HEADER ISOMERASE 09-SEP-13 4C4T TITLE STRUCTURE OF BETA-PHOSPHOGLUCOMUTASE IN COMPLEX WITH A PHOSPHONATE TITLE 2 ANALOGUE OF BETA-GLUCOSE-1-PHOSPHATE AND ALUMINIUM TETRAFLUORIDE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BETA-PHOSPHOGLUCOMUTASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: BETA-PGM; COMPND 5 EC: 5.4.2.6; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LACTOCOCCUS LACTIS; SOURCE 3 ORGANISM_TAXID: 1358; SOURCE 4 ATCC: 19435; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET20A KEYWDS ISOMERASE, PHOSPHORYL TRANSFER, TRANSITION STATE, METAL FLUORIDE, KEYWDS 2 MUTASE EXPDTA X-RAY DIFFRACTION AUTHOR E.PELLEGRINI,M.W.BOWLER REVDAT 5 20-DEC-23 4C4T 1 HETSYN REVDAT 4 29-JUL-20 4C4T 1 COMPND REMARK HETNAM LINK REVDAT 4 2 1 SITE REVDAT 3 10-SEP-14 4C4T 1 JRNL REVDAT 2 20-AUG-14 4C4T 1 JRNL REVDAT 1 16-JUL-14 4C4T 0 JRNL AUTH Y.JIN,D.BHATTASALI,E.PELLEGRINI,S.M.FORGET,N.J.BAXTER, JRNL AUTH 2 M.J.CLIFF,M.W.BOWLER,D.L.JAKEMAN,G.M.BLACKBURN,J.P.WALTHO JRNL TITL ALPHA-FLUOROPHOSPHONATES REVEAL HOW A PHOSPHOMUTASE JRNL TITL 2 CONSERVES TRANSITION STATE CONFORMATION OVER HEXOSE JRNL TITL 3 RECOGNITION IN ITS TWO-STEP REACTION. JRNL REF PROC.NATL.ACAD.SCI.USA V. 111 12384 2014 JRNL REFN ISSN 0027-8424 JRNL PMID 25104750 JRNL DOI 10.1073/PNAS.1402850111 REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.17 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 33970 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.161 REMARK 3 R VALUE (WORKING SET) : 0.159 REMARK 3 FREE R VALUE : 0.199 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1712 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 48.1967 - 3.4338 1.00 2908 172 0.1576 0.1970 REMARK 3 2 3.4338 - 2.7256 1.00 2809 137 0.1465 0.1863 REMARK 3 3 2.7256 - 2.3811 0.99 2744 162 0.1415 0.1673 REMARK 3 4 2.3811 - 2.1634 0.99 2722 150 0.1358 0.1656 REMARK 3 5 2.1634 - 2.0083 0.99 2710 156 0.1420 0.1702 REMARK 3 6 2.0083 - 1.8899 0.99 2732 124 0.1469 0.1995 REMARK 3 7 1.8899 - 1.7952 0.98 2657 160 0.1555 0.2145 REMARK 3 8 1.7952 - 1.7171 0.99 2708 119 0.1689 0.2274 REMARK 3 9 1.7171 - 1.6510 0.98 2648 151 0.1835 0.2328 REMARK 3 10 1.6510 - 1.5940 0.98 2651 143 0.1988 0.2682 REMARK 3 11 1.5940 - 1.5442 0.96 2572 129 0.2418 0.3052 REMARK 3 12 1.5442 - 1.5000 0.88 2397 109 0.2530 0.3180 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.73 REMARK 3 K_SOL : 0.35 REMARK 3 B_SOL : 44.23 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 17.910 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 10.74 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.70 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.50970 REMARK 3 B22 (A**2) : -3.94920 REMARK 3 B33 (A**2) : 1.43950 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.015 1735 REMARK 3 ANGLE : 1.391 2367 REMARK 3 CHIRALITY : 0.113 268 REMARK 3 PLANARITY : 0.007 303 REMARK 3 DIHEDRAL : 12.453 634 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4C4T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 09-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1290058277. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : C001 REMARK 200 OPTICS : TOROIDAL MIRROR REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 34022 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 52.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 4.200 REMARK 200 R MERGE (I) : 0.09000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 12.