HEADER HYDROLASE 12-AUG-13 4C1F TITLE CRYSTAL STRUCTURE OF THE METALLO-BETA-LACTAMASE IMP-1 WITH L-CAPTOPRIL COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-LACTAMASE IMP-1; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 19-245; COMPND 5 SYNONYM: IMP-1, BLAIMP, BETA-LACTAMASE TYPE II, PENICILLINASE; COMPND 6 EC: 3.5.2.6; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SERRATIA MARCESCENS; SOURCE 3 ORGANISM_TAXID: 615; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VARIANT: PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET-26B; SOURCE 10 OTHER_DETAILS: PLASMID DERIVED NON-GENOMIC. KEYWDS HYDROLASE, MBL, METALLO-BETA-LACTAMASE, ANTIBIOTIC RESISTANCE EXPDTA X-RAY DIFFRACTION AUTHOR D.ZOLLMAN,J.BREM,M.A.MCDONOUGH,S.S.VAN BERKEL,C.J.SCHOFIELD REVDAT 6 20-DEC-23 4C1F 1 REMARK LINK REVDAT 5 21-FEB-18 4C1F 1 AUTHOR JRNL REVDAT 4 13-JAN-16 4C1F 1 JRNL REVDAT 3 25-NOV-15 4C1F 1 JRNL REVDAT 2 17-SEP-14 4C1F 1 TITLE REMARK MASTER REVDAT 1 27-AUG-14 4C1F 0 JRNL AUTH J.BREM,S.S.VAN BERKEL,D.ZOLLMAN,S.Y.LEE,O.GILEADI, JRNL AUTH 2 P.J.MCHUGH,T.R.WALSH,M.A.MCDONOUGH,C.J.SCHOFIELD JRNL TITL STRUCTURAL BASIS OF METALLO-BETA-LACTAMASE INHIBITION BY JRNL TITL 2 CAPTOPRIL STEREOISOMERS. JRNL REF ANTIMICROB. AGENTS V. 60 142 2015 JRNL REF 2 CHEMOTHER. JRNL REFN ESSN 1098-6596 JRNL PMID 26482303 JRNL DOI 10.1128/AAC.01335-15 REMARK 2 REMARK 2 RESOLUTION. 2.01 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.01 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 52.57 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 36155 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.224 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1805 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 52.5863 - 4.7251 0.99 2841 156 0.2006 0.2241 REMARK 3 2 4.7251 - 3.7508 1.00 2694 146 0.1648 0.2104 REMARK 3 3 3.7508 - 3.2768 1.00 2659 153 0.1673 0.2191 REMARK 3 4 3.2768 - 2.9772 1.00 2653 138 0.1835 0.1888 REMARK 3 5 2.9772 - 2.7638 1.00 2608 149 0.1890 0.2280 REMARK 3 6 2.7638 - 2.6009 1.00 2616 146 0.1925 0.2396 REMARK 3 7 2.6009 - 2.4706 1.00 2619 128 0.1901 0.2360 REMARK 3 8 2.4706 - 2.3631 1.00 2633 139 0.2020 0.2453 REMARK 3 9 2.3631 - 2.2721 1.00 2609 110 0.1906 0.2582 REMARK 3 10 2.2721 - 2.1937 1.00 2628 125 0.1928 0.2753 REMARK 3 11 2.1937 - 2.1251 1.00 2622 141 0.1900 0.2663 REMARK 3 12 2.1251 - 2.0644 1.00 2574 136 0.1753 0.2059 REMARK 3 13 2.0644 - 2.0100 1.00 2594 138 0.1698 0.2261 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.050 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 27.43 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.00 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.004 3459 REMARK 3 ANGLE : 0.766 4717 REMARK 3 CHIRALITY : 0.043 527 REMARK 3 PLANARITY : 0.003 591 REMARK 3 DIHEDRAL : 12.655 1194 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CHAIN B IS MORE DISORDERED THAN CHAIN A REMARK 3 AS INDICATED BY THE AVERAGE B-FACTORS - CHAIN A 22.3 VS CHAIN B REMARK 3 70.7. CONFORMATION OF RAMACHANDRAN OUTLIERS 59 ASN AND 66 ASP REMARK 3 VALIDATED BY CLEAR ELECTRON DENSITY IN CHAIN A. REMARK 4 REMARK 4 4C1F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1290057785. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAY-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : DIAMOND REMARK 200 BEAMLINE : I03 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.96260 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 36158 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.010 REMARK 200 RESOLUTION RANGE LOW (A) : 52.500 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 6.300 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.01 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.08 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.70 REMARK 200 R MERGE FOR SHELL (I) : 0.35000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 1DD6 REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.32 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.05 M LI2SO4, 0.1 M SODIUM ACETATE, REMARK 280 PH 4.5, 23 % W/V PEG 8000, 1MM DTT. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 96.81000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 27.31000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.95500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 27.31000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 96.81000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 24.95500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ALA A 19 REMARK 465 GLU A 20 REMARK 465 LYS A 240 REMARK 465 PRO A 241 REMARK 465 SER A 242 REMARK 465 LYS A 243 REMARK 465 PRO A 244 REMARK 465 SER A 245 REMARK 465 ASN A 246 REMARK 465 ALA B 19 REMARK 465 GLU B 20 REMARK 465 SER B 21 REMARK 465 LYS B 239 REMARK 465 LYS B 240 REMARK 465 PRO B 241 REMARK 465 SER B 242 REMARK 465 LYS B 243 REMARK 465 PRO B 244 REMARK 465 SER B 245 REMARK 465 ASN B 246 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 21 OG REMARK 470 GLU A 28 CG CD OE1 OE2 REMARK 470 LYS A 72 CD CE NZ REMARK 470 LYS A 199 CE NZ REMARK 470 LYS A 225 CE NZ REMARK 470 LYS A 233 CE NZ REMARK 470 ASP B 24 CG OD1 OD2 REMARK 470 GLU B 28 CG CD OE1 OE2 REMARK 470 GLU B 41 CD OE1 OE2 REMARK 470 GLU B 42 CG CD OE1 OE2 REMARK 470 ASN B 59 CG OD1 ND2 REMARK 470 ALA B 60 CB REMARK 470 GLU B 61 CD OE1 OE2 REMARK 470 LYS B 72 CD CE NZ REMARK 470 LYS B 76 CD CE NZ REMARK 470 GLU B 83 CG CD OE1 OE2 REMARK 470 LYS B 87 CG CD CE NZ REMARK 470 LYS B 89 CG CD CE NZ REMARK 470 SER B 98 OG REMARK 470 SER B 109 OG REMARK 470 ARG B 110 NE CZ NH1 NH2 REMARK 470 GLU B 118 CG CD OE1 OE2 REMARK 470 GLU B 122 CG CD OE1 OE2 REMARK 470 LEU B 123 CG CD1 CD2 REMARK 470 LYS B 125 CG CD CE NZ REMARK 470 LYS B 126 CD CE NZ REMARK 470 ASP B 127 CG OD1 OD2 REMARK 470 SER B 135 OG REMARK 470 SER B 137 OG REMARK 