 REMARK 3 S TENSOR REMARK 3 S11: -0.1255 S12: 0.1731 S13: -0.3451 REMARK 3 S21: -0.0582 S22: 0.0239 S23: 0.4206 REMARK 3 S31: 0.3665 S32: -0.3373 S33: 0.1522 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 189 THROUGH 263) REMARK 3 ORIGIN FOR THE GROUP (A): 37.5340 31.3502 19.7560 REMARK 3 T TENSOR REMARK 3 T11: 0.6190 T22: 0.4231 REMARK 3 T33: 0.6163 T12: -0.1353 REMARK 3 T13: -0.1160 T23: 0.0248 REMARK 3 L TENSOR REMARK 3 L11: 2.3900 L22: 5.3806 REMARK 3 L33: 1.2804 L12: 1.1019 REMARK 3 L13: -0.5297 L23: -0.6017 REMARK 3 S TENSOR REMARK 3 S11: 0.0420 S12: -0.1142 S13: -0.7544 REMARK 3 S21: -0.1284 S22: 0.1744 S23: 0.1484 REMARK 3 S31: 0.8610 S32: -0.3276 S33: -0.1893 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 264 THROUGH 577 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.5576 67.5028 14.0638 REMARK 3 T TENSOR REMARK 3 T11: 0.2798 T22: 0.3586 REMARK 3 T33: 0.2908 T12: -0.0062 REMARK 3 T13: -0.0118 T23: -0.0390 REMARK 3 L TENSOR REMARK 3 L11: 2.0726 L22: 0.7208 REMARK 3 L33: 0.7510 L12: -0.8787 REMARK 3 L13: 0.1202 L23: -0.4277 REMARK 3 S TENSOR REMARK 3 S11: 0.0915 S12: 0.0707 S13: -0.0616 REMARK 3 S21: -0.0266 S22: 0.0065 S23: 0.0537 REMARK 3 S31: -0.0285 S32: -0.1424 S33: -0.0986 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: POTRA DOMAIN 1 AND C-TERMINUS EXHIBIT REMARK 3 HIGHER FLEXIBILITY RESP. DISORDER. STRUCTURE OF ISOLATED POTRA REMARK 3 DOMAINS FROM PDB 4BZA GUIDED MODEL BUILDING OF POTRA DOMAIN 1 REMARK 4 REMARK 4 4C00 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 30-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1290057862. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAY-13 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06DA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 2M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 55995 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.250 REMARK 200 RESOLUTION RANGE LOW (A) : 74.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 7.290 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.7400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.25 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.39 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.3 REMARK 200 DATA REDUNDANCY IN SHELL : 7.04 REMARK 200 R MERGE FOR SHELL (I) : 0.85000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.390 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRIES 2QDZ AND 4BZA REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 73.63 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.66 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: IMIDAZOLE PH 6.0, NA ACETATE, TRIS, REMARK 280 NACL, BETA-OG, DMPC, CHAPSO REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 38.73500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 130.53000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.73500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 130.53000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 19 REMARK 465 ILE A 20 REMARK 465 GLN A 21 REMARK 465 ALA A 22 REMARK 465 ASN A 23 REMARK 465 VAL A 24 REMARK 465 ARG A 84 REMARK 465 PRO A 85 REMARK 465 PRO A 86 REMARK 465 PRO A 87 REMARK 465 LYS A 88 REMARK 465 LYS A 89 REMARK 465 GLY A 90 REMARK 465 ARG A 91 REMARK 465 GLN A 92 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 32 -61.20 -95.92 REMARK 500 SER A 44 38.82 -82.97 REMARK 500 SER A 48 -84.59 -87.85 REMARK 500 THR A 109 50.79 -113.12 REMARK 500 ASP A 180 87.30 -153.35 REMARK 500 ASN A 292 -179.41 -171.00 REMARK 500 ASN A 322 75.59 -150.32 REMARK 500 ASN A 340 -113.53 53.83 REMARK 500 ASP A 441 -21.84 67.47 REMARK 500 SER A 475 -81.60 -126.93 REMARK 500 ASP A 533 63.29 -152.34 REMARK 500 GLU A 576 -65.28 68.