HEADER TRANSFERASE 31-JUL-13 4C04 TITLE CRYSTAL STRUCTURE OF M. MUSCULUS PROTEIN ARGININE METHYLTRANSFERASE TITLE 2 PRMT6 WITH INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN ARGININE N-METHYLTRANSFERASE 6; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: HISTONE-ARGININE N-METHYLTRANSFERASE PRMT6,; COMPND 5 EC: 2.1.1.-, 2.1.1.125 SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MUS MUSCULUS; SOURCE 3 ORGANISM_COMMON: HOUSE MOUSE; SOURCE 4 ORGANISM_TAXID: 10090 KEYWDS TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.BONNEFOND,V.CURA,N.TROFFER-CHARLIER,J.MAILLIOT,J.M.WURTZ, AUTHOR 2 J.CAVARELLI REVDAT 4 20-DEC-23 4C04 1 REMARK REVDAT 3 12-AUG-15 4C04 1 JRNL REVDAT 2 01-JUL-15 4C04 1 JRNL REVDAT 1 30-JUL-14 4C04 0 JRNL AUTH L.BONNEFOND,J.STOJKO,J.MAILLIOT,N.TROFFER-CHARLIER,V.CURA, JRNL AUTH 2 J.M.WURTZ,S.CIANFERANI,J.CAVARELLI JRNL TITL FUNCTIONAL INSIGHTS FROM HIGH RESOLUTION STRUCTURES OF MOUSE JRNL TITL 2 PROTEIN ARGININE METHYLTRANSFERASE 6. JRNL REF J.STRUCT.BIOL. V. 191 175 2015 JRNL REFN ISSN 1047-8477 JRNL PMID 26094878 JRNL DOI 10.1016/J.JSB.2015.06.017 REMARK 2 REMARK 2 RESOLUTION. 1.58 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.58 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.79 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.370 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 3 NUMBER OF REFLECTIONS : 49522 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.153 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.185 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2478 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.7993 - 4.1286 1.00 2664 139 0.1394 0.1703 REMARK 3 2 4.1286 - 3.2778 1.00 2615 140 0.1335 0.1621 REMARK 3 3 3.2778 - 2.8637 1.00 2655 137 0.1526 0.1908 REMARK 3 4 2.8637 - 2.6020 1.00 2619 139 0.1477 0.1726 REMARK 3 5 2.6020 - 2.4156 1.00 2628 139 0.1451 0.1863 REMARK 3 6 2.4156 - 2.2732 1.00 2629 138 0.1359 0.1594 REMARK 3 7 2.2732 - 2.1594 1.00 2618 135 0.1401 0.1706 REMARK 3 8 2.1594 - 2.0654 1.00 2602 137 0.1467 0.1896 REMARK 3 9 2.0654 - 1.9859 1.00 2626 140 0.1533 0.1873 REMARK 3 10 1.9859 - 1.9174 1.00 2610 140 0.1575 0.2077 REMARK 3 11 1.9174 - 1.8574 1.00 2621 134 0.1704 0.1985 REMARK 3 12 1.8574 - 1.8043 1.00 2624 140 0.1762 0.2236 REMARK 3 13 1.8043 - 1.7568 1.00 2603 137 0.1825 0.2378 REMARK 3 14 1.7568 - 1.7140 1.00 2623 137 0.1958 0.2247 REMARK 3 15 1.7140 - 1.6750 1.00 2610 138 0.2090 0.2767 REMARK 3 16 1.6750 - 1.6394 1.00 2622 138 0.2231 0.2730 REMARK 3 17 1.6394 - 1.6066 1.00 2620 137 0.2405 0.3117 REMARK 3 18 1.6066 - 1.5762 0.94 2455 133 0.2759 0.3148 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.790 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.010 2714 REMARK 3 ANGLE : 1.321 3702 REMARK 3 CHIRALITY : 0.050 412 REMARK 3 PLANARITY : 0.007 475 REMARK 3 DIHEDRAL : 15.246 1001 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 48:54) REMARK 3 ORIGIN FOR THE GROUP (A): 41.0643 -18.8291 -0.8727 REMARK 3 T TENSOR REMARK 3 T11: 0.8419 T22: 0.6681 REMARK 3 T33: 0.4515 T12: -0.0185 REMARK 3 T13: 0.0033 T23: -0.0005 REMARK 3 L TENSOR REMARK 