470 LYS B 145 CB CG CD CE NZ REMARK 470 LYS B 147 CD CE NZ REMARK 470 LYS B 170 CE NZ REMARK 470 LYS B 196 CB CG CD CE NZ REMARK 470 LYS B 204 CG CD CE NZ REMARK 470 LYS B 207 CG CD CE NZ REMARK 470 LYS B 209 CG CD CE NZ REMARK 470 LEU B 228 CD1 CD2 REMARK 470 GLU B 229 CD OE1 OE2 REMARK 470 LYS B 233 CG CD CE NZ REMARK 470 SER B 238 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 59 -126.70 55.30 REMARK 500 ASP A 66 146.85 83.30 REMARK 500 ASN B 59 -124.74 69.34 REMARK 500 ASP B 66 157.62 68.64 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2027 DISTANCE = 6.79 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 95 NE2 REMARK 620 2 HIS A 97 ND1 98.6 REMARK 620 3 HIS A 157 NE2 107.3 106.3 REMARK 620 4 X8Z A 300 S 123.9 118.5 101.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 99 OD2 REMARK 620 2 CYS A 176 SG 108.4 REMARK 620 3 HIS A 215 NE2 97.6 103.4 REMARK 620 4 X8Z A 300 S 113.8 118.1 113.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 95 NE2 REMARK 620 2 HIS B 97 ND1 87.6 REMARK 620 3 HIS B 157 NE2 89.7 93.8 REMARK 620 4 HOH B2004 O 125.8 107.7 138.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 99 OD2 REMARK 620 2 HIS B 215 NE2 96.6 REMARK 620 N 1 REMARK 630 REMARK 630 MOLECULE TYPE: NULL REMARK 630 MOLECULE NAME: L-CAPTOPRIL REMARK 630 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 630 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 630 REMARK 630 M RES C SSSEQI REMARK 630 X8Z A 300 REMARK 630 SOURCE: NULL REMARK 630 TAXONOMY: NULL REMARK 630 SUBCOMP: PRO CC8 REMARK 630 DETAILS: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE X8Z A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 400 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 502 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4BZ3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE METALLO-BETA-LACTAMASE VIM-2 REMARK 900 RELATED ID: 4C09 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE METALLO-BETA-LACTAMASE BCII WITH L- REMARK 900 CAPTOPRIL REMARK 900 RELATED ID: 4C1C RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE METALLO-BETA-LACTAMASE BCII WITH D- REMARK 900 CAPTOPRIL REMARK 900 RELATED ID: 4C1D RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE METALLO-BETA-LACTAMASE VIM-2 WITH L- REMARK 900 CAPTOPRIL REMARK 900 RELATED ID: 4C1E RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE METALLO-BETA-LACTAMASE VIM-2 WITH D- REMARK 900 CAPTOPRIL REMARK 900 RELATED ID: 4C1G RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE METALLO-BETA-LACTAMASE IMP-1 WITH D- REMARK 900 CAPTOPRIL REMARK 900 RELATED ID: 4C1H RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A BETA LACTAMASE IN COMPLEX WITH AN INHIBITOR DBREF 4C1F A 19 246 UNP P52699 BLAB_SERMA 19 246 DBREF 4C1F B 19 246 UNP P52699 BLAB_SERMA 19 246 SEQRES 1 A 228 ALA GLU SER LEU PRO ASP LEU LYS ILE GLU LYS LEU ASP SEQRES 2 A 228 GLU GLY VAL TYR