HEADER LYASE 16-AUG-13 4C24 TITLE L-FUCULOSE 1-PHOSPHATE ALDOLASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: L-FUCULOSE PHOSPHATE ALDOLASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: L-FUCULOSE 1-PHOSPHATE ALDOLASE; COMPND 5 EC: 4.1.2.17; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOCOCCUS PNEUMONIAE; SOURCE 3 ORGANISM_TAXID: 170187; SOURCE 4 STRAIN: TIGR4; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET28 KEYWDS LYASE, FUCOSE PROCESSING EXPDTA X-RAY DIFFRACTION AUTHOR M.A.HIGGINS,M.D.L.SUITS,C.MARSTERS,A.B.BORASTON REVDAT 4 20-DEC-23 4C24 1 REMARK LINK REVDAT 3 19-MAR-14 4C24 1 JRNL REVDAT 2 08-JAN-14 4C24 1 JRNL REVDAT 1 11-DEC-13 4C24 0 JRNL AUTH M.A.HIGGINS,M.D.SUITS,C.MARSTERS,A.B.BORASTON JRNL TITL STRUCTURAL AND FUNCTIONAL ANALYSIS OF FUCOSE-PROCESSING JRNL TITL 2 ENZYMES FROM STREPTOCOCCUS PNEUMONIAE. JRNL REF J.MOL.BIOL. V. 426 1469 2014 JRNL REFN ISSN 0022-2836 JRNL PMID 24333485 JRNL DOI 10.1016/J.JMB.2013.12.006 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.72 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 39302 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.141 REMARK 3 R VALUE (WORKING SET) : 0.140 REMARK 3 FREE R VALUE : 0.161 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 2157 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2831 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.17 REMARK 3 BIN R VALUE (WORKING SET) : 0.1630 REMARK 3 BIN FREE R VALUE SET COUNT : 155 REMARK 3 BIN FREE R VALUE : 0.2280 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1607 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 102 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.27 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -9.65000 REMARK 3 B22 (A**2) : -9.65000 REMARK 3 B33 (A**2) : 19.30000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.013 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.011 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.028 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.537 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.969 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1720 ; 0.010 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2346 ; 1.351 ; 1.974 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 232 ; 5.176 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 72 ;37.693 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 299 ;13.833 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 7 ;12.610 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 276 ; 0.088 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1279 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 1720 ; 3.383 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 29 ;25.296 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 1760 ;11.564 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TWIN DETAILS REMARK 3 NUMBER OF TWIN DOMAINS : 2 REMARK 3 TWIN DOMAIN : 1 REMARK 3 TWIN OPERATOR : H, K, L REMARK 3 TWIN FRACTION : 0.755 REMARK 3 TWIN DOMAIN : 2 REMARK 3 TWIN OPERATOR : K, H, -L REMARK 3 TWIN FRACTION : 0.245 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT. U REMARK 3 VALUES REFINED INDIVIDUALLY REMARK 4 REMARK 4 4C24 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 16-AUG-13. REMARK 100 THE DEPOSITION ID IS D_1290058053. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 01-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97950 REMARK 200 MONOCHROMATOR : LIQUID NITROGEN-COOLED DOUBLE REMARK 200 CRYSTAL REMARK 200 OPTICS : RH COATED REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XIA2 REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41479 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 36.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.05000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 20.