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2224 DISTANCE = 9.10 ANGSTROMS REMARK 525 HOH A2225 DISTANCE = 7.72 ANGSTROMS REMARK 525 HOH A2226 DISTANCE = 6.35 ANGSTROMS REMARK 600 REMARK 600 HETEROGEN REMARK 600 REMARK 600 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE (MC3): LIPIDS REMARK 600 IN STRUCTURE WERE BUILT AS FRAGMENTS OF DMPC, WHICH WAS REMARK 600 USED IN BICELLE CRYSTALLIZATION REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 MC3 A 603 REMARK 610 MC3 A 604 REMARK 610 MC3 A 605 REMARK 610 MC3 A 606 REMARK 610 MC3 A 607 REMARK 610 MC3 A 608 REMARK 610 MC3 A 609 REMARK 610 MC3 A 610 REMARK 610 MC3 A 611 REMARK 610 MC3 A 612 REMARK 610 MC3 A 613 REMARK 610 MC3 A 614 REMARK 610 MC3 A 615 REMARK 610 MC3 A 616 REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 700 REMARK 700 SHEET REMARK 700 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MC3 A 601 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MC3 A 602 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MC3 A 603 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MC3 A 604 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MC3 A 605 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MC3 A 606 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MC3 A 607 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MC3 A 608 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MC3 A 609 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MC3 A 610 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MC3 A 611 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MC3 A 612 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MC3 A 613 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MC3 A 614 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MC3 A 615 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MC3 A 616 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 801 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 802 REMARK 800 REMARK 800 SITE_IDENTIFIER: CC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 803 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BZA RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF TAMA POTRA DOMAINS 1-3 FROM E. COLI REMARK 999 REMARK 999 SEQUENCE REMARK 999 WITHOUT N-TERMINAL SIGNAL SEQUENCE (AA. 1-21),COMPRISES AA. REMARK 999 22-577,ADDITIONAL N-TERMINAL GLY-ILE-GLN DBREF 4C00 A 22 577 UNP P0ADE4 TAMA_ECOLI 22 577 SEQADV 4C00 GLY A 19 UNP P0ADE4 EXPRESSION TAG SEQADV 4C00 ILE A 20 UNP P0ADE4 EXPRESSION TAG SEQADV 4C00 GLN A 21 UNP P0ADE4 EXPRESSION TAG SEQRES 1 A 559 GLY ILE GLN ALA ASN VAL ARG LEU GLN VAL GLU GLY LEU SEQRES 2 A 559 SER GLY GLN LEU GLU LYS ASN VAL ARG ALA GLN LEU SER SEQRES 3 A 559 THR ILE GLU SER ASP GLU VAL THR PRO ASP ARG ARG PHE SEQRES 4 A 559 ARG ALA ARG VAL ASP ASP ALA ILE ARG GLU GLY LEU LYS SEQRES 5 A 559 ALA LEU GLY TYR TYR GLN PRO THR ILE GLU PHE ASP LEU SEQRES 6 A 559 ARG PRO PRO PRO