VAL HIS THR SER PHE GLU GLU VAL ASN SEQRES 3 A 228 GLY TRP GLY VAL VAL PRO LYS HIS GLY LEU VAL VAL LEU SEQRES 4 A 228 VAL ASN ALA GLU ALA TYR LEU ILE ASP THR PRO PHE THR SEQRES 5 A 228 ALA LYS ASP THR GLU LYS LEU VAL THR TRP PHE VAL GLU SEQRES 6 A 228 ARG GLY TYR LYS ILE LYS GLY SER ILE SER SER HIS PHE SEQRES 7 A 228 HIS SER ASP SER THR GLY GLY ILE GLU TRP LEU ASN SER SEQRES 8 A 228 ARG SER ILE PRO THR TYR ALA SER GLU LEU THR ASN GLU SEQRES 9 A 228 LEU LEU LYS LYS ASP GLY LYS VAL GLN ALA THR ASN SER SEQRES 10 A 228 PHE SER GLY VAL ASN TYR TRP LEU VAL LYS ASN LYS ILE SEQRES 11 A 228 GLU VAL PHE TYR PRO GLY PRO GLY HIS THR PRO ASP ASN SEQRES 12 A 228 VAL VAL VAL TRP LEU PRO GLU ARG LYS ILE LEU PHE GLY SEQRES 13 A 228 GLY CYS PHE ILE LYS PRO TYR GLY LEU GLY ASN LEU GLY SEQRES 14 A 228 ASP ALA ASN ILE GLU ALA TRP PRO LYS SER ALA LYS LEU SEQRES 15 A 228 LEU LYS SER LYS TYR GLY LYS ALA LYS LEU VAL VAL PRO SEQRES 16 A 228 SER HIS SER GLU VAL GLY ASP ALA SER LEU LEU LYS LEU SEQRES 17 A 228 THR LEU GLU GLN ALA VAL LYS GLY LEU ASN GLU SER LYS SEQRES 18 A 228 LYS PRO SER LYS PRO SER ASN SEQRES 1 B 228 ALA GLU SER LEU PRO ASP LEU LYS ILE GLU LYS LEU ASP SEQRES 2 B 228 GLU GLY VAL TYR VAL HIS THR SER PHE GLU GLU VAL ASN SEQRES 3 B 228 GLY TRP GLY VAL VAL PRO LYS HIS GLY LEU VAL VAL LEU SEQRES 4 B 228 VAL ASN ALA GLU ALA TYR LEU ILE ASP THR PRO PHE THR SEQRES 5 B 228 ALA LYS ASP THR GLU LYS LEU VAL THR TRP PHE VAL GLU SEQRES 6 B 228 ARG GLY TYR LYS ILE LYS GLY SER ILE SER SER HIS PHE SEQRES 7 B 228 HIS SER ASP SER THR GLY GLY ILE GLU TRP LEU ASN SER SEQRES 8 B 228 ARG SER ILE PRO THR TYR ALA SER GLU LEU THR ASN GLU SEQRES 9 B 228 LEU LEU LYS LYS ASP GLY LYS VAL GLN ALA THR ASN SER SEQRES 10 B 228 PHE SER GLY VAL ASN TYR TRP LEU VAL LYS ASN LYS ILE SEQRES 11 B 228 GLU VAL PHE TYR PRO GLY PRO GLY HIS THR PRO ASP ASN SEQRES 12 B 228 VAL VAL VAL TRP LEU PRO GLU ARG LYS ILE LEU PHE GLY SEQRES 13 B 228 GLY CYS PHE ILE LYS PRO TYR GLY LEU GLY ASN LEU GLY SEQRES 14 B 228 ASP ALA ASN ILE GLU ALA TRP PRO LYS SER ALA LYS LEU SEQRES 15 B 228 LEU LYS SER LYS TYR GLY LYS ALA LYS LEU VAL VAL PRO SEQRES 16 B 228 SER HIS SER GLU VAL GLY ASP ALA SER LEU LEU LYS LEU SEQRES 17 B 228 THR LEU GLU GLN ALA VAL LYS GLY LEU ASN GLU SER LYS SEQRES 18 B 228 LYS PRO SER LYS PRO SER ASN HET X8Z A 300 14 HET SO4 A 400 5 HET SO4 A 401 5 HET SO4 A 402 5 HET ZN A 501 1 HET ZN A 502 1 HET ZN B 501 1 HET ZN B 502 1 HETNAM X8Z L-CAPTOPRIL HETNAM SO4 SULFATE ION HETNAM ZN ZINC ION FORMUL 3 X8Z C9 H15 N O3 S FORMUL 4 SO4 3(O4 S 2-) FORMUL 7 ZN 4(ZN 2+) FORMUL 11 HOH *160(H2 O) HELIX 1 1 THR A 70 ARG A 84 1 15 HELIX 2 2 HIS A 97 GLY A 102 1 6 HELIX 3 3 GLY A 103 ARG A 110 1 8 HELIX 4 4 GLU A 118 ASP A 127 1 10 HELIX 5 5 CYS A 176 ILE A 178 5 3 HELIX 6 6 ALA A 193 GLY A 206 1 14 HELIX 7 7 ALA A 221 LYS A 239 1 19 HELIX 8 8 THR B 70 GLU B 83 1 14 HELIX 9 9 HIS B 97 GLY B 102 1 6 HELIX 10 10 GLY B 103 ARG B 110 