HEADER IMMUNE SYSTEM 19-SEP-13 4C6S TITLE CRYSTAL STRUCTURE OF THE TIR DOMAIN FROM THE ARABIDOPSIS THALIANA TITLE 2 DISEASE RESISTANCE PROTEIN RRS1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROBABLE WRKY TRANSCRIPTION FACTOR 52; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: TOLL/INTERLEUKIN-1 RECEPTOR DOMAIN, RESIDUES 7-153; COMPND 5 SYNONYM: DISEASE RESISTANCE PROTEIN RRS1, DISEASE RESISTANCE PROTEIN COMPND 6 SLH1, PROTEIN SENSITIVE TO LOW HUMIDITY 1, RESISTANCE TO RALSTONIA COMPND 7 SOLANACEARUM 1 PROTEIN, WRKY DNA-BINDING PROTEIN 52; COMPND 8 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_TAXID: 3702; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS IMMUNE SYSTEM, PLANT TIR DOMAIN, SIGNAL TRANSDUCTION EXPDTA X-RAY DIFFRACTION AUTHOR L.WAN,S.J.WILLIAMS,K.H.SOHN,M.BERNOUX,Y.MA,C.SEGONZAC,T.VE,P.SARRIS, AUTHOR 2 D.J.ERICSSON,S.B.SAUCET,X.ZHANG,J.PARKER,P.N.DODDS,J.D.G.JONES, AUTHOR 3 B.KOBE REVDAT 2 01-MAY-24 4C6S 1 REMARK LINK REVDAT 1 28-MAY-14 4C6S 0 JRNL AUTH S.J.WILLIAMS,K.H.SOHN,L.WAN,M.BERNOUX,P.F.SARRIS,C.SEGONZAC, JRNL AUTH 2 T.VE,Y.MA,S.B.SAUCET,D.J.ERICSSON,L.W.CASEY,T.LONHIENNE, JRNL AUTH 3 D.J.WINZOR,X.ZHANG,A.COERDT,J.E.PARKER,P.N.DODDS,B.KOBE, JRNL AUTH 4 J.D.G.JONES JRNL TITL STRUCTURAL BASIS FOR ASSEMBLY AND FUNCTION OF A JRNL TITL 2 HETERODIMERIC PLANT IMMUNE RECEPTOR. JRNL REF SCIENCE V. 344 299 2014 JRNL REFN ISSN 0036-8075 JRNL PMID 24744375 JRNL DOI 10.1126/SCIENCE.1247357 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.2_1309 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 35.63 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 17875 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.183 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.198 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.900 REMARK 3 FREE R VALUE TEST SET COUNT : 884 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 35.6397 - 3.1804 1.00 3000 159 0.1728 0.1687 REMARK 3 2 3.1804 - 2.5246 1.00 2850 143 0.1871 0.2098 REMARK 3 3 2.5246 - 2.2055 1.00 2825 146 0.1798 0.2227 REMARK 3 4 2.2055 - 2.0039 1.00 2794 136 0.1815 0.2441 REMARK 3 5 2.0039 - 1.8603 1.00 2752 162 0.1979 0.2148 REMARK 3 6 1.8603 - 1.7506 1.00 2770 138 0.2345 0.2394 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.160 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.880 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 26.28 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.007 1186 REMARK 3 ANGLE : 1.067 1600 REMARK 3 CHIRALITY : 0.074 179 REMARK 3 PLANARITY : 0.004 203 REMARK 3 DIHEDRAL : 14.087 438 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN A AND (RESID 8 THROUGH 15 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.6677 49.0786 65.9457 REMARK 3 T TENSOR REMARK 3 T11: 0.2171 T22: 0.3697 REMARK 3 T33: 0.3358 T12: 0.0181 REMARK 3 T13: 0.0655 T23: 0.0402 REMARK 3 L TENSOR REMARK 3 L11: 4.3304 L22: 6.0467 REMARK 3 L33: 3.0373 L12: -4.6031 REMARK 3 L13: -2.8809 L23: 3.1312 REMARK 3 S TENSOR REMARK 3 S11: -0.3553 S12: 0.0218 S13: 0.5434 REMARK 3 S21: 0.0063 S22: 0.2728 S23: -0.9336 REMARK 3 S31: -0.2549 S32: 0.4742 S33: 0.1834 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN A AND (RESID 16 THROUGH 22 ) REMARK 3 ORIGIN FOR THE GROUP (A): 18.8052 59.9884 75.7545 REMARK 3 T TENSOR REMARK 3 T11: 0.3144 T22: 0.2247 REMARK 3 T33: 0.3076 T12: 0.0055 REMARK 3 T13: -0.0086 T23: 0.0374 REMARK 3 L TENSOR REMARK 3 L11: 3.7965 L22: 8.2144 REMARK 3 L33: 3.2864 L12: 1.9004 REMARK 3 L13: 3.1680 L23: -0.0944 REMARK 3 S TENSOR REMARK 3 S11: -0.0613 S12: 0.5043 S13: 0.7785 REMARK 3 S21: -0.2531 S22: -0.2323 S23: -0.0705 REMARK 3 S31: -1.1584 