LYS LYS GLY ARG GLN VAL LEU ILE ALA SEQRES 7 A 559 LYS VAL THR PRO GLY VAL PRO VAL LEU ILE GLY GLY THR SEQRES 8 A 559 ASP VAL VAL LEU ARG GLY GLY ALA ARG THR ASP LYS ASP SEQRES 9 A 559 TYR LEU LYS LEU LEU ASP THR ARG PRO ALA ILE GLY THR SEQRES 10 A 559 VAL LEU ASN GLN GLY ASP TYR GLU ASN PHE LYS LYS SER SEQRES 11 A 559 LEU THR SER ILE ALA LEU ARG LYS GLY TYR PHE ASP SER SEQRES 12 A 559 GLU PHE THR LYS ALA GLN LEU GLY ILE ALA LEU GLY LEU SEQRES 13 A 559 HIS LYS ALA PHE TRP ASP ILE ASP TYR ASN SER GLY GLU SEQRES 14 A 559 ARG TYR ARG PHE GLY HIS VAL THR PHE GLU GLY SER GLN SEQRES 15 A 559 ILE ARG ASP GLU TYR LEU GLN ASN LEU VAL PRO PHE LYS SEQRES 16 A 559 GLU GLY ASP GLU TYR GLU SER LYS ASP LEU ALA GLU LEU SEQRES 17 A 559 ASN ARG ARG LEU SER ALA THR GLY TRP PHE ASN SER VAL SEQRES 18 A 559 VAL VAL ALA PRO GLN PHE ASP LYS ALA ARG GLU THR LYS SEQRES 19 A 559 VAL LEU PRO LEU THR GLY VAL VAL SER PRO ARG THR GLU SEQRES 20 A 559 ASN THR ILE GLU THR GLY VAL GLY TYR SER THR ASP VAL SEQRES 21 A 559 GLY PRO ARG VAL LYS ALA THR TRP LYS LYS PRO TRP MET SEQRES 22 A 559 ASN SER TYR GLY HIS SER LEU THR THR SER THR SER ILE SEQRES 23 A 559 SER ALA PRO GLU GLN THR LEU ASP PHE SER TYR LYS MET SEQRES 24 A 559 PRO LEU LEU LYS ASN PRO LEU GLU GLN TYR TYR LEU VAL SEQRES 25 A 559 GLN GLY GLY PHE LYS ARG THR ASP LEU ASN ASP THR GLU SEQRES 26 A 559 SER ASP SER THR THR LEU VAL ALA SER ARG TYR TRP ASP SEQRES 27 A 559 LEU SER SER GLY TRP GLN ARG ALA ILE ASN LEU ARG TRP SEQRES 28 A 559 SER LEU ASP HIS PHE THR GLN GLY GLU ILE THR ASN THR SEQRES 29 A 559 THR MET LEU PHE TYR PRO GLY VAL MET ILE SER ARG THR SEQRES 30 A 559 ARG SER ARG GLY GLY LEU MET PRO THR TRP GLY ASP SER SEQRES 31 A 559 GLN ARG TYR SER ILE ASP TYR SER ASN THR ALA TRP GLY SEQRES 32 A 559 SER ASP VAL ASP PHE SER VAL PHE GLN ALA GLN ASN VAL SEQRES 33 A 559 TRP ILE ARG THR LEU TYR ASP ARG HIS ARG PHE VAL THR SEQRES 34 A 559 ARG GLY THR LEU GLY TRP ILE GLU THR GLY ASP PHE ASP SEQRES 35 A 559 LYS VAL PRO PRO ASP LEU ARG PHE PHE ALA GLY GLY ASP SEQRES 36 A 559 ARG SER ILE ARG GLY TYR LYS TYR LYS SER ILE ALA PRO SEQRES 37 A 559 LYS TYR ALA ASN GLY ASP LEU LYS GLY ALA SER LYS LEU SEQRES 38 A 559 ILE THR GLY SER LEU GLU TYR GLN TYR ASN VAL THR GLY SEQRES 39 A 559 LYS TRP TRP GLY ALA VAL PHE VAL ASP SER GLY GLU ALA SEQRES 40 A 559 VAL SER ASP ILE ARG ARG SER ASP PHE LYS THR GLY THR SEQRES 41 A 559 GLY VAL GLY VAL ARG TRP GLU SER PRO VAL GLY PRO ILE SEQRES 42 A 559 LYS LEU ASP PHE ALA VAL PRO VAL ALA ASP LYS ASP GLU SEQRES 43 A 559 HIS GLY LEU GLN PHE TYR ILE GLY LEU GLY PRO GLU LEU HET MC3 A 601 118 HET MC3 A 602 118 HET MC3 A 603 99 HET MC3 A 604 30 HET MC3 A 605 15 HET MC3 A 606 57 HET MC3 A 607 21 HET MC3 A 608 95 HET MC3 A 609 25 HET MC3 A 610 49 HET MC3 A 611 107 HET MC3 A 612 58 HET MC3 A 613 71 HET MC3 A 614 78 HET MC3 A 615 24 HET MC3 A 616 23 HET ACT A 701 7 HET ACT A 702 7 HET CL A 801 1 HET CL A 802 1 HET CL A 803 1 HETNAM MC3 1,2-DIMYRISTOYL-RAC-GLYCERO-3-PHOSPHOCHOLINE HETNAM ACT ACETATE ION HETNAM CL CHLORIDE ION FORMUL 2 MC3 16(C36 H72 N O8 P) FORMUL 18 ACT 2(C2 H3 O2 1-) FORMUL 20 CL 3(CL 1-) FORMUL 23 HOH *226(H2 O) HELIX 1 1 GLY A 33 SER A 44 1 12 HELIX 2 2 PHE A 57 ALA A 71 1 15 HELIX 3 3 GLY A 115 THR A 119 5 5 HELIX 4 4 LYS A 121 ASP A 128 1 8 HELIX 5 5 GLN A 139 LYS A 156 1 18 HELIX 6 6 ASP A 203 ASN A 208 1 6 HELIX 