1 8 HELIX 11 11 SER B 117 GLY B 128 1 12 HELIX 12 12 CYS B 176 ILE B 178 5 3 HELIX 13 13 ALA B 193 TYR B 205 1 13 HELIX 14 14 ALA B 221 SER B 238 1 18 SHEET 1 AA 7 LYS A 26 ASP A 31 0 SHEET 2 AA 7 VAL A 34 VAL A 43 -1 O VAL A 34 N LEU A 30 SHEET 3 AA 7 GLY A 47 VAL A 58 -1 O GLY A 47 N VAL A 43 SHEET 4 AA 7 GLU A 61 ILE A 65 -1 O GLU A 61 N VAL A 58 SHEET 5 AA 7 LYS A 87 ILE A 92 1 O LYS A 87 N ALA A 62 SHEET 6 AA 7 THR A 114 SER A 117 1 N TYR A 115 O SER A 91 SHEET 7 AA 7 ASN A 134 PHE A 136 1 O ASN A 134 N ALA A 116 SHEET 1 AB 5 ASN A 140 VAL A 144 0 SHEET 2 AB 5 ILE A 148 PHE A 151 -1 O ILE A 148 N VAL A 144 SHEET 3 AB 5 VAL A 163 LEU A 166 -1 O VAL A 163 N PHE A 151 SHEET 4 AB 5 ILE A 171 GLY A 175 -1 O ILE A 171 N LEU A 166 SHEET 5 AB 5 LEU A 210 PRO A 213 1 O LEU A 210 N LEU A 172 SHEET 1 BA 6 LYS B 26 ASP B 31 0 SHEET 2 BA 6 VAL B 34 VAL B 43 -1 O VAL B 34 N LEU B 30 SHEET 3 BA 6 GLY B 47 VAL B 58 -1 O GLY B 47 N VAL B 43 SHEET 4 BA 6 GLU B 61 ILE B 65 -1 O GLU B 61 N VAL B 58 SHEET 5 BA 6 LYS B 87 ILE B 92 1 O LYS B 87 N ALA B 62 SHEET 6 BA 6 THR B 114 TYR B 115 1 N TYR B 115 O SER B 91 SHEET 1 BB 5 ASN B 140 VAL B 144 0 SHEET 2 BB 5 ILE B 148 PHE B 151 -1 O ILE B 148 N VAL B 144 SHEET 3 BB 5 VAL B 163 TRP B 165 -1 O VAL B 163 N PHE B 151 SHEET 4 BB 5 ILE B 171 GLY B 175 -1 O PHE B 173 N VAL B 164 SHEET 5 BB 5 LEU B 210 PRO B 213 1 O LEU B 210 N LEU B 172 LINK NE2 HIS A 95 ZN ZN A 501 1555 1555 2.20 LINK ND1 HIS A 97 ZN ZN A 501 1555 1555 2.24 LINK OD2 ASP A 99 ZN ZN A 502 1555 1555 2.02 LINK NE2 HIS A 157 ZN ZN A 501 1555 1555 2.02 LINK SG CYS A 176 ZN ZN A 502 1555 1555 2.40 LINK NE2 HIS A 215 ZN ZN A 502 1555 1555 1.97 LINK S X8Z A 300 ZN ZN A 501 1555 1555 2.25 LINK S X8Z A 300 ZN ZN A 502 1555 1555 2.22 LINK NE2 HIS B 95 ZN ZN B 502 1555 1555 2.10 LINK ND1 HIS B 97 ZN ZN B 502 1555 1555 1.97 LINK OD2 ASP B 99 ZN ZN B 501 1555 1555 1.77 LINK NE2 HIS B 157 ZN ZN B 502 1555 1555 1.92 LINK NE2 HIS B 215 ZN ZN B 501 1555 1555 2.07 LINK ZN ZN B 502 O HOH B2004 1555 1555 2.65 SITE 1 AC1 9 TRP A 46 ASP A 99 HIS A 157 LYS A 179 SITE 2 AC1 9 ASN A 185 HIS A 215 ZN A 501 ZN A 502 SITE 3 AC1 9 HOH A2061 SITE 1 AC2 5 TYR A 35 ARG A 84 TYR A 86 LYS A 170 SITE 2 AC2 5 HOH A2119 SITE 1 AC3 6 VAL A 56 LEU A 57 GLU A 168 ARG A 169 SITE 2 AC3 6 HOH A2108 HOH A2147 SITE 1 AC4 7 TRP A 80 ARG A 84 GLU A 168 ARG A 169 SITE 2 AC4 7 HOH A2045 HOH A2148 HOH A2149 SITE 1 AC5 5 HIS A 95 HIS A 97 HIS A 157 X8Z A 300 SITE 2 AC5 5 ZN A 502 SITE 1 AC6 5 ASP A 99 CYS A 176 HIS A 215 X8Z A 300 SITE 2 AC6 5 ZN A 501 SITE 1 AC7 5 ASP B 99 CYS B 176 HIS B 215 ZN B 502 SITE 2 AC7 5 HOH B2004 SITE 1 AC8 6 HIS B 95 HIS B 97 HIS B 157 CYS B 176 SITE 2 AC8 6 ZN B 501 HOH B2004 CRYST1 193.620 49.910 54.620 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005165 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020036 0.000000 0.00000 SCALE3 0.000000 0.000000 0.018308 0.00000