S32: 0.3271 S33: 0.2071 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN A AND (RESID 23 THROUGH 34 ) REMARK 3 ORIGIN FOR THE GROUP (A): 25.1101 47.9354 77.5068 REMARK 3 T TENSOR REMARK 3 T11: 0.1631 T22: 0.2362 REMARK 3 T33: 0.2144 T12: -0.0039 REMARK 3 T13: -0.0116 T23: 0.0070 REMARK 3 L TENSOR REMARK 3 L11: 6.0702 L22: 5.1734 REMARK 3 L33: 8.9102 L12: -5.3625 REMARK 3 L13: -6.8901 L23: 6.7678 REMARK 3 S TENSOR REMARK 3 S11: -0.1517 S12: -0.1457 S13: -0.0343 REMARK 3 S21: 0.3013 S22: 0.2447 S23: -0.4470 REMARK 3 S31: 0.2652 S32: 0.5396 S33: -0.0853 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN A AND (RESID 35 THROUGH 46 ) REMARK 3 ORIGIN FOR THE GROUP (A): 23.8022 56.1010 68.1836 REMARK 3 T TENSOR REMARK 3 T11: 0.1647 T22: 0.3150 REMARK 3 T33: 0.2917 T12: -0.0530 REMARK 3 T13: 0.0399 T23: 0.0950 REMARK 3 L TENSOR REMARK 3 L11: 5.0879 L22: 1.6233 REMARK 3 L33: 4.2577 L12: 2.0016 REMARK 3 L13: -0.3300 L23: 1.7653 REMARK 3 S TENSOR REMARK 3 S11: -0.1037 S12: 0.5988 S13: 1.1018 REMARK 3 S21: -0.4352 S22: -0.2211 S23: -1.0411 REMARK 3 S31: -0.4586 S32: 0.2386 S33: 0.2458 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN A AND (RESID 47 THROUGH 68 ) REMARK 3 ORIGIN FOR THE GROUP (A): 21.8913 56.1857 61.9024 REMARK 3 T TENSOR REMARK 3 T11: 0.2913 T22: 0.4790 REMARK 3 T33: 0.3061 T12: 0.0118 REMARK 3 T13: 0.0465 T23: 0.1260 REMARK 3 L TENSOR REMARK 3 L11: 4.2352 L22: 1.8677 REMARK 3 L33: 4.9930 L12: 1.6513 REMARK 3 L13: -2.0099 L23: 0.1802 REMARK 3 S TENSOR REMARK 3 S11: -0.0419 S12: 0.9330 S13: 0.5564 REMARK 3 S21: -0.3698 S22: 0.1479 S23: -0.2372 REMARK 3 S31: -0.3603 S32: 0.2740 S33: -0.1763 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN A AND (RESID 69 THROUGH 81 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.9346 58.7797 66.1426 REMARK 3 T TENSOR REMARK 3 T11: 0.2705 T22: 0.2840 REMARK 3 T33: 0.3467 T12: 0.0266 REMARK 3 T13: -0.0629 T23: 0.0505 REMARK 3 L TENSOR REMARK 3 L11: 6.2792 L22: 5.4554 REMARK 3 L33: 2.4777 L12: 0.8642 REMARK 3 L13: -2.3457 L23: -3.1324 REMARK 3 S TENSOR REMARK 3 S11: -0.2079 S12: 0.3755 S13: 0.8375 REMARK 3 S21: -0.1153 S22: 0.3008 S23: 0.2111 REMARK 3 S31: -0.5354 S32: -0.2209 S33: -0.0920 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN A AND (RESID 82 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 17.2398 52.7362 55.9449 REMARK 3 T TENSOR REMARK 3 T11: 0.5577 T22: 0.8347 REMARK 3 T33: 0.2988 T12: 0.0264 REMARK 3 T13: 0.0753 T23: 0.1471 REMARK 3 L TENSOR REMARK 3 L11: 7.6871 L22: 2.0125 REMARK 3 L33: 7.7549 L12: 6.2676 REMARK 3 L13: 6.9962 L23: 2.9895 REMARK 3 S TENSOR REMARK 3 S11: 0.1400 S12: 1.4744 S13: -0.4937 REMARK 3 S21: -1.3966 S22: 0.2753 S23: -1.4193 REMARK 3 S31: 0.9024 S32: 1.8708 S33: 0.1377 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN A AND (RESID 91 THROUGH 101 ) REMARK 3 ORIGIN FOR THE GROUP (A): 16.4456 46.3662 64.0965 REMARK 3 T TENSOR REMARK 3 T11: 0.2709 T22: 0.2764 REMARK 3 T33: 0.1990 T12: -0.0221 REMARK 3 T13: 0.0566 T23: -0.0193 REMARK 3 L TENSOR REMARK 3 L11: 6.5434 L22: 4.9585 REMARK 3 L33: 7.7747 L12: -0.7783 REMARK 3 L13: -0.1719 L23: -0.3303 REMARK 3 S TENSOR REMARK 3 S11: 0.0566 S12: 0.9288 S13: -0.1750 REMARK 3 S21: -0.9044 S22: 0.0399 S23: -0.3798 REMARK 3 S31: 0.1117 S32: 0.0418 S33: -0.0091 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN A AND (RESID 102 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): 5.4919 47.9182 71.2918 REMARK 3 T TENSOR REMARK 3 T11: 0.1598 T22: 0.3023 REMARK 3 T33: 0.1941 T12: 0.0059 REMARK 3 T13: 0.0261 T23: 0.0067 REMARK 3 L TENSOR REMARK 3 L11: 3.6417 L22: 1.6184 REMARK 3 L33: 4.1820 L12: -0.4457 REMARK 3 L13: 