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.6 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.48000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 9.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2FUA REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: SPFCSA AT A CONCENTRATION OF 14 MG PER REMARK 280 ML, BUFFERED IN 20 MM TRIS-HCL (PH 8.0) AND 5 MM DITHIOTHREITOL REMARK 280 (DTT) WAS CRYSTALLIZED BY MIXING EQUAL VOLUMES WITH A SOLUTION REMARK 280 OF 4% (V PER V) GLYCEROL, 1.50 M AMMONIUM SULPHATE, 100 MM TRIS- REMARK 280 HCL (PH 8.5) AND 8 MM ZINC CHLORIDE REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 4 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -Y,X,Z REMARK 290 4555 Y,-X,Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -Y+1/2,X+1/2,Z+1/2 REMARK 290 8555 Y+1/2,-X+1/2,Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 56.48500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 56.48500 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 20.45250 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 56.48500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 56.48500 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 20.45250 REMARK 290 SMTRY1 7 0.000000 -1.000000 0.000000 56.48500 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 56.48500 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 20.45250 REMARK 290 SMTRY1 8 0.000000 1.000000 0.000000 56.48500 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 56.48500 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 20.45250 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 11990 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32040 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -386.2 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT2 3 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT3 4 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 THR A 207 REMARK 465 TYR A 208 REMARK 465 GLY A 209 REMARK 465 GLN A 210 REMARK 465 ARG A 211 REMARK 465 LYS A 212 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 3 CG OD1 OD2 REMARK 470 LYS A 14 CG CD CE NZ REMARK 470 LYS A 22 CG CD CE NZ REMARK 470 GLU A 34 CG CD OE1 OE2 REMARK 470 GLU A 127 CG CD OE1 OE2 REMARK 470 GLU A 135 CG CD OE1 OE2 REMARK 470 GLN A 162 CG CD OE1 NE2 REMARK 470 GLU A 199 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A -3 5.66 -163.67 REMARK 500 SER A 72 139.11 -37.58 REMARK 500 THR A 97 -77.89 -90.25 REMARK 500 HIS A 155 -68.74 -146.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NI A 302 NI REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A -4 N REMARK 620 2 SER A -3 N 82.7 REMARK 620 3 HIS A -2 ND1 98.3 179.0 REMARK 620 4 HIS A -2 N 154.0 82.6 96.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 301 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 25 O REMARK 620 2 HIS A 93 NE2 81.0 REMARK 620 3 HIS A 95 NE2 86.1 105.1 REMARK 620 4 HIS A 155 NE2 175.9 96.0 97.5 REMARK 620 5 HOH A2018 O 78.1 117.8 130.7 100.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NI A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1207 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1208 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE EDO A 1209 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1210 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4C20 RELATED DB: PDB REMARK 900 L-FUCOSE ISOMERASE REMARK 900 RELATED ID: 4C21 RELATED DB: PDB REMARK 900 L-FUCOSE ISOMERASE IN COMPLEX WITH FUCITOL REMARK 900 RELATED ID: 4C22 RELATED DB: PDB REMARK 900 L-FUCOSE ISOMERASE IN COMPLEX WITH FUCULOSE REMARK 900 RELATED ID: 4C23 RELATED DB: PDB REMARK 900 L-FUCULOSE KINASE REMARK 900 RELATED ID: 4C25 RELATED DB: PDB REMARK 900 L-FUCULOSE 1-PHOSPHATE