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.1 REMARK 200 DATA REDUNDANCY IN SHELL : 3.40 REMARK 200 R MERGE FOR SHELL (I) : 0.60000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2WF5 REMARK 200 REMARK 200 REMARK: DATA WERE COLLECTED USING THE GROB ROBOT GONIMETER REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.15 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.20 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 27-32% PEG 4000, 50-75 MM MAGNESIUM REMARK 280 ACETATE, PH 7.2 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.59550 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.24800 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 27.14200 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.24800 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.59550 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 27.14200 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 218 REMARK 465 LYS A 219 REMARK 465 GLN A 220 REMARK 465 LYS A 221 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 144 CB OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE2 GLU A 71 O HOH A 2234 1.62 REMARK 500 O HOH A 2173 O HOH A 2351 1.64 REMARK 500 OE1 GLU A 71 O HOH A 2233 1.68 REMARK 500 NH2 ARG A 75 O HOH A 2233 1.74 REMARK 500 OE2 GLU A 50 O HOH A 2161 1.81 REMARK 500 O HOH A 2109 O HOH A 2285 1.90 REMARK 500 O HOH A 2174 O HOH A 2350 2.00 REMARK 500 NZ LYS A 3 O HOH A 2005 2.01 REMARK 500 O HOH A 2382 O HOH A 2383 2.01 REMARK 500 O ILE A 31 NZ LYS A 62 2.03 REMARK 500 O HOH A 2026 O HOH A 2099 2.07 REMARK 500 O HOH A 2109 O HOH A 2289 2.07 REMARK 500 O HOH A 2095 O HOH A 2269 2.09 REMARK 500 O HOH A 2128 O HOH A 2316 2.10 REMARK 500 O HOH A 2383 O HOH A 2391 2.14 REMARK 500 O HOH A 2004 O HOH A 2007 2.16 REMARK 500 OE2 GLU A 50 O HOH A 2160 2.16 REMARK 500 OD1 ASP A 197 O HOH A 2407 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2299 O HOH A 2420 4455 1.84 REMARK 500 O HOH A 2301 O HOH A 2426 4455 1.90 REMARK 500 O HOH A 2027 O HOH A 2236 1545 2.01 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LEU A 9 -65.30 -105.10 REMARK 500 VAL A 12 -53.68 -122.40 REMARK 500 ASP A 15 34.02 -85.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2027 DISTANCE = 6.33 ANGSTROMS REMARK 525 HOH A2084 DISTANCE = 6.02 ANGSTROMS REMARK 525 HOH A2085 DISTANCE = 6.56 ANGSTROMS REMARK 525 HOH A2087 DISTANCE = 5.98 ANGSTROMS REMARK 525 HOH A2122 DISTANCE = 6.30 ANGSTROMS REMARK 525 HOH A2145 DISTANCE = 6.11 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ALF A1219 AL REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 8 OD1 REMARK 620 2 ALF A1219 F1 88.4 REMARK 620 3 ALF A1219 F2 91.5 92.9 REMARK 620 4 ALF A1219 F3 88.5 89.8 177.3 REMARK 620 5 ALF A1219 F4 92.9 177.1 89.7 87.6 REMARK 620 6 GRX A1218 O6 174.8 87.1 86.1 94.2 91.7 REMARK 620 7 MG A2833 MG 70.9 104.0 24.0 154.5 78.9 107.