2.8955 L23: -1.1407 REMARK 3 S TENSOR REMARK 3 S11: -0.0534 S12: -0.2620 S13: -0.1794 REMARK 3 S21: 0.0653 S22: 0.1623 S23: 0.1370 REMARK 3 S31: 0.1120 S32: -0.6039 S33: -0.1021 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN A AND (RESID 131 THROUGH 149 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.4988 39.1329 73.6286 REMARK 3 T TENSOR REMARK 3 T11: 0.2351 T22: 0.1762 REMARK 3 T33: 0.2321 T12: 0.0225 REMARK 3 T13: 0.0320 T23: -0.0127 REMARK 3 L TENSOR REMARK 3 L11: 7.7934 L22: 6.4249 REMARK 3 L33: 6.3065 L12: -3.3294 REMARK 3 L13: -4.6477 L23: 2.5884 REMARK 3 S TENSOR REMARK 3 S11: -0.2694 S12: 0.4019 S13: -0.5244 REMARK 3 S21: -0.1223 S22: 0.0502 S23: -0.0885 REMARK 3 S31: 0.7381 S32: 0.1059 S33: 0.2154 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4C6S COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-SEP-13. REMARK 100 THE DEPOSITION ID IS D_1290058324. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 29-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9537,1.3776 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 17927 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.750 REMARK 200 RESOLUTION RANGE LOW (A) : 71.240 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.700 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 14.00 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.78 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 11.30 REMARK 200 R MERGE FOR SHELL (I) : 1.50000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER, AUTOSOL IN REMARK 200 STARTING MODEL: RPS4 TIR REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 50.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.49 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.8M AMMONIUM SULPHATE, 0.1M BIS-TRIS REMARK 280 PH 7.0 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 33.36200 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 35.63250 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 35.63250 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 50.04300 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 35.63250 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 35.63250 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 16.68100 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 35.63250 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 35.63250 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 50.04300 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 35.63250 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 35.63250 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 16.68100 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 33.36200 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4060 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14390 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -149.3 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 71.26500 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 71.26500 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 166.81000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2004 LIES ON A SPECIAL POSITION. REMARK 375 HOH A2055 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 4 REMARK 465 ASN A 5 REMARK 465 ALA A 6 REMARK 465 ASP A 7 REMARK 465 GLY A 150 REMARK 465 ARG A 151 REMARK 465 ILE A 152 REMARK 465 GLY A 153 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 22 -106.35 -112.09 REMARK 500 ASN A 91 80.69 -171.07 REMARK 500 SER A 104 61.69 -154.77 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1156 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 29 OE1 REMARK 620 2 HOH A2010 O 117.4 