3 L11: 2.4230 L22: 3.0106 REMARK 3 L33: 8.0412 L12: -2.5228 REMARK 3 L13: -4.1750 L23: 4.9096 REMARK 3 S TENSOR REMARK 3 S11: 0.4020 S12: -0.1371 S13: -0.0481 REMARK 3 S21: 1.2589 S22: -0.3810 S23: -0.1000 REMARK 3 S31: -2.0177 S32: 0.2938 S33: -0.0302 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 55:147) REMARK 3 ORIGIN FOR THE GROUP (A): 17.0734 -17.7921 7.5105 REMARK 3 T TENSOR REMARK 3 T11: 0.1455 T22: 0.1671 REMARK 3 T33: 0.1984 T12: 0.0028 REMARK 3 T13: 0.0135 T23: -0.0044 REMARK 3 L TENSOR REMARK 3 L11: 2.5567 L22: 1.9992 REMARK 3 L33: 3.2833 L12: -0.5270 REMARK 3 L13: 0.9054 L23: 0.2746 REMARK 3 S TENSOR REMARK 3 S11: 0.1472 S12: 0.0913 S13: -0.2863 REMARK 3 S21: 0.0301 S22: -0.0415 S23: 0.0959 REMARK 3 S31: 0.1825 S32: -0.0411 S33: -0.0858 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 148:201) REMARK 3 ORIGIN FOR THE GROUP (A): 11.9845 -4.4550 3.9741 REMARK 3 T TENSOR REMARK 3 T11: 0.1411 T22: 0.1986 REMARK 3 T33: 0.1703 T12: 0.0475 REMARK 3 T13: -0.0057 T23: 0.0038 REMARK 3 L TENSOR REMARK 3 L11: 2.3431 L22: 4.7166 REMARK 3 L33: 1.7436 L12: 2.5926 REMARK 3 L13: 1.2410 L23: 2.0559 REMARK 3 S TENSOR REMARK 3 S11: 0.0332 S12: 0.1196 S13: -0.0652 REMARK 3 S21: -0.1091 S22: -0.0932 S23: 0.2123 REMARK 3 S31: 0.0023 S32: -0.0909 S33: 0.0695 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 202:240) REMARK 3 ORIGIN FOR THE GROUP (A): 44.0458 18.7296 11.8138 REMARK 3 T TENSOR REMARK 3 T11: 0.2210 T22: 0.3398 REMARK 3 T33: 0.2532 T12: 0.0199 REMARK 3 T13: 0.0145 T23: -0.0030 REMARK 3 L TENSOR REMARK 3 L11: 7.1987 L22: 0.5001 REMARK 3 L33: 1.1681 L12: 2.6754 REMARK 3 L13: 3.5119 L23: 1.0639 REMARK 3 S TENSOR REMARK 3 S11: 0.0634 S12: 0.2388 S13: 0.1419 REMARK 3 S21: 0.0746 S22: 0.0085 S23: 0.0504 REMARK 3 S31: 0.0091 S32: 0.0707 S33: -0.0695 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 241:258) REMARK 3 ORIGIN FOR THE GROUP (A): 21.4129 11.7384 16.0002 REMARK 3 T TENSOR REMARK 3 T11: 0.1640 T22: 0.0616 REMARK 3 T33: 0.0813 T12: -0.0312 REMARK 3 T13: 0.0566 T23: 0.0561 REMARK 3 L TENSOR REMARK 3 L11: 3.1809 L22: 6.9754 REMARK 3 L33: 7.5476 L12: -0.0601 REMARK 3 L13: 2.0370 L23: 2.2624 REMARK 3 S TENSOR REMARK 3 S11: -0.0089 S12: -0.3864 S13: 0.1964 REMARK 3 S21: 0.3146 S22: -0.0806 S23: -0.0167 REMARK 3 S31: -0.0469 S32: 0.0335 S33: 0.0568 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 259:342) REMARK 3 ORIGIN FOR THE GROUP (A): 18.5263 11.0187 11.9899 REMARK 3 T TENSOR REMARK 3 T11: 0.1353 T22: 0.1553 REMARK 3 T33: 0.1259 T12: 0.0188 REMARK 3 T13: 0.0344 T23: 0.0148 REMARK 3 L TENSOR REMARK 3 L11: 1.7407 L22: 2.6133 REMARK 3 L33: 1.2725 L12: 0.6698 REMARK 3 L13: -0.1607 L23: 0.1257 REMARK 3 S TENSOR REMARK 3 S11: 0.0439 S12: 0.0264 S13: 0.1635 REMARK 3 S21: 0.1092 S22: -0.0167 S23: 0.1632 REMARK 3 S31: -0.1106 S32: -0.0420 S33: -0.0206 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 343:376) REMARK 3 ORIGIN FOR THE GROUP (A): 21.5127 16.2851 0.6340 REMARK 3 T TENSOR REMARK 3 T11: 0.1557 T22: 0.2145 REMARK 3 T33: 0.1804 T12: 0.0101 REMARK 3 T13: 0.0435 T23: 0.0834 REMARK 3 L TENSOR REMARK 3 L11: 3.5849 L22: 2.5110 REMARK 3 L33: 7.9889 L12: 0.9301 REMARK 3 L13: 0.5008 L23: 2.1165 REMARK 3 S TENSOR REMARK 3 S11: 0.1587 S12: 0.2942 S13: 0.1182 REMARK 3 S21: -0.4298 S22: -0.1868 S23: 0.0208 REMARK 3 S31: -0.2569 S32: -0.1623 S33: 0.0070 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4C04 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 31-JUL-13. REMARK 100 THE DEPOSITION ID IS D_1290057866. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-NOV-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SOLEIL REMARK 200 BEAMLINE : PROXIMA 1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9801 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49529 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.580 REMARK 200 RESOLUTION RANGE LOW (A) : 33.790 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.6 REMARK 200 DATA REDUNDANCY : 5.200 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.8400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.58 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.6 REMARK 200 DATA REDUNDANCY IN SHELL : 5.00 REMARK 200 R MERGE FOR SHELL (I) : 0.87000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.770 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2Y1W REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.54 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM HEPES PH 7.0, 200 MM MGCL2, 20% REMARK 280 PEG 3350 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 41 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 3555 -Y,X+1/2,Z+1/4 REMARK 290 4555 Y+1/2,-X,Z+3/4 REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X,-Y,Z REMARK 290 7555 -Y+1/2,X,Z+3/4 REMARK 290 8555 Y,-X+1/2,Z+1/4 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 39.41750 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 39.41750 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.23600 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 39.41750 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 29.61800 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 39.41750 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 88.85400 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 39.41750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 39.41750 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 59.23600 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 39.41750 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 88.85400 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 39.41750 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 29.61800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27240 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -40.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 78.83500 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 LEU A 3 REMARK 465 SER A 4 REMARK 465 LYS A 5 REMARK 465 LYS A 6 REMARK 465 ARG A 7 REMARK 465 LYS A 8 REMARK 465 LEU A 9 REMARK 465 GLU A 10 REMARK 465 SER A 11 REMARK 465 GLY A 12 REMARK 465 ASP A 13 REMARK 465 SER A 14 REMARK 465 GLY A 15 REMARK 465 GLY A 16 REMARK 465 ALA A 17 REMARK 465 GLY A 18 REMARK 465 ALA A 19 REMARK 465 GLY A 20 REMARK 465 GLY A 21 REMARK 465 GLU A 22 REMARK 465 GLY A 23 REMARK 465 ALA A 24 REMARK 465 GLU A 25 REMARK 465 GLU A 26 REMARK 465 GLU A 27 REMARK 465 ASN A 28 REMARK 465 GLY A 29 REMARK 465 GLY A 30 REMARK 465 GLU A 31 REMARK 465 GLN A 32 REMARK 465 GLU A 33 REMARK 465 ALA A 34 REMARK 465 ALA A 35 REMARK 465 PRO A 36 REMARK 465 PRO A 37 REMARK 465 ARG A 38 REMARK 465 PRO A 39 REMARK 465 ARG A 40 REMARK 465 ARG A 41 REMARK 465 THR A 42 REMARK 465 LYS A 43 REMARK 465 SER A 44 REMARK 465 GLU A 45 REMARK 465 ARG A 46 REMARK 465 ASP A 47 REMARK 465 ASP A 303 REMARK 465 SER A 304 REMARK 465 GLU A 305 REMARK 465 ASP A 378 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 2087 O HOH A 2088 2.12 REMARK 500 O HOH A 2170 O HOH A 2171 2.15 REMARK 500 OE1 GLN A 122 O HOH A 2049 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 164 -50.44 67.56 REMARK 500 LYS A 322 -141.33 51.34 REMARK 500 ASN A 352 106.65 -163.65 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SFG A 1377 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4C03 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF M. MUSCULUS PROTEIN ARGININE METHYLTRANSFERASE REMARK 900 PRMT6 REDUCED REMARK 900 RELATED ID: 4C05 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF M. MUSCULUS PROTEIN ARGININE METHYLTRANSFERASE REMARK 900 PRMT6 WITH SAH REMARK 900 RELATED ID: 4C06 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF M. MUSCULUS PROTEIN ARGININE METHYLTRANSFERASE REMARK 900 PRMT6 WITH MGCL2 REMARK 900 RELATED ID: 4C07 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF M. MUSCULUS PROTEIN ARGININE METHYLTRANSFERASE REMARK 900 PRMT6 WITH CACL2 AT 1.5 ANGSTROMS REMARK 900 RELATED ID: 4C08 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF M. MUSCULUS PROTEIN ARGININE METHYLTRANSFERASE REMARK 900 PRMT6 WITH CACL2 AT 1.34 ANGSTROMS DBREF 4C04 A 1 378 UNP Q6NZB1 ANM6_MOUSE 1 378 SEQADV 4C04 ARG A -3 UNP Q6NZB1 EXPRESSION TAG SEQADV 4C04 GLY A -2 UNP Q6NZB1 EXPRESSION TAG SEQADV 4C04 SER A -1 UNP Q6NZB1 EXPRESSION TAG SEQADV 4C04 HIS A 0 UNP Q6NZB1 EXPRESSION TAG SEQADV 4C04 LEU A 315 UNP Q6NZB1 PHE 315 VARIANT SEQRES 1 A 382 ARG GLY SER HIS MET SER LEU SER LYS LYS ARG LYS LEU SEQRES 2 A 382 GLU SER GLY ASP SER GLY GLY ALA GLY ALA GLY GLY GLU SEQRES 3 A 382 GLY ALA GLU GLU GLU ASN GLY GLY GLU GLN GLU ALA ALA SEQRES 4 A 382 PRO PRO ARG PRO ARG ARG THR LYS SER GLU ARG ASP GLN SEQRES 5 A 382 LEU TYR TYR GLU CYS TYR SER ASP VAL SER VAL HIS GLU SEQRES 6 A 382 GLU MET ILE ALA ASP GLN VAL ARG THR GLU ALA TYR ARG SEQRES 7 A 382 LEU GLY ILE LEU LYS ASN TRP ALA ALA LEU ARG GLY LYS SEQRES 8 A 382 THR VAL LEU ASP VAL GLY ALA GLY THR GLY ILE LEU SER SEQRES 9 A 382 ILE PHE CYS ALA GLN ALA GLY ALA ARG ARG VAL TYR ALA SEQRES 10 A 382 VAL GLU ALA SER ALA ILE TRP GLN GLN ALA ARG GLU VAL SEQRES 11 A 382 VAL ARG LEU ASN GLY LEU GLU ASP ARG VAL HIS VAL LEU SEQRES 12 A 382 PRO GLY PRO VAL GLU THR VAL GLU LEU PRO GLU ARG VAL SEQRES 13 A 382 ASP ALA ILE VAL SER GLU TRP MET GLY TYR GLY LEU LEU SEQRES 14 A 382 HIS GLU SER MET LEU SER SER VAL LEU HIS ALA ARG THR SEQRES 15 A 382 LYS TRP LEU LYS GLU GLY GLY LEU LEU