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A2833 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 8 OD2 REMARK 620 2 ASP A 10 O 90.4 REMARK 620 3 ASP A 170 OD1 87.6 88.7 REMARK 620 4 ALF A1219 F2 89.1 93.3 176.1 REMARK 620 5 HOH A2014 O 88.1 176.9 88.5 89.4 REMARK 620 6 HOH A2016 O 175.5 87.3 88.5 94.9 94.0 REMARK 620 N 1 2 3 4 5 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4C4R RELATED DB: PDB REMARK 900 STRUCTURE OF BETA-PHOSPHOGLUCOMUTASE IN COMPLEX WITH A PHOSPHONATE REMARK 900 ANALOGUE OF BETA-GLUCOSE-1-PHOSPHATE AND MAGNESIUM TRIFLUORIDE REMARK 900 RELATED ID: 4C4S RELATED DB: PDB REMARK 900 STRUCTURE OF BETA-PHOSPHOGLUCOMUTASE IN COMPLEX WITH AN ALPHA- REMARK 900 FLUOROPHOSPHONATE ANALOGUE OF BETA-GLUCOSE-1- PHOSPHATE AND REMARK 900 MAGNESIUM TRIFLUORIDE DBREF 4C4T A 1 221 UNP P71447 PGMB_LACLA 1 221 SEQADV 4C4T ARG A 125 UNP P71447 LYS 125 CONFLICT SEQADV 4C4T HIS A 206 UNP P71447 TYR 206 CONFLICT SEQRES 1 A 221 MET PHE LYS ALA VAL LEU PHE ASP LEU ASP GLY VAL ILE SEQRES 2 A 221 THR ASP THR ALA GLU TYR HIS PHE ARG ALA TRP LYS ALA SEQRES 3 A 221 LEU ALA GLU GLU ILE GLY ILE ASN GLY VAL ASP ARG GLN SEQRES 4 A 221 PHE ASN GLU GLN LEU LYS GLY VAL SER ARG GLU ASP SER SEQRES 5 A 221 LEU GLN LYS ILE LEU ASP LEU ALA ASP LYS LYS VAL SER SEQRES 6 A 221 ALA GLU GLU PHE LYS GLU LEU ALA LYS ARG LYS ASN ASP SEQRES 7 A 221 ASN TYR VAL LYS MET ILE GLN ASP VAL SER PRO ALA ASP SEQRES 8 A 221 VAL TYR PRO GLY ILE LEU GLN LEU LEU LYS ASP LEU ARG SEQRES 9 A 221 SER ASN LYS ILE LYS ILE ALA LEU ALA SER ALA SER LYS SEQRES 10 A 221 ASN GLY PRO PHE LEU LEU GLU ARG MET ASN LEU THR GLY SEQRES 11 A 221 TYR PHE ASP ALA ILE ALA ASP PRO ALA GLU VAL ALA ALA SEQRES 12 A 221 SER LYS PRO ALA PRO ASP ILE PHE ILE ALA ALA ALA HIS SEQRES 13 A 221 ALA VAL GLY VAL ALA PRO SER GLU SER ILE GLY LEU GLU SEQRES 14 A 221 ASP SER GLN ALA GLY ILE GLN ALA ILE LYS ASP SER GLY SEQRES 15 A 221 ALA LEU PRO ILE GLY VAL GLY ARG PRO GLU ASP LEU GLY SEQRES 16 A 221 ASP ASP ILE VAL ILE VAL PRO ASP THR SER HIS TYR THR SEQRES 17 A 221 LEU GLU PHE LEU LYS GLU VAL TRP LEU GLN LYS GLN LYS HET GRX A1218 17 HET ALF A1219 5 HET MG A2833 1 HETNAM GRX (1R)-1,5-ANHYDRO-1-[(S)-FLUORO(PHOSPHONO)METHYL]-D- HETNAM 2 GRX GLUCITOL HETNAM ALF TETRAFLUOROALUMINATE ION HETNAM MG MAGNESIUM ION HETSYN GRX (S)-1-BETA-PHOSPHONOFLUOROMETHYLENE-1-DEOXY-D- HETSYN 2 GRX GLUCOPYRANOSE FORMUL 2 GRX C7 H14 F O8 P FORMUL 3 ALF AL F4 1- FORMUL 4 MG MG 2+ FORMUL 5 HOH *440(H2 O) HELIX 1 1 ASP A 15 ILE A 31 1 17 HELIX 2 2 ASP A 37 GLU A 42 1 6 HELIX 3 3 SER A 48 ALA A 60 1 13 HELIX 4 4 SER A 65 ILE A 84 1 20 HELIX 5 5 SER A 88 ASP A 91 5 4 HELIX 6 6 GLY A 95 ASN A 106 1 12 HELIX 7 7 ASN A 118 MET A 126 1 9 HELIX 8 8 LEU A 128 PHE A 132 5 5 HELIX 9 9 PRO A 148 VAL A 158 1 11 HELIX 10 10 ALA A 161 SER A 163 5 3 HELIX 11 11 SER A 171 GLY A 182 1 12 HELIX 12 12 ARG A 190 GLY A 195 1 6 HELIX 13 13 ASP A 203 TYR A 207 5 5 HELIX 14 14 THR A 208 LEU A 217 1 10 SHEET 1 AA 6 ALA A 134 ILE A 135 0 SHEET 2 AA 6 LYS A 109 LEU A 112 1 N LEU A 112 O ALA A 134 SHEET 3 AA 6 ALA A 4 PHE A 7 1 O VAL A 5 N ALA A 111 SHEET 4 AA 6 SER A 165 GLU A 169 1 O ILE A 166 N LEU A 6 SHEET 5 AA 6 LEU A 184 VAL A 188 1 O LEU A 184 N GLY A 167 SHEET 6 AA 6 VAL A 199 VAL A 201 1 O VAL A 199 N GLY A 187 LINK OD1 ASP A 8 AL ALF A1219 1555 1555 1.92 LINK OD2 ASP A 8 MG MG A2833 1555 1555 2.02 LINK O ASP A 10 MG MG A2833 1555 1555 2.08 LINK OD1 ASP A 170 MG MG A2833 1555 1555 1.99 LINK O6 GRX A1218 AL ALF A1219 1555 1555 1.99 LINK F2 ALF A1219 MG MG A2833 1555 1555 1.95 LINK AL ALF A1219 MG MG A2833 1555 1555 3.45 LINK O HOH A2014 MG MG A2833 1555 1555 2.01 LINK O HOH A2016 MG MG A2833 1555 1555 2.11 CISPEP 1 LYS A 145 PRO A 146 0 12.96 CRYST1 37.191 54.284 104.496 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026888 0.000000 0.000000 0.00000 SCALE2 0.000000 0.018422 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009570 0.00000