7 7 SER A 220 THR A 233 1 14 HELIX 8 8 PHE A 245 ALA A 248 5 4 SHEET 1 AA 3 LEU A 26 GLU A 29 0 SHEET 2 AA 3 LEU A 94 THR A 99 1 O LEU A 94 N GLN A 27 SHEET 3 AA 3 THR A 78 ASP A 82 -1 O THR A 78 N THR A 99 SHEET 1 AB 3 LEU A 105 ARG A 114 0 SHEET 2 AB 3 LYS A 176 ASN A 184 1 O ALA A 177 N GLY A 107 SHEET 3 AB 3 GLU A 162 ALA A 171 -1 O GLU A 162 N ASN A 184 SHEET 1 AC 3 HIS A 193 GLU A 197 0 SHEET 2 AC 3 LEU A 256 PRO A 262 1 N LEU A 256 O HIS A 193 SHEET 3 AC 3 PHE A 236 PRO A 243 -1 N ASN A 237 O SER A 261 SHEET 1 AE17 THR A 267 THR A 276 0 SHEET 2 AE17 PRO A 280 LYS A 288 -1 O ARG A 281 N SER A 275 SHEET 3 AE17 SER A 297 SER A 305 -1 O LEU A 298 N LYS A 288 SHEET 4 AE17 GLU A 308 PRO A 318 -1 O GLU A 308 N SER A 305 SHEET 5 AE17 GLN A 326 LEU A 339 -1 O TYR A 328 N MET A 317 SHEET 6 AE17 THR A 342 LEU A 357 -1 O THR A 342 N LEU A 339 SHEET 7 AE17 TRP A 361 GLN A 376 -1 O ARG A 363 N TRP A 355 SHEET 8 AE17 ILE A 379 ARG A 398 -1 O ILE A 379 N GLN A 376 SHEET 9 AE17 THR A 404 SER A 416 -1 O TRP A 405 N ARG A 398 SHEET 10 AE17 PHE A 426 LEU A 439 -1 O PHE A 426 N SER A 416 SHEET 11 AE17 ARG A 442 THR A 456 -1 O HIS A 443 N LEU A 439 SHEET 12 AE17 SER A 497 THR A 511 -1 O LEU A 499 N GLY A 452 SHEET 13 AE17 TRP A 514 VAL A 526 -1 O TRP A 514 N THR A 511 SHEET 14 AE17 LYS A 535 SER A 546 -1 O LYS A 535 N GLY A 523 SHEET 15 AE17 GLY A 549 PRO A 558 -1 O GLY A 549 N SER A 546 SHEET 16 AE17 GLN A 568 LEU A 573 -1 O GLN A 568 N ALA A 556 SHEET 17 AE17 THR A 267 SER A 275 -1 O TYR A 274 N ILE A 571 SITE 1 AC1 14 VAL A 282 ALA A 284 ILE A 304 SER A 305 SITE 2 AC1 14 ALA A 306 GLN A 309 LEU A 311 ARG A 442 SITE 3 AC1 14 HIS A 443 TYR A 506 TYR A 508 MC3 A 608 SITE 4 AC1 14 MC3 A 611 HOH A2221 SITE 1 AC2 8 ASN A 292 SER A 293 TYR A 294 TYR A 315 SITE 2 AC2 8 GLN A 331 GLY A 332 MC3 A 611 MC3 A 613 SITE 1 AC3 10 ASN A 433 THR A 447 ARG A 448 GLY A 449 SITE 2 AC3 10 ILE A 500 SER A 503 SER A 522 PHE A 534 SITE 3 AC3 10 THR A 536 MC3 A 616 SITE 1 AC4 2 PHE A 334 ARG A 336 SITE 1 AC5 2 TRP A 514 TRP A 544 SITE 1 AC6 4 THR A 270 VAL A 272 LEU A 573 MC3 A 608 SITE 1 AC7 3 SER A 359 TRP A 361 ARG A 363 SITE 1 AC8 5 TYR A 440 HIS A 443 TYR A 506 MC3 A 601 SITE 2 AC8 5 MC3 A 606 SITE 1 AC9 2 MC3 A 612 MC3 A 615 SITE 1 BC1 4 MET A 384 TRP A 420 GLY A 421 MC3 A 614 SITE 1 BC2 12 GLU A 265 TRP A 286 LYS A 288 TRP A 290 SITE 2 BC2 12 MET A 291 LEU A 298 GLY A 516 LEU A 567 SITE 3 BC2 12 MC3 A 601 MC3 A 602 HOH A2070 HOH A2220 SITE 1 BC3 6 GLU A 325 TRP A 355 LEU A 357 ARG A 363 SITE 2 BC3 6 VAL A 390 MC3 A 609 SITE 1 BC4 9 TYR A 294 HIS A 296 TRP A 453 LYS A 498 SITE 2 BC4 9 SER A 527 ASP A 528 ILE A 529 ARG A 530 SITE 3 BC4 9 MC3 A 602 SITE 1 BC5 4 ARG A 396 TRP A 405 ARG A 437 MC3 A 610 SITE 1 BC6 7 TYR A 328 ARG A 353 ILE A 529 ARG A 530 SITE 2 BC6 7 SER A 532 MC3 A 609 CL A 802 SITE 1 BC7 3 ARG A 394 GLN A 409 MC3 A 603 SITE 1 BC8 5 ARG A 228 LEU A 324 LEU A 357 SER A 358 SITE 2 BC8 5 HOH A2101 SITE 1 BC9 3 SER A 297 THR A 299 SER A 314 SITE 1 CC1 3 ASP A 460 ARG A 467 TYR A 488 SITE 1 CC2 5 LEU A 319 LEU A 320 ARG A 530 MC3 A 615 SITE 2 CC2 5 HOH A2040 SITE 1 CC3 2 ARG A 368 HOH A2128 CRYST1 77.470 261.060 57.840 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012908 0.000000 0.000000 0.00000 SCALE2 0.000000 0.003831 0.000000 0.00000 SCALE3 0.000000 0.000000 0.017289 0.00000