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A1155 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 123 ND1 REMARK 620 2 GLU A 137 OE1 138.8 REMARK 620 3 SO4 A1154 O1 107.4 107.6 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1150 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1151 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1152 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1153 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1154 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1155 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1156 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4C6R RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE TIR DOMAIN FROM THE ARABIDOPSIS THALIANA REMARK 900 DISEASE RESISTANCE PROTEIN RPS4 REMARK 900 RELATED ID: 4C6T RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE RPS4 AND RRS1 TIR DOMAIN HETERODIMER DBREF 4C6S A 7 153 UNP Q9FH83 WRK52_ARATH 7 153 SEQADV 4C6S SER A 4 UNP Q9FH83 EXPRESSION TAG SEQADV 4C6S ASN A 5 UNP Q9FH83 EXPRESSION TAG SEQADV 4C6S ALA A 6 UNP Q9FH83 EXPRESSION TAG SEQRES 1 A 150 SER ASN ALA ASP GLU GLU PHE VAL CYS ILE SER CYS VAL SEQRES 2 A 150 GLU GLU VAL ARG TYR SER PHE VAL SER HIS LEU SER GLU SEQRES 3 A 150 ALA LEU ARG ARG LYS GLY ILE ASN ASN VAL VAL VAL ASP SEQRES 4 A 150 VAL ASP ILE ASP ASP LEU LEU PHE LYS GLU SER GLN ALA SEQRES 5 A 150 LYS ILE GLU LYS ALA GLY VAL SER VAL MET VAL LEU PRO SEQRES 6 A 150 GLY ASN CYS ASP PRO SER GLU VAL TRP LEU ASP LYS PHE SEQRES 7 A 150 ALA LYS VAL LEU GLU CYS GLN ARG ASN ASN LYS ASP GLN SEQRES 8 A 150 ALA VAL VAL SER VAL LEU TYR GLY ASP SER LEU LEU ARG SEQRES 9 A 150 ASP GLN TRP LEU SER GLU LEU ASP PHE ARG GLY LEU SER SEQRES 10 A 150 ARG ILE HIS GLN SER ARG LYS GLU CYS SER ASP SER ILE SEQRES 11 A 150 LEU VAL GLU GLU ILE VAL ARG ASP VAL TYR GLU THR HIS SEQRES 12 A 150 PHE TYR VAL GLY ARG ILE GLY HET GOL A1150 6 HET GOL A1151 6 HET SO4 A1152 5 HET SO4 A1153 5 HET SO4 A1154 5 HET NA A1155 1 HET NA A1156 1 HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETNAM NA SODIUM ION HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL 2(C3 H8 O3) FORMUL 4 SO4 3(O4 S 2-) FORMUL 7 NA 2(NA 1+) FORMUL 9 HOH *55(H2 O) HELIX 1 1 VAL A 16 TYR A 21 1 6 HELIX 2 2 SER A 22 LYS A 34 1 13 HELIX 3 3 ASP A 46 GLU A 52 1 7 HELIX 4 4 SER A 53 ALA A 60 1 8 HELIX 5 5 ASP A 72 GLU A 75 5 4 HELIX 6 6 VAL A 76 PHE A 81 1 6 HELIX 7 7 PHE A 81 GLU A 86 1 6 HELIX 8 8 CYS A 87 ASN A 91 5 5 HELIX 9 9 LEU A 106 ARG A 117 1 12 HELIX 10 10 SER A 130 PHE A 147 1 18 SHEET 1 AA 5 ASN A 38 ASP A 42 0 SHEET 2 AA 5 VAL A 11 CYS A 15 1 O VAL A 11 N VAL A 39 SHEET 3 AA 5 VAL A 62 PRO A 68 1 O VAL A 62 N CYS A 12 SHEET 4 AA 5 ALA A 95 TYR A 101 1 O ALA A 95 N SER A 63 SHEET 5 AA 5 ILE A 122 GLN A 124 1 O HIS A 123 N LEU A 100 LINK OE1 GLU A 29 NA NA A1156 1555 1555 2.40 LINK ND1 HIS A 123 NA NA A1155 1555 1555 2.72 LINK OE1 GLU A 137 NA NA A1155 1555 1555 2.58 LINK O1 SO4 A1154 NA NA A1155 1555 1555 2.71 LINK NA NA A1156 O HOH A2010 1555 1555 3.09 SITE 1 AC1 8 TYR A 21 TYR A 101 ASP A 103 SER A 125 SITE 2 AC1 8 ARG A 126 CYS A 129 ASP A 131 HOH A2045 SITE 1 AC2 2 PHE A 147 VAL A 149 SITE 1 AC3 7 VAL A 19 PRO A 68 GLY A 69 ASN A 70 SITE 2 AC3 7 TYR A 101 HOH A2024 HOH A2035 SITE 1 AC4 3 ARG A 107 ARG A 126 LYS A 127 SITE 1 AC5 4 HIS A 123 GLN A 124 ARG A 126 NA A1155 SITE 1 AC6 3 HIS A 123 GLU A 137 SO4 A1154 SITE 1 AC7 3 GLU A 29 GLN A 109 HOH A2010 CRYST1 71.265 71.265 66.724 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014032 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014032 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014987 0.00000