LEU PRO ALA SER SEQRES 16 A 382 ALA GLU LEU PHE VAL ALA PRO ILE SER ASP GLN MET LEU SEQRES 17 A 382 GLU TRP ARG LEU GLY PHE TRP SER GLN VAL LYS GLN HIS SEQRES 18 A 382 TYR GLY VAL ASP MET SER CYS MET GLU SER PHE ALA THR SEQRES 19 A 382 ARG CYS LEU MET GLY HIS SER GLU ILE VAL VAL GLN ASP SEQRES 20 A 382 LEU SER GLY GLU ASP VAL LEU ALA ARG PRO GLN ARG PHE SEQRES 21 A 382 ALA GLN LEU GLU LEU ALA ARG ALA GLY LEU GLU GLN GLU SEQRES 22 A 382 LEU GLU ALA GLY VAL GLY GLY ARG PHE ARG CYS SER CYS SEQRES 23 A 382 TYR GLY SER ALA PRO LEU HIS GLY PHE ALA VAL TRP PHE SEQRES 24 A 382 GLN VAL THR PHE PRO GLY GLY ASP SER GLU LYS PRO LEU SEQRES 25 A 382 VAL LEU SER THR SER PRO LEU HIS PRO ALA THR HIS TRP SEQRES 26 A 382 LYS GLN ALA LEU LEU TYR LEU ASN GLU PRO VAL PRO VAL SEQRES 27 A 382 GLU GLN ASP THR ASP ILE SER GLY GLU ILE THR LEU LEU SEQRES 28 A 382 PRO SER PRO ASP ASN PRO ARG ARG LEU ARG ILE LEU LEU SEQRES 29 A 382 ARG TYR LYS VAL GLY ASP HIS GLU GLU LYS THR LYS ASP SEQRES 30 A 382 PHE ALA MET GLU ASP HET SFG A1377 48 HETNAM SFG SINEFUNGIN HETSYN SFG ADENOSYL-ORNITHINE FORMUL 2 SFG C15 H23 N7 O5 FORMUL 3 HOH *224(H2 O) HELIX 1 1 CYS A 53 ALA A 65 1 13 HELIX 2 2 ASP A 66 LYS A 79 1 14 HELIX 3 3 ASN A 80 ARG A 85 1 6 HELIX 4 4 GLY A 97 ALA A 106 1 10 HELIX 5 5 ILE A 119 ASN A 130 1 12 HELIX 6 6 MET A 169 TRP A 180 1 12 HELIX 7 7 ASP A 201 GLY A 219 1 19 HELIX 8 8 CYS A 224 GLY A 235 1 12 HELIX 9 9 SER A 245 ASP A 248 5 4 HELIX 10 10 GLY A 265 GLY A 273 1 9 SHEET 1 AA 5 VAL A 136 PRO A 140 0 SHEET 2 AA 5 ARG A 110 GLU A 115 1 O VAL A 111 N HIS A 137 SHEET 3 AA 5 THR A 88 VAL A 92 1 O VAL A 89 N TYR A 112 SHEET 4 AA 5 VAL A 152 VAL A 156 1 N ASP A 153 O THR A 88 SHEET 5 AA 5 LEU A 181 LEU A 188 1 N LYS A 182 O VAL A 152 SHEET 1 AB 4 VAL A 240 GLN A 242 0 SHEET 2 AB 4 GLN A 323 VAL A 334 -1 O GLN A 323 N GLN A 242 SHEET 3 AB 4 ALA A 286 PHE A 299 -1 O ALA A 286 N VAL A 334 SHEET 4 AB 4 LEU A 308 SER A 311 -1 O LEU A 308 N PHE A 299 SHEET 1 AC 5 VAL A 240 GLN A 242 0 SHEET 2 AC 5 GLN A 323 VAL A 334 -1 O GLN A 323 N GLN A 242 SHEET 3 AC 5 ALA A 286 PHE A 299 -1 O ALA A 286 N VAL A 334 SHEET 4 AC 5 SER A 191 ILE A 199 -1 O SER A 191 N THR A 298 SHEET 5 AC 5 GLN A 254 GLU A 260 -1 O GLN A 254 N VAL A 196 SHEET 1 AD 2 LEU A 308 SER A 311 0 SHEET 2 AD 2 ALA A 286 PHE A 299 -1 O VAL A 297 N LEU A 310 SHEET 1 AE 4 VAL A 274 SER A 281 0 SHEET 2 AE 4 ASP A 339 SER A 349 -1 O ILE A 340 N CYS A 280 SHEET 3 AE 4 ASN A 352 VAL A 364 -1 N ASN A 352 O SER A 349 SHEET 4 AE 4 LYS A 370 ALA A 375 -1 O LYS A 370 N TYR A 362 SSBOND 1 CYS A 53 CYS A 232 1555 6655 2.04 CISPEP 1 LEU A 188 PRO A 189 0 -11.84 SITE 1 AC1 20 HIS A 60 MET A 63 ARG A 69 GLY A 93 SITE 2 AC1 20 ALA A 94 GLY A 95 LEU A 99 GLU A 115 SITE 3 AC1 20 ALA A 116 SER A 117 PRO A 142 VAL A 143 SITE 4 AC1 20 GLU A 144 GLU A 158 MET A 169 SER A 172 SITE 5 AC1 20 HOH A2009 HOH A2035 HOH A2036 HOH A2083 CRYST1 78.835 78.835 118.472 90.00 90.00 90.00 I 41 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012685 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012685 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008441 0.00000