ALDOLASE REMARK 999 REMARK 999 SEQUENCE REMARK 999 POLYPEPTIDE INCLUDES A PORTION OF THE PRECEDING N-TERMINAL REMARK 999 AFFINITY TAG DBREF 4C24 A 2 212 UNP Q04I08 Q04I08_STRP2 2 212 SEQADV 4C24 GLY A -4 UNP Q04I08 EXPRESSION TAG SEQADV 4C24 SER A -3 UNP Q04I08 EXPRESSION TAG SEQADV 4C24 HIS A -2 UNP Q04I08 EXPRESSION TAG SEQADV 4C24 MET A -1 UNP Q04I08 EXPRESSION TAG SEQADV 4C24 ALA A 0 UNP Q04I08 EXPRESSION TAG SEQADV 4C24 SER A 1 UNP Q04I08 EXPRESSION TAG SEQRES 1 A 217 GLY SER HIS MET ALA SER SER ASP VAL LYS GLN GLU LEU SEQRES 2 A 217 ILE LYS TYR GLY LYS LYS LEU VAL GLU THR ASP LEU THR SEQRES 3 A 217 LYS GLY THR GLY GLY ASN LEU SER VAL PHE ASP ARG GLU SEQRES 4 A 217 LYS GLN LEU MET ALA ILE THR PRO SER GLY ILE ASP PHE SEQRES 5 A 217 PHE GLU ILE LYS GLU SER ASP ILE VAL VAL MET ASP ILE SEQRES 6 A 217 ASN GLY ASN VAL VAL GLU GLY GLU ARG LEU PRO SER SER SEQRES 7 A 217 GLU TRP TYR MET HIS LEU ILE GLN TYR GLN THR ARG ASP SEQRES 8 A 217 ASP ILE ASP ALA ILE ILE HIS ALA HIS THR THR TYR ALA SEQRES 9 A 217 THR VAL LEU ALA CYS LEU ARG GLU PRO LEU PRO ALA SER SEQRES 10 A 217 HIS TYR MET ILE ALA VAL ALA GLY LYS ASP VAL ARG VAL SEQRES 11 A 217 ALA GLU TYR ALA THR TYR GLY THR LYS GLU LEU ALA VAL SEQRES 12 A 217 ASN ALA ALA LYS ALA MET GLU GLY ARG ARG ALA VAL LEU SEQRES 13 A 217 LEU ALA ASN HIS GLY ILE LEU ALA GLY ALA GLN ASN LEU SEQRES 14 A 217 LEU ASN ALA PHE ASN ILE VAL GLU GLU VAL GLU TYR CYS SEQRES 15 A 217 ALA LYS ILE TYR CYS LEU ALA LYS ASN PHE GLY GLU PRO SEQRES 16 A 217 VAL VAL LEU PRO ASP GLU GLU MET GLU LEU MET ALA GLU SEQRES 17 A 217 LYS PHE LYS THR TYR GLY GLN ARG LYS HET ZN A 301 1 HET NI A 302 1 HET SO4 A1207 5 HET SO4 A1208 5 HET EDO A1209 4 HET GOL A1210 6 HETNAM ZN ZINC ION HETNAM NI NICKEL (II) ION HETNAM SO4 SULFATE ION HETNAM EDO 1,2-ETHANEDIOL HETNAM GOL GLYCEROL HETSYN EDO ETHYLENE GLYCOL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 ZN ZN 2+ FORMUL 3 NI NI 2+ FORMUL 4 SO4 2(O4 S 2-) FORMUL 6 EDO C2 H6 O2 FORMUL 7 GOL C3 H8 O3 FORMUL 8 HOH *102(H2 O) HELIX 1 1 SER A 1 THR A 18 1 18 HELIX 2 2 ASP A 46 ILE A 50 5 5 HELIX 3 3 LYS A 51 ILE A 55 5 5 HELIX 4 4 GLU A 74 ARG A 85 1 12 HELIX 5 5 THR A 97 ARG A 106 1 10 HELIX 6 6 HIS A 113 ALA A 119 5 7 HELIX 7 7 THR A 133 GLU A 145 1 13 HELIX 8 8 ASN A 163 GLY A 188 1 26 HELIX 9 9 PRO A 194 LYS A 206 1 13 SHEET 1 AA 8 VAL A 64 GLU A 66 0 SHEET 2 AA 8 VAL A 56 ASP A 59 -1 O VAL A 57 N VAL A 65 SHEET 3 AA 8 LEU A 37 ILE A 40 -1 O MET A 38 N MET A 58 SHEET 4 AA 8 ASN A 27 ASP A 32 -1 O VAL A 30 N ALA A 39 SHEET 5 AA 8 ALA A 90 ALA A 94 -1 O ILE A 91 N SER A 29 SHEET 6 AA 8 GLY A 156 ALA A 161 -1 O ILE A 157 N ALA A 94 SHEET 7 AA 8 ALA A 149 LEU A 152 -1 O VAL A 150 N LEU A 158 SHEET 8 AA 8 VAL A 125 ALA A 126 1 N ALA A 126 O LEU A 151 LINK N GLY A -4 NI NI A 302 1555 1555 2.05 LINK N SER A -3 NI NI A 302 1555 1555 1.87 LINK ND1 HIS A -2 NI NI A 302 1555 1555 1.91 LINK N HIS A -2 NI NI A 302 1555 1555 1.96 LINK O GLY A 25 ZN ZN A 301 1555 1555 2.61 LINK NE2 HIS A 93 ZN ZN A 301 1555 1555 1.99 LINK NE2 HIS A 95 ZN ZN A 301 1555 1555 2.00 LINK NE2 HIS A 155 ZN ZN A 301 1555 1555 2.00 LINK ZN ZN A 301 O HOH A2018 1555 1555 2.09 SITE 1 AC1 6 GLY A 25 HIS A 93 HIS A 95 TYR A 114 SITE 2 AC1 6 HIS A 155 HOH A2018 SITE 1 AC2 3 GLY A -4 HIS A -2 SER A -3 SITE 1 AC3 5 THR A 97 TYR A 98 LYS A 179 HOH A2048 SITE 2 AC3 5 HOH A2084 SITE 1 AC4 9 GLY A 25 GLY A 26 ASN A 27 SER A 43 SITE 2 AC4 9 GLY A 44 SER A 72 SER A 73 HOH A2017 SITE 3 AC4 9 HOH A2019 SITE 1 AC5 3 LYS A 121 ARG A 124 ARG A 147 SITE 1 AC6 5 THR A 133 LYS A 134 GLU A 135 HOH A2100 SITE 2 AC6 5 HOH A2101 CRYST1 112.970 112.970 40.905 90.00 90.00 90.00 I 4 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008852 0.000000 0.000000 0.00000 SCALE2 0.000